F323356

General Info

Members Datasets Scaffolds Average Seq Length
212 135 424 397

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0059845|Ga0501075_0059845_869_2263
Length 464
Sequence LTGGARGREASQSGRPPPQDGDHARERESPDRPHPAPTGAATPPCTLEDLAASPNALAPHYSRFRVAERLLLTGHSHQAWPDRAFEGQQQAWLDAAHFADDKWAPAFAKADRVRRGFARLMDDPDGAIALGHSTHDLVVKLLSALPLRARPRIVTTDGEFHSARRQLDRLAEEGIELVKVSCSPADAVGERLAKAVDDRTAIVVVSCVLFGNAHIVPGLGRVMERCEAVGAELLVDAYHALNVLDWSLRREGLERAFVTGGGYKYCQLGEGNSFLRIPPGRELRPVVTGWFSEFGMLTKRSPFASAAGDSAAGDQPAAAGADRVGYGAGADAFASATYDPTSHYRAAAVFDFFEEQGLAPAFLREVSQHQVGLLARRFDELDLDPKVVTRDRSVPIERIGGFLALQSPRAGEMRRALRERDVWIDHRGSTLRLGPAPFLSDRQIAQAVGVLAEVATRPAASPGA

Samples

Sample ID Description Type Environment
1 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
49 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
72 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
93 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
115 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
131 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
133 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
134 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
135 2895427314 Nonomuraea sp. PA05 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.58
Metatranscriptomes 0
Isolates 1.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 2.83
Rhizosphere 94.34
Stem 0
Stem Tuber 0
Unclassified 3.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501075_0059845 3300049591 Bacteria 2870
2 JGI25407J50210_10016259 3300003373 Bacteria 1926
3 Ga0070676_10058844 3300005328 Bacteria 2278
4 Ga0070683_100038368 3300005329 Bacteria 4391
5 Ga0070670_100078911 3300005331 Bacteria 2829
6 Ga0070675_100023425 3300005354 Bacteria 4937
7 Ga0070675_100089738 3300005354 Bacteria 2574
8 Ga0070675_100103478 3300005354 Unclassified 2401
9 Ga0070688_100036386 3300005365 Bacteria 2994
10 Ga0070667_100190133 3300005367 Unclassified 1818
11 Ga0070667_100253725 3300005367 Unclassified 1573
12 Ga0070714_100000471 3300005435 Bacteria 29248
13 Ga0070710_10028897 3300005437 Bacteria 2969
14 Ga0070705_100025634 3300005440 Bacteria 3199
15 Ga0070705_100108850 3300005440 Unclassified 1766
16 Ga0070708_100023171 3300005445 Bacteria 5276
17 Ga0070708_100042384 3300005445 Bacteria 3995
18 Ga0070678_100020331 3300005456 Bacteria 4353
19 Ga0070678_100123088 3300005456 Bacteria 2048
20 Ga0070681_10065871 3300005458 Bacteria 3591
21 Ga0070707_100173740 3300005468 Bacteria 2100
22 Ga0070707_100248268 3300005468 Bacteria 1732
23 Ga0070698_100035911 3300005471 Bacteria 5123
24 Ga0070698_100054466 3300005471 Bacteria 4060
25 Ga0070699_100005049 3300005518 Bacteria 11615
26 Ga0070699_100033563 3300005518 Bacteria 4434
27 Ga0070699_100098143 3300005518 Bacteria 2566
28 Ga0070697_100038416 3300005536 Bacteria 3868
29 Ga0070672_100065464 3300005543 Bacteria 2875
30 Ga0070695_100040772 3300005545 Bacteria 2941
31 Ga0070696_100040035 3300005546 Bacteria 3236
32 Ga0070696_100079729 3300005546 Bacteria 2317
33 Ga0070704_100003092 3300005549 Bacteria 9477
