F322688

General Info

Members Datasets Scaffolds Average Seq Length
212 133 212 486

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_100035260|Ga0097621_1000352604
Length 530
Sequence MLQILQHTIAYLHFVQWSPAPKVALGKGRDMTIALVSPAENLSGWLHAAAQRRPDKIALAVGDDTITYAALDYRSRALACRLLQEGLQPGDRVGVHWANSVECALLLFACFEAGIIALPVNTRFKAAEIAYVMQHSGAVAWFSQPGLAEMAQAAAGELDHPLAIRSHLPEALTTGDLPAPAAESLAVIMYTSGTTARPKGVMHTHASLLAGARAMASFGLDEGQTMLCTMSMMHASGLVCTLLGAIQAGATAVLMPAFDPSGALDLIQKYRCTWLLALPAMMQFILDEQEQRPRNLGSLRVGISGGDSVPLQLQERFLGLFPQAGIRELYGITEIVPVTCGTAQANRPGSVGRPACGIAMRVLDAAGSEAADGETGEFAIHSAGNFSGYWNDEAATKAAVHDGWFLSGDLGYRDRDGFFWFKGRKKEIIIRGGSNIAPQEVEEALYRHPAVHEAGVIGMPHPVYGEEVVACVALRQGQKASEMELCDSARKHLADYKVPTRIVFLDVLPKGITGKIQRRALKDMLSAGTQ

