F323374

General Info

Members Datasets Scaffolds Average Seq Length
212 139 212 248

Family's Representative Sequence

Representative Sequence 3300050492|nmdc:mga0yw44_64808_c1|nmdc:mga0yw44_64808_c1_433_1287
Length 284
Sequence MTLLQVDDIGVRFGGVLALDGLSFAIQPDHICALIGPNGAGKTTMFNVISRLYLPTIGKVTFDGNDLLAMAPHQIARAGIARTFQNLALVPGLTVLDNVMIGAHTKAKGGFTASMLRLPPVGSEEKRLKAEAFELLDRLGLAALAPRPCAGLPYGTLKRIEIARAMASKPRLLMLDEPAAGLTHGEVDELGEMIQQLRTDFDLTVLLIEHHMSMVMAISDWVVVLDVGRKISEGAPALVRDDPKVIAAYLGAPTEAAAEAVVQDVTGHSIGAPPAADAAREGSA

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
38 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
65 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
66 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
67 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
71 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
75 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
76 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
77 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
88 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
91 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
92 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
97 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.53
Metatranscriptomes 0.47
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.25
Nodule 0
Rhizoplane 5.66
Rhizosphere 89.15
Stem 0
Stem Tuber 0
Unclassified 0.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10002802 3300003373 Bacteria 4147
2 Ga0070658_10035303 3300005327 Bacteria 4027
3 Ga0070683_100023601 3300005329 Bacteria 5503
4 Ga0070680_100081682 3300005336 Bacteria 2666
5 Ga0070660_100008650 3300005339 Bacteria 7129
6 Ga0070661_100066541 3300005344 Bacteria 2647
7 Ga0070671_100260962 3300005355 Bacteria 1472
8 Ga0070709_10094613 3300005434 Bacteria 1977
9 Ga0070714_100409783 3300005435 Bacteria 1283
10 Ga0070708_100536217 3300005445 Bacteria 1104
11 Ga0070678_100379878 3300005456 Bacteria 1222
12 Ga0070681_10022404 3300005458 Bacteria 6343
13 Ga0070681_10051980 3300005458 Bacteria 4086
14 Ga0070707_100291842 3300005468 Bacteria 1585
15 Ga0070679_100021157 3300005530 Bacteria 6346
16 Ga0070679_100087300 3300005530 Bacteria 3106
17 Ga0070679_100240712 3300005530 Bacteria 1767
18 Ga0070684_100007913 3300005535 Bacteria 8294
19 Ga0081455_10006453 3300005937 Bacteria 12566
20 Ga0081455_10073324 3300005937 Bacteria 2831
21 Ga0081455_10217944 3300005937 Bacteria 1417
22 Ga0081538_10000195 3300005981 Bacteria 66942
23 Ga0081538_10000244 3300005981 Bacteria 61457
24 Ga0081538_10000529 3300005981 Bacteria 42265
25 Ga0081538_10000906 3300005981 Bacteria 32046
26 Ga0081538_10003083 3300005981 Bacteria 15854
27 Ga0081539_10013081 3300005985 Bacteria 6291
28 Ga0075365_10094785 3300006038 Bacteria 2038
29 Ga0075368_10079116 3300006042 Bacteria 1336
30 Ga0075364_10002132 3300006051 Bacteria 11074
31 Ga0075432_10030769 3300006058 Bacteria 1856
32 Ga0070712_100646117 3300006175 Bacteria 898
33 Ga0075367_10127288 3300006178 Bacteria 1573
34 Ga0075370_10132241 3300006353 Bacteria 1456
35 Ga0075428_100002428 3300006844 Bacteria 20239
36 Ga0075428_100113827 3300006844 Bacteria 2948
37 Ga0075428_100233278 3300006844 Bacteria 1986
38 Ga0075430_100061452 3300006846 Bacteria 3156
39 Ga0075431_100013214 3300006847 Bacteria 8341
40 Ga0075431_100026583 3300006847 Bacteria 5938
41 Ga0075431_100038445 3300006847 Bacteria 4927
42 Ga0075431_100186426 3300006847 Bacteria 2127
43 Ga0075434_100170988 3300006871 Bacteria 2193
44 Ga0075429_100004066 3300006880 Bacteria 12537
45 Ga0075429_100090373 3300006880 Bacteria 2670
46 Ga0075429_100472270 3300006880 Bacteria 1099
47 Ga0111539_10037538 3300009094 Bacteria 5848
48 Ga0111539_10566793 3300009094 Bacteria 1323
49 Ga0114129_10020506 3300009147 Bacteria 9401
50 Ga0114129_10025323 3300009147 Bacteria 8407