34 Ga0070704_100088132 3300005549 Bacteria 2305
35 Ga0068857_100058792 3300005577 Bacteria 3415
36 Ga0068859_100123210 3300005617 Bacteria 2660
37 Ga0068859_100142741 3300005617 Bacteria 2468
38 Ga0068862_100030124 3300005844 Bacteria 4572
39 Ga0081455_10076410 3300005937 Bacteria 2759
40 Ga0081538_10003308 3300005981 Bacteria 15276
41 Ga0081538_10061901 3300005981 Bacteria 2139
42 Ga0075364_10039556 3300006051 Bacteria 3057
43 Ga0075428_100043206 3300006844 Bacteria 4954
44 Ga0075428_100055639 3300006844 Bacteria 4335
45 Ga0075430_100002932 3300006846 Bacteria 14265
46 Ga0075431_100009773 3300006847 Bacteria 9633
47 Ga0075431_100119885 3300006847 Bacteria 2714
48 Ga0075433_10000099 3300006852 Bacteria 41634
49 Ga0075433_10006207 3300006852 Bacteria 9428
50 Ga0075433_10006352 3300006852 Bacteria 9342
51 Ga0075433_10026301 3300006852 Bacteria 4925
52 Ga0075433_10027375 3300006852 Bacteria 4835
53 Ga0075434_100000745 3300006871 Bacteria 25571
54 Ga0075434_100001827 3300006871 Bacteria 18379
55 Ga0075434_100003252 3300006871 Bacteria 14513
56 Ga0075434_100051020 3300006871 Bacteria 4110
57 Ga0075429_100014715 3300006880 Bacteria 6782
58 Ga0075429_100032713 3300006880 Bacteria 4520
59 Ga0075429_100156352 3300006880 Bacteria 1996
60 Ga0075429_100215247 3300006880 Bacteria 1683
61 Ga0075436_100002701 3300006914 Bacteria 12202
62 Ga0075436_100019831 3300006914 Bacteria 4611
63 Ga0097620_100123211 3300006931 Bacteria 2660
64 Ga0097620_100142747 3300006931 Bacteria 2468
65 Ga0075435_100035186 3300007076 Bacteria 3974
66 Ga0075435_100045022 3300007076 Bacteria 3536
67 Ga0075435_100131743 3300007076 Bacteria 2092
68 Ga0075435_100253994 3300007076 Bacteria 1497
69 Ga0099794_10006384 3300007265 Bacteria 4771
70 Ga0111539_10002028 3300009094 Bacteria 27050
71 Ga0111539_10002215 3300009094 Bacteria 25964
72 Ga0111539_10059961 3300009094 Bacteria 4511
73 Ga0111539_10236436 3300009094 Bacteria 2127
74 Ga0114129_10162336 3300009147 Bacteria 3051
75 Ga0114129_10198387 3300009147 Bacteria 2720
76 Ga0105242_10058288 3300009176 Bacteria 3165
77 Ga0105237_10029528 3300009545 Bacteria 5573
78 Ga0105249_10017870 3300009553 Bacteria 6301
79 Ga0163162_10040225 3300013306 Bacteria 4675
80 Ga0163162_10051003 3300013306 Bacteria 4151
81 Ga0157375_10062395 3300013308 Bacteria 3703
82 Ga0157375_10288096 3300013308 Bacteria 1805
83 Ga0157380_10015438 3300014326 Bacteria 5613
84 Ga0157379_10030750 3300014968 Bacteria 4782
85 Ga0213874_10016423 3300021377 Bacteria 1970
86 Ga0207643_10013070 3300025908 Bacteria 4489
87 Ga0207643_10094168 3300025908 Bacteria 1749
88 Ga0207671_10021010 3300025914 Bacteria 4961
89 Ga0207646_10010123 3300025922 Bacteria 9242
90 Ga0207646_10167330 3300025922 Bacteria 1985
91 Ga0207650_10019489 3300025925 Bacteria 4767
92 Ga0207664_10001641 3300025929 Bacteria 14739
93 Ga0207686_10177835 3300025934 Bacteria 1506
94 Ga0207670_10110453 3300025936 Bacteria 1981
95 Ga0207704_10071032 3300025938 Bacteria 2207
96 Ga0207691_10067195 3300025940 Unclassified 3241
97 Ga0207689_10028606 3300025942 Bacteria 4661
