F322737

General Info

Members Datasets Scaffolds Average Seq Length
212 146 212 402

Family's Representative Sequence

Representative Sequence 3300007265|Ga0099794_10005650|Ga0099794_100056502
Length 462
Sequence MLISYLSHSRFLPSDLRERASFGFQSTAILTKRLNAGAATISIAAFFDASRLSRQIAMRHSQEQSEGHRAALVAGFLGWAFVAFDFFLVVVTLTAIAKEFHRPDKAVALSIALTLGFRPVGALIFGLIADRYGRRPPLMFVLVFYSVIEVLSGLAPNYATFLMLRSLFGIGMGAQWGVGASLAMEKVPPRSRGVLSGLLQEGYAVGYLLAAVCSLIVLPRWGWRPLFFIGGLPSLLALFVRFRVKESEVWKSTRHESWGQLGRAIASHWRLFVFLLIMLTMMNFVSHGTQDMYPTFLERYWGFGPTQRLTVTAISMIGAITGGILFGLLSDRIGRRRSMIIALGCAIVVVPLWAFAPSLTLLIVGAFLMQFMVQGAWGIIPAHLSELSPDSVRGFLPGFAYQCGVLVAGSVAYIEALFAERMSYATAMSLTAVTVFAGAALVIALGREKPGIHFGGEMIINE

