F322204

General Info

Members Datasets Scaffolds Average Seq Length
211 137 422 325

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221576|2643892557
Length 369
Sequence RACRHGSTAQLTLVETTHESAPTAAPTSLLRRITVLSGGMGGAKFLQGLLHGIASGQLPGVAPDAHVTVLANTGDDWWIHGLKVCPDLDTVMYTLGEGIDLERGWGRREETWSAKEELASYGVEPTWFGLGDRDIATHLVRTQMLDAGYPLSAVTEALCRRWLTPTYGDRLTLLPMTDDRVETHVAIADPEAVSGKRVVHFQEYWVRLHAEVPAETVVFVGLDQSTPAPGVVDAITNADLVILPPSNPVVSVGTILGVPGVRDAVRATKARVVGLSPIVGTSHVRGMAEQMLNSVGVEVSAAGVGLNYGARSNGGVLDGWLIDERDAEQVARLEAAGLPTVAVPLMMTDHDATAAMAAAAISLVAPWAR

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
64 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
65 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
66 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
67 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
68 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
69 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
70 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
77 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
78 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
79 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
80 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
81 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
100 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
109 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
110 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
111 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
112 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
113 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
116 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
117 2643221576 Nocardioides sp. Root614 Isolate Unclassified
118 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
119 2643221561 Nocardioides sp. Root151 Isolate Unclassified
120 2643221590 Nocardioides sp. Root682 Isolate Unclassified
121 2643221604 Nocardioides sp. Root190 Isolate Unclassified
122 2643221615 Nocardioides sp. Root224 Isolate Unclassified
123 2643221617 Nocardioides sp. Root79 Isolate Unclassified
124 2643221620 Nocardioides sp. Root240 Isolate Unclassified
125 2643221641 Nocardioides sp. Root122 Isolate Unclassified
126 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
127 2643221696 Nocardioides sp. Root140 Isolate Unclassified
128 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
129 2738541305 Nocardioides sp. CF167 Isolate Unclassified
130 2739367898 Nocardioides sp. CF479 Isolate Unclassified
131 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
132 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
133 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
134 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
135 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
136 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
137 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.57
Metatranscriptomes 0.47
Isolates 9.95