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
109 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
110 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
111 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
115 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
116 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
117 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
118 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
121 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 0
Rhizosphere 98.58
Stem 0
Stem Tuber 0
Unclassified 0.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10062459 3300003323 Bacteria 7277
2 Ga0070658_10000143 3300005327 Bacteria 63183
3 Ga0070658_10033449 3300005327 Bacteria 4136
4 Ga0070658_10054033 3300005327 Bacteria 3261
5 Ga0070658_10143692 3300005327 Archaea 1994
6 Ga0070683_100000886 3300005329 Bacteria 22228
7 Ga0070683_100005864 3300005329 Bacteria 10279
8 Ga0070683_100013213 3300005329 Bacteria 7193
9 Ga0070683_100060770 3300005329 Bacteria 3512
10 Ga0070666_10065086 3300005335 Bacteria 2473
11 Ga0070680_100005238 3300005336 Bacteria 9813
12 Ga0070680_100100908 3300005336 Bacteria 2396
13 Ga0070660_100001899 3300005339 Bacteria 14398
14 Ga0070660_100013989 3300005339 Bacteria 5774
15 Ga0070659_100044944 3300005366 Bacteria 3460
16 Ga0070709_10063790 3300005434 Bacteria 2354
17 Ga0070708_100020867 3300005445 Bacteria 5531
18 Ga0070662_100093390 3300005457 Bacteria 2263
19 Ga0070681_10007647 3300005458 Bacteria 10569
20 Ga0068867_100055522 3300005459 Bacteria 2929
21 Ga0068867_100124999 3300005459 Bacteria 1992
22 Ga0070706_100023632 3300005467 Bacteria 5659
23 Ga0070707_100024472 3300005468 Bacteria 5719
24 Ga0070698_100130350 3300005471 Bacteria 2470
25 Ga0070699_100068824 3300005518 Bacteria 3075
26 Ga0070679_100228702 3300005530 Bacteria 1820
27 Ga0070684_100002516 3300005535 Bacteria 13511
28 Ga0070684_100176462 3300005535 Bacteria 1942
29 Ga0070697_100004178 3300005536 Bacteria 11068
30 Ga0068853_100071834 3300005539 Unclassified 3015
31 Ga0070665_100021433 3300005548 Bacteria 6499
32 Ga0068855_100002359 3300005563 Bacteria 23307
33 Ga0068855_100031121 3300005563 Bacteria 6375
34 Ga0070664_100078458 3300005564 Bacteria 2840
35 Ga0068857_100151715 3300005577 Bacteria 2100
36 Ga0068856_100019998 3300005614 Bacteria 6500
37 Ga0068856_100048136 3300005614 Bacteria 4200
38 Ga0068856_100102813 3300005614 Bacteria 2851
39 Ga0068852_100010722 3300005616 Bacteria 6863
40 Ga0068852_100155717 3300005616 Bacteria 2129
41 Ga0068859_100268833 3300005617 Unclassified 1797
42 Ga0068866_10033734 3300005718 Bacteria 2486
43 Ga0068863_100119597 3300005841 Bacteria 2511
44 Ga0068858_100039986 3300005842 Bacteria 4348
45 Ga0068858_100123372 3300005842 Bacteria 2424
46 Ga0068862_100122461 3300005844 Bacteria 2294
47 Ga0097621_100035260 3300006237 Bacteria 3997
48 Ga0097621_100046851 3300006237 Bacteria 3500
49 Ga0097621_100056991 3300006237 Bacteria 3193
50 Ga0068871_100005894 3300006358 Bacteria 8616
51 Ga0068871_100018334 3300006358 Bacteria 5317
52 Ga0068865_100008839 3300006881 Bacteria 6229
53 Ga0097620_100268837 3300006931 Unclassified 1797
54 Ga0105240_10033892 3300009093 Bacteria 6593
55 Ga0105240_10043920 3300009093 Bacteria 5683
56 Ga0105240_10058641 3300009093 Bacteria 4806
57 Ga0111539_10005445 3300009094 Bacteria 16466
58 Ga0105245_10004558 3300009098 Bacteria 12229
59 Ga0105245_10014853 3300009098 Bacteria 6782
60 Ga0105241_10006754 3300009174 Bacteria 8440
61 Ga0105241_10014508 3300009174 Bacteria 5770
62 Ga0105241_10034075 3300009174 Bacteria 3825
