F322032

General Info

Members Datasets Scaffolds Average Seq Length
211 149 422 196

Family's Representative Sequence

Representative Sequence 3300048915|Ga0496112_0618687|Ga0496112_0618687_198_710
Length 170
Sequence VVSGGFGVGKTTFVGAISEIEPLVTEADMTERSLGVDDTDGIDEKTTTTVALDFGRITLEDTLLLYLFGTPGQDRFAFLWDDLVDGALGAIIPSVDFFEERGTPFLLAVNNFDKAKRFDLAEVREALGVDMVVPVIECDARDRSSVKTVLVTLVEQVLAHRLHRLATTGA

Samples

Sample ID Description Type Environment
1 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
34 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
51 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
52 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
53 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
58 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
59 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
65 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
66 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
67 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
68 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
69 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
70 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
71 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
72 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
73 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
74 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
75 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
80 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
81 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
82 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
89 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
93 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
94 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
95 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
113 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
114 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
115 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
116 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
121 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
122 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
123 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
124 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
129 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
130 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
133 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
134 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
138 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
139 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
140 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
141 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
142 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
143 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
144 2734482000 Kineosporia rhizophila JCM 9960 Isolate Unclassified
145 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
146 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
147 2867475112 Streptomyces sp. TM32 Isolate Unclassified
148 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
149 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.21
Metatranscriptomes 0.47
Isolates 3.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.53
Nodule 0
Rhizoplane 1.9
Rhizosphere 67.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496112_0618687 3300048915 Bacteria 1014
2 rootL2_10098712 3300003322 Bacteria 3103
3 Ga0070658_10708671 3300005327 Bacteria 874
4 Ga0070683_100022891 3300005329 Bacteria 5587
