F321673

General Info

Members Datasets Scaffolds Average Seq Length
211 141 422 158

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10107492|Ga0207695_101074924
Length 179
Sequence VKSVDRAATPGGKPLTEPHMARSYNAAPQMTIDPNKKYTATFETSRGTIVCDLFPKEAPITVNNFVFLARDKFYDGTKFHRVIENFMVQGGDPEGTGRGGPGYRFEDETKNNPHKHRVGSLSMANAGPNTNGSQFFITHVVTDWLDGKHTVFGQVKSGQNVVNSVQQGDVLKSVTIQES

Samples

Sample ID Description Type Environment
1 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
69 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
106 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
110 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
111 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
112 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
121 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
130 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
131 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
135 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.9
Rhizosphere 89.1
Stem 0
Stem Tuber 0
Unclassified 4.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207695_10107492 3300025913 Bacteria 2775
2 Ga0065715_10691032 3300005293 Bacteria 654
3 Ga0070658_10152741 3300005327 Bacteria 1934
4 Ga0070658_11079415 3300005327 Bacteria 698
5 Ga0070670_101605189 3300005331 Bacteria 598
6 Ga0070666_10007832 3300005335 Bacteria 6597
7 Ga0070682_100673054 3300005337 Bacteria 826
8 Ga0070660_100457894 3300005339 Bacteria 1059
9 Ga0070668_100331324 3300005347 Bacteria 1284
10 Ga0070669_100994832 3300005353 Bacteria 719
11 Ga0070674_100076348 3300005356 Bacteria 2382
12 Ga0070674_100555222 3300005356 Bacteria 964
13 Ga0070659_100921207 3300005366 Unclassified 764
14 Ga0070667_100031317 3300005367 Bacteria 4436
15 Ga0070667_100449391 3300005367 Unclassified 1178
16 Ga0070667_100612557 3300005367 Bacteria 1004
17 Ga0070709_11374343 3300005434 Bacteria 571
18 Ga0070714_100199442 3300005435 Bacteria 1830
19 Ga0070714_101115356 3300005435 Bacteria 769
20 Ga0070713_100006973 3300005436 Bacteria 7889
21 Ga0070713_100081245 3300005436 Bacteria 2765
22 Ga0070713_101039329 3300005436 Bacteria 791
23 Ga0070710_11162663 3300005437 Bacteria 569
24 Ga0070711_100394693 3300005439 Bacteria 1122
25 Ga0070705_100126168 3300005440 Bacteria 1662
26 Ga0070708_100862260 3300005445 Bacteria 851
27 Ga0070663_100923231 3300005455 Bacteria 755
28 Ga0070662_100656937 3300005457 Bacteria 885
29 Ga0070681_10289572 3300005458 Bacteria 1548
30 Ga0068867_100319057 3300005459 Bacteria 1287
31 Ga0070706_101359969 3300005467 Bacteria 650
32 Ga0070707_100371947 3300005468 Bacteria 1388
33 Ga0070697_100224495 3300005536 Bacteria 1601
34 Ga0070695_100151347 3300005545 Bacteria 1620
35 Ga0070696_100822769 3300005546 Bacteria 766
36 Ga0070665_100006032 3300005548 Bacteria 12382
37 Ga0070665_100091626 3300005548 Bacteria 3044
38 Ga0070665_100147597 3300005548 Bacteria 2354
39 Ga0070665_100303639 3300005548 Unclassified 1599
40 Ga0068855_100078648 3300005563 Bacteria 3826
41 Ga0068857_100030981 3300005577 Bacteria 4726
42 Ga0068856_100399146 3300005614 Bacteria 1395
43 Ga0068856_101452089 3300005614 Unclassified 700
44 Ga0068852_100973117 3300005616 Bacteria 867
45 Ga0068852_102020242 3300005616 Bacteria 599
46 Ga0068859_100097971 3300005617 Bacteria 2986