63 Ga0105242_10002780 3300009176 Bacteria 13699
64 Ga0105242_10015470 3300009176 Bacteria 5925
65 Ga0105242_10036189 3300009176 Bacteria 3959
66 Ga0105248_10007501 3300009177 Bacteria 11966
67 Ga0105248_10009691 3300009177 Bacteria 10611
68 Ga0105248_10056493 3300009177 Bacteria 4404
69 Ga0105248_10316499 3300009177 Bacteria 1758
70 Ga0105237_10004640 3300009545 Bacteria 15835
71 Ga0105237_10014307 3300009545 Bacteria 8305
72 Ga0105237_10073781 3300009545 Bacteria 3404
73 Ga0105237_10083988 3300009545 Bacteria 3175
74 Ga0105237_10089913 3300009545 Bacteria 3060
75 Ga0105237_10093089 3300009545 Bacteria 3003
76 Ga0105237_10175240 3300009545 Unclassified 2145
77 Ga0105238_10003161 3300009551 Bacteria 16429
78 Ga0105238_10003516 3300009551 Bacteria 15607
79 Ga0105238_10033971 3300009551 Bacteria 5189
80 Ga0105249_10003880 3300009553 Bacteria 12913
81 Ga0105249_10007198 3300009553 Bacteria 9716
82 Ga0105239_10007748 3300010375 Bacteria 12293
83 Ga0105239_10078601 3300010375 Bacteria 3631
84 Ga0105239_10204980 3300010375 Bacteria 2210
85 Ga0105246_10018500 3300011119 Bacteria 4442
86 Ga0157370_10002780 3300013104 Bacteria 20911
87 Ga0157369_10005424 3300013105 Bacteria 14836
88 Ga0157369_10024433 3300013105 Bacteria 6722
89 Ga0157369_10073901 3300013105 Bacteria 3657
90 Ga0157369_10084019 3300013105 Bacteria 3404
91 Ga0157374_10069997 3300013296 Bacteria 3304
92 Ga0157374_10242443 3300013296 Bacteria 1773
93 Ga0157378_10063841 3300013297 Bacteria 3292
94 Ga0163162_10030638 3300013306 Bacteria 5330
95 Ga0163162_10068606 3300013306 Bacteria 3598
96 Ga0157372_10029825 3300013307 Bacteria 5961
97 Ga0157372_10062982 3300013307 Bacteria 4157
98 Ga0157372_10153159 3300013307 Bacteria 2662
99 Ga0157372_10213443 3300013307 Unclassified 2236
100 Ga0163163_10043370 3300014325 Bacteria 4410
101 Ga0163163_10067141 3300014325 Bacteria 3565
102 Ga0157380_10184850 3300014326 Bacteria 1834
103 Ga0157379_10029915 3300014968 Bacteria 4844
104 Ga0157379_10088416 3300014968 Unclassified 2779
105 Ga0157376_10018413 3300014969 Bacteria 5354
106 Ga0157376_10028430 3300014969 Bacteria 4443
107 Ga0163161_10096592 3300017792 Bacteria 2193
108 Ga0213872_10006748 3300021361 Bacteria 5717
109 Ga0207656_10048082 3300025321 Bacteria 1836
110 Ga0207680_10093829 3300025903 Bacteria 1915
111 Ga0207647_10005889 3300025904 Bacteria 8934
112 Ga0207705_10000299 3300025909 Bacteria 46209
113 Ga0207705_10092146 3300025909 Bacteria 2220
114 Ga0207684_10000884 3300025910 Bacteria 34210
115 Ga0207654_10005527 3300025911 Bacteria 6394
116 Ga0207654_10012342 3300025911 Bacteria 4378
117 Ga0207654_10047228 3300025911 Bacteria 2459
118 Ga0207707_10062452 3300025912 Bacteria 3242
119 Ga0207695_10027160 3300025913 Bacteria 6376
120 Ga0207671_10013782 3300025914 Bacteria 6419
121 Ga0207671_10167008 3300025914 Bacteria 1707
122 Ga0207660_10006323 3300025917 Bacteria 7678
123 Ga0207657_10002404 3300025919 Bacteria 20242
124 Ga0207657_10014333 3300025919 Bacteria 7743
125 Ga0207646_10005382 3300025922 Bacteria 13470
126 Ga0207694_10007943 3300025924 Bacteria 8026
127 Ga0207694_10025972 3300025924 Bacteria 4453
128 Ga0207694_10111524 3300025924 Bacteria 2176
129 Ga0207700_10012535 3300025928 Bacteria 5473
130 Ga0207644_10011224 3300025931 Bacteria 5923
131 Ga0207686_10035141 3300025934 Bacteria 3006
132 Ga0207686_10066152 3300025934 Bacteria 2307
133 Ga0207709_10039038 3300025935 Bacteria 2833
134 Ga0207704_10017771 3300025938 Bacteria 3696
135 Ga0207711_10000490 3300025941 Bacteria 40819
136 Ga0207711_10030328 3300025941 Unclassified 4560
137 Ga0207689_10060767 3300025942 Bacteria 3108