5 Ga0070683_100366407 3300005329 Bacteria 1372
6 Ga0070670_100481779 3300005331 Bacteria 1102
7 Ga0070682_100175181 3300005337 Bacteria 1494
8 Ga0070682_100558065 3300005337 Bacteria 897
9 Ga0068868_100505699 3300005338 Bacteria 1059
10 Ga0070669_100162853 3300005353 Bacteria 1735
11 Ga0070674_100422263 3300005356 Bacteria 1094
12 Ga0070667_100323717 3300005367 Bacteria 1391
13 Ga0070678_100081951 3300005456 Bacteria 2448
14 Ga0070678_100271325 3300005456 Bacteria 1431
15 Ga0070678_100909427 3300005456 Bacteria 805
16 Ga0070685_10344068 3300005466 Bacteria 1018
17 Ga0070684_100025051 3300005535 Bacteria 5010
18 Ga0070665_100390274 3300005548 Bacteria 1400
19 Ga0070664_100406105 3300005564 Bacteria 1246
20 Ga0070664_100685605 3300005564 Bacteria 954
21 Ga0068857_100802631 3300005577 Bacteria 899
22 Ga0068859_100825606 3300005617 Bacteria 1014
23 Ga0068858_100153581 3300005842 Bacteria 2165
24 Ga0068860_100144190 3300005843 Bacteria 2291
25 Ga0068862_100044528 3300005844 Bacteria 3786
26 Ga0068862_100893824 3300005844 Bacteria 873
27 Ga0081539_10009251 3300005985 Bacteria 8289
28 Ga0097621_100896326 3300006237 Bacteria 826
29 Ga0068871_100363961 3300006358 Bacteria 1282
30 Ga0097620_100825650 3300006931 Bacteria 1014
31 Ga0111539_11464156 3300009094 Bacteria 792
32 Ga0105238_10869131 3300009551 Bacteria 919
33 Ga0157378_10277995 3300013297 Bacteria 1613
34 Ga0157378_10974644 3300013297 Bacteria 881
35 Ga0157375_10486734 3300013308 Bacteria 1398
36 Ga0163163_10279872 3300014325 Bacteria 1720
37 Ga0163163_10834467 3300014325 Bacteria 985
38 Ga0163163_10865649 3300014325 Bacteria 967
39 Ga0182008_10104049 3300014497 Bacteria 1404
40 Ga0157379_10203355 3300014968 Bacteria 1791
41 Ga0206352_10005138 3300020078 Bacteria 4992
42 Ga0213875_10003587 3300021388 Bacteria 8794
43 Ga0207643_10435451 3300025908 Bacteria 832
44 Ga0207652_10502853 3300025921 Bacteria 1091
45 Ga0207681_10117922 3300025923 Bacteria 1942
46 Ga0207689_10090231 3300025942 Bacteria 2518
47 Ga0207661_10015152 3300025944 Bacteria 5667
48 Ga0207679_10380958 3300025945 Bacteria 1237
49 Ga0207679_10688947 3300025945 Bacteria 927
50 Ga0207651_10627198 3300025960 Bacteria 942
51 Ga0207668_10000667 3300025972 Bacteria 21078
52 Ga0207658_10105746 3300025986 Bacteria 2214
53 Ga0207658_10138931 3300025986 Bacteria 1963
54 Ga0207703_10172344 3300026035 Bacteria 1904
55 Ga0207676_10540654 3300026095 Bacteria 1112
56 Ga0207676_10565500 3300026095 Bacteria 1088
57 Ga0207683_10156256 3300026121 Bacteria 2060
58 Ga0268265_10371012 3300028380 Bacteria 1313
59 Ga0268264_10186533 3300028381 Bacteria 1887
60 Ga0307517_10027730 3300028786 Bacteria 6787
61 Ga0307517_10051702 3300028786 Bacteria 4139
62 Ga0307517_10111771 3300028786 Bacteria 2074
63 Ga0307517_10177478 3300028786 Bacteria 1383
64 Ga0307515_10000044 3300028794 Bacteria 303041
65 Ga0307515_10000544 3300028794 Bacteria 88859
66 Ga0307515_10002464 3300028794 Bacteria 40245
67 Ga0307515_10008250 3300028794 Bacteria 20361
68 Ga0307515_10014043 3300028794 Bacteria 14898
69 Ga0307515_10022358 3300028794 Bacteria 11148
70 Ga0307515_10117734 3300028794 Bacteria 3038
71 Ga0307515_10120305 3300028794 Bacteria 2980
72 Ga0307511_10000584 3300030521 Bacteria 39032
73 Ga0307512_10002042 3300030522 Bacteria 26638
74 Ga0307512_10003586 3300030522 Bacteria 17788
75 Ga0307512_10057907 3300030522 Bacteria 3024
76 Ga0265328_10018096 3300031239 Bacteria 2721
77 Ga0265340_10002227 3300031247 Bacteria 11093
78 Ga0307513_10003836 3300031456 Bacteria 20240
79 Ga0307513_10003996 3300031456 Bacteria 19795
80 Ga0307509_10006894 3300031507 Bacteria 15094