51 Ga0114129_10467286 3300009147 Bacteria 1652
52 Ga0114129_10746504 3300009147 Bacteria 1253
53 Ga0105241_10572303 3300009174 Bacteria 1017
54 Ga0105242_10232800 3300009176 Bacteria 1652
55 Ga0157370_10011371 3300013104 Bacteria 9319
56 Ga0157372_10172455 3300013307 Bacteria 2503
57 Ga0182007_10013035 3300015262 Bacteria 3185
58 Ga0206356_11722378 3300020070 Bacteria 1640
59 Ga0207705_10095040 3300025909 Bacteria 2187
60 Ga0207707_10072498 3300025912 Bacteria 3002
61 Ga0207660_10064165 3300025917 Bacteria 2650
62 Ga0207657_10000955 3300025919 Bacteria 30552
63 Ga0207649_10051051 3300025920 Bacteria 2560
64 Ga0207652_10123239 3300025921 Bacteria 2308
65 Ga0207652_10318081 3300025921 Bacteria 1405
66 Ga0207661_10109279 3300025944 Bacteria 2336
67 Ga0207667_10504346 3300025949 Bacteria 1227
68 Ga0207428_10082187 3300027907 Bacteria 2514
69 Ga0207428_10172438 3300027907 Bacteria 1638
70 Ga0265338_10178626 3300028800 Bacteria 1621
71 Ga0316576_10033507 3300031727 Bacteria 3657
72 Ga0316576_10130616 3300031727 Bacteria 1890
73 Ga0316576_10260527 3300031727 Bacteria 1301
74 Ga0307405_10364258 3300031731 Bacteria 1120
75 Ga0307410_10026172 3300031852 Bacteria 3669
76 Ga0307406_10037728 3300031901 Bacteria 2987
77 Ga0307407_10025570 3300031903 Bacteria 3113
78 Ga0307412_10445609 3300031911 Bacteria 1065
79 Ga0307416_100060998 3300032002 Bacteria 3075
80 Ga0307411_10078362 3300032005 Bacteria 2265
81 Ga0307415_100017736 3300032126 Bacteria 4275
82 Ga0395899_0034475 3300037312 Bacteria 3801
83 Ga0395899_0245507 3300037312 Bacteria 1230
84 Ga0395900_0010224 3300037418 Bacteria 9596
85 Ga0395900_0067326 3300037418 Bacteria 3679
86 Ga0395900_0090484 3300037418 Bacteria 3145
87 Ga0395900_0091984 3300037418 Bacteria 3116
88 Ga0395900_0098437 3300037418 Bacteria 3005
89 Ga0395900_0231672 3300037418 Bacteria 1857
90 Ga0395900_0296276 3300037418 Bacteria 1605
91 Ga0395900_0302065 3300037418 Bacteria 1586
92 Ga0395900_0371795 3300037418 Bacteria 1399
93 Ga0395898_0044597 3300037466 Bacteria 4362
94 Ga0395898_0177980 3300037466 Bacteria 2033
95 Ga0395898_0267778 3300037466 Bacteria 1629
96 Ga0395898_0356747 3300037466 Bacteria 1394
97 Ga0395905_0050963 3300037471 Bacteria 3877
98 Ga0395905_0276083 3300037471 Bacteria 1566
99 Ga0395905_0351540 3300037471 Bacteria 1366
100 Ga0395905_0373011 3300037471 Bacteria 1320
101 Ga0395905_0589671 3300037471 Bacteria 1013
102 Ga0436364_1188769 3300037853 Unclassified 4798
103 Ga0395901_0009865 3300038443 Bacteria 9679
104 Ga0395901_0033462 3300038443 Bacteria 5306
105 Ga0395901_0079733 3300038443 Bacteria 3418
106 Ga0395901_0104898 3300038443 Bacteria 2966
107 Ga0395901_0371400 3300038443 Bacteria 1473
108 Ga0395901_0902350 3300038443 Bacteria 865
109 Ga0451802_0807329 3300041460 Bacteria 1161
110 Ga0450922_002972 3300042124 Bacteria 1567
111 Ga0450888_012069 3300042126 Bacteria 1020
112 Ga0466969_0126997 3300044656 Bacteria 1184
113 Ga0466961_0174250 3300044693 Bacteria 1337
114 Ga0466963_0210988 3300044694 Bacteria 1359
115 Ga0466957_0198752 3300044842 Bacteria 1316
116 Ga0466957_0348238 3300044842 Bacteria 1005
117 Ga0466958_0017386 3300045836 Bacteria 4156
118 Ga0466967_0029599 3300045976 Bacteria 4585
119 Ga0466967_0104671 3300045976 Bacteria 2591
120 Ga0495651_0005402 3300046462 Bacteria 9750
121 Ga0495605_0069041 3300046474 Bacteria 1674
122 Ga0495662_0081095 3300046476 Bacteria 1578
123 Ga0495584_0143202 3300046491 Bacteria 1214
124 Ga0495608_0001922 3300046511 Bacteria 14905
125 Ga0495628_0178164 3300046516 Bacteria 1609
126 Ga0495630_0015982 3300046517 Bacteria 5484
127 Ga0495663_0040760 3300046525 Bacteria 1411
128 Ga0495652_0030637 3300046529 Bacteria 4716
129 Ga0495640_0001210 3300046533 Bacteria 20182
130 Ga0495645_0199565 3300046543 Bacteria 1358
131 Ga0495633_0110759 3300046558 Bacteria 1273
132 Ga0495667_0045497 3300046559 Bacteria 2906
