F323168

General Info

Members Datasets Scaffolds Average Seq Length
212 127 424 229

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0325707|Ga0466961_0325707_49_873
Length 274
Sequence VSGAVLPHPATGEPFPSPVPPGTGWPGDPADGETPVARTAAQVRRLAARAELDQLDARISVCRACPRLVAWREEVAAVKRAAFAHEEYWGRPLPGFGDPDARIIVLGLAPAAHGGNRTGRIFTGDRSGDWLFAALWRVGLANQPESVSREDGLTLSDCFVAAAVRCAPPANRPSPCERDHCLPYFARELELLARARVIVCLGGFAWDAALRVLRDQGAEVPRPRPRFGHGTEVSTGGFTLLGCYHVSQQNTFTGRLTEPMLDAVFARARELAGT

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
56 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
57 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
58 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
61 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
64 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
67 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
68 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
70 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
81 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
87 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
90 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
127 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.94
Nodule 0
Rhizoplane 7.08
Rhizosphere 79.25
Stem 0
Stem Tuber 0
Unclassified 0.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0325707 3300044693 Bacteria 937
2 Ga0070683_100157591 3300005329 Bacteria 2153
3 Ga0070690_100190264 3300005330 Bacteria 1422
4 Ga0070680_100456344 3300005336 Bacteria 1092
5 Ga0068868_100016646 3300005338 Bacteria 5467
6 Ga0070674_100046096 3300005356 Bacteria 2981
7 Ga0070714_100088802 3300005435 Bacteria 2705
8 Ga0070714_100437415 3300005435 Bacteria 1241
9 Ga0070714_100841394 3300005435 Bacteria 890
10 Ga0070711_100003039 3300005439 Bacteria 9700
11 Ga0070708_100380396 3300005445 Bacteria 1331
12 Ga0070678_100013085 3300005456 Bacteria 5187
13 Ga0070678_100081409 3300005456 Bacteria 2454
14 Ga0070681_10005117 3300005458 Bacteria 12655
15 Ga0070681_10503816 3300005458 Bacteria 1124
16 Ga0070706_100217351 3300005467 Bacteria 1784
17 Ga0070707_100019595 3300005468 Bacteria 6374
18 Ga0070707_100743275 3300005468 Bacteria 944
19 Ga0070684_100405320 3300005535 Bacteria 1257
20 Ga0068853_100769332 3300005539 Bacteria 921
21 Ga0070672_100524997 3300005543 Bacteria 1026
22 Ga0070686_100067926 3300005544 Bacteria 2324
23 Ga0070665_100168349 3300005548 Bacteria 2193
24 Ga0068854_100042833 3300005578 Bacteria 3206
25 Ga0070712_100000243 3300006175 Bacteria 30680
26 Ga0070712_100294216 3300006175 Bacteria 1312
27 Ga0070712_100394312 3300006175 Bacteria 1142
28 Ga0075428_100006246 3300006844 Bacteria 13244
29 Ga0075428_101117131 3300006844 Bacteria 832
30 Ga0111539_10031850 3300009094 Bacteria 6405
31 Ga0105245_10005047 3300009098 Bacteria 11608
32 Ga0105245_10029400 3300009098 Bacteria 4854
33 Ga0114129_10331030 3300009147 Bacteria 2022
34 Ga0105237_10005897 3300009545 Bacteria 13731