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
64 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
124 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
127 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
132 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
133 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
134 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
135 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.42
Rhizosphere 93.87
Stem 0
Stem Tuber 0
Unclassified 4.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000018 3300002074 Bacteria 129847
2 JGI24034J26672_10000001 3300002239 Bacteria 1118280
3 Ga0070676_10145746 3300005328 Bacteria 1511
4 Ga0070690_100074426 3300005330 Unclassified 2212
5 Ga0070680_100009861 3300005336 Bacteria 7350
6 Ga0068868_100002695 3300005338 Bacteria 12327
7 Ga0070689_100204039 3300005340 Unclassified 1615
8 Ga0070687_100105053 3300005343 Unclassified 1589
9 Ga0070671_100030203 3300005355 Bacteria 4472
10 Ga0070673_100002995 3300005364 Bacteria 10423
11 Ga0070673_100011074 3300005364 Bacteria 6146
12 Ga0070703_10000180 3300005406 Bacteria 30778
13 Ga0070709_10021922 3300005434 Bacteria 3729
14 Ga0070714_100021551 3300005435 Bacteria 5273
15 Ga0070714_100196552 3300005435 Bacteria 1843
16 Ga0070714_100287057 3300005435 Bacteria 1530
17 Ga0070713_100014940 3300005436 Bacteria 5781
18 Ga0070710_10032391 3300005437 Bacteria 2831
19 Ga0070711_100000030 3300005439 Bacteria 100932
20 Ga0070711_100013664 3300005439 Bacteria 5101
21 Ga0070700_100069415 3300005441 Unclassified 2244
22 Ga0070694_100008011 3300005444 Bacteria 6456
23 Ga0070708_100000042 3300005445 Bacteria 83511
24 Ga0070708_100186469 3300005445 Unclassified 1940
25 Ga0070708_100194111 3300005445 Bacteria 1899
26 Ga0070706_100007447 3300005467 Bacteria 10263
27 Ga0070706_100094843 3300005467 Bacteria 2769
28 Ga0070706_100413670 3300005467 Bacteria 1255
29 Ga0070707_100004457 3300005468 Bacteria 13110
30 Ga0070707_100041571 3300005468 Bacteria 4400
31 Ga0070707_100049627 3300005468 Bacteria 4023
32 Ga0070707_100077168 3300005468 Bacteria 3214
33 Ga0070698_100000127 3300005471 Bacteria 66092
34 Ga0070698_100013777 3300005471 Bacteria 8557
35 Ga0070698_100093852 3300005471 Bacteria 2980
36 Ga0070699_100002993 3300005518 Bacteria 15009
37 Ga0070679_100132149 3300005530 Bacteria 2477
38 Ga0070684_100161741 3300005535 Bacteria 2031
39 Ga0070697_100003479 3300005536 Bacteria 12102
40 Ga0070697_100024600 3300005536 Bacteria 4796
41 Ga0070697_100037424 3300005536 Bacteria 3920
42 Ga0070697_100042498 3300005536 Bacteria 3679
43 Ga0070697_100131228 3300005536 Bacteria 2101
44 Ga0070695_100011590 3300005545 Bacteria 5277
45 Ga0070695_100120776 3300005545 Bacteria 1792
46 Ga0070665_100002876 3300005548 Bacteria 18604
47 Ga0070704_100031022 3300005549 Bacteria 3589
48 Ga0068855_100126717 3300005563 Bacteria 2919
49 Ga0068854_100201980 3300005578 Bacteria 1563
50 Ga0068856_100007181 3300005614 Bacteria 10863
51 Ga0070702_100101428 3300005615 Bacteria 1766
52 Ga0068852_100056376 3300005616 Bacteria 3396
53 Ga0068859_100039246 3300005617 Bacteria 4750
54 Ga0068858_100000005 3300005842 Bacteria 305830
55 Ga0081455_10006386 3300005937 Bacteria 12655
56 Ga0070717_10005593 3300006028 Bacteria 9175
57 Ga0070717_10041366 3300006028 Bacteria 3757
58 Ga0070717_10077240 3300006028 Bacteria 2788
59 Ga0070715_10000034 3300006163 Bacteria 80012
60 Ga0070716_100000003 3300006173 Bacteria 312721
61 Ga0070716_100060103 3300006173 Bacteria 2194
62 Ga0075433_10066819 3300006852 Unclassified 3155
63 Ga0075433_10110461 3300006852 Bacteria 2439