133 Ga0495634_0102525 3300046642 Bacteria 1848
134 Ga0495600_0125840 3300046809 Bacteria 1667
135 Ga0495604_0016597 3300047317 Bacteria 5888
136 Ga0495674_0001271 3300047319 Bacteria 24493
137 Ga0495672_0001495 3300047320 Bacteria 22913
138 Ga0495680_0001616 3300047322 Bacteria 23967
139 Ga0495683_0149022 3300047323 Bacteria 1091
140 Ga0495684_0052317 3300047471 Bacteria 3117
141 Ga0496100_0075504 3300048903 Bacteria 2260
142 Ga0496102_0113541 3300048905 Bacteria 2527
143 Ga0496103_0104490 3300048906 Bacteria 1795
144 Ga0496105_0089852 3300048908 Bacteria 2537
145 Ga0496106_0011835 3300048909 Bacteria 6440
146 Ga0496107_0093981 3300048910 Bacteria 2193
147 Ga0496109_0408349 3300048912 Bacteria 1283
148 Ga0496112_0073727 3300048915 Bacteria 3374
149 Ga0496112_0329208 3300048915 Bacteria 1471
150 Ga0496114_0030422 3300048917 Bacteria 4442
151 Ga0496115_0097558 3300048918 Bacteria 2407
152 Ga0496126_0002352 3300048929 Bacteria 25842
153 Ga0501032_0014003 3300049569 Bacteria 5690
154 Ga0501033_0542906 3300049570 Bacteria 801
155 Ga0501034_0000366 3300049571 Bacteria 77097
156 Ga0501034_0031538 3300049571 Bacteria 5383
157 Ga0501034_0110763 3300049571 Bacteria 2736
158 Ga0501034_0194690 3300049571 Bacteria 1988
159 Ga0501036_0056202 3300049572 Bacteria 3334
160 Ga0501036_0097804 3300049572 Bacteria 2481
161 Ga0501037_0001635 3300049573 Bacteria 16286
162 Ga0501037_0051363 3300049573 Bacteria 3016
163 Ga0501038_0086930 3300049574 Bacteria 2626
164 Ga0501039_0108963 3300049575 Bacteria 2165
165 Ga0501039_0114462 3300049575 Bacteria 2110
166 Ga0501039_0440831 3300049575 Bacteria 1023
167 Ga0501040_0371774 3300049576 Bacteria 1025
168 Ga0501043_0014326 3300049579 Bacteria 6205
169 Ga0501068_0001082 3300049584 Bacteria 14424
170 Ga0501070_0000499 3300049586 Bacteria 35735
171 Ga0501070_0001701 3300049586 Bacteria 19495
172 Ga0501070_0382540 3300049586 Bacteria 1140
173 Ga0501072_0105921 3300049588 Bacteria 2236
174 Ga0501074_0054154 3300049590 Bacteria 2894
175 Ga0501074_0099668 3300049590 Bacteria 2080
176 Ga0501074_0414646 3300049590 Bacteria 955
177 Ga0501076_0087640 3300049592 Bacteria 2502
178 Ga0501077_0241275 3300049593 Bacteria 1149
179 Ga0501079_0135775 3300049741 Bacteria 1915
180 Ga0501079_0154142 3300049741 Bacteria 1791
181 Ga0501080_0008689 3300049742 Bacteria 9224
182 Ga0501080_0300148 3300049742 Bacteria 1457
183 Ga0501080_0423240 3300049742 Bacteria 1196
184 Ga0501081_0098996 3300049743 Bacteria 2060
185 Ga0501035_0133575 3300049822 Bacteria 2162
186 Ga0501035_0246171 3300049822 Bacteria 1519
187 Ga0501044_0001848 3300049823 Bacteria 24616
188 Ga0501044_0219809 3300049823 Bacteria 1851
189 nmdc:mga03683_59574_c1 3300050489 Bacteria 1611
190 nmdc:mga0yw44_64808_c1 3300050492 Bacteria 2249
191 nmdc:mga06z11_47565_c1 3300050494 Bacteria 2179
192 nmdc:mga07m45_118489_c1 3300050496 Bacteria 1528
193 nmdc:mga05p37_177650_c1 3300050507 Bacteria 2593
194 nmdc:mga05p37_368136_c1 3300050507 Bacteria 1688
195 nmdc:mga05p37_448938_c1 3300050507 Bacteria 1493
196 nmdc:mga09592_101555_c1 3300050508 Bacteria 1121
197 nmdc:mga09592_32355_c1 3300050508 Bacteria 4360
198 nmdc:mga09592_796_c1 3300050508 Bacteria 24402
199 nmdc:mga0qj67_258361_c1 3300050509 Bacteria 1413
200 nmdc:mga0qj67_31198_c1 3300050509 Bacteria 4151
201 nmdc:mga0qj67_44473_c1 3300050509 Bacteria 3500
202 nmdc:mga06r32_151900_c1 3300050510 Bacteria 2295
203 nmdc:mga06r32_373829_c1 3300050510 Bacteria 1408
204 nmdc:mga06r32_3985_c1 3300050510 Bacteria 13228
205 nmdc:mga08y16_90251_c1 3300050511 Bacteria 3194
206 Ga0495601_0111393 3300053077 Bacteria 1773
207 Ga0495612_0131834 3300053078 Bacteria 1080
208 Ga0495619_0077828 3300053085 Bacteria 2229
209 Ga0501082_0051432 3300060353 Bacteria 3551
210 Ga0466962_0158337 3300061719 Bacteria 1100
211 Ga0530510_0063626 3300061734 Bacteria 2671
212 Ga0530510_0160693 3300061734 Bacteria 1662