Biome Distribution

Category Percentage (%)
Aerial Root 0.95
Bulb 0
Endosphere 19.91
Nodule 0
Rhizoplane 9
Rhizosphere 61.61
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1001953 3300000549 Bacteria 2973
2 JGI24735J21928_10018716 3300002067 Bacteria 2134
3 Ga0070658_10051492 3300005327 Bacteria 3337
4 Ga0070683_100000255 3300005329 Bacteria 36630
5 Ga0070667_100098268 3300005367 Bacteria 2526
6 Ga0070698_100000984 3300005471 Bacteria 31337
7 Ga0070679_100055949 3300005530 Bacteria 3929
8 Ga0070684_100014727 3300005535 Bacteria 6345
9 Ga0070684_100182592 3300005535 Bacteria 1908
10 Ga0070665_100036709 3300005548 Bacteria 4928
11 Ga0068855_100013566 3300005563 Bacteria 9827
12 Ga0070664_100084963 3300005564 Bacteria 2733
13 Ga0068857_100010140 3300005577 Bacteria 8188
14 Ga0068864_100168352 3300005618 Bacteria 1996
15 Ga0068861_100010263 3300005719 Bacteria 6501
16 Ga0068858_100218479 3300005842 Bacteria 1805
17 Ga0068860_100245945 3300005843 Bacteria 1740
18 Ga0075365_10002906 3300006038 Bacteria 8640
19 Ga0075365_10012842 3300006038 Bacteria 4990
20 Ga0075365_10037554 3300006038 Bacteria 3145
21 Ga0075365_10076573 3300006038 Bacteria 2259
22 Ga0075365_10155621 3300006038 Bacteria 1591
23 Ga0075365_10203765 3300006038 Bacteria 1386
24 Ga0075368_10011327 3300006042 Bacteria 3242
25 Ga0075363_100005276 3300006048 Bacteria 5734
26 Ga0075363_100069445 3300006048 Bacteria 1911
27 Ga0075364_10009624 3300006051 Bacteria 5805
28 Ga0075364_10016118 3300006051 Bacteria 4645
29 Ga0075364_10069419 3300006051 Bacteria 2319
30 Ga0075364_10091011 3300006051 Bacteria 2024
31 Ga0075362_10005515 3300006177 Bacteria 4637
32 Ga0075367_10007770 3300006178 Bacteria 5515
33 Ga0075367_10024450 3300006178 Bacteria 3407
34 Ga0075367_10048268 3300006178 Bacteria 2507
35 Ga0075367_10061447 3300006178 Bacteria 2242
36 Ga0075370_10015367 3300006353 Bacteria 4097
37 Ga0075370_10029446 3300006353 Bacteria 3059
38 Ga0068871_100163276 3300006358 Bacteria 1906
39 Ga0075434_100505662 3300006871 Bacteria 1229
40 Ga0111539_10130858 3300009094 Bacteria 2938
41 Ga0105245_10002342 3300009098 Bacteria 17132
42 Ga0105242_10211199 3300009176 Bacteria 1730
43 Ga0105248_10119836 3300009177 Bacteria 2968
44 Ga0105248_10627576 3300009177 Bacteria 1212
45 Ga0105237_10402500 3300009545 Bacteria 1373
46 Ga0105249_10111429 3300009553 Bacteria 2588
47 Ga0105249_10171735 3300009553 Bacteria 2103
48 Ga0105239_10464291 3300010375 Bacteria 1437
49 Ga0105246_10010076 3300011119 Bacteria 5833
50 Ga0157369_10127130 3300013105 Bacteria 2701
51 Ga0163162_10044747 3300013306 Bacteria 4434
52 Ga0206354_10335929 3300020081 Bacteria 2144
53 Ga0207642_10043949 3300025899 Bacteria 1974
54 Ga0207688_10033831 3300025901 Bacteria 2828
55 Ga0207652_10050125 3300025921 Bacteria 3576
56 Ga0207687_10072822 3300025927 Bacteria 2459
57 Ga0207704_10106900 3300025938 Bacteria 1881
58 Ga0207691_10230919 3300025940 Bacteria 1602
59 Ga0207661_10004744 3300025944 Bacteria 9523
60 Ga0207661_10010911 3300025944 Bacteria 6560
61 Ga0207667_10139559 3300025949 Bacteria 2495
62 Ga0207712_10296214 3300025961 Bacteria 1326
63 Ga0207658_10057305 3300025986 Bacteria 2895
64 Ga0207674_10019926 3300026116 Bacteria 7258
65 Ga0207675_100025421 3300026118 Bacteria 5512
66 Ga0207675_100220544 3300026118 Bacteria 1827
67 Ga0268266_10002962 3300028379 Bacteria 17512
68 Ga0268264_10060307 3300028381 Bacteria 3179
69 Ga0307408_100201300 3300031548 Bacteria 1612
70 Ga0307405_10113715 3300031731 Bacteria 1838
71 Ga0307413_10104143 3300031824 Bacteria 1883
72 Ga0307410_10089483 3300031852 Bacteria 2181
73 Ga0307409_100068205 3300031995 Bacteria 2812
74 Ga0307409_100085832 3300031995 Bacteria 2560
75 Ga0307409_100154142 3300031995 Bacteria 1999