35 Ga0105238_10480914 3300009551 Bacteria 1241
36 Ga0105239_10104445 3300010375 Bacteria 3137
37 Ga0105239_10897754 3300010375 Bacteria 1017
38 Ga0157379_10005307 3300014968 Bacteria 11071
39 Ga0157376_10484185 3300014969 Bacteria 1213
40 Ga0213874_10021198 3300021377 Bacteria 1789
41 Ga0213876_10003893 3300021384 Bacteria 8436
42 Ga0213876_10017698 3300021384 Bacteria 3760
43 Ga0213876_10033687 3300021384 Bacteria 2700
44 Ga0213876_10035076 3300021384 Bacteria 2646
45 Ga0213876_10044322 3300021384 Bacteria 2351
46 Ga0213875_10057545 3300021388 Bacteria 1821
47 Ga0207707_10048032 3300025912 Bacteria 3718
48 Ga0207671_10004301 3300025914 Bacteria 13687
49 Ga0207693_10000538 3300025915 Bacteria 34292
50 Ga0207693_10000549 3300025915 Bacteria 33996
51 Ga0207663_10002223 3300025916 Bacteria 9292
52 Ga0207660_10357881 3300025917 Bacteria 1171
53 Ga0207646_10203374 3300025922 Bacteria 1789
54 Ga0207687_10016403 3300025927 Bacteria 4865
55 Ga0207687_10035623 3300025927 Bacteria 3386
56 Ga0207664_10075762 3300025929 Bacteria 2721
57 Ga0207664_10251451 3300025929 Bacteria 1543
58 Ga0207664_10345258 3300025929 Bacteria 1317
59 Ga0207664_10575460 3300025929 Bacteria 1011
60 Ga0207664_10707259 3300025929 Bacteria 906
61 Ga0207690_10141649 3300025932 Bacteria 1772
62 Ga0207669_10129866 3300025937 Bacteria 1729
63 Ga0207704_10682774 3300025938 Bacteria 849
64 Ga0207661_10181609 3300025944 Bacteria 1838
65 Ga0207679_10073850 3300025945 Bacteria 2582
66 Ga0207658_10975365 3300025986 Bacteria 773
67 Ga0207677_10017242 3300026023 Bacteria 4299
68 Ga0207703_10069808 3300026035 Bacteria 2899
69 Ga0207648_10086739 3300026089 Bacteria 2731
70 Ga0207683_10020175 3300026121 Bacteria 5697
71 Ga0207683_10164497 3300026121 Bacteria 2007
72 Ga0207683_10329804 3300026121 Bacteria 1399
73 Ga0268265_10543589 3300028380 Bacteria 1102
74 Ga0265319_1006567 3300028563 Bacteria 5372
75 Ga0265319_1063579 3300028563 Bacteria 1193
76 Ga0265334_10077836 3300028573 Bacteria 1226
77 Ga0265318_10027848 3300028577 Bacteria 2216
78 Ga0265336_10041217 3300028666 Bacteria 1412
79 Ga0265325_10039530 3300031241 Bacteria 2484
80 Ga0265325_10056481 3300031241 Bacteria 2005
81 Ga0265329_10003806 3300031242 Bacteria 6482
82 Ga0265339_10049533 3300031249 Bacteria 2300
83 Ga0265339_10233009 3300031249 Bacteria 897
84 Ga0265327_10010308 3300031251 Bacteria 6590
85 Ga0316575_10020266 3300031665 Bacteria 2551
86 Ga0316579_10027820 3300031691 Bacteria 2570
87 Ga0265314_10169387 3300031711 Bacteria 1320
88 Ga0316576_10142664 3300031727 Bacteria 1804
89 Ga0316576_10193787 3300031727 Bacteria 1532
90 Ga0316578_10000785 3300031728 Bacteria 11729
91 Ga0307409_100367119 3300031995 Bacteria 1364
92 Ga0316580_10001392 3300032139 Bacteria 6309
93 Ga0316574_0009298 3300035398 Bacteria 5499
94 Ga0316574_0059961 3300035398 Bacteria 2387
95 Ga0316574_0091205 3300035398 Bacteria 1943
96 Ga0316574_0557465 3300035398 Bacteria 711
97 Ga0373935_0002718 3300035692 Bacteria 10181