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049570 Ga0501033_0542906 Ga0501033_0542906_14_706 218
2 3300049593 Ga0501077_0241275 Ga0501077_0241275_371_1105 221
3 3300049741 Ga0501079_0135775 Ga0501079_0135775_182_916 221
4 3300049743 Ga0501081_0098996 Ga0501081_0098996_874_1608 221
5 3300061734 Ga0530510_0063626 Ga0530510_0063626_1487_2221 222
6 3300049575 Ga0501039_0108963 Ga0501039_0108963_1366_2115 226
7 3300049576 Ga0501040_0371774 Ga0501040_0371774_104_853 226
8 3300037418 Ga0395900_0231672 Ga0395900_0231672_17_703 228
9 3300049571 Ga0501034_0000366 Ga0501034_0000366_32253_33014 229
10 3300049571 Ga0501034_0194690 Ga0501034_0194690_24_716 230
11 3300049584 Ga0501068_0001082 Ga0501068_0001082_4556_5326 231
12 3300006042 Ga0075368_10079116 Ga0075368_100791162 232
13 3300006178 Ga0075367_10127288 Ga0075367_101272882 232
14 3300037418 Ga0395900_0098437 Ga0395900_0098437_1992_2696 234
15 3300048929 Ga0496126_0002352 Ga0496126_0002352_23232_23951 238
16 3300005937 Ga0081455_10217944 Ga0081455_102179442 239
17 3300037466 Ga0395898_0177980 Ga0395898_0177980_724_1443 239
18 3300037471 Ga0395905_0373011 Ga0395905_0373011_171_893 239
19 3300050510 nmdc:mga06r32_373829_c1 nmdc:mga06r32_373829_c1_436_1191 239
20 3300049572 Ga0501036_0056202 Ga0501036_0056202_2097_2903 240
21 3300049573 Ga0501037_0051363 Ga0501037_0051363_2181_2987 240
22 3300049574 Ga0501038_0086930 Ga0501038_0086930_1721_2527 240
23 3300049575 Ga0501039_0114462 Ga0501039_0114462_887_1693 240
24 3300049588 Ga0501072_0105921 Ga0501072_0105921_402_1208 240
25 3300049592 Ga0501076_0087640 Ga0501076_0087640_1487_2293 240
26 3300049741 Ga0501079_0154142 Ga0501079_0154142_988_1770 240
27 3300049742 Ga0501080_0300148 Ga0501080_0300148_450_1256 240
28 3300060353 Ga0501082_0051432 Ga0501082_0051432_2371_3177 240
29 3300005981 Ga0081538_10000244 Ga0081538_100002448 241
30 3300005981 Ga0081538_10000906 Ga0081538_100009063 241
31 3300005985 Ga0081539_10013081 Ga0081539_100130817 241
32 3300006175 Ga0070712_100646117 Ga0070712_1006461172 241
33 3300006844 Ga0075428_100002428 Ga0075428_1000024289 241
34 3300006844 Ga0075428_100233278 Ga0075428_1002332782 241
35 3300006846 Ga0075430_100061452 Ga0075430_1000614522 241
36 3300006847 Ga0075431_100013214 Ga0075431_1000132147 241
37 3300006847 Ga0075431_100026583 Ga0075431_1000265836 241
38 3300006847 Ga0075431_100038445 Ga0075431_1000384454 241
39 3300006880 Ga0075429_100004066 Ga0075429_1000040665 241
40 3300006880 Ga0075429_100090373 Ga0075429_1000903733 241
41 3300009147 Ga0114129_10020506 Ga0114129_1002050610 241
42 3300009147 Ga0114129_10025323 Ga0114129_100253236 241
43 3300031727 Ga0316576_10033507 Ga0316576_100335074 241
44 3300031727 Ga0316576_10130616 Ga0316576_101306162 241
45 3300031727 Ga0316576_10260527 Ga0316576_102605272 241
46 3300031731 Ga0307405_10364258 Ga0307405_103642581 241
47 3300031852 Ga0307410_10026172 Ga0307410_100261723 241
48 3300031903 Ga0307407_10025570 Ga0307407_100255702 241
49 3300031911 Ga0307412_10445609 Ga0307412_104456091 241
50 3300032005 Ga0307411_10078362 Ga0307411_100783622 241
51 3300032126 Ga0307415_100017736 Ga0307415_1000177362 241
52 3300037418 Ga0395900_0090484 Ga0395900_0090484_1226_2002 241
53 3300037418 Ga0395900_0296276 Ga0395900_0296276_628_1353 241
54 3300037418 Ga0395900_0371795 Ga0395900_0371795_338_1102 241