81 Ga0307509_10026010 3300031507 Bacteria 6532
82 Ga0307509_10026155 3300031507 Bacteria 6511
83 Ga0307509_10161007 3300031507 Bacteria 2142
84 Ga0307509_10161500 3300031507 Bacteria 2137
85 Ga0307508_10001137 3300031616 Bacteria 30648
86 Ga0307508_10005144 3300031616 Bacteria 12521
87 Ga0307508_10023371 3300031616 Bacteria 5612
88 Ga0307508_10081501 3300031616 Bacteria 2817
89 Ga0307508_10335297 3300031616 Bacteria 1104
90 Ga0316579_10000086 3300031691 Bacteria 23939
91 Ga0307516_10000690 3300031730 Bacteria 45875
92 Ga0307516_10000888 3300031730 Bacteria 41189
93 Ga0307516_10007185 3300031730 Bacteria 12853
94 Ga0307516_10022334 3300031730 Bacteria 6499
95 Ga0307516_10128195 3300031730 Bacteria 2320
96 Ga0307405_10777593 3300031731 Bacteria 800
97 Ga0307410_10337489 3300031852 Bacteria 1200
98 Ga0307412_10385883 3300031911 Bacteria 1136
99 Ga0307412_10527604 3300031911 Bacteria 988
100 Ga0307409_100021937 3300031995 Bacteria 4391
101 Ga0307409_100098900 3300031995 Bacteria 2414
102 Ga0307414_10476660 3300032004 Bacteria 1100
103 Ga0307414_10591964 3300032004 Bacteria 994
104 Ga0307411_10213306 3300032005 Bacteria 1492
105 Ga0307415_100031681 3300032126 Bacteria 3409
106 Ga0307415_101100091 3300032126 Bacteria 744
107 Ga0307507_10007459 3300033179 Bacteria 15900
108 Ga0307507_10086712 3300033179 Bacteria 2712
109 Ga0307507_10207868 3300033179 Bacteria 1341
110 Ga0373950_0004244 3300034818 Bacteria 2090
111 Ga0373929_0140441 3300035085 Bacteria 640
112 Ga0373940_0001675 3300035088 Bacteria 4091
113 Ga0373940_0015641 3300035088 Bacteria 1869
114 Ga0373932_0035171 3300035112 Bacteria 1415
115 Ga0373939_0034317 3300035114 Bacteria 1488
116 Ga0373941_0012614 3300035115 Bacteria 2214
117 Ga0373941_0227564 3300035115 Bacteria 719
118 Ga0373954_0115189 3300035118 Bacteria 1302
119 Ga0373942_0000190 3300035207 Bacteria 15667
120 Ga0373942_0002480 3300035207 Bacteria 4479
121 Ga0373962_0002119 3300035242 Bacteria 4735
122 Ga0373962_0002241 3300035242 Bacteria 4624
123 Ga0373935_0142666 3300035692 Bacteria 1619
124 Ga0373937_0281030 3300036401 Bacteria 1572
125 Ga0436364_1234377 3300037853 Bacteria 6041
126 Ga0451791_1104212 3300041451 Bacteria 826
127 Ga0451798_0958628 3300041458 Bacteria 660
128 Ga0451839_1594112 3300041496 Bacteria 671
129 Ga0451853_0092639 3300041512 Bacteria 2288
130 Ga0451853_1723285 3300041512 Bacteria 3040
131 Ga0466969_0017657 3300044656 Bacteria 3723
132 Ga0466961_0051204 3300044693 Bacteria 2637
133 Ga0466971_0010347 3300044719 Bacteria 4075
134 Ga0466959_0009075 3300045049 Bacteria 7057
135 Ga0466958_0097478 3300045836 Bacteria 1825
136 Ga0495592_0389819 3300046454 Bacteria 884
137 Ga0495603_0233966 3300046455 Bacteria 1059
138 Ga0495629_0096764 3300046459 Bacteria 2059
139 Ga0495653_0341760 3300046463 Bacteria 964
140 Ga0495580_0004400 3300046472 Bacteria 11834
141 Ga0495662_0083308 3300046476 Bacteria 1556
142 Ga0495664_0005465 3300046477 Bacteria 6978
143 Ga0495583_0241727 3300046506 Bacteria 725
144 Ga0495608_0044921 3300046511 Bacteria 2946
145 Ga0495620_0144243 3300046515 Bacteria 930
146 Ga0495628_0005490 3300046516 Bacteria 11101
147 Ga0495630_0157156 3300046517 Bacteria 1730
148 Ga0495632_0018102 3300046519 Bacteria 3873
149 Ga0495632_0023750 3300046519 Bacteria 3269
150 Ga0495652_0062532 3300046529 Bacteria 3138
151 Ga0495665_0031148 3300046531 Bacteria 2854
152 Ga0495640_0002079 3300046533 Bacteria 15962
153 Ga0495640_0036356 3300046533 Bacteria 3480
154 Ga0495586_0093302 3300046535 Bacteria 1665
155 Ga0495645_0012188 3300046543 Bacteria 6054
156 Ga0495634_0023053 3300046642 Bacteria 4381
157 Ga0495634_0070412 3300046642 Bacteria 2305