98 Ga0207712_10023513 3300025961 Bacteria 4068
99 Ga0207708_10100743 3300026075 Bacteria 2236
100 Ga0207641_10158978 3300026088 Unclassified 2053
101 Ga0207648_10013649 3300026089 Bacteria 7541
102 Ga0207674_10008265 3300026116 Bacteria 12054
103 Ga0207683_10021319 3300026121 Bacteria 5545
104 Ga0209588_1018087 3300027671 Bacteria 2192
105 Ga0207428_10119844 3300027907 Bacteria 2018
106 Ga0268265_10136423 3300028380 Bacteria 2048
107 Ga0307408_100020684 3300031548 Bacteria 4445
108 Ga0316576_10019803 3300031727 Bacteria 4617
109 Ga0307405_10072240 3300031731 Bacteria 2223
110 Ga0307413_10009457 3300031824 Bacteria 4667
111 Ga0307518_10062547 3300031838 Bacteria 2703
112 Ga0307410_10116209 3300031852 Bacteria 1944
113 Ga0307406_10070895 3300031901 Bacteria 2283
114 Ga0307407_10058192 3300031903 Bacteria 2246
115 Ga0307409_100011654 3300031995 Bacteria 5558
116 Ga0307416_100005352 3300032002 Bacteria 7873
117 Ga0307415_100003267 3300032126 Bacteria 8239
118 Ga0395900_0007622 3300037418 Bacteria 11176
119 Ga0395900_0139053 3300037418 Bacteria 2487
120 Ga0395898_0032616 3300037466 Bacteria 5200
121 Ga0395905_0084707 3300037471 Bacteria 2970
122 Ga0395905_0126158 3300037471 Bacteria 2407
123 Ga0395905_0180784 3300037471 Bacteria 1980
124 Ga0395901_0002256 3300038443 Bacteria 19673
125 Ga0395901_0025744 3300038443 Bacteria 6040
126 Ga0395901_0153092 3300038443 Bacteria 2422
127 Ga0395901_0247451 3300038443 Bacteria 1858
128 Ga0436361_1210980 3300039447 Bacteria 3579
129 Ga0436363_1686874 3300039450 Bacteria 1977
130 Ga0451577_0031920 3300042876 Bacteria 4749
131 Ga0451577_0072676 3300042876 Bacteria 3069
132 Ga0453683_0004217 3300044673 Bacteria 10278
133 Ga0453683_0040643 3300044673 Bacteria 2920
134 Ga0466963_0004033 3300044694 Bacteria 8496
135 Ga0466971_0026511 3300044719 Bacteria 2591
136 Ga0466968_0027508 3300044735 Bacteria 2341
137 Ga0451576_0016081 3300045051 Bacteria 8266
138 Ga0451576_0021773 3300045051 Bacteria 6958
139 Ga0451576_0229068 3300045051 Bacteria 1940
140 Ga0495582_0010636 3300046473 Bacteria 5061
141 Ga0495582_0094690 3300046473 Bacteria 1667
142 Ga0495594_0014135 3300046499 Bacteria 4180
143 Ga0495588_0008188 3300046674 Bacteria 4785
144 Ga0495658_0000893 3300046683 Bacteria 16031
145 Ga0496106_0204948 3300048909 Bacteria 1570
146 Ga0496108_0119294 3300048911 Bacteria 2262
147 Ga0496109_0376982 3300048912 Bacteria 1340
148 Ga0496111_0020370 3300048914 Bacteria 4617
149 Ga0496112_0007135 3300048915 Bacteria 9890
150 Ga0496113_0105907 3300048916 Bacteria 2184
151 Ga0501031_0014263 3300049568 Bacteria 5169
152 Ga0501033_0077765 3300049570 Bacteria 2435
153 Ga0501036_0181574 3300049572 Bacteria 1771
154 Ga0501038_0023583 3300049574 Bacteria 5499
155 Ga0501039_0036277 3300049575 Bacteria 3804
156 Ga0501039_0116401 3300049575 Bacteria 2092
157 Ga0501040_0011245 3300049576 Bacteria 5859
158 Ga0501041_0003807 3300049577 Bacteria 8688
159 Ga0501042_0004057 3300049578 Bacteria 9287
160 Ga0501046_0167814 3300049580 Bacteria 1648
161 Ga0501068_0012953 3300049584 Bacteria 4739