55 3300037466 Ga0395898_0356747 Ga0395898_0356747_382_1158 241
56 3300037471 Ga0395905_0050963 Ga0395905_0050963_1439_2215 241
57 3300037471 Ga0395905_0276083 Ga0395905_0276083_353_1129 241
58 3300038443 Ga0395901_0033462 Ga0395901_0033462_1072_1848 241
59 3300038443 Ga0395901_0079733 Ga0395901_0079733_1845_2621 241
60 3300038443 Ga0395901_0371400 Ga0395901_0371400_129_893 241
61 3300041460 Ga0451802_0807329 Ga0451802_0807329_379_1140 241
62 3300042124 Ga0450922_002972 Ga0450922_002972_60_824 241
63 3300044694 Ga0466963_0210988 Ga0466963_0210988_454_1179 241
64 3300049569 Ga0501032_0014003 Ga0501032_0014003_4810_5571 241
65 3300049571 Ga0501034_0031538 Ga0501034_0031538_3262_4023 241
66 3300049571 Ga0501034_0110763 Ga0501034_0110763_991_1752 241
67 3300049572 Ga0501036_0097804 Ga0501036_0097804_1084_1845 241
68 3300049573 Ga0501037_0001635 Ga0501037_0001635_7891_8652 241
69 3300049575 Ga0501039_0440831 Ga0501039_0440831_209_970 241
70 3300049579 Ga0501043_0014326 Ga0501043_0014326_2692_3453 241
71 3300049586 Ga0501070_0001701 Ga0501070_0001701_5492_6253 241
72 3300049742 Ga0501080_0008689 Ga0501080_0008689_2721_3482 241
73 3300049742 Ga0501080_0423240 Ga0501080_0423240_379_1104 241
74 3300049822 Ga0501035_0133575 Ga0501035_0133575_845_1606 241
75 3300049823 Ga0501044_0001848 Ga0501044_0001848_6975_7736 241
76 3300050507 nmdc:mga05p37_177650_c1 nmdc:mga05p37_177650_c1_44_814 241
77 3300050507 nmdc:mga05p37_448938_c1 nmdc:mga05p37_448938_c1_529_1293 241
78 3300050508 nmdc:mga09592_101555_c1 nmdc:mga09592_101555_c1_334_1104 241
79 3300050508 nmdc:mga09592_796_c1 nmdc:mga09592_796_c1_9011_9772 241
80 3300050509 nmdc:mga0qj67_258361_c1 nmdc:mga0qj67_258361_c1_544_1305 241
81 3300050509 nmdc:mga0qj67_31198_c1 nmdc:mga0qj67_31198_c1_1722_2483 241
82 3300050509 nmdc:mga0qj67_44473_c1 nmdc:mga0qj67_44473_c1_610_1380 241
83 3300050510 nmdc:mga06r32_151900_c1 nmdc:mga06r32_151900_c1_1175_1945 241
84 3300050510 nmdc:mga06r32_3985_c1 nmdc:mga06r32_3985_c1_3403_4164 241
85 3300005435 Ga0070714_100409783 Ga0070714_1004097832 242
86 3300006353 Ga0075370_10132241 Ga0075370_101322412 242
87 3300006880 Ga0075429_100472270 Ga0075429_1004722702 242
88 3300044656 Ga0466969_0126997 Ga0466969_0126997_337_1065 242
89 3300044693 Ga0466961_0174250 Ga0466961_0174250_180_908 242
90 3300045836 Ga0466958_0017386 Ga0466958_0017386_690_1418 242
91 3300047320 Ga0495672_0001495 Ga0495672_0001495_8964_9740 242
92 3300048912 Ga0496109_0408349 Ga0496109_0408349_29_781 242
93 3300050494 nmdc:mga06z11_47565_c1 nmdc:mga06z11_47565_c1_14_787 242
94 3300050496 nmdc:mga07m45_118489_c1 nmdc:mga07m45_118489_c1_606_1379 242
95 3300005445 Ga0070708_100536217 Ga0070708_1005362171 243
96 3300005456 Ga0070678_100379878 Ga0070678_1003798782 243
97 3300005458 Ga0070681_10051980 Ga0070681_100519804 243
98 3300005530 Ga0070679_100087300 Ga0070679_1000873003 243
99 3300005530 Ga0070679_100240712 Ga0070679_1002407122 243
100 3300006038 Ga0075365_10094785 Ga0075365_100947852 243
101 3300009174 Ga0105241_10572303 Ga0105241_105723032 243
102 3300025909 Ga0207705_10095040 Ga0207705_100950403 243
103 3300025921 Ga0207652_10123239 Ga0207652_101232393 243
104 3300025921 Ga0207652_10318081 Ga0207652_103180812 243
105 3300025944 Ga0207661_10109279 Ga0207661_101092793 243
106 3300037853 Ga0436364_1188769 Ga0436364_1188769_344_1144 243