64 Ga0075434_100006736 3300006871 Bacteria 10556
65 Ga0075434_100122436 3300006871 Bacteria 2617
66 Ga0075436_100000002 3300006914 Bacteria 475522
67 Ga0075436_100001165 3300006914 Bacteria 17802
68 Ga0075436_100089063 3300006914 Bacteria 2144
69 Ga0075436_100092362 3300006914 Bacteria 2104
70 Ga0097620_100039246 3300006931 Bacteria 4750
71 Ga0075435_100174663 3300007076 Bacteria 1814
72 Ga0099794_10005650 3300007265 Bacteria 5035
73 Ga0105240_10074000 3300009093 Bacteria 4206
74 Ga0105247_10000002 3300009101 Bacteria 724587
75 Ga0114129_10400888 3300009147 Bacteria 1808
76 Ga0105243_10000493 3300009148 Bacteria 40228
77 Ga0105243_10000558 3300009148 Bacteria 37622
78 Ga0105242_10000817 3300009176 Bacteria 24173
79 Ga0105242_10001631 3300009176 Bacteria 17700
80 Ga0105239_10003629 3300010375 Bacteria 18866
81 Ga0105239_10028129 3300010375 Bacteria 6186
82 Ga0157371_10021394 3300013102 Bacteria 4749
83 Ga0157370_10003949 3300013104 Bacteria 17262
84 Ga0157370_10223329 3300013104 Bacteria 1744
85 Ga0157369_10031366 3300013105 Bacteria 5852
86 Ga0157369_10038379 3300013105 Bacteria 5237
87 Ga0157374_10016507 3300013296 Bacteria 6493
88 Ga0157374_10113516 3300013296 Bacteria 2608
89 Ga0157378_10000077 3300013297 Bacteria 89664
90 Ga0157378_10004689 3300013297 Bacteria 11992
91 Ga0157378_10072597 3300013297 Unclassified 3092
92 Ga0163162_10003297 3300013306 Bacteria 15445
93 Ga0157372_10104791 3300013307 Bacteria 3234
94 Ga0157372_10201354 3300013307 Bacteria 2306
95 Ga0157375_10004099 3300013308 Bacteria 12637
96 Ga0163163_10077531 3300014325 Bacteria 3318
97 Ga0213875_10000006 3300021388 Bacteria 579005
98 Ga0213875_10011815 3300021388 Bacteria 4332
99 Ga0213875_10029252 3300021388 Bacteria 2613
100 Ga0228598_1002535 3300024227 Bacteria 3976
101 Ga0207672_1000032 3300025223 Bacteria 18064
102 Ga0207653_10000154 3300025885 Bacteria 48375
103 Ga0207710_10000002 3300025900 Bacteria 1251998
104 Ga0207685_10000006 3300025905 Bacteria 284255
105 Ga0207699_10060425 3300025906 Bacteria 2276
106 Ga0207645_10050182 3300025907 Bacteria 2664
107 Ga0207684_10004349 3300025910 Bacteria 13378
108 Ga0207707_10203425 3300025912 Bacteria 1726
109 Ga0207695_10243864 3300025913 Unclassified 1697
110 Ga0207671_10049090 3300025914 Unclassified 3124
111 Ga0207693_10025679 3300025915 Bacteria 4668
112 Ga0207663_10000008 3300025916 Bacteria 205803
113 Ga0207660_10022432 3300025917 Bacteria 4253
114 Ga0207662_10008830 3300025918 Bacteria 5528
115 Ga0207657_10087533 3300025919 Bacteria 2606
116 Ga0207646_10001854 3300025922 Bacteria 25492
117 Ga0207646_10034122 3300025922 Bacteria 4598
118 Ga0207646_10036432 3300025922 Bacteria 4441
119 Ga0207664_10081848 3300025929 Bacteria 2628
120 Ga0207644_10000361 3300025931 Bacteria 29606
121 Ga0207686_10000257 3300025934 Bacteria 40231
122 Ga0207686_10001110 3300025934 Bacteria 15670
123 Ga0207686_10002748 3300025934 Bacteria 9540
124 Ga0207709_10000325 3300025935 Bacteria 51529
125 Ga0207709_10000427 3300025935 Bacteria 40208
126 Ga0207665_10000009 3300025939 Bacteria 162252
127 Ga0207665_10060250 3300025939 Bacteria 2570
128 Ga0207711_10232398 3300025941 Bacteria 1689
129 Ga0207651_10102014 3300025960 Unclassified 2131
130 Ga0207651_10174237 3300025960 Bacteria 1700
131 Ga0207712_10065471 3300025961 Bacteria 2594
132 Ga0207703_10000984 3300026035 Bacteria 27426
133 Ga0207708_10020244 3300026075 Bacteria 5017
134 Ga0207702_10002817 3300026078 Bacteria 16263
135 Ga0207675_100000853 3300026118 Bacteria 30381
136 Ga0207683_10164404 3300026121 Bacteria 2008
137 Ga0209588_1050921 3300027671 Unclassified 1339