98 Ga0373947_0015484 3300035725 Bacteria 4379
99 Ga0316584_0254835 3300036712 Bacteria 1281
100 Ga0316584_0342917 3300036712 Bacteria 1074
101 Ga0373925_0024009 3300037068 Bacteria 4449
102 Ga0395899_0084055 3300037312 Unclassified 2314
103 Ga0395900_0008872 3300037418 Bacteria 10324
104 Ga0395898_0012390 3300037466 Bacteria 8815
105 Ga0395905_0008228 3300037471 Bacteria 10296
106 Ga0436364_0411045 3300037853 Bacteria 5819
107 Ga0436364_0633450 3300037853 Bacteria 21039
108 Ga0436364_1029334 3300037853 Bacteria 4520
109 Ga0436364_1442261 3300037853 Bacteria 7995
110 Ga0395901_0004014 3300038443 Bacteria 14822
111 Ga0436365_0021531 3300039437 Bacteria 858
112 Ga0436365_0037463 3300039437 Bacteria 4416
113 Ga0436365_0078158 3300039437 Bacteria 1940
114 Ga0436365_0280871 3300039437 Bacteria 4260
115 Ga0436365_0381607 3300039437 Bacteria 3575
116 Ga0436365_0502448 3300039437 Bacteria 4991
117 Ga0436365_0509145 3300039437 Bacteria 1102
118 Ga0436365_0518964 3300039437 Bacteria 1164
119 Ga0436365_0677305 3300039437 Bacteria 15827
120 Ga0436365_0709306 3300039437 Bacteria 3722
121 Ga0436365_1885545 3300039437 Bacteria 8460
122 Ga0436363_0249468 3300039450 Bacteria 1848
123 Ga0436363_0766546 3300039450 Bacteria 1323
124 Ga0436363_1360083 3300039450 Bacteria 2075
125 Ga0436363_1515083 3300039450 Bacteria 1682
126 Ga0436362_1155963 3300039453 Bacteria 2252
127 Ga0451843_0787658 3300041509 Bacteria 1976
128 Ga0466969_0027312 3300044656 Bacteria 2923
129 Ga0453683_0120021 3300044673 Bacteria 1655
130 Ga0466965_0079186 3300044683 Bacteria 1660
131 Ga0466966_0218153 3300044684 Bacteria 1152
132 Ga0466966_0265530 3300044684 Bacteria 1033
133 Ga0466966_0366305 3300044684 Bacteria 866
134 Ga0466961_0107034 3300044693 Bacteria 1760
135 Ga0466963_0000861 3300044694 Bacteria 15334
136 Ga0466963_0056389 3300044694 Bacteria 2614
137 Ga0466963_0087917 3300044694 Bacteria 2113
138 Ga0466963_0103240 3300044694 Bacteria 1953
139 Ga0466963_0158276 3300044694 Bacteria 1576
140 Ga0466963_0213316 3300044694 Bacteria 1351
141 Ga0466963_0291107 3300044694 Bacteria 1148
142 Ga0466971_0022542 3300044719 Bacteria 2806
143 Ga0466968_0007382 3300044735 Bacteria 4178
144 Ga0466968_0015538 3300044735 Bacteria 3019
145 Ga0466968_0028178 3300044735 Bacteria 2315
146 Ga0466968_0053931 3300044735 Bacteria 1723
147 Ga0466968_0141506 3300044735 Bacteria 1101
148 Ga0466970_0013688 3300044765 Bacteria 4162
149 Ga0466970_0083909 3300044765 Bacteria 1724
150 Ga0466970_0376050 3300044765 Bacteria 808
151 Ga0466957_0012090 3300044842 Bacteria 4992
152 Ga0466957_0026402 3300044842 Bacteria 3445
153 Ga0466957_0086590 3300044842 Bacteria 1958
154 Ga0466957_0091995 3300044842 Bacteria 1902
155 Ga0466957_0325292 3300044842 Bacteria 1038
156 Ga0466959_0001214 3300045049 Bacteria 15552
157 Ga0466959_0048340 3300045049 Bacteria 3126
158 Ga0466959_0115088 3300045049 Bacteria 1916
159 Ga0451576_0217840 3300045051 Bacteria 1993
160 Ga0466958_0000564 3300045836 Bacteria 15787