107 3300046474 Ga0495605_0069041 Ga0495605_0069041_546_1277 243
108 3300048915 Ga0496112_0073727 Ga0496112_0073727_12_752 243
109 3300048915 Ga0496112_0329208 Ga0496112_0329208_729_1460 243
110 3300003373 JGI25407J50210_10002802 JGI25407J50210_100028023 244
111 3300005327 Ga0070658_10035303 Ga0070658_100353033 244
112 3300005329 Ga0070683_100023601 Ga0070683_1000236015 244
113 3300005336 Ga0070680_100081682 Ga0070680_1000816822 244
114 3300005339 Ga0070660_100008650 Ga0070660_1000086504 244
115 3300005344 Ga0070661_100066541 Ga0070661_1000665413 244
116 3300005355 Ga0070671_100260962 Ga0070671_1002609622 244
117 3300005434 Ga0070709_10094613 Ga0070709_100946132 244
118 3300005458 Ga0070681_10022404 Ga0070681_100224043 244
119 3300005468 Ga0070707_100291842 Ga0070707_1002918422 244
120 3300005530 Ga0070679_100021157 Ga0070679_1000211576 244
121 3300005535 Ga0070684_100007913 Ga0070684_1000079139 244
122 3300005937 Ga0081455_10006453 Ga0081455_100064538 244
123 3300005937 Ga0081455_10073324 Ga0081455_100733243 244
124 3300005981 Ga0081538_10000195 Ga0081538_100001954 244
125 3300005981 Ga0081538_10000529 Ga0081538_1000052925 244
126 3300005981 Ga0081538_10003083 Ga0081538_100030837 244
127 3300006051 Ga0075364_10002132 Ga0075364_100021327 244
128 3300006058 Ga0075432_10030769 Ga0075432_100307692 244
129 3300006844 Ga0075428_100113827 Ga0075428_1001138272 244
130 3300006847 Ga0075431_100186426 Ga0075431_1001864263 244
131 3300006871 Ga0075434_100170988 Ga0075434_1001709882 244
132 3300009094 Ga0111539_10037538 Ga0111539_100375381 244
133 3300009094 Ga0111539_10566793 Ga0111539_105667932 244
134 3300009147 Ga0114129_10467286 Ga0114129_104672862 244
135 3300009147 Ga0114129_10746504 Ga0114129_107465042 244
136 3300009176 Ga0105242_10232800 Ga0105242_102328001 244
137 3300013104 Ga0157370_10011371 Ga0157370_100113718 244
138 3300013307 Ga0157372_10172455 Ga0157372_101724553 244
139 3300015262 Ga0182007_10013035 Ga0182007_100130355 244
140 3300020070 Ga0206356_11722378 Ga0206356_117223783 244
141 3300025912 Ga0207707_10072498 Ga0207707_100724983 244
142 3300025917 Ga0207660_10064165 Ga0207660_100641653 244
143 3300025919 Ga0207657_10000955 Ga0207657_1000095511 244
144 3300025920 Ga0207649_10051051 Ga0207649_100510513 244
145 3300025949 Ga0207667_10504346 Ga0207667_105043462 244
146 3300027907 Ga0207428_10082187 Ga0207428_100821872 244
147 3300027907 Ga0207428_10172438 Ga0207428_101724382 244
148 3300028800 Ga0265338_10178626 Ga0265338_101786262 244
149 3300031901 Ga0307406_10037728 Ga0307406_100377282 244
150 3300032002 Ga0307416_100060998 Ga0307416_1000609983 244
151 3300037312 Ga0395899_0034475 Ga0395899_0034475_837_1571 244
152 3300037312 Ga0395899_0245507 Ga0395899_0245507_401_1135 244
153 3300037418 Ga0395900_0010224 Ga0395900_0010224_43_777 244
154 3300037418 Ga0395900_0067326 Ga0395900_0067326_28_762 244
155 3300037418 Ga0395900_0091984 Ga0395900_0091984_1093_1827 244
156 3300037418 Ga0395900_0302065 Ga0395900_0302065_479_1213 244
157 3300037466 Ga0395898_0044597 Ga0395898_0044597_2738_3472 244
158 3300037466 Ga0395898_0267778 Ga0395898_0267778_293_1027 244
159 3300037471 Ga0395905_0351540 Ga0395905_0351540_208_945 244
160 3300037471 Ga0395905_0589671 Ga0395905_0589671_30_764 244
161 3300038443 Ga0395901_0009865 Ga0395901_0009865_5219_5956 244