47 Ga0068861_100734075 3300005719 Bacteria 921
48 Ga0068851_10203398 3300005834 Bacteria 1106
49 Ga0068860_100007539 3300005843 Bacteria 10884
50 Ga0068862_101197849 3300005844 Bacteria 758
51 Ga0081539_10024629 3300005985 Bacteria 3898
52 Ga0070717_10011815 3300006028 Bacteria 6642
53 Ga0070717_11546556 3300006028 Bacteria 602
54 Ga0070715_10332491 3300006163 Bacteria 824
55 Ga0070716_100994946 3300006173 Bacteria 663
56 Ga0070712_100414128 3300006175 Bacteria 1116
57 Ga0097621_100002719 3300006237 Bacteria 12105
58 Ga0068871_100061316 3300006358 Bacteria 3071
59 Ga0068865_100549475 3300006881 Bacteria 970
60 Ga0097620_100097964 3300006931 Bacteria 2986
61 Ga0105240_10189323 3300009093 Bacteria 2421
62 Ga0105240_10552440 3300009093 Bacteria 1274
63 Ga0105240_10656605 3300009093 Bacteria 1149
64 Ga0111539_11504082 3300009094 Bacteria 781
65 Ga0105245_10009106 3300009098 Bacteria 8654
66 Ga0105247_10146795 3300009101 Bacteria 1551
67 Ga0105247_10592949 3300009101 Bacteria 821
68 Ga0105241_10461908 3300009174 Bacteria 1125
69 Ga0105242_10018652 3300009176 Bacteria 5428
70 Ga0105248_10007461 3300009177 Bacteria 11999
71 Ga0105248_10045641 3300009177 Bacteria 4913
72 Ga0105248_10087135 3300009177 Bacteria 3514
73 Ga0105248_10673101 3300009177 Bacteria 1167
74 Ga0105238_10042605 3300009551 Bacteria 4596
75 Ga0105238_10246730 3300009551 Bacteria 1763
76 Ga0105238_11089016 3300009551 Bacteria 821
77 Ga0105249_10580402 3300009553 Bacteria 1174
78 Ga0105239_10009818 3300010375 Bacteria 10755
79 Ga0157370_10101792 3300013104 Bacteria 2690
80 Ga0157370_10681110 3300013104 Bacteria 939
81 Ga0157370_11139940 3300013104 Bacteria 704
82 Ga0157369_10276640 3300013105 Bacteria 1748
83 Ga0157369_10396337 3300013105 Bacteria 1432
84 Ga0157374_10869757 3300013296 Bacteria 918
85 Ga0157378_11028330 3300013297 Bacteria 859
86 Ga0163162_10519436 3300013306 Bacteria 1320
87 Ga0163162_10780666 3300013306 Bacteria 1073
88 Ga0157372_10327849 3300013307 Bacteria 1783
89 Ga0157372_10806137 3300013307 Bacteria 1091
90 Ga0157376_10050797 3300014969 Bacteria 3442
91 Ga0163161_10805118 3300017792 Unclassified 790
92 Ga0213872_10001502 3300021361 Bacteria 15026
93 Ga0213876_10040926 3300021384 Bacteria 2448
94 Ga0213876_10099624 3300021384 Bacteria 1540
95 Ga0213876_10699983 3300021384 Bacteria 539
96 Ga0213875_10017409 3300021388 Bacteria 3470
97 Ga0213875_10026073 3300021388 Bacteria 2783
98 Ga0213875_10085396 3300021388 Bacteria 1472
99 Ga0213875_10281743 3300021388 Bacteria 785
100 Ga0213871_10040792 3300021441 Bacteria 1245
101 Ga0207682_10026823 3300025893 Bacteria 2292
102 Ga0207692_10342089 3300025898 Bacteria 920
103 Ga0207642_10386592 3300025899 Unclassified 834
104 Ga0207710_10280374 3300025900 Bacteria 839
105 Ga0207680_10007450 3300025903 Bacteria 5336
106 Ga0207647_10498895 3300025904 Bacteria 679
107 Ga0207685_10165974 3300025905 Bacteria 1012
108 Ga0207699_10975109 3300025906 Bacteria 626
109 Ga0207705_10474602 3300025909 Bacteria 971
110 Ga0207654_10179253 3300025911 Bacteria 1381
111 Ga0207654_10237962 3300025911 Bacteria 1215
112 Ga0207695_10291252 3300025913 Unclassified 1525
113 Ga0207695_10638819 3300025913 Bacteria 945
114 Ga0207671_10065162 3300025914 Bacteria 2709
115 Ga0207693_10495247 3300025915 Bacteria 954
116 Ga0207663_10408243 3300025916 Bacteria 1040