158 Ga0495625_0068550 3300046660 Bacteria 2493
159 Ga0495635_0037935 3300046663 Bacteria 3335
160 Ga0495588_0008231 3300046674 Bacteria 4774
161 Ga0495657_0019127 3300046675 Bacteria 4945
162 Ga0495657_0095653 3300046675 Bacteria 1898
163 Ga0495599_0085049 3300046678 Bacteria 1975
164 Ga0495623_0123448 3300046679 Bacteria 1556
165 Ga0495646_0183617 3300046680 Bacteria 1146
166 Ga0495624_0122358 3300046690 Bacteria 1597
167 Ga0495671_0013769 3300046692 Bacteria 4368
168 Ga0495589_0324549 3300046794 Bacteria 711
169 Ga0495600_0017968 3300046809 Bacteria 4501
170 Ga0495581_0024534 3300047315 Bacteria 3495
171 Ga0495604_0000511 3300047317 Bacteria 34056
172 Ga0495636_0001122 3300047318 Bacteria 10101
173 Ga0495636_0240957 3300047318 Bacteria 834
174 Ga0495687_001804 3300047443 Bacteria 18856
175 Ga0495687_002240 3300047443 Bacteria 15950
176 Ga0495685_037448 3300047447 Bacteria 1663
177 Ga0495681_0000604 3300047470 Bacteria 27433
178 Ga0495684_0200452 3300047471 Bacteria 1471
179 Ga0495602_0084841 3300048088 Bacteria 2648
180 Ga0495614_0006431 3300048089 Bacteria 5276
181 Ga0496108_0000468 3300048911 Bacteria 32327
182 Ga0495601_0026432 3300053077 Bacteria 3584
183 Ga0495601_0114209 3300053077 Bacteria 1751
184 Ga0500610_0204957 3300053079 Bacteria 947
185 Ga0495655_0023640 3300053083 Bacteria 1419
186 Ga0495619_0008807 3300053085 Bacteria 6383
187 Ga0500644_0015889 3300053088 Bacteria 2157
188 Ga0500646_0000089 3300053090 Bacteria 25903
189 Ga0500583_0030490 3300053092 Bacteria 2363
190 Ga0500583_0030952 3300053092 Bacteria 2348
191 Ga0500651_0064383 3300053093 Bacteria 2286
192 Ga0500641_0029275 3300053096 Bacteria 2157
193 Ga0500650_0079370 3300053098 Bacteria 1534
194 Ga0500650_0159156 3300053098 Bacteria 1042
195 Ga0500650_0178982 3300053098 Bacteria 972
196 Ga0500569_008788 3300053109 Bacteria 2323
197 Ga0500569_019483 3300053109 Bacteria 1766
198 Ga0500652_006757 3300053131 Bacteria 3713
199 Ga0500652_150460 3300053131 Bacteria 966
200 Ga0500652_197889 3300053131 Bacteria 816
201 Ga0500588_0004245 3300053146 Bacteria 3090
202 Ga0500600_0027261 3300053149 Bacteria 3387
203 Ga0500600_0115015 3300053149 Bacteria 1396
204 Ga0466962_0000980 3300061719 Bacteria 12990
205 2515722129 2515154129 Bacteria 5584369
206 2734972303 2734482000 Bacteria 5525167
207 2753263490 2751185782 Bacteria 11227053
208 2831935851 2831935698 Bacteria 5963223
209 2867479758 2867475112 Bacteria 6909112
210 2867511571 2867507094 Bacteria 6506033
211 8054167174 8054160619 Bacteria 7783213
212 Ga0496112_0618687
213 rootL2_10098712
214 Ga0070658_10708671
215 Ga0070683_100022891
216 Ga0070683_100366407
217 Ga0070670_100481779
218 Ga0070682_100175181
219 Ga0070682_100558065
220 Ga0068868_100505699
221 Ga0070669_100162853
222 Ga0070674_100422263
223 Ga0070667_100323717
224 Ga0070678_100081951
225 Ga0070678_100271325
226 Ga0070678_100909427
227 Ga0070685_10344068
228 Ga0070684_100025051
229 Ga0070665_100390274
230 Ga0070664_100406105
231 Ga0070664_100685605
232 Ga0068857_100802631
233 Ga0068859_100825606
234 Ga0068858_100153581
235 Ga0068860_100144190
236 Ga0068862_100044528
237 Ga0068862_100893824
238 Ga0081539_10009251
239 Ga0097621_100896326
240 Ga0068871_100363961
241 Ga0097620_100825650
242 Ga0111539_11464156
243 Ga0105238_10869131
244 Ga0157378_10277995
245 Ga0157378_10974644
246 Ga0157375_10486734
247 Ga0163163_10279872
248 Ga0163163_10834467
249 Ga0163163_10865649
250 Ga0182008_10104049
251 Ga0157379_10203355
252 Ga0206352_10005138
253 Ga0213875_10003587
254 Ga0207643_10435451
255 Ga0207652_10502853
256 Ga0207681_10117922
257 Ga0207689_10090231
258 Ga0207661_10015152