162 3300038443 Ga0395901_0104898 Ga0395901_0104898_151_885 244
163 3300038443 Ga0395901_0902350 Ga0395901_0902350_16_750 244
164 3300042126 Ga0450888_012069 Ga0450888_012069_170_949 244
165 3300044842 Ga0466957_0198752 Ga0466957_0198752_545_1279 244
166 3300044842 Ga0466957_0348238 Ga0466957_0348238_50_784 244
167 3300045976 Ga0466967_0029599 Ga0466967_0029599_2923_3657 244
168 3300045976 Ga0466967_0104671 Ga0466967_0104671_1368_2102 244
169 3300046462 Ga0495651_0005402 Ga0495651_0005402_40_774 244
170 3300046476 Ga0495662_0081095 Ga0495662_0081095_518_1252 244
171 3300046491 Ga0495584_0143202 Ga0495584_0143202_371_1105 244
172 3300046511 Ga0495608_0001922 Ga0495608_0001922_5152_5886 244
173 3300046516 Ga0495628_0178164 Ga0495628_0178164_555_1289 244
174 3300046517 Ga0495630_0015982 Ga0495630_0015982_2345_3079 244
175 3300046525 Ga0495663_0040760 Ga0495663_0040760_599_1333 244
176 3300046529 Ga0495652_0030637 Ga0495652_0030637_2367_3101 244
177 3300046533 Ga0495640_0001210 Ga0495640_0001210_10120_10854 244
178 3300046543 Ga0495645_0199565 Ga0495645_0199565_144_878 244
179 3300046558 Ga0495633_0110759 Ga0495633_0110759_271_1005 244
180 3300046559 Ga0495667_0045497 Ga0495667_0045497_527_1261 244
181 3300046642 Ga0495634_0102525 Ga0495634_0102525_418_1152 244
182 3300046809 Ga0495600_0125840 Ga0495600_0125840_84_818 244
183 3300047317 Ga0495604_0016597 Ga0495604_0016597_493_1227 244
184 3300047319 Ga0495674_0001271 Ga0495674_0001271_13129_13863 244
185 3300047322 Ga0495680_0001616 Ga0495680_0001616_12870_13604 244
186 3300047323 Ga0495683_0149022 Ga0495683_0149022_174_908 244
187 3300047471 Ga0495684_0052317 Ga0495684_0052317_20_754 244
188 3300048903 Ga0496100_0075504 Ga0496100_0075504_999_1733 244
189 3300048905 Ga0496102_0113541 Ga0496102_0113541_1646_2380 244
190 3300048906 Ga0496103_0104490 Ga0496103_0104490_503_1237 244
191 3300048908 Ga0496105_0089852 Ga0496105_0089852_319_1092 244
192 3300048909 Ga0496106_0011835 Ga0496106_0011835_1243_1977 244
193 3300048910 Ga0496107_0093981 Ga0496107_0093981_52_786 244
194 3300048917 Ga0496114_0030422 Ga0496114_0030422_1048_1782 244
195 3300048918 Ga0496115_0097558 Ga0496115_0097558_563_1297 244
196 3300049586 Ga0501070_0000499 Ga0501070_0000499_3885_4619 244
197 3300049586 Ga0501070_0382540 Ga0501070_0382540_282_1016 244
198 3300049590 Ga0501074_0054154 Ga0501074_0054154_1085_1819 244
199 3300049590 Ga0501074_0099668 Ga0501074_0099668_429_1163 244
200 3300049590 Ga0501074_0414646 Ga0501074_0414646_187_921 244
201 3300049822 Ga0501035_0246171 Ga0501035_0246171_663_1397 244
202 3300049823 Ga0501044_0219809 Ga0501044_0219809_555_1289 244
203 3300050489 nmdc:mga03683_59574_c1 nmdc:mga03683_59574_c1_359_1093 244
204 3300050492 nmdc:mga0yw44_64808_c1 nmdc:mga0yw44_64808_c1_433_1287 244
205 3300050507 nmdc:mga05p37_368136_c1 nmdc:mga05p37_368136_c1_306_1040 244
206 3300050508 nmdc:mga09592_32355_c1 nmdc:mga09592_32355_c1_3083_3817 244
207 3300050511 nmdc:mga08y16_90251_c1 nmdc:mga08y16_90251_c1_1983_2717 244
208 3300053077 Ga0495601_0111393 Ga0495601_0111393_198_932 244
209 3300053078 Ga0495612_0131834 Ga0495612_0131834_228_962 244
210 3300053085 Ga0495619_0077828 Ga0495619_0077828_676_1410 244
211 3300061719 Ga0466962_0158337 Ga0466962_0158337_245_979 244
212 3300061734 Ga0530510_0160693 Ga0530510_0160693_760_1542 244