161 Ga0466958_0005860 3300045836 Bacteria 6651
162 Ga0466958_0015387 3300045836 Bacteria 4384
163 Ga0466958_0113187 3300045836 Bacteria 1695
164 Ga0466958_0553325 3300045836 Bacteria 748
165 Ga0466967_0005298 3300045976 Bacteria 8903
166 Ga0466967_0027249 3300045976 Bacteria 4751
167 Ga0466967_0052626 3300045976 Bacteria 3575
168 Ga0466967_0103817 3300045976 Bacteria 2601
169 Ga0466967_0118968 3300045976 Bacteria 2437
170 Ga0466967_0268477 3300045976 Bacteria 1634
171 Ga0466967_0276908 3300045976 Bacteria 1609
172 Ga0466967_0287687 3300045976 Bacteria 1578
173 Ga0466967_0292101 3300045976 Bacteria 1566
174 Ga0466967_0362313 3300045976 Bacteria 1405
175 Ga0495629_0449938 3300046459 Bacteria 872
176 Ga0495641_0017980 3300046461 Bacteria 3662
177 Ga0495641_0144496 3300046461 Bacteria 1063
178 Ga0495580_0001914 3300046472 Bacteria 18300
179 Ga0495582_0038342 3300046473 Bacteria 2637
180 Ga0495628_0059728 3300046516 Bacteria 2993
181 Ga0495630_0118744 3300046517 Bacteria 2006
182 Ga0495635_0172004 3300046663 Bacteria 1473
183 Ga0495674_0251586 3300047319 Bacteria 1454
184 Ga0495676_0576588 3300047321 Bacteria 734
185 Ga0496100_0031056 3300048903 Bacteria 3317
186 Ga0496101_0008565 3300048904 Bacteria 6687
187 Ga0496102_0031549 3300048905 Bacteria 4754
188 Ga0496102_0391873 3300048905 Bacteria 1307
189 Ga0496103_0004692 3300048906 Bacteria 8272
190 Ga0496104_0013031 3300048907 Bacteria 7487
191 Ga0496107_0003181 3300048910 Bacteria 10918
192 Ga0496109_0010058 3300048912 Bacteria 8071
193 Ga0496110_0020890 3300048913 Bacteria 5531
194 Ga0496110_0266708 3300048913 Bacteria 1559
195 Ga0496111_0077181 3300048914 Bacteria 2428
196 Ga0496112_0497913 3300048915 Bacteria 1154
197 Ga0496113_0018260 3300048916 Bacteria 4882
198 Ga0496114_0001205 3300048917 Bacteria 19559
199 Ga0496115_0001593 3300048918 Bacteria 16290
200 Ga0501036_0412286 3300049572 Bacteria 1127
201 Ga0501039_0121578 3300049575 Bacteria 2046
202 Ga0501070_0679882 3300049586 Bacteria 815
203 Ga0501075_0092534 3300049591 Bacteria 2295
204 Ga0501076_0201312 3300049592 Bacteria 1626
205 Ga0501045_0109565 3300049824 Bacteria 2047
206 nmdc:mga00v17_462893_c1 3300050491 Bacteria 823
207 nmdc:mga08y16_31986_c1 3300050511 Bacteria 5532
208 nmdc:mga0rr50_139452_c1 3300050513 Bacteria 1949
209 Ga0500616_0001727 3300053153 Bacteria 20041
210 Ga0466962_0005367 3300061719 Bacteria 6167
211 Ga0466962_0060552 3300061719 Bacteria 1807
212 Ga0466962_0197146 3300061719 Bacteria 983
213 Ga0466961_0325707
214 Ga0070683_100157591
215 Ga0070690_100190264
216 Ga0070680_100456344
217 Ga0068868_100016646
218 Ga0070674_100046096
219 Ga0070714_100088802
220 Ga0070714_100437415
221 Ga0070714_100841394
222 Ga0070711_100003039
223 Ga0070708_100380396
224 Ga0070678_100013085
225 Ga0070678_100081409
226 Ga0070681_10005117
227 Ga0070681_10503816
228 Ga0070706_100217351
229 Ga0070707_100019595
230 Ga0070707_100743275
231 Ga0070684_100405320
232 Ga0068853_100769332
233 Ga0070672_100524997