138 Ga0268266_10000765 3300028379 Bacteria 42983
139 Ga0265325_10063478 3300031241 Bacteria 1868
140 Ga0265316_10006670 3300031344 Bacteria 10995
141 Ga0265316_10043412 3300031344 Bacteria 3583
142 Ga0265313_10021175 3300031595 Bacteria 3562
143 Ga0373959_0000357 3300034820 Bacteria 9168
144 Ga0373954_0014102 3300035118 Bacteria 3562
145 Ga0373954_0036832 3300035118 Bacteria 2272
146 Ga0373935_0045735 3300035692 Bacteria 2763
147 Ga0373935_0068468 3300035692 Bacteria 2284
148 Ga0373927_0001052 3300035695 Bacteria 21044
149 Ga0373927_0205437 3300035695 Bacteria 1293
150 Ga0373933_0052709 3300035724 Bacteria 2435
151 Ga0373947_0113146 3300035725 Bacteria 1717
152 Ga0373937_0066356 3300036401 Bacteria 3323
153 Ga0395900_0026872 3300037418 Bacteria 5890
154 Ga0436364_0401764 3300037853 Bacteria 4075
155 Ga0436364_0478514 3300037853 Bacteria 578677
156 Ga0436364_1082305 3300037853 Bacteria 4109
157 Ga0436364_1362380 3300037853 Bacteria 5859
158 Ga0436364_1407186 3300037853 Bacteria 5623
159 Ga0436364_1481694 3300037853 Bacteria 3491
160 Ga0395901_0094319 3300038443 Unclassified 3135
161 Ga0242420_005980 3300038996 Bacteria 1909
162 Ga0453683_0043256 3300044673 Bacteria 2826
163 Ga0466966_0026322 3300044684 Bacteria 3798
164 Ga0453684_0151115 3300044712 Unclassified 2760
165 Ga0466959_0059810 3300045049 Bacteria 2773
166 Ga0451576_0087839 3300045051 Bacteria 3234
167 Ga0451576_0269646 3300045051 Bacteria 1779
168 Ga0495592_0075499 3300046454 Bacteria 2447
169 Ga0495651_0038524 3300046462 Bacteria 3722
170 Ga0495650_0003301 3300046471 Bacteria 11914
171 Ga0495580_0012881 3300046472 Bacteria 6408
172 Ga0495662_0018388 3300046476 Bacteria 3382
173 Ga0495664_0088072 3300046477 Bacteria 1866
174 Ga0495585_0003839 3300046492 Bacteria 9998
175 Ga0495628_0032512 3300046516 Bacteria 4211
176 Ga0495630_0083174 3300046517 Bacteria 2416
177 Ga0495644_0000116 3300046523 Bacteria 37815
178 Ga0495642_0008747 3300046528 Bacteria 3868
179 Ga0495640_0017804 3300046533 Bacteria 5286
180 Ga0495598_0016899 3300046537 Bacteria 1871
181 Ga0495609_0017708 3300046538 Bacteria 3306
182 Ga0495645_0016792 3300046543 Bacteria 5238
183 Ga0495611_0043338 3300046648 Bacteria 2012
184 Ga0495635_0035313 3300046663 Bacteria 3466
185 Ga0495599_0004697 3300046678 Bacteria 8105
186 Ga0495623_0012853 3300046679 Bacteria 5423
187 Ga0495669_0000974 3300046684 Bacteria 11960
188 Ga0495613_0000600 3300046689 Bacteria 29024
189 Ga0495613_0099880 3300046689 Bacteria 2096
190 Ga0495600_0149532 3300046809 Bacteria 1513
191 Ga0495674_0014022 3300047319 Bacteria 7513
192 Ga0495674_0057303 3300047319 Bacteria 3410
193 Ga0495674_0208367 3300047319 Bacteria 1620
194 Ga0495680_0014816 3300047322 Bacteria 6741
195 Ga0495680_0030573 3300047322 Bacteria 4396
196 Ga0495673_0041405 3300047469 Unclassified 2074
197 Ga0495684_0104148 3300047471 Bacteria 2144
198 Ga0496106_0000981 3300048909 Bacteria 20812
199 Ga0496112_0008323 3300048915 Bacteria 9282
200 Ga0496112_0008851 3300048915 Bacteria 9032
201 Ga0496126_0000068 3300048929 Bacteria 248663
202 nmdc:mga0n895_120785_c1 3300050512 Bacteria 2641
203 nmdc:mga0n895_181241_c1 3300050512 Bacteria 2138
204 nmdc:mga0n895_287987_c1 3300050512 Unclassified 1665
205 nmdc:mga0n895_331992_c1 3300050512 Unclassified 1540
206 nmdc:mga0n895_9938_c1 3300050512 Bacteria 8370
207 nmdc:mga0rr50_111049_c1 3300050513 Bacteria 2169
208 nmdc:mga0rr50_250806_c1 3300050513 Bacteria 1470
209 nmdc:mga08x19_112654_c1 3300050514 Bacteria 1816
210 nmdc:mga08x19_11_c1 3300050514 Bacteria 403007
211 nmdc:mga08x19_9_c1 3300050514 Bacteria 418852
212 nmdc:mga0a205_165367_c1 3300050515 Unclassified 2108