162 Ga0501071_0024749 3300049587 Bacteria 4199
163 Ga0501072_0021738 3300049588 Bacteria 4975
164 Ga0501074_0135163 3300049590 Bacteria 1764
165 Ga0501076_0036451 3300049592 Bacteria 3853
166 Ga0501076_0161951 3300049592 Bacteria 1823
167 Ga0501076_0198079 3300049592 Bacteria 1640
168 Ga0501077_0000625 3300049593 Bacteria 21450
169 Ga0501077_0005703 3300049593 Bacteria 7582
170 Ga0501077_0062100 3300049593 Bacteria 2371
171 Ga0501079_0070742 3300049741 Bacteria 2694
172 Ga0501079_0075252 3300049741 Bacteria 2611
173 Ga0501079_0140408 3300049741 Bacteria 1882
174 Ga0501079_0192902 3300049741 Bacteria 1590
175 Ga0501080_0061405 3300049742 Bacteria 3499
176 Ga0501080_0283218 3300049742 Bacteria 1506
177 Ga0501081_0019879 3300049743 Bacteria 4474
178 Ga0501081_0037993 3300049743 Bacteria 3287
179 Ga0501081_0082136 3300049743 Bacteria 2257
180 Ga0501081_0211513 3300049743 Bacteria 1408
181 Ga0501083_0014332 3300049744 Bacteria 5545
182 Ga0501083_0211324 3300049744 Bacteria 1265
183 Ga0501045_0010130 3300049824 Bacteria 6597
184 nmdc:mga05p37_236047_c1 3300050507 Bacteria 2201
185 nmdc:mga05p37_49280_c1 3300050507 Bacteria 5180
186 nmdc:mga05p37_85820_c1 3300050507 Bacteria 3880
187 nmdc:mga09592_50154_c1 3300050508 Bacteria 3521
188 nmdc:mga09592_50742_c1 3300050508 Bacteria 3499
189 nmdc:mga09592_72060_c2 3300050508 Bacteria 1811
190 nmdc:mga06r32_241664_c1 3300050510 Bacteria 1793
191 nmdc:mga06r32_84374_c1 3300050510 Bacteria 3096
192 nmdc:mga08y16_167562_c1 3300050511 Unclassified 2282
193 nmdc:mga08y16_209708_c1 3300050511 Bacteria 2018
194 nmdc:mga08y16_2693_c1 3300050511 Bacteria 18229
195 nmdc:mga08y16_396572_c1 3300050511 Bacteria 1413
196 nmdc:mga0n895_201441_c1 3300050512 Bacteria 2021
197 nmdc:mga0n895_3990_c1 3300050512 Bacteria 11996
198 nmdc:mga0n895_6121_c1 3300050512 Bacteria 10161
199 nmdc:mga0n895_982_c1 3300050512 Bacteria 20646
200 nmdc:mga0rr50_245137_c1 3300050513 Bacteria 1486
201 nmdc:mga08x19_214098_c1 3300050514 Bacteria 1323
202 nmdc:mga0a205_21295_c1 3300050515 Bacteria 6132
203 nmdc:mga0a205_4720_c1 3300050515 Bacteria 12233
204 nmdc:mga0a205_511_c1 3300050515 Bacteria 30432
205 Ga0501084_0001296 3300054114 Bacteria 19661
206 Ga0501084_0062921 3300054114 Bacteria 3106
207 Ga0590071_002116 3300059421 Bacteria 5065
208 Ga0590075_000949 3300059424 Bacteria 7539
209 Ga0530510_0173697 3300061734 Bacteria 1596
210 2866613831 2866612099 Bacteria 7543886
211 2873318406 2873314349 Bacteria 8512634
212 2895427876 2895427314 Bacteria 13147766
213 Ga0501075_0059845
214 JGI25407J50210_10016259
215 Ga0070676_10058844
216 Ga0070683_100038368
217 Ga0070670_100078911
218 Ga0070675_100023425
219 Ga0070675_100089738
220 Ga0070675_100103478
221 Ga0070688_100036386
222 Ga0070667_100190133
223 Ga0070667_100253725
224 Ga0070714_100000471
225 Ga0070710_10028897
226 Ga0070705_100025634
227 Ga0070705_100108850
228 Ga0070708_100023171
229 Ga0070708_100042384
230 Ga0070678_100020331
231 Ga0070678_100123088
232 Ga0070681_10065871
233 Ga0070707_100173740
234 Ga0070707_100248268