76 Ga0307416_100113069 3300032002 Bacteria 2398
77 Ga0307414_10197836 3300032004 Bacteria 1632
78 Ga0307415_100033675 3300032126 Bacteria 3327
79 Ga0307415_100156913 3300032126 Bacteria 1758
80 Ga0395900_0126080 3300037418 Bacteria 2626
81 Ga0395900_0282569 3300037418 Bacteria 1651
82 Ga0395898_0230675 3300037466 Bacteria 1766
83 Ga0395905_0303475 3300037471 Bacteria 1484
84 Ga0395901_0022316 3300038443 Bacteria 6487
85 Ga0395901_0069758 3300038443 Bacteria 3661
86 Ga0451853_3873247 3300041512 Bacteria 1873
87 Ga0451853_3962752 3300041512 Bacteria 1471
88 Ga0466972_0023654 3300044658 Bacteria 3054
89 Ga0466972_0107482 3300044658 Bacteria 1319
90 Ga0466965_0006879 3300044683 Bacteria 5201
91 Ga0466965_0067771 3300044683 Bacteria 1791
92 Ga0466965_0175929 3300044683 Bacteria 1128
93 Ga0466966_0015376 3300044684 Bacteria 5060
94 Ga0466966_0123369 3300044684 Bacteria 1590
95 Ga0466961_0021311 3300044693 Bacteria 4172
96 Ga0466961_0060099 3300044693 Bacteria 2417
97 Ga0466963_0008174 3300044694 Bacteria 6270
98 Ga0466963_0024691 3300044694 Bacteria 3827
99 Ga0466964_0005508 3300044706 Bacteria 4700
100 Ga0466971_0035202 3300044719 Bacteria 2245
101 Ga0466971_0077870 3300044719 Bacteria 1510
102 Ga0466970_0004297 3300044765 Bacteria 7007
103 Ga0466970_0008650 3300044765 Bacteria 5130
104 Ga0466970_0035850 3300044765 Bacteria 2627
105 Ga0466970_0064505 3300044765 Bacteria 1964
106 Ga0466970_0071572 3300044765 Bacteria 1865
107 Ga0466970_0080116 3300044765 Bacteria 1764
108 Ga0466970_0147542 3300044765 Bacteria 1298
109 Ga0466957_0002659 3300044842 Bacteria 9649
110 Ga0466957_0223828 3300044842 Bacteria 1243
111 Ga0466960_0055559 3300044901 Bacteria 1926
112 Ga0466958_0095713 3300045836 Bacteria 1841
113 Ga0466967_0011844 3300045976 Bacteria 6633
114 Ga0466967_0311212 3300045976 Bacteria 1517
115 Ga0496100_0137427 3300048903 Bacteria 1728
116 Ga0496102_0062764 3300048905 Bacteria 3402
117 Ga0496102_0070541 3300048905 Bacteria 3208
118 Ga0496104_0007462 3300048907 Bacteria 9665
119 Ga0496104_0181226 3300048907 Bacteria 2017
120 Ga0496105_0007146 3300048908 Bacteria 8614
121 Ga0496106_0265703 3300048909 Bacteria 1373
122 Ga0496108_0018120 3300048911 Bacteria 5762
123 Ga0496109_0002618 3300048912 Bacteria 15088
124 Ga0496109_0144572 3300048912 Bacteria 2224
125 Ga0496109_0321999 3300048912 Bacteria 1459
126 Ga0496110_0052349 3300048913 Bacteria 3588
127 Ga0496110_0150127 3300048913 Bacteria 2110
128 Ga0496110_0178121 3300048913 Bacteria 1930
129 Ga0496110_0265128 3300048913 Bacteria 1564
130 Ga0496111_0075209 3300048914 Bacteria 2461
131 Ga0496114_0083324 3300048917 Bacteria 2705
132 Ga0496114_0153288 3300048917 Bacteria 2000
133 Ga0496115_0033134 3300048918 Bacteria 4077
134 Ga0501031_0007347 3300049568 Bacteria 7185
135 Ga0501036_0039374 3300049572 Bacteria 4000
136 Ga0501037_0111837 3300049573 Bacteria 1967
137 Ga0501039_0037454 3300049575 Bacteria 3743
138 Ga0501039_0075706 3300049575 Bacteria 2616
139 Ga0501040_0161930 3300049576 Bacteria 1582
140 Ga0501041_0020452 3300049577 Bacteria 3958
141 Ga0501046_0159725 3300049580 Bacteria 1696
142 Ga0501048_0002026 3300049582 Bacteria 15389
143 Ga0501048_0094548 3300049582 Bacteria 2108
144 Ga0501067_0082535 3300049583 Bacteria 1782
145 Ga0501067_0109446 3300049583 Bacteria 1536
146 Ga0501070_0043953 3300049586 Bacteria 3717
147 Ga0501070_0181559 3300049586 Bacteria 1732
148 Ga0501071_0017740 3300049587 Bacteria 4915
149 Ga0501071_0074229 3300049587 Bacteria 2482
150 Ga0501071_0097083 3300049587 Bacteria 2169
151 Ga0501072_0075441 3300049588 Bacteria 2667
152 Ga0501072_0235037 3300049588 Bacteria 1460
153 Ga0501074_0027344 3300049590 Bacteria 4136
154 Ga0501076_0003614 3300049592 Bacteria 10863