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

19

180

0.97

PF12399

BCA_ABC_TP_C

Branched-chain amino acid ATP-binding cassette transporter

229

254

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4khz-assembly1.cif.gz_B crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose 0.9454 2 226
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.9417 4 237
7cad-assembly1.cif.gz_D mycobacterium smegmatis sugabc complex 0.9415 4 226
7caf-assembly1.cif.gz_C mycobacterium smegmatis lpqy-sugabc complex in the pre-translocation state 0.9396 4 226
2awo-assembly2.cif.gz_D crystal structure of the adp-mg-bound e. coli malk (crystallized with adp-mg) 0.9347 4 226
ID Description Score Start End Superfamily
af_P0A9S7_4_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9686 3 238 3.40.50.300
af_Q57554_4_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.952 3 238 3.40.50.300
af_P77795_1_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9479 2 222 3.40.50.300
af_A0A1D6Q2V7_231_304_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9474 2 66 3.40.50.300
af_P0AAI1_7_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.946 2 223 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1F9DPH1-F1-model_v4 ABC transporter domain-containing protein 0.9769 2 239 GO:0005524
GO:0005886
GO:0016887
AF-A0A7C4S8X1-F1-model_v4 ABC transporter ATP-binding protein 0.9758 2 238 GO:0005524
GO:0005886
GO:0016887
AF-A0A1V5BSI1-F1-model_v4 Lipopolysaccharide export system ATP-binding protein LptB (EC 3.6.3.-) 0.975 1 239 GO:0005304
GO:0005524
GO:0005886
GO:0015188
GO:0015192
GO:0015808
GO:0016887
GO:0042941
GO:1903805
GO:1903806
AF-A0A2V6XZG1-F1-model_v4 Branched-chain amino acid ABC transporter ATP-binding protein 0.9741 2 242 GO:0005304
GO:0005524
GO:0005886
GO:0015188
GO:0015192
GO:0015808
GO:0016887
GO:0042941
GO:1903805
GO:1903806
AF-A0A7H8GYS6-F1-model_v4 ABC transporter ATP-binding protein 0.9697 1 238 GO:0005304
GO:0005524
GO:0005886
GO:0015188
GO:0015192
GO:0015808
GO:0016887
GO:0042941
GO:1903805
GO:1903806

Feature Viewer

pLDDT pTM Quality
92.1 0.89 High
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Predicted Structure (AlphaFold2)

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