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0026872 Ga0395900_0026872_4877_5857 309
2 3300046809 Ga0495600_0149532 Ga0495600_0149532_127_1161 325
3 3300046663 Ga0495635_0035313 Ga0495635_0035313_1443_2579 337
4 3300047322 Ga0495680_0014816 Ga0495680_0014816_1625_2767 337
5 3300006173 Ga0070716_100000003 Ga0070716_100000003121 365
6 3300025939 Ga0207665_10000009 Ga0207665_100000093 365
7 3300005435 Ga0070714_100287057 Ga0070714_1002870571 370
8 3300038443 Ga0395901_0094319 Ga0395901_0094319_1462_2694 370
9 3300005328 Ga0070676_10145746 Ga0070676_101457461 371
10 3300005336 Ga0070680_100009861 Ga0070680_1000098615 371
11 3300005435 Ga0070714_100196552 Ga0070714_1001965521 371
12 3300005616 Ga0068852_100056376 Ga0068852_1000563762 371
13 3300013104 Ga0157370_10003949 Ga0157370_1000394910 371
14 3300013105 Ga0157369_10031366 Ga0157369_100313663 371
15 3300013296 Ga0157374_10016507 Ga0157374_100165075 371
16 3300025907 Ga0207645_10050182 Ga0207645_100501821 371
17 3300025915 Ga0207693_10025679 Ga0207693_100256794 371
18 3300025917 Ga0207660_10022432 Ga0207660_100224324 371
19 3300025919 Ga0207657_10087533 Ga0207657_100875332 371
20 3300025929 Ga0207664_10081848 Ga0207664_100818482 371
21 3300025960 Ga0207651_10174237 Ga0207651_101742373 371
22 3300026121 Ga0207683_10164404 Ga0207683_101644042 371
23 3300048915 Ga0496112_0008323 Ga0496112_0008323_5041_6273 371
24 3300037853 Ga0436364_1362380 Ga0436364_1362380_1079_2314 372
25 3300046471 Ga0495650_0003301 Ga0495650_0003301_7370_8614 372
26 3300005343 Ga0070687_100105053 Ga0070687_1001050532 373
27 3300025885 Ga0207653_10000154 Ga0207653_1000015442 373
28 3300005338 Ga0068868_100002695 Ga0068868_1000026959 374
29 3300005536 Ga0070697_100131228 Ga0070697_1001312282 374
30 3300006852 Ga0075433_10110461 Ga0075433_101104613 374
31 3300006871 Ga0075434_100006736 Ga0075434_1000067362 374
32 3300010375 Ga0105239_10003629 Ga0105239_1000362914 374
33 3300025961 Ga0207712_10065471 Ga0207712_100654712 374
34 3300026118 Ga0207675_100000853 Ga0207675_1000008536 374
35 3300038996 Ga0242420_005980 Ga0242420_005980_376_1614 374
36 3300044673 Ga0453683_0043256 Ga0453683_0043256_1066_2304 374
37 3300044712 Ga0453684_0151115 Ga0453684_0151115_1249_2487 374
38 3300050515 nmdc:mga0a205_165367_c1 nmdc:mga0a205_165367_c1_843_2081 374
39 3300005468 Ga0070707_100041571 Ga0070707_1000415712 376
40 3300025922 Ga0207646_10034122 Ga0207646_100341222 376
41 3300037853 Ga0436364_1481694 Ga0436364_1481694_2001_3203 376
42 3300006852 Ga0075433_10066819 Ga0075433_100668193 377
43 3300021388 Ga0213875_10011815 Ga0213875_100118155 377
44 3300005364 Ga0070673_100002995 Ga0070673_1000029958 378
45 3300006914 Ga0075436_100001165 Ga0075436_1000011652 380
46 3300045051 Ga0451576_0087839 Ga0451576_0087839_1006_2178 380
47 3300050514 nmdc:mga08x19_11_c1 nmdc:mga08x19_11_c1_343919_345145 380
48 3300013104 Ga0157370_10223329 Ga0157370_102233292 382
49 3300035118 Ga0373954_0036832 Ga0373954_0036832_834_2021 382
50 3300035695 Ga0373927_0205437 Ga0373927_0205437_53_1273 382
51 3300046516 Ga0495628_0032512 Ga0495628_0032512_2819_4006 382
52 3300046689 Ga0495613_0099880 Ga0495613_0099880_410_1597 382
53 3300044684 Ga0466966_0026322 Ga0466966_0026322_2184_3443 383
54 3300045049 Ga0466959_0059810 Ga0466959_0059810_626_1885 383
55 3300005545 Ga0070695_100120776 Ga0070695_1001207761 385
56 3300005435 Ga0070714_100021551 Ga0070714_1000215511 386
57 3300005437 Ga0070710_10032391 Ga0070710_100323913 386
58 3300006028 Ga0070717_10077240 Ga0070717_100772402 386
59 3300035692 Ga0373935_0045735 Ga0373935_0045735_784_2061 386
60 3300005434 Ga0070709_10021922 Ga0070709_100219222 387
61 3300005436 Ga0070713_100014940 Ga0070713_1000149403 387
62 3300005536 Ga0070697_100037424 Ga0070697_1000374242 387
63 3300005563 Ga0068855_100126717 Ga0068855_1001267172 387
64 3300005937 Ga0081455_10006386 Ga0081455_1000638613 387
65 3300006028 Ga0070717_10005593 Ga0070717_1000559311 387
66 3300006914 Ga0075436_100089063 Ga0075436_1000890632 387
67 3300006914 Ga0075436_100092362 Ga0075436_1000923622 387
68 3300009093 Ga0105240_10074000 Ga0105240_100740003 387
69 3300010375 Ga0105239_10028129 Ga0105239_100281295 387
70 3300013307 Ga0157372_10201354 Ga0157372_102013542 387
71 3300021388 Ga0213875_10000006 Ga0213875_10000006448 387
72 3300025913 Ga0207695_10243864 Ga0207695_102438642 387