155 Ga0501076_0302322 3300049592 Bacteria 1312
156 Ga0501079_0033630 3300049741 Bacteria 3944
157 Ga0501079_0191892 3300049741 Bacteria 1594
158 Ga0501080_0024796 3300049742 Bacteria 5562
159 Ga0501080_0145937 3300049742 Bacteria 2187
160 Ga0501081_0123218 3300049743 Bacteria 1848
161 Ga0501045_0013359 3300049824 Bacteria 5798
162 Ga0501045_0014285 3300049824 Bacteria 5627
163 Ga0501045_0038986 3300049824 Bacteria 3457
164 Ga0501045_0181986 3300049824 Bacteria 1566
165 nmdc:mga03n38_26718_c1 3300050490 Bacteria 2387
166 nmdc:mga00v17_19478_c1 3300050491 Bacteria 3875
167 nmdc:mga00v17_6767_c2 3300050491 Bacteria 4110
168 nmdc:mga00v17_7338_c1 3300050491 Bacteria 5876
169 nmdc:mga0yw44_18967_c1 3300050492 Bacteria 3782
170 nmdc:mga0yw44_2034_c1 3300050492 Bacteria 8424
171 nmdc:mga0yw44_22975_c1 3300050492 Bacteria 3507
172 nmdc:mga0yw44_38288_c1 3300050492 Bacteria 2836
173 nmdc:mga0yw44_38584_c1 3300050492 Bacteria 2828
174 nmdc:mga0yw44_49998_c1 3300050492 Bacteria 2526
175 nmdc:mga0yw44_6801_c1 3300050492 Bacteria 5559
176 nmdc:mga06z11_108403_c1 3300050494 Bacteria 1534
177 nmdc:mga06z11_146061_c1 3300050494 Bacteria 1341
178 nmdc:mga06z11_21101_c1 3300050494 Bacteria 3022
179 nmdc:mga04h51_1825_c1 3300050495 Bacteria 4978
180 nmdc:mga04h51_9341_c1 3300050495 Bacteria 2655
181 nmdc:mga07m45_15596_c1 3300050496 Bacteria 4058
182 nmdc:mga07m45_165982_c1 3300050496 Bacteria 1282
183 nmdc:mga07m45_6141_c1 3300050496 Bacteria 6058
184 Ga0500641_0089172 3300053096 Bacteria 1315
185 Ga0500593_001270 3300053117 Bacteria 9118
186 Ga0500573_0020600 3300053140 Bacteria 3777
187 Ga0501084_0177869 3300054114 Bacteria 1796
188 Ga0501084_0182400 3300054114 Bacteria 1772
189 Ga0501082_0155384 3300060353 Bacteria 1988
190 Ga0466962_0112569 3300061719 Bacteria 1311
191 2643892557 2643221576 Bacteria 5214352
192 2515855225 2515154155 Bacteria 7985436
193 2643824058 2643221561 Bacteria 4984412
194 2643961609 2643221590 Bacteria 5214697
195 2644032477 2643221604 Bacteria 5014917
196 2644091864 2643221615 Bacteria 5487866
197 2644102634 2643221617 Bacteria 5139111
198 2644118296 2643221620 Bacteria 5134593
199 2644231517 2643221641 Bacteria 4490190
200 2644321667 2643221657 Bacteria 5490246
201 2644533365 2643221696 Bacteria 5431823
202 2676473466 2675903058 Bacteria 6822861
203 2738870660 2738541305 Bacteria 4910150
204 2740167401 2739367898 Bacteria 4367674
205 2812334054 2811994874 Bacteria 5367947
206 2827631977 2827628540 Bacteria 6858585
207 2855389175 2855386786 Bacteria 4752232
208 2857486370 2857481737 Bacteria 4761446
209 2984580564 2984576629 Bacteria 4248407
210 2990258256 2990256926 Bacteria 4252839
211 2995467785 2995463766 Bacteria 8577691
212 LJQas_1001953
213 JGI24735J21928_10018716
214 Ga0070658_10051492
215 Ga0070683_100000255
216 Ga0070667_100098268
217 Ga0070698_100000984
218 Ga0070679_100055949
219 Ga0070684_100014727
220 Ga0070684_100182592
221 Ga0070665_100036709
222 Ga0068855_100013566
223 Ga0070664_100084963
224 Ga0068857_100010140
225 Ga0068864_100168352
226 Ga0068861_100010263
227 Ga0068858_100218479
228 Ga0068860_100245945
229 Ga0075365_10002906
230 Ga0075365_10012842
231 Ga0075365_10037554
232 Ga0075365_10076573
233 Ga0075365_10155621
234 Ga0075365_10203765
235 Ga0075368_10011327
236 Ga0075363_100005276
237 Ga0075363_100069445
238 Ga0075364_10009624
239 Ga0075364_10016118
240 Ga0075364_10069419
241 Ga0075364_10091011
242 Ga0075362_10005515
243 Ga0075367_10007770
244 Ga0075367_10024450
245 Ga0075367_10048268
246 Ga0075367_10061447
247 Ga0075370_10015367
248 Ga0075370_10029446
249 Ga0068871_100163276
250 Ga0075434_100505662
251 Ga0111539_10130858
252 Ga0105245_10002342
253 Ga0105242_10211199