259 Ga0207679_10380958
260 Ga0207679_10688947
261 Ga0207651_10627198
262 Ga0207668_10000667
263 Ga0207658_10105746
264 Ga0207658_10138931
265 Ga0207703_10172344
266 Ga0207676_10540654
267 Ga0207676_10565500
268 Ga0207683_10156256
269 Ga0268265_10371012
270 Ga0268264_10186533
271 Ga0307517_10027730
272 Ga0307517_10051702
273 Ga0307517_10111771
274 Ga0307517_10177478
275 Ga0307515_10000044
276 Ga0307515_10000544
277 Ga0307515_10002464
278 Ga0307515_10008250
279 Ga0307515_10014043
280 Ga0307515_10022358
281 Ga0307515_10117734
282 Ga0307515_10120305
283 Ga0307511_10000584
284 Ga0307512_10002042
285 Ga0307512_10003586
286 Ga0307512_10057907
287 Ga0265328_10018096
288 Ga0265340_10002227
289 Ga0307513_10003836
290 Ga0307513_10003996
291 Ga0307509_10006894
292 Ga0307509_10026010
293 Ga0307509_10026155
294 Ga0307509_10161007
295 Ga0307509_10161500
296 Ga0307508_10001137
297 Ga0307508_10005144
298 Ga0307508_10023371
299 Ga0307508_10081501
300 Ga0307508_10335297
301 Ga0316579_10000086
302 Ga0307516_10000690
303 Ga0307516_10000888
304 Ga0307516_10007185
305 Ga0307516_10022334
306 Ga0307516_10128195
307 Ga0307405_10777593
308 Ga0307410_10337489
309 Ga0307412_10385883
310 Ga0307412_10527604
311 Ga0307409_100021937
312 Ga0307409_100098900
313 Ga0307414_10476660
314 Ga0307414_10591964
315 Ga0307411_10213306
316 Ga0307415_100031681
317 Ga0307415_101100091
318 Ga0307507_10007459
319 Ga0307507_10086712
320 Ga0307507_10207868
321 Ga0373950_0004244
322 Ga0373929_0140441
323 Ga0373940_0001675
324 Ga0373940_0015641
325 Ga0373932_0035171
326 Ga0373939_0034317
327 Ga0373941_0012614
328 Ga0373941_0227564
329 Ga0373954_0115189
330 Ga0373942_0000190
331 Ga0373942_0002480
332 Ga0373962_0002119
333 Ga0373962_0002241
334 Ga0373935_0142666
335 Ga0373937_0281030
336 Ga0436364_1234377
337 Ga0451791_1104212
338 Ga0451798_0958628
339 Ga0451839_1594112
340 Ga0451853_0092639
341 Ga0451853_1723285
342 Ga0466969_0017657
343 Ga0466961_0051204
344 Ga0466971_0010347
345 Ga0466959_0009075
346 Ga0466958_0097478
347 Ga0495592_0389819
348 Ga0495603_0233966
349 Ga0495629_0096764
350 Ga0495653_0341760
351 Ga0495580_0004400
352 Ga0495662_0083308
353 Ga0495664_0005465
354 Ga0495583_0241727
355 Ga0495608_0044921
356 Ga0495620_0144243
357 Ga0495628_0005490
358 Ga0495630_0157156
359 Ga0495632_0018102
360 Ga0495632_0023750
361 Ga0495652_0062532
362 Ga0495665_0031148
363 Ga0495640_0002079
364 Ga0495640_0036356
365 Ga0495586_0093302
366 Ga0495645_0012188
367 Ga0495634_0023053
368 Ga0495634_0070412
369 Ga0495625_0068550
370 Ga0495635_0037935
371 Ga0495588_0008231
372 Ga0495657_0019127
373 Ga0495657_0095653
374 Ga0495599_0085049
375 Ga0495623_0123448
376 Ga0495646_0183617
377 Ga0495624_0122358
378 Ga0495671_0013769
379 Ga0495589_0324549
380 Ga0495600_0017968
381 Ga0495581_0024534
382 Ga0495604_0000511
383 Ga0495636_0001122
384 Ga0495636_0240957
385 Ga0495687_001804
386 Ga0495687_002240
387 Ga0495685_037448
388 Ga0495681_0000604
389 Ga0495684_0200452
390 Ga0495602_0084841
391 Ga0495614_0006431
392 Ga0496108_0000468
393 Ga0495601_0026432
394 Ga0495601_0114209
395 Ga0500610_0204957
396 Ga0495655_0023640
397 Ga0495619_0008807
398 Ga0500644_0015889
399 Ga0500646_0000089
400 Ga0500583_0030490
401 Ga0500583_0030952
402 Ga0500651_0064383
403 Ga0500641_0029275
404 Ga0500650_0079370
405 Ga0500650_0159156
406 Ga0500650_0178982
407 Ga0500569_008788
408 Ga0500569_019483
409 Ga0500652_006757
410 Ga0500652_150460
411 Ga0500652_197889
412 Ga0500588_0004245
413 Ga0500600_0027261
414 Ga0500600_0115015
415 Ga0466962_0000980
416 2515722129
417 2734972303
418 2753263490
419 2831935851
420 2867479758
421 2867511571
422 8054167174