138 Ga0207661_10027968 3300025944 Bacteria 4314
139 Ga0207679_10071991 3300025945 Bacteria 2610
140 Ga0207667_10000544 3300025949 Bacteria 49743
141 Ga0207667_10003784 3300025949 Bacteria 18632
142 Ga0207667_10144801 3300025949 Bacteria 2446
143 Ga0207651_10064449 3300025960 Bacteria 2565
144 Ga0207712_10014028 3300025961 Bacteria 5143
145 Ga0207677_10032667 3300026023 Bacteria 3348
146 Ga0207703_10036321 3300026035 Bacteria 3921
147 Ga0207703_10072581 3300026035 Bacteria 2845
148 Ga0207639_10110724 3300026041 Bacteria 2237
149 Ga0207702_10130878 3300026078 Bacteria 2258
150 Ga0207641_10126299 3300026088 Bacteria 2290
151 Ga0207648_10013023 3300026089 Bacteria 7759
152 Ga0207648_10152810 3300026089 Bacteria 2037
153 Ga0207683_10083733 3300026121 Bacteria 2834
154 Ga0207698_10008115 3300026142 Bacteria 6619
155 Ga0268265_10106686 3300028380 Bacteria 2276
156 Ga0265338_10004497 3300028800 Bacteria 18802
157 Ga0265331_10007959 3300031250 Bacteria 6068
158 Ga0265331_10013988 3300031250 Bacteria 4292
159 Ga0265327_10003982 3300031251 Bacteria 13470
160 Ga0265316_10011964 3300031344 Bacteria 7798
161 Ga0265313_10003098 3300031595 Bacteria 13768
162 Ga0265314_10000189 3300031711 Bacteria 91501
163 Ga0265314_10016518 3300031711 Bacteria 5823
164 Ga0265314_10040599 3300031711 Bacteria 3338
165 Ga0265342_10004438 3300031712 Bacteria 11057
166 Ga0373934_0042890 3300035086 Unclassified 1788
167 Ga0373937_0012342 3300036401 Bacteria 7513
168 Ga0373937_0037451 3300036401 Bacteria 4420
169 Ga0395898_0074789 3300037466 Bacteria 3272
170 Ga0436364_0027973 3300037853 Bacteria 1976
171 Ga0436361_0213899 3300039447 Bacteria 16104
172 Ga0436361_0659358 3300039447 Bacteria 15108
173 Ga0436361_1221826 3300039447 Bacteria 5264
174 Ga0495592_0065219 3300046454 Unclassified 2667
175 Ga0495651_0008386 3300046462 Bacteria 7920
176 Ga0495580_0009085 3300046472 Bacteria 7838
177 Ga0495662_0009691 3300046476 Unclassified 4725
178 Ga0495662_0011139 3300046476 Bacteria 4394
179 Ga0495608_0098925 3300046511 Bacteria 1882
180 Ga0495618_0050508 3300046514 Bacteria 2627
181 Ga0495618_0065201 3300046514 Bacteria 2315
182 Ga0495628_0020552 3300046516 Bacteria 5442
183 Ga0495628_0034321 3300046516 Unclassified 4081
184 Ga0495652_0015081 3300046529 Bacteria 6924
185 Ga0495665_0026432 3300046531 Bacteria 3117
186 Ga0495586_0024366 3300046535 Bacteria 3235
187 Ga0495587_0013921 3300046536 Bacteria 5051
188 Ga0495587_0064621 3300046536 Bacteria 2138
189 Ga0495645_0115210 3300046543 Bacteria 1899
190 Ga0495667_0006828 3300046559 Bacteria 7748
191 Ga0495635_0028344 3300046663 Unclassified 3892
192 Ga0495657_0105181 3300046675 Bacteria 1794
193 Ga0495599_0013656 3300046678 Bacteria 5020
194 Ga0495599_0019900 3300046678 Bacteria 4181
195 Ga0495599_0065930 3300046678 Bacteria 2262
196 Ga0495623_0009120 3300046679 Bacteria 6436
197 Ga0495623_0090095 3300046679 Unclassified 1884
198 Ga0495613_0000240 3300046689 Bacteria 51775
199 Ga0495613_0063845 3300046689 Bacteria 2694
200 Ga0495600_0046041 3300046809 Unclassified 2847
201 Ga0495604_0019886 3300047317 Bacteria 5371
202 Ga0495604_0051288 3300047317 Bacteria 3199
203 Ga0495674_0038423 3300047319 Bacteria 4296
204 Ga0495674_0043655 3300047319 Bacteria 3990
205 Ga0495680_0021502 3300047322 Bacteria 5399
206 Ga0495675_0001733 3300047444 Bacteria 13049
207 Ga0495684_0004770 3300047471 Bacteria 10597
208 Ga0495602_0011221 3300048088 Bacteria 9265
209 Ga0501073_0057314 3300049589 Bacteria 2724
210 nmdc:mga09592_160125_c1 3300050508 Bacteria 1944
211 nmdc:mga08y16_34355_c1 3300050511 Bacteria 5326
212 Ga0500595_000926 3300053119 Bacteria 16625