254 Ga0105248_10119836
255 Ga0105248_10627576
256 Ga0105237_10402500
257 Ga0105249_10111429
258 Ga0105249_10171735
259 Ga0105239_10464291
260 Ga0105246_10010076
261 Ga0157369_10127130
262 Ga0163162_10044747
263 Ga0206354_10335929
264 Ga0207642_10043949
265 Ga0207688_10033831
266 Ga0207652_10050125
267 Ga0207687_10072822
268 Ga0207704_10106900
269 Ga0207691_10230919
270 Ga0207661_10004744
271 Ga0207661_10010911
272 Ga0207667_10139559
273 Ga0207712_10296214
274 Ga0207658_10057305
275 Ga0207674_10019926
276 Ga0207675_100025421
277 Ga0207675_100220544
278 Ga0268266_10002962
279 Ga0268264_10060307
280 Ga0307408_100201300
281 Ga0307405_10113715
282 Ga0307413_10104143
283 Ga0307410_10089483
284 Ga0307409_100068205
285 Ga0307409_100085832
286 Ga0307409_100154142
287 Ga0307416_100113069
288 Ga0307414_10197836
289 Ga0307415_100033675
290 Ga0307415_100156913
291 Ga0395900_0126080
292 Ga0395900_0282569
293 Ga0395898_0230675
294 Ga0395905_0303475
295 Ga0395901_0022316
296 Ga0395901_0069758
297 Ga0451853_3873247
298 Ga0451853_3962752
299 Ga0466972_0023654
300 Ga0466972_0107482
301 Ga0466965_0006879
302 Ga0466965_0067771
303 Ga0466965_0175929
304 Ga0466966_0015376
305 Ga0466966_0123369
306 Ga0466961_0021311
307 Ga0466961_0060099
308 Ga0466963_0008174
309 Ga0466963_0024691
310 Ga0466964_0005508
311 Ga0466971_0035202
312 Ga0466971_0077870
313 Ga0466970_0004297
314 Ga0466970_0008650
315 Ga0466970_0035850
316 Ga0466970_0064505
317 Ga0466970_0071572
318 Ga0466970_0080116
319 Ga0466970_0147542
320 Ga0466957_0002659
321 Ga0466957_0223828
322 Ga0466960_0055559
323 Ga0466958_0095713
324 Ga0466967_0011844
325 Ga0466967_0311212
326 Ga0496100_0137427
327 Ga0496102_0062764
328 Ga0496102_0070541
329 Ga0496104_0007462
330 Ga0496104_0181226
331 Ga0496105_0007146
332 Ga0496106_0265703
333 Ga0496108_0018120
334 Ga0496109_0002618
335 Ga0496109_0144572
336 Ga0496109_0321999
337 Ga0496110_0052349
338 Ga0496110_0150127
339 Ga0496110_0178121
340 Ga0496110_0265128
341 Ga0496111_0075209
342 Ga0496114_0083324
343 Ga0496114_0153288
344 Ga0496115_0033134
345 Ga0501031_0007347
346 Ga0501036_0039374
347 Ga0501037_0111837
348 Ga0501039_0037454
349 Ga0501039_0075706
350 Ga0501040_0161930
351 Ga0501041_0020452
352 Ga0501046_0159725
353 Ga0501048_0002026
354 Ga0501048_0094548
355 Ga0501067_0082535
356 Ga0501067_0109446
357 Ga0501070_0043953
358 Ga0501070_0181559
359 Ga0501071_0017740
360 Ga0501071_0074229
361 Ga0501071_0097083
362 Ga0501072_0075441
363 Ga0501072_0235037
364 Ga0501074_0027344
365 Ga0501076_0003614
366 Ga0501076_0302322
367 Ga0501079_0033630
368 Ga0501079_0191892
369 Ga0501080_0024796
370 Ga0501080_0145937
371 Ga0501081_0123218
372 Ga0501045_0013359
373 Ga0501045_0014285
374 Ga0501045_0038986
375 Ga0501045_0181986
376 nmdc:mga03n38_26718_c1
377 nmdc:mga00v17_19478_c1
378 nmdc:mga00v17_6767_c2
379 nmdc:mga00v17_7338_c1
380 nmdc:mga0yw44_18967_c1
381 nmdc:mga0yw44_2034_c1
382 nmdc:mga0yw44_22975_c1
383 nmdc:mga0yw44_38288_c1
384 nmdc:mga0yw44_38584_c1
385 nmdc:mga0yw44_49998_c1
386 nmdc:mga0yw44_6801_c1
387 nmdc:mga06z11_108403_c1
388 nmdc:mga06z11_146061_c1
389 nmdc:mga06z11_21101_c1
390 nmdc:mga04h51_1825_c1
391 nmdc:mga04h51_9341_c1
392 nmdc:mga07m45_15596_c1
393 nmdc:mga07m45_165982_c1
394 nmdc:mga07m45_6141_c1
395 Ga0500641_0089172
396 Ga0500593_001270
397 Ga0500573_0020600
398 Ga0501084_0177869
399 Ga0501084_0182400
400 Ga0501082_0155384
401 Ga0466962_0112569
402 2643892557
403 2515855225
404 2643824058
405 2643961609
406 2644032477
407 2644091864
408 2644102634
409 2644118296
410 2644231517
411 2644321667
412 2644533365
413 2676473466
414 2738870660
415 2740167401
416 2812334054
417 2827631977
418 2855389175
419 2857486370
420 2984580564
421 2990258256
422 2995467785