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03029

ATP_bind_1

Conserved hypothetical ATP binding protein

2

160

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kh0-assembly2.cif.gz_D crystal structure of hydf from thermosipho melanesiensis in complex with a [4fe-4s] cluster 0.7816 16 185
4w29-assembly1.cif.gz_AY 70s ribosome translocation intermediate containing elongation factor efg/gdp/fusidic acid, mrna, and trnas trapped in the ap/ap pe/e chimeric hybrid state. 0.7783 16 154
5kh0-assembly1.cif.gz_A crystal structure of hydf from thermosipho melanesiensis in complex with a [4fe-4s] cluster 0.7735 14 185
2al7-assembly1.cif.gz_A structure of human adp-ribosylation factor-like 10c 0.7718 13 186
6gxn-assembly1.cif.gz_w cryo-em structure of an e. coli 70s ribosome in complex with rf3-gdpcp, rf1(gaq) and pint-trna (state iii) 0.7641 15 154
ID Description Score Start End Superfamily
af_O50391_4_190_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.859 7 188 3.40.50.300
af_O50391_4_190_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8325 7 188 3.40.50.300
af_Q58735_1_154_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7992 15 185 3.40.50.300
2al7A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7718 13 186 3.40.50.300
af_Q58735_1_154_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7712 15 185 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3N6EKQ0-F1-model_v4 deleted 0.9884 98 187
AF-A0A1Z1WN97-F1-model_v4 ATP-binding protein 0.9822 98 188 GO:0005524
GO:0005525
GO:0016787
AF-A0A6G3ADK0-F1-model_v4 ATP-binding protein 0.9795 96 198 GO:0005524
GO:0005525
GO:0016787
AF-A0A6B3EUW9-F1-model_v4 ATP-binding protein 0.979 107 200 GO:0005524
GO:0005525
GO:0016787
AF-A0A3D5DX43-F1-model_v4 ATP-binding protein 0.9767 93 199 GO:0005525
GO:0016787

Map