234 Ga0070686_100067926
235 Ga0070665_100168349
236 Ga0068854_100042833
237 Ga0070712_100000243
238 Ga0070712_100294216
239 Ga0070712_100394312
240 Ga0075428_100006246
241 Ga0075428_101117131
242 Ga0111539_10031850
243 Ga0105245_10005047
244 Ga0105245_10029400
245 Ga0114129_10331030
246 Ga0105237_10005897
247 Ga0105238_10480914
248 Ga0105239_10104445
249 Ga0105239_10897754
250 Ga0157379_10005307
251 Ga0157376_10484185
252 Ga0213874_10021198
253 Ga0213876_10003893
254 Ga0213876_10017698
255 Ga0213876_10033687
256 Ga0213876_10035076
257 Ga0213876_10044322
258 Ga0213875_10057545
259 Ga0207707_10048032
260 Ga0207671_10004301
261 Ga0207693_10000538
262 Ga0207693_10000549
263 Ga0207663_10002223
264 Ga0207660_10357881
265 Ga0207646_10203374
266 Ga0207687_10016403
267 Ga0207687_10035623
268 Ga0207664_10075762
269 Ga0207664_10251451
270 Ga0207664_10345258
271 Ga0207664_10575460
272 Ga0207664_10707259
273 Ga0207690_10141649
274 Ga0207669_10129866
275 Ga0207704_10682774
276 Ga0207661_10181609
277 Ga0207679_10073850
278 Ga0207658_10975365
279 Ga0207677_10017242
280 Ga0207703_10069808
281 Ga0207648_10086739
282 Ga0207683_10020175
283 Ga0207683_10164497
284 Ga0207683_10329804
285 Ga0268265_10543589
286 Ga0265319_1006567
287 Ga0265319_1063579
288 Ga0265334_10077836
289 Ga0265318_10027848
290 Ga0265336_10041217
291 Ga0265325_10039530
292 Ga0265325_10056481
293 Ga0265329_10003806
294 Ga0265339_10049533
295 Ga0265339_10233009
296 Ga0265327_10010308
297 Ga0316575_10020266
298 Ga0316579_10027820
299 Ga0265314_10169387
300 Ga0316576_10142664
301 Ga0316576_10193787
302 Ga0316578_10000785
303 Ga0307409_100367119
304 Ga0316580_10001392
305 Ga0316574_0009298
306 Ga0316574_0059961
307 Ga0316574_0091205
308 Ga0316574_0557465
309 Ga0373935_0002718
310 Ga0373947_0015484
311 Ga0316584_0254835
312 Ga0316584_0342917
313 Ga0373925_0024009
314 Ga0395899_0084055
315 Ga0395900_0008872
316 Ga0395898_0012390
317 Ga0395905_0008228
318 Ga0436364_0411045
319 Ga0436364_0633450
320 Ga0436364_1029334
321 Ga0436364_1442261
322 Ga0395901_0004014
323 Ga0436365_0021531
324 Ga0436365_0037463
325 Ga0436365_0078158
326 Ga0436365_0280871
327 Ga0436365_0381607
328 Ga0436365_0502448
329 Ga0436365_0509145
330 Ga0436365_0518964
331 Ga0436365_0677305
332 Ga0436365_0709306
333 Ga0436365_1885545
334 Ga0436363_0249468
335 Ga0436363_0766546
336 Ga0436363_1360083
337 Ga0436363_1515083
338 Ga0436362_1155963
339 Ga0451843_0787658
340 Ga0466969_0027312
341 Ga0453683_0120021
342 Ga0466965_0079186
343 Ga0466966_0218153
344 Ga0466966_0265530
345 Ga0466966_0366305
346 Ga0466961_0107034
347 Ga0466963_0000861
348 Ga0466963_0056389
349 Ga0466963_0087917
350 Ga0466963_0103240
351 Ga0466963_0158276
352 Ga0466963_0213316
353 Ga0466963_0291107
354 Ga0466971_0022542
355 Ga0466968_0007382
356 Ga0466968_0015538
357 Ga0466968_0028178
358 Ga0466968_0053931
359 Ga0466968_0141506
360 Ga0466970_0013688
361 Ga0466970_0083909
362 Ga0466970_0376050
363 Ga0466957_0012090
364 Ga0466957_0026402