73 3300025914 Ga0207671_10049090 Ga0207671_100490904 387
74 3300037853 Ga0436364_0401764 Ga0436364_0401764_2340_3653 387
75 3300037853 Ga0436364_0478514 Ga0436364_0478514_520641_521849 387
76 3300046454 Ga0495592_0075499 Ga0495592_0075499_392_1594 387
77 3300046462 Ga0495651_0038524 Ga0495651_0038524_615_1817 387
78 3300046476 Ga0495662_0018388 Ga0495662_0018388_1783_2985 387
79 3300046477 Ga0495664_0088072 Ga0495664_0088072_639_1841 387
80 3300046517 Ga0495630_0083174 Ga0495630_0083174_886_2112 387
81 3300046533 Ga0495640_0017804 Ga0495640_0017804_189_1391 387
82 3300046543 Ga0495645_0016792 Ga0495645_0016792_368_1570 387
83 3300046678 Ga0495599_0004697 Ga0495599_0004697_3694_4896 387
84 3300046679 Ga0495623_0012853 Ga0495623_0012853_64_1266 387
85 3300047319 Ga0495674_0014022 Ga0495674_0014022_3403_4605 387
86 3300047322 Ga0495680_0030573 Ga0495680_0030573_486_1712 387
87 3300047471 Ga0495684_0104148 Ga0495684_0104148_237_1463 387
88 3300050512 nmdc:mga0n895_181241_c1 nmdc:mga0n895_181241_c1_162_1370 387
89 3300050514 nmdc:mga08x19_112654_c1 nmdc:mga08x19_112654_c1_456_1664 387
90 3300005530 Ga0070679_100132149 Ga0070679_1001321492 388
91 3300005578 Ga0068854_100201980 Ga0068854_1002019801 388
92 3300005614 Ga0068856_100007181 Ga0068856_1000071814 388
93 3300013102 Ga0157371_10021394 Ga0157371_100213944 388
94 3300013296 Ga0157374_10113516 Ga0157374_101135162 388
95 3300013307 Ga0157372_10104791 Ga0157372_101047912 388
96 3300026078 Ga0207702_10002817 Ga0207702_1000281715 388
97 3300031241 Ga0265325_10063478 Ga0265325_100634782 388
98 3300031595 Ga0265313_10021175 Ga0265313_100211753 388
99 3300034820 Ga0373959_0000357 Ga0373959_0000357_3861_5096 388
100 3300048915 Ga0496112_0008851 Ga0496112_0008851_5379_6584 388
101 3300024227 Ga0228598_1002535 Ga0228598_10025355 389
102 3300031344 Ga0265316_10006670 Ga0265316_100066709 389
103 3300045051 Ga0451576_0269646 Ga0451576_0269646_485_1699 389
104 3300047319 Ga0495674_0208367 Ga0495674_0208367_357_1610 389
105 3300005445 Ga0070708_100000042 Ga0070708_10000004215 390
106 3300005467 Ga0070706_100007447 Ga0070706_1000074474 390
107 3300005468 Ga0070707_100077168 Ga0070707_1000771681 390
108 3300005471 Ga0070698_100013777 Ga0070698_1000137777 390
109 3300005518 Ga0070699_100002993 Ga0070699_1000029935 390
110 3300005536 Ga0070697_100042498 Ga0070697_1000424982 390
111 3300006028 Ga0070717_10041366 Ga0070717_100413665 390
112 3300025939 Ga0207665_10060250 Ga0207665_100602502 390
113 3300037853 Ga0436364_1407186 Ga0436364_1407186_729_1952 390
114 3300005439 Ga0070711_100000030 Ga0070711_10000003030 391
115 3300005468 Ga0070707_100049627 Ga0070707_1000496273 391
116 3300025912 Ga0207707_10203425 Ga0207707_102034251 391
117 3300025916 Ga0207663_10000008 Ga0207663_1000000870 391
118 3300025922 Ga0207646_10036432 Ga0207646_100364324 391
119 3300050513 nmdc:mga0rr50_111049_c1 nmdc:mga0rr50_111049_c1_424_1659 391
120 3300005535 Ga0070684_100161741 Ga0070684_1001617411 392
121 3300005548 Ga0070665_100002876 Ga0070665_10000287612 392
122 3300013105 Ga0157369_10038379 Ga0157369_100383792 392
123 3300013297 Ga0157378_10072597 Ga0157378_100725972 392
124 3300013306 Ga0163162_10003297 Ga0163162_1000329712 392
125 3300014325 Ga0163163_10077531 Ga0163163_100775312 392
126 3300021388 Ga0213875_10029252 Ga0213875_100292523 392
127 3300028379 Ga0268266_10000765 Ga0268266_100007653 392
128 3300037853 Ga0436364_1082305 Ga0436364_1082305_803_2029 392
129 3300046492 Ga0495585_0003839 Ga0495585_0003839_7841_9091 392
130 3300046523 Ga0495644_0000116 Ga0495644_0000116_19361_20611 392
131 3300046528 Ga0495642_0008747 Ga0495642_0008747_569_1819 392
132 3300046538 Ga0495609_0017708 Ga0495609_0017708_432_1682 392
133 3300046648 Ga0495611_0043338 Ga0495611_0043338_158_1408 392
134 3300046684 Ga0495669_0000974 Ga0495669_0000974_8812_10062 392
135 3300046689 Ga0495613_0000600 Ga0495613_0000600_27203_28453 392
136 3300047469 Ga0495673_0041405 Ga0495673_0041405_142_1392 392
137 3300031344 Ga0265316_10043412 Ga0265316_100434122 393
138 3300005439 Ga0070711_100013664 Ga0070711_1000136643 394
139 3300007076 Ga0075435_100174663 Ga0075435_1001746632 394
140 3300009148 Ga0105243_10000493 Ga0105243_1000049310 394
141 3300009176 Ga0105242_10000817 Ga0105242_100008176 394
142 3300025934 Ga0207686_10000257 Ga0207686_1000025710 394