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046679 Ga0495623_0009120 Ga0495623_0009120_4403_5674 394
2 3300013307 Ga0157372_10153159 Ga0157372_101531593 401
3 3300046454 Ga0495592_0065219 Ga0495592_0065219_103_1344 402
4 3300013307 Ga0157372_10213443 Ga0157372_102134432 426
5 3300005841 Ga0068863_100119597 Ga0068863_1001195972 430
6 3300026088 Ga0207641_10126299 Ga0207641_101262991 430
7 3300006237 Ga0097621_100056991 Ga0097621_1000569913 434
8 3300009553 Ga0105249_10007198 Ga0105249_100071985 438
9 3300036401 Ga0373937_0037451 Ga0373937_0037451_898_2304 441
10 3300046535 Ga0495586_0024366 Ga0495586_0024366_49_1455 441
11 3300046678 Ga0495599_0065930 Ga0495599_0065930_537_1943 441
12 3300005617 Ga0068859_100268833 Ga0068859_1002688332 443
13 3300006931 Ga0097620_100268837 Ga0097620_1002688372 443
14 3300025961 Ga0207712_10014028 Ga0207712_100140282 447
15 3300005842 Ga0068858_100039986 Ga0068858_1000399864 453
16 3300009177 Ga0105248_10007501 Ga0105248_100075019 453
17 3300009545 Ga0105237_10014307 Ga0105237_100143073 453
18 3300009551 Ga0105238_10003161 Ga0105238_1000316112 453
19 3300009553 Ga0105249_10003880 Ga0105249_100038808 453
20 3300025914 Ga0207671_10167008 Ga0207671_101670082 453
21 3300025924 Ga0207694_10111524 Ga0207694_101115242 453
22 3300025941 Ga0207711_10000490 Ga0207711_1000049027 453
23 3300026035 Ga0207703_10036321 Ga0207703_100363213 453
24 3300006358 Ga0068871_100018334 Ga0068871_1000183345 457
25 3300009098 Ga0105245_10014853 Ga0105245_100148535 457
26 3300009177 Ga0105248_10316499 Ga0105248_103164992 457
27 3300005329 Ga0070683_100000886 Ga0070683_1000008866 459
28 3300005329 Ga0070683_100005864 Ga0070683_10000586411 459
29 3300005329 Ga0070683_100013213 Ga0070683_1000132131 459
30 3300005335 Ga0070666_10065086 Ga0070666_100650862 459
31 3300005366 Ga0070659_100044944 Ga0070659_1000449442 459
32 3300005434 Ga0070709_10063790 Ga0070709_100637902 459
33 3300005457 Ga0070662_100093390 Ga0070662_1000933902 459
34 3300005459 Ga0068867_100055522 Ga0068867_1000555221 459
35 3300005459 Ga0068867_100124999 Ga0068867_1001249991 459
36 3300005535 Ga0070684_100002516 Ga0070684_10000251611 459
37 3300005535 Ga0070684_100176462 Ga0070684_1001764622 459
38 3300005539 Ga0068853_100071834 Ga0068853_1000718342 459
39 3300005563 Ga0068855_100031121 Ga0068855_1000311215 459
40 3300005564 Ga0070664_100078458 Ga0070664_1000784582 459
41 3300005614 Ga0068856_100019998 Ga0068856_1000199986 459
42 3300005718 Ga0068866_10033734 Ga0068866_100337342 459
43 3300005842 Ga0068858_100123372 Ga0068858_1001233722 459
44 3300009093 Ga0105240_10058641 Ga0105240_100586413 459
45 3300009098 Ga0105245_10004558 Ga0105245_100045584 459
46 3300009174 Ga0105241_10006754 Ga0105241_100067546 459
47 3300009176 Ga0105242_10002780 Ga0105242_100027802 459
48 3300009176 Ga0105242_10015470 Ga0105242_100154705 459
49 3300009177 Ga0105248_10009691 Ga0105248_100096915 459
50 3300009545 Ga0105237_10004640 Ga0105237_1000464012 459
51 3300009545 Ga0105237_10073781 Ga0105237_100737813 459
52 3300009551 Ga0105238_10003516 Ga0105238_1000351611 459
53 3300010375 Ga0105239_10007748 Ga0105239_1000774810 459
54 3300013105 Ga0157369_10024433 Ga0157369_100244333 459
55 3300013296 Ga0157374_10242443 Ga0157374_102424432 459
56 3300013307 Ga0157372_10029825 Ga0157372_100298252 459
57 3300014325 Ga0163163_10067141 Ga0163163_100671414 459
58 3300014968 Ga0157379_10088416 Ga0157379_100884162 459
59 3300025903 Ga0207680_10093829 Ga0207680_100938292 459
60 3300025911 Ga0207654_10047228 Ga0207654_100472282 459
61 3300025914 Ga0207671_10013782 Ga0207671_100137826 459
62 3300025924 Ga0207694_10007943 Ga0207694_100079436 459
63 3300025928 Ga0207700_10012535 Ga0207700_100125353 459
64 3300025931 Ga0207644_10011224 Ga0207644_100112245 459
65 3300025934 Ga0207686_10035141 Ga0207686_100351412 459
66 3300025934 Ga0207686_10066152 Ga0207686_100661522 459
67 3300025935 Ga0207709_10039038 Ga0207709_100390382 459
68 3300025941 Ga0207711_10030328 Ga0207711_100303286 459
69 3300025942 Ga0207689_10060767 Ga0207689_100607671 459
70 3300025945 Ga0207679_10071991 Ga0207679_100719912 459
71 3300025949 Ga0207667_10144801 Ga0207667_101448012 459
72 3300025960 Ga0207651_10064449 Ga0207651_100644492 459