365 Ga0466957_0086590
366 Ga0466957_0091995
367 Ga0466957_0325292
368 Ga0466959_0001214
369 Ga0466959_0048340
370 Ga0466959_0115088
371 Ga0451576_0217840
372 Ga0466958_0000564
373 Ga0466958_0005860
374 Ga0466958_0015387
375 Ga0466958_0113187
376 Ga0466958_0553325
377 Ga0466967_0005298
378 Ga0466967_0027249
379 Ga0466967_0052626
380 Ga0466967_0103817
381 Ga0466967_0118968
382 Ga0466967_0268477
383 Ga0466967_0276908
384 Ga0466967_0287687
385 Ga0466967_0292101
386 Ga0466967_0362313
387 Ga0495629_0449938
388 Ga0495641_0017980
389 Ga0495641_0144496
390 Ga0495580_0001914
391 Ga0495582_0038342
392 Ga0495628_0059728
393 Ga0495630_0118744
394 Ga0495635_0172004
395 Ga0495674_0251586
396 Ga0495676_0576588
397 Ga0496100_0031056
398 Ga0496101_0008565
399 Ga0496102_0031549
400 Ga0496102_0391873
401 Ga0496103_0004692
402 Ga0496104_0013031
403 Ga0496107_0003181
404 Ga0496109_0010058
405 Ga0496110_0020890
406 Ga0496110_0266708
407 Ga0496111_0077181
408 Ga0496112_0497913
409 Ga0496113_0018260
410 Ga0496114_0001205
411 Ga0496115_0001593
412 Ga0501036_0412286
413 Ga0501039_0121578
414 Ga0501070_0679882
415 Ga0501075_0092534
416 Ga0501076_0201312
417 Ga0501045_0109565
418 nmdc:mga00v17_462893_c1
419 nmdc:mga08y16_31986_c1
420 nmdc:mga0rr50_139452_c1
421 Ga0500616_0001727
422 Ga0466962_0005367
423 Ga0466962_0060552
424 Ga0466962_0197146

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

94

269

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.9094 5 218
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.87 5 218
1ui1-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase from thermus thermophilus hb8 0.7672 4 212
4zbz-assembly1.cif.gz_A family 4 uracil-dna glycosylase from sulfolobus tokodaii (free form, x-ray wavelength=1.5418) 0.7671 1 219
4zbz-assembly1.cif.gz_A family 4 uracil-dna glycosylase from sulfolobus tokodaii (free form, x-ray wavelength=1.5418) 0.7562 1 219
ID Description Score Start End Superfamily
af_P9WM53_47_267_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9385 5 220 3.40.470.10
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9113 5 218 3.40.470.10
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8718 5 218 3.40.470.10
4zbzA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.767 1 219 3.40.470.10
4zbzA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7561 1 219 3.40.470.10
ID Description Score Start End GO Terms
AF-A0A257T9Q7-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9716 2 163 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539
AF-Q2JQT3-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9713 3 154 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539
AF-A0A350UJL0-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9691 7 154 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539
AF-A0A7V8ZEW5-F1-model_v4 Uracil-DNA glycosylase 0.9675 2 152 GO:0006281
GO:0046872
GO:0051539
GO:0097506
AF-A0A7X3ZU71-F1-model_v4 deleted 0.9659 1 164

Map