143 3300025935 Ga0207709_10000427 Ga0207709_1000042727 394
144 3300048929 Ga0496126_0000068 Ga0496126_0000068_961_2196 394
145 3300050512 nmdc:mga0n895_331992_c1 nmdc:mga0n895_331992_c1_107_1333 394
146 3300050513 nmdc:mga0rr50_250806_c1 nmdc:mga0rr50_250806_c1_88_1350 394
147 3300005340 Ga0070689_100204039 Ga0070689_1002040392 396
148 3300005406 Ga0070703_10000180 Ga0070703_1000018023 396
149 3300005441 Ga0070700_100069415 Ga0070700_1000694151 396
150 3300005445 Ga0070708_100186469 Ga0070708_1001864693 396
151 3300005549 Ga0070704_100031022 Ga0070704_1000310221 396
152 3300005617 Ga0068859_100039246 Ga0068859_1000392464 396
153 3300006931 Ga0097620_100039246 Ga0097620_1000392464 396
154 3300007265 Ga0099794_10005650 Ga0099794_100056502 396
155 3300025941 Ga0207711_10232398 Ga0207711_102323981 396
156 3300026075 Ga0207708_10020244 Ga0207708_100202444 396
157 3300027671 Ga0209588_1050921 Ga0209588_10509211 396
158 3300046537 Ga0495598_0016899 Ga0495598_0016899_143_1357 396
159 3300005445 Ga0070708_100194111 Ga0070708_1001941112 397
160 3300005467 Ga0070706_100413670 Ga0070706_1004136701 397
161 3300005468 Ga0070707_100004457 Ga0070707_1000044578 397
162 3300005471 Ga0070698_100000127 Ga0070698_1000001279 397
163 3300005471 Ga0070698_100093852 Ga0070698_1000938522 397
164 3300005536 Ga0070697_100024600 Ga0070697_1000246003 397
165 3300006163 Ga0070715_10000034 Ga0070715_1000003418 397
166 3300006173 Ga0070716_100060103 Ga0070716_1000601031 397
167 3300006914 Ga0075436_100000002 Ga0075436_100000002106 397
168 3300025905 Ga0207685_10000006 Ga0207685_1000000616 397
169 3300025906 Ga0207699_10060425 Ga0207699_100604252 397
170 3300025910 Ga0207684_10004349 Ga0207684_100043492 397
171 3300025918 Ga0207662_10008830 Ga0207662_100088304 397
172 3300025922 Ga0207646_10001854 Ga0207646_1000185415 397
173 3300025934 Ga0207686_10001110 Ga0207686_1000111013 397
174 3300035695 Ga0373927_0001052 Ga0373927_0001052_6401_7636 397
175 3300046472 Ga0495580_0012881 Ga0495580_0012881_3941_5176 397
176 3300050512 nmdc:mga0n895_287987_c1 nmdc:mga0n895_287987_c1_39_1253 397
177 3300050514 nmdc:mga08x19_9_c1 nmdc:mga08x19_9_c1_295029_296243 397
178 3300005364 Ga0070673_100011074 Ga0070673_1000110746 398
179 3300009147 Ga0114129_10400888 Ga0114129_104008881 398
180 3300009148 Ga0105243_10000558 Ga0105243_100005585 398
181 3300009176 Ga0105242_10001631 Ga0105242_100016317 398
182 3300013297 Ga0157378_10000077 Ga0157378_1000007731 398
183 3300013308 Ga0157375_10004099 Ga0157375_1000409914 398
184 3300025934 Ga0207686_10002748 Ga0207686_100027483 398
185 3300025935 Ga0207709_10000325 Ga0207709_1000032534 398
186 3300025960 Ga0207651_10102014 Ga0207651_101020142 398
187 3300048909 Ga0496106_0000981 Ga0496106_0000981_17732_18949 398
188 3300002074 JGI24748J21848_1000018 JGI24748J21848_100001842 399
189 3300002239 JGI24034J26672_10000001 JGI24034J26672_10000001489 399
190 3300005330 Ga0070690_100074426 Ga0070690_1000744262 399
191 3300005355 Ga0070671_100030203 Ga0070671_1000302034 399
192 3300005444 Ga0070694_100008011 Ga0070694_1000080116 399
193 3300005467 Ga0070706_100094843 Ga0070706_1000948431 399
194 3300005536 Ga0070697_100003479 Ga0070697_1000034791 399
195 3300005545 Ga0070695_100011590 Ga0070695_1000115902 399
196 3300005615 Ga0070702_100101428 Ga0070702_1001014281 399
197 3300005842 Ga0068858_100000005 Ga0068858_100000005253 399
198 3300006871 Ga0075434_100122436 Ga0075434_1001224361 399
199 3300009101 Ga0105247_10000002 Ga0105247_10000002499 399
200 3300013297 Ga0157378_10004689 Ga0157378_100046894 399
201 3300025223 Ga0207672_1000032 Ga0207672_100003213 399
202 3300025900 Ga0207710_10000002 Ga0207710_10000002499 399
203 3300025931 Ga0207644_10000361 Ga0207644_1000036123 399
204 3300026035 Ga0207703_10000984 Ga0207703_100009842 399
205 3300035118 Ga0373954_0014102 Ga0373954_0014102_1742_2986 399
206 3300035692 Ga0373935_0068468 Ga0373935_0068468_537_1781 399
207 3300035724 Ga0373933_0052709 Ga0373933_0052709_898_2142 399
208 3300035725 Ga0373947_0113146 Ga0373947_0113146_36_1280 399
209 3300036401 Ga0373937_0066356 Ga0373937_0066356_1150_2394 399
210 3300047319 Ga0495674_0057303 Ga0495674_0057303_2006_3250 399
211 3300050512 nmdc:mga0n895_120785_c1 nmdc:mga0n895_120785_c1_894_2120 399
212 3300050512 nmdc:mga0n895_9938_c1 nmdc:mga0n895_9938_c1_6654_7886 399