73 3300026089 Ga0207648_10152810 Ga0207648_101528101 459
74 3300031595 Ga0265313_10003098 Ga0265313_1000309812 459
75 3300031711 Ga0265314_10016518 Ga0265314_100165182 459
76 3300036401 Ga0373937_0012342 Ga0373937_0012342_841_2247 459
77 3300037853 Ga0436364_0027973 Ga0436364_0027973_214_1623 459
78 3300046543 Ga0495645_0115210 Ga0495645_0115210_286_1698 459
79 3300046514 Ga0495618_0065201 Ga0495618_0065201_872_2278 460
80 3300046511 Ga0495608_0098925 Ga0495608_0098925_264_1769 465
81 3300046516 Ga0495628_0020552 Ga0495628_0020552_908_2413 465
82 3300005336 Ga0070680_100005238 Ga0070680_1000052386 469
83 3300005563 Ga0068855_100002359 Ga0068855_10000235921 469
84 3300005616 Ga0068852_100010722 Ga0068852_1000107223 469
85 3300013104 Ga0157370_10002780 Ga0157370_100027804 469
86 3300013105 Ga0157369_10005424 Ga0157369_100054243 469
87 3300025917 Ga0207660_10006323 Ga0207660_100063235 469
88 3300025949 Ga0207667_10003784 Ga0207667_1000378420 469
89 3300026142 Ga0207698_10008115 Ga0207698_100081156 469
90 3300009551 Ga0105238_10033971 Ga0105238_100339712 471
91 3300046689 Ga0495613_0000240 Ga0495613_0000240_8752_10185 471
92 3300009545 Ga0105237_10083988 Ga0105237_100839883 472
93 3300046514 Ga0495618_0050508 Ga0495618_0050508_173_1678 472
94 3300047317 Ga0495604_0019886 Ga0495604_0019886_3509_5014 472
95 3300047319 Ga0495674_0038423 Ga0495674_0038423_82_1587 472
96 3300005577 Ga0068857_100151715 Ga0068857_1001517152 475
97 3300037466 Ga0395898_0074789 Ga0395898_0074789_630_2135 475
98 3300049589 Ga0501073_0057314 Ga0501073_0057314_772_2277 475
99 3300046476 Ga0495662_0011139 Ga0495662_0011139_246_1751 476
100 3300046675 Ga0495657_0105181 Ga0495657_0105181_241_1746 476
101 3300005327 Ga0070658_10033449 Ga0070658_100334492 481
102 3300005336 Ga0070680_100100908 Ga0070680_1001009082 481
103 3300005339 Ga0070660_100013989 Ga0070660_1000139895 481
104 3300005458 Ga0070681_10007647 Ga0070681_100076472 481
105 3300005530 Ga0070679_100228702 Ga0070679_1002287021 481
106 3300005614 Ga0068856_100048136 Ga0068856_1000481363 481
107 3300005616 Ga0068852_100155717 Ga0068852_1001557172 481
108 3300025909 Ga0207705_10092146 Ga0207705_100921461 481
109 3300025912 Ga0207707_10062452 Ga0207707_100624522 481
110 3300025919 Ga0207657_10014333 Ga0207657_100143333 481
111 3300025949 Ga0207667_10000544 Ga0207667_1000054429 481
112 3300026078 Ga0207702_10130878 Ga0207702_101308781 481
113 3300005327 Ga0070658_10143692 Ga0070658_101436922 482
114 3300009094 Ga0111539_10005445 Ga0111539_100054452 482
115 3300031251 Ga0265327_10003982 Ga0265327_100039828 482
116 3300050511 nmdc:mga08y16_34355_c1 nmdc:mga08y16_34355_c1_2859_4334 482
117 3300039447 Ga0436361_0213899 Ga0436361_0213899_5694_7238 483
118 3300046531 Ga0495665_0026432 Ga0495665_0026432_82_1587 483
119 3300046678 Ga0495599_0013656 Ga0495599_0013656_1951_3456 483
120 3300009093 Ga0105240_10033892 Ga0105240_100338924 484
121 3300009545 Ga0105237_10089913 Ga0105237_100899132 484
122 3300025913 Ga0207695_10027160 Ga0207695_100271603 484
123 3300025944 Ga0207661_10027968 Ga0207661_100279684 484
124 3300028800 Ga0265338_10004497 Ga0265338_100044975 484
125 3300031250 Ga0265331_10013988 Ga0265331_100139882 484
126 3300031711 Ga0265314_10040599 Ga0265314_100405992 484
127 3300005445 Ga0070708_100020867 Ga0070708_1000208675 485
128 3300005467 Ga0070706_100023632 Ga0070706_1000236325 485
129 3300005468 Ga0070707_100024472 Ga0070707_1000244725 485
130 3300005471 Ga0070698_100130350 Ga0070698_1001303502 485
131 3300005518 Ga0070699_100068824 Ga0070699_1000688243 485
132 3300005536 Ga0070697_100004178 Ga0070697_1000041782 485
133 3300010375 Ga0105239_10204980 Ga0105239_102049802 485
134 3300025910 Ga0207684_10000884 Ga0207684_1000088427 485
135 3300025922 Ga0207646_10005382 Ga0207646_100053826 485
136 3300031344 Ga0265316_10011964 Ga0265316_100119642 486
137 3300046536 Ga0495587_0064621 Ga0495587_0064621_451_1935 486
138 3300047319 Ga0495674_0043655 Ga0495674_0043655_500_1984 486
139 3300031250 Ga0265331_10007959 Ga0265331_100079592 487
140 3300031711 Ga0265314_10000189 Ga0265314_1000018940 487
141 3300031712 Ga0265342_10004438 Ga0265342_100044387 487
142 3300014969 Ga0157376_10028430 Ga0157376_100284302 488