235 Ga0070698_100035911
236 Ga0070698_100054466
237 Ga0070699_100005049
238 Ga0070699_100033563
239 Ga0070699_100098143
240 Ga0070697_100038416
241 Ga0070672_100065464
242 Ga0070695_100040772
243 Ga0070696_100040035
244 Ga0070696_100079729
245 Ga0070704_100003092
246 Ga0070704_100088132
247 Ga0068857_100058792
248 Ga0068859_100123210
249 Ga0068859_100142741
250 Ga0068862_100030124
251 Ga0081455_10076410
252 Ga0081538_10003308
253 Ga0081538_10061901
254 Ga0075364_10039556
255 Ga0075428_100043206
256 Ga0075428_100055639
257 Ga0075430_100002932
258 Ga0075431_100009773
259 Ga0075431_100119885
260 Ga0075433_10000099
261 Ga0075433_10006207
262 Ga0075433_10006352
263 Ga0075433_10026301
264 Ga0075433_10027375
265 Ga0075434_100000745
266 Ga0075434_100001827
267 Ga0075434_100003252
268 Ga0075434_100051020
269 Ga0075429_100014715
270 Ga0075429_100032713
271 Ga0075429_100156352
272 Ga0075429_100215247
273 Ga0075436_100002701
274 Ga0075436_100019831
275 Ga0097620_100123211
276 Ga0097620_100142747
277 Ga0075435_100035186
278 Ga0075435_100045022
279 Ga0075435_100131743
280 Ga0075435_100253994
281 Ga0099794_10006384
282 Ga0111539_10002028
283 Ga0111539_10002215
284 Ga0111539_10059961
285 Ga0111539_10236436
286 Ga0114129_10162336
287 Ga0114129_10198387
288 Ga0105242_10058288
289 Ga0105237_10029528
290 Ga0105249_10017870
291 Ga0163162_10040225
292 Ga0163162_10051003
293 Ga0157375_10062395
294 Ga0157375_10288096
295 Ga0157380_10015438
296 Ga0157379_10030750
297 Ga0213874_10016423
298 Ga0207643_10013070
299 Ga0207643_10094168
300 Ga0207671_10021010
301 Ga0207646_10010123
302 Ga0207646_10167330
303 Ga0207650_10019489
304 Ga0207664_10001641
305 Ga0207686_10177835
306 Ga0207670_10110453
307 Ga0207704_10071032
308 Ga0207691_10067195
309 Ga0207689_10028606
310 Ga0207712_10023513
311 Ga0207708_10100743
312 Ga0207641_10158978
313 Ga0207648_10013649
314 Ga0207674_10008265
315 Ga0207683_10021319
316 Ga0209588_1018087
317 Ga0207428_10119844
318 Ga0268265_10136423
319 Ga0307408_100020684
320 Ga0316576_10019803
321 Ga0307405_10072240
322 Ga0307413_10009457
323 Ga0307518_10062547
324 Ga0307410_10116209
325 Ga0307406_10070895
326 Ga0307407_10058192
327 Ga0307409_100011654
328 Ga0307416_100005352
329 Ga0307415_100003267
330 Ga0395900_0007622
331 Ga0395900_0139053
332 Ga0395898_0032616
333 Ga0395905_0084707
334 Ga0395905_0126158
335 Ga0395905_0180784
336 Ga0395901_0002256
337 Ga0395901_0025744
338 Ga0395901_0153092
339 Ga0395901_0247451
340 Ga0436361_1210980
341 Ga0436363_1686874
342 Ga0451577_0031920
343 Ga0451577_0072676
344 Ga0453683_0004217
345 Ga0453683_0040643
346 Ga0466963_0004033
347 Ga0466971_0026511
348 Ga0466968_0027508
349 Ga0451576_0016081
350 Ga0451576_0021773
351 Ga0451576_0229068
352 Ga0495582_0010636
353 Ga0495582_0094690
354 Ga0495594_0014135
355 Ga0495588_0008188
356 Ga0495658_0000893
357 Ga0496106_0204948
358 Ga0496108_0119294
359 Ga0496109_0376982
360 Ga0496111_0020370
361 Ga0496112_0007135
362 Ga0496113_0105907
363 Ga0501031_0014263
364 Ga0501033_0077765
365 Ga0501036_0181574
366 Ga0501038_0023583