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

281

455

0.89

PF00083

Sugar_tr

Sugar (and other) transporter

38

260

0.85

PF07690

MFS_1

Major Facilitator Superfamily

75

304

0.85

PF00083

Sugar_tr

Sugar (and other) transporter

272

447

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wdo-assembly1.cif.gz_A structure of e. coli yajr transporter 0.8652 10 386
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8379 14 383
3wdo-assembly1.cif.gz_A structure of e. coli yajr transporter 0.8191 10 386
6lz0-assembly1.cif.gz_A cryo-em structure of human mct1 in complex with basigin-2 in the presence of lactate 0.818 15 382
6lyy-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate azd3965 in the outward-open conformation. 0.8139 13 383
ID Description Score Start End Superfamily
af_O07730_11_220_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9669 14 196 1.20.1250.20
af_P41036_15_224_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9573 13 197 1.20.1250.20
af_Q8BG39_106_432_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9422 13 198 1.20.1250.20
af_O07730_221_402_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9378 218 387 1.20.1250.20
af_P39352_7_395_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9363 11 383 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2V8R498-F1-model_v4 MFS transporter 0.9863 9 394 GO:0005886
GO:0046943
AF-A0A2V7LIM4-F1-model_v4 MFS transporter 0.9788 3 395 GO:0005886
GO:0046943
AF-A0A2V8QWS2-F1-model_v4 MFS transporter 0.9708 9 242 GO:0005886
GO:0046943
AF-C2UM82-F1-model_v4 deleted 0.9676 13 197
AF-A0A2V7NWD9-F1-model_v4 MFS transporter 0.9663 1 393 GO:0005886
GO:0046943

Feature Viewer

pLDDT pTM Quality
85.48 0.85 High
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Predicted Structure (AlphaFold2)

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