143 3300035086 Ga0373934_0042890 Ga0373934_0042890_79_1566 488
144 3300046472 Ga0495580_0009085 Ga0495580_0009085_4387_5889 488
145 3300046476 Ga0495662_0009691 Ga0495662_0009691_1309_2796 488
146 3300046516 Ga0495628_0034321 Ga0495628_0034321_2500_3987 488
147 3300046663 Ga0495635_0028344 Ga0495635_0028344_916_2403 488
148 3300046679 Ga0495623_0090095 Ga0495623_0090095_313_1800 488
149 3300046809 Ga0495600_0046041 Ga0495600_0046041_1258_2745 488
150 3300053119 Ga0500595_000926 Ga0500595_000926_12274_13794 489
151 3300014326 Ga0157380_10184850 Ga0157380_101848502 490
152 3300014968 Ga0157379_10029915 Ga0157379_100299152 490
153 3300039447 Ga0436361_1221826 Ga0436361_1221826_703_2223 490
154 3300046462 Ga0495651_0008386 Ga0495651_0008386_963_2486 490
155 3300046529 Ga0495652_0015081 Ga0495652_0015081_4449_5972 490
156 3300046536 Ga0495587_0013921 Ga0495587_0013921_1500_3023 490
157 3300046559 Ga0495667_0006828 Ga0495667_0006828_70_1593 490
158 3300046678 Ga0495599_0019900 Ga0495599_0019900_1643_3166 490
159 3300046689 Ga0495613_0063845 Ga0495613_0063845_211_1734 490
160 3300047317 Ga0495604_0051288 Ga0495604_0051288_693_2216 490
161 3300047322 Ga0495680_0021502 Ga0495680_0021502_2902_4425 490
162 3300047444 Ga0495675_0001733 Ga0495675_0001733_5138_6661 490
163 3300047471 Ga0495684_0004770 Ga0495684_0004770_2921_4444 490
164 3300048088 Ga0495602_0011221 Ga0495602_0011221_4826_6349 490
165 3300050508 nmdc:mga09592_160125_c1 nmdc:mga09592_160125_c1_323_1828 490
166 3300006237 Ga0097621_100046851 Ga0097621_1000468513 491
167 3300006358 Ga0068871_100005894 Ga0068871_1000058944 491
168 3300006881 Ga0068865_100008839 Ga0068865_1000088395 491
169 3300009176 Ga0105242_10036189 Ga0105242_100361892 491
170 3300013105 Ga0157369_10084019 Ga0157369_100840193 491
171 3300013306 Ga0163162_10068606 Ga0163162_100686063 491
172 3300014969 Ga0157376_10018413 Ga0157376_100184133 491
173 3300017792 Ga0163161_10096592 Ga0163161_100965922 491
174 3300021361 Ga0213872_10006748 Ga0213872_100067485 491
175 3300025904 Ga0207647_10005889 Ga0207647_100058899 491
176 3300025938 Ga0207704_10017771 Ga0207704_100177713 491
177 3300026089 Ga0207648_10013023 Ga0207648_100130232 491
178 3300026121 Ga0207683_10083733 Ga0207683_100837332 491
179 3300039447 Ga0436361_0659358 Ga0436361_0659358_1036_2556 491
180 3300005327 Ga0070658_10000143 Ga0070658_1000014333 492
181 3300005327 Ga0070658_10054033 Ga0070658_100540332 492
182 3300005329 Ga0070683_100060770 Ga0070683_1000607703 492
183 3300005339 Ga0070660_100001899 Ga0070660_1000018994 492
184 3300005548 Ga0070665_100021433 Ga0070665_1000214337 492
185 3300005614 Ga0068856_100102813 Ga0068856_1001028131 492
186 3300005844 Ga0068862_100122461 Ga0068862_1001224611 492
187 3300009174 Ga0105241_10034075 Ga0105241_100340753 492
188 3300009177 Ga0105248_10056493 Ga0105248_100564933 492
189 3300009545 Ga0105237_10093089 Ga0105237_100930893 492
190 3300010375 Ga0105239_10078601 Ga0105239_100786011 492
191 3300013105 Ga0157369_10073901 Ga0157369_100739013 492
192 3300013296 Ga0157374_10069997 Ga0157374_100699971 492
193 3300013297 Ga0157378_10063841 Ga0157378_100638412 492
194 3300013306 Ga0163162_10030638 Ga0163162_100306386 492
195 3300013307 Ga0157372_10062982 Ga0157372_100629824 492
196 3300014325 Ga0163163_10043370 Ga0163163_100433705 492
197 3300025321 Ga0207656_10048082 Ga0207656_100480821 492
198 3300025909 Ga0207705_10000299 Ga0207705_1000029933 492
199 3300025911 Ga0207654_10012342 Ga0207654_100123423 492
200 3300025919 Ga0207657_10002404 Ga0207657_1000240411 492
201 3300025924 Ga0207694_10025972 Ga0207694_100259721 492
202 3300026023 Ga0207677_10032667 Ga0207677_100326671 492
203 3300026035 Ga0207703_10072581 Ga0207703_100725812 492
204 3300026041 Ga0207639_10110724 Ga0207639_101107241 492
205 3300028380 Ga0268265_10106686 Ga0268265_101066862 492
206 3300009093 Ga0105240_10043920 Ga0105240_100439207 494
207 3300009545 Ga0105237_10175240 Ga0105237_101752402 494
208 3300003323 rootH1_10062459 rootH1_100624592 500
209 3300006237 Ga0097621_100035260 Ga0097621_1000352604 500
210 3300009174 Ga0105241_10014508 Ga0105241_100145087 500
211 3300011119 Ga0105246_10018500 Ga0105246_100185005 500
212 3300025911 Ga0207654_10005527 Ga0207654_100055272 500