367 Ga0501039_0036277
368 Ga0501039_0116401
369 Ga0501040_0011245
370 Ga0501041_0003807
371 Ga0501042_0004057
372 Ga0501046_0167814
373 Ga0501068_0012953
374 Ga0501071_0024749
375 Ga0501072_0021738
376 Ga0501074_0135163
377 Ga0501076_0036451
378 Ga0501076_0161951
379 Ga0501076_0198079
380 Ga0501077_0000625
381 Ga0501077_0005703
382 Ga0501077_0062100
383 Ga0501079_0070742
384 Ga0501079_0075252
385 Ga0501079_0140408
386 Ga0501079_0192902
387 Ga0501080_0061405
388 Ga0501080_0283218
389 Ga0501081_0019879
390 Ga0501081_0037993
391 Ga0501081_0082136
392 Ga0501081_0211513
393 Ga0501083_0014332
394 Ga0501083_0211324
395 Ga0501045_0010130
396 nmdc:mga05p37_236047_c1
397 nmdc:mga05p37_49280_c1
398 nmdc:mga05p37_85820_c1
399 nmdc:mga09592_50154_c1
400 nmdc:mga09592_50742_c1
401 nmdc:mga09592_72060_c2
402 nmdc:mga06r32_241664_c1
403 nmdc:mga06r32_84374_c1
404 nmdc:mga08y16_167562_c1
405 nmdc:mga08y16_209708_c1
406 nmdc:mga08y16_2693_c1
407 nmdc:mga08y16_396572_c1
408 nmdc:mga0n895_201441_c1
409 nmdc:mga0n895_3990_c1
410 nmdc:mga0n895_6121_c1
411 nmdc:mga0n895_982_c1
412 nmdc:mga0rr50_245137_c1
413 nmdc:mga08x19_214098_c1
414 nmdc:mga0a205_21295_c1
415 nmdc:mga0a205_4720_c1
416 nmdc:mga0a205_511_c1
417 Ga0501084_0001296
418 Ga0501084_0062921
419 Ga0590071_002116
420 Ga0590075_000949
421 Ga0530510_0173697
422 2866613831
423 2873318406
424 2895427876

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
1n2t-assembly1.cif.gz_B c-des mutant k223a with gly covalenty linked to the plp-cofactor 0.8607 16 392
1qz9-assembly1.cif.gz_A-2 the three dimensional structure of kynureninase from pseudomonas fluorescens 0.8571 6 399
1elu-assembly1.cif.gz_B complex between the cystine c-s lyase c-des and its reaction product cysteine persulfide. 0.8473 18 392
6c9e-assembly1.cif.gz_A crystal structure of cysteine desulfurase from legionella pneumophila philadelphia 1 0.8438 12 397
6kg1-assembly1.cif.gz_A nifs from helicobacter pylori, soaked with l-cysteine for 180 sec 0.843 25 397
ID Description Score Start End Superfamily
af_Q4DQ63_347_462_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8834 306 390 3.90.1150.10
af_Q16719_352_459_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8669 306 393 3.90.1150.10
af_Q54Q04_346_448_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8515 292 390 3.90.1150.10
af_Q10089_37_288_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8509 41 289 3.40.640.10
af_Q60358_310_394_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8465 306 393 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7Y5FQ69-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9787 2 396 GO:0008483
AF-A0A2V7LKD8-F1-model_v4 Kynureninase 0.9776 2 351
AF-A0A2V7QI07-F1-model_v4 Kynureninase 0.9711 81 402 GO:0005737
GO:0006569
GO:0009435
GO:0030170
GO:0030429
AF-A0A6I7QAK0-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.969 6 396 GO:0005737
GO:0006569
GO:0009435
GO:0030170
GO:0030429
AF-A0A2V8H124-F1-model_v4 Kynureninase 0.9681 111 394 GO:0005737
GO:0006569
GO:0009435
GO:0030170
GO:0030429

Map