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01933

CofD

2-phospho-L-lactate transferase CofD

33

362

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c3e-assembly2.cif.gz_D crystal structure of 2-phospho-(s)-lactate transferase from methanosarcina mazei in complex with fo and gdp. northeast structural genomics consortium target mar46 0.9187 5 332
3c3e-assembly2.cif.gz_D crystal structure of 2-phospho-(s)-lactate transferase from methanosarcina mazei in complex with fo and gdp. northeast structural genomics consortium target mar46 0.9129 5 332
6uw7-assembly1.cif.gz_B the crystal structure of fbia from mycobacterium smegmatis, dehydro-f420-0 bound form 0.9008 2 331
6uw1-assembly1.cif.gz_B the crystal structure of fbia from mycobacterium smegmatis, fo bound form 0.8977 2 331
6uw7-assembly1.cif.gz_B the crystal structure of fbia from mycobacterium smegmatis, dehydro-f420-0 bound form 0.893 2 331
ID Description Score Start End Superfamily
3c3eA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;CofD-like domains 0.8845 137 332 3.40.50.10680
2ffeA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;CofD-like domain 0.8014 47 134 1.10.8.240
2ffeA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;CofD-like domain 0.786 47 134 1.10.8.240
af_Q57602_1_202_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7782 198 243 3.40.50.880
af_Q9VHN6_73_196_2.30.30.790 Mainly Beta;Roll;SH3 type barrels.; 0.7651 149 166 2.30.30.790
ID Description Score Start End GO Terms
AF-A0A1C4IZZ6-F1-model_v4 LPPG:FO 2-phospho-L-lactate transferase 0.9724 187 331 GO:0000287
GO:0043743
AF-A0A520EXW1-F1-model_v4 2-phospho-L-lactate transferase 0.9714 187 331 GO:0000287
GO:0043743
AF-A0A656TKP6-F1-model_v4 deleted 0.9699 141 331
AF-A0A6I2W125-F1-model_v4 2-phospho-L-lactate transferase 0.968 102 331 GO:0000287
GO:0043743
AF-A0A538IVF0-F1-model_v4 2-phospho-L-lactate transferase 0.9599 202 332 GO:0000287
GO:0043743

Map