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

440

515

0.98

PF00501

AMP-binding

AMP-binding enzyme

46

390

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m2t-assembly1.cif.gz_A the crystal structure of benzoate coenzyme a ligase double mutant (h333a/i334a) in complex with 2-methyl-thiazole-5 carboxylate-amp 0.9314 8 495
3etc-assembly3.cif.gz_B 2.1 a structure of acyl-adenylate synthetase from methanosarcina acetivorans containing a link between lys256 and cys298 0.9294 6 480
4rm3-assembly2.cif.gz_B crystal structure of a benzoate coenzyme a ligase with 2-furoic acid 0.9284 8 493
3etc-assembly2.cif.gz_A 2.1 a structure of acyl-adenylate synthetase from methanosarcina acetivorans containing a link between lys256 and cys298 0.924 6 477
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.9225 10 394
ID Description Score Start End Superfamily
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9836 398 494 3.30.300.30
af_Q9VXZ8_496_596_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9789 397 493 3.30.300.30
af_Q9VCC6_436_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9759 397 499 3.30.300.30
af_Q9LQS1_441_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9726 398 494 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9711 398 492 3.30.300.30
ID Description Score Start End GO Terms
AF-X0Y3T5-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9721 317 392
AF-A0A2K3LEK0-F1-model_v4 4-coumarate-CoA ligase 7-like protein 0.9703 406 499 GO:0016405
AF-J1ZYK7-F1-model_v4 4-coumarate:CoA ligase 0.96 408 497 GO:0016405
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9585 394 500 GO:0016405
AF-A0A2D9F669-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9556 398 494 GO:0006631
GO:0031956

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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