117 Ga0207657_10595403 3300025919 Bacteria 863
118 Ga0207646_10194791 3300025922 Bacteria 1830
119 Ga0207646_11136113 3300025922 Bacteria 687
120 Ga0207681_11395931 3300025923 Bacteria 588
121 Ga0207694_10027359 3300025924 Bacteria 4343
122 Ga0207694_10434444 3300025924 Bacteria 1095
123 Ga0207694_10705475 3300025924 Bacteria 851
124 Ga0207687_10039667 3300025927 Bacteria 3225
125 Ga0207700_10024806 3300025928 Bacteria 4155
126 Ga0207700_10049473 3300025928 Bacteria 3127
127 Ga0207700_11539398 3300025928 Bacteria 589
128 Ga0207664_10027336 3300025929 Bacteria 4324
129 Ga0207664_10269945 3300025929 Bacteria 1490
130 Ga0207690_10238518 3300025932 Unclassified 1399
131 Ga0207706_10703002 3300025933 Bacteria 863
132 Ga0207686_10300384 3300025934 Bacteria 1192
133 Ga0207669_10584322 3300025937 Bacteria 906
134 Ga0207669_11635739 3300025937 Bacteria 550
135 Ga0207704_10266024 3300025938 Bacteria 1295
136 Ga0207711_10023829 3300025941 Bacteria 5124
137 Ga0207711_10338658 3300025941 Bacteria 1392
138 Ga0207667_10069161 3300025949 Bacteria 3675
139 Ga0207667_10133041 3300025949 Bacteria 2562
140 Ga0207667_10263366 3300025949 Bacteria 1763
141 Ga0207658_10453635 3300025986 Bacteria 1135
142 Ga0207703_10049068 3300026035 Bacteria 3411
143 Ga0207702_10184975 3300026078 Bacteria 1921
144 Ga0207674_10015076 3300026116 Bacteria 8508
145 Ga0207674_10739347 3300026116 Bacteria 949
146 Ga0207675_100694688 3300026118 Bacteria 1026
147 Ga0268266_10002312 3300028379 Bacteria 20668
148 Ga0268266_10208330 3300028379 Unclassified 1792
149 Ga0268266_10518710 3300028379 Bacteria 1139
150 Ga0268265_11195228 3300028380 Bacteria 758
151 Ga0268264_10021260 3300028381 Bacteria 5300
152 Ga0265339_10110506 3300031249 Bacteria 1422
153 Ga0265339_10379652 3300031249 Bacteria 663
154 Ga0265313_10003391 3300031595 Bacteria 12935
155 Ga0265314_10000666 3300031711 Bacteria 42060
156 Ga0265314_10003083 3300031711 Bacteria 16429
157 Ga0373923_0237554 3300035111 Bacteria 850
158 Ga0373956_0094593 3300035119 Bacteria 1381
159 Ga0373957_0011115 3300035120 Bacteria 2996
160 Ga0373943_0142361 3300035170 Bacteria 1293
161 Ga0373955_0042334 3300035172 Bacteria 2445
162 Ga0373935_0328113 3300035692 Bacteria 1087
163 Ga0373927_0032303 3300035695 Bacteria 3410
164 Ga0373933_0045866 3300035724 Bacteria 2593
165 Ga0373933_0673720 3300035724 Bacteria 680
166 Ga0373937_0001780 3300036401 Bacteria 18100
167 Ga0373937_0010830 3300036401 Bacteria 7980
168 Ga0373937_0146843 3300036401 Bacteria 2208
169 Ga0373937_0240953 3300036401 Bacteria 1704
170 Ga0436364_0438543 3300037853 Bacteria 629
171 Ga0436364_0623148 3300037853 Bacteria 15769
172 Ga0436364_0679077 3300037853 Bacteria 2336
173 Ga0436364_0735144 3300037853 Bacteria 6099
174 Ga0436364_0770585 3300037853 Bacteria 2827
175 Ga0436364_1015160 3300037853 Bacteria 2036
176 Ga0436364_1552384 3300037853 Bacteria 5289
177 Ga0395901_0279864 3300038443 Bacteria 1733
178 Ga0436365_0615466 3300039437 Bacteria 11462
179 Ga0436365_0956911 3300039437 Bacteria 6984
180 Ga0436365_1067054 3300039437 Bacteria 4915
181 Ga0436365_1636663 3300039437 Bacteria 684
182 Ga0436360_0547836 3300039438 Bacteria 2880
183 Ga0436361_0761235 3300039447 Bacteria 90297
184 Ga0436363_1601667 3300039450 Bacteria 2062
185 Ga0436362_0783166 3300039453 Bacteria 1721
186 Ga0436362_0811968 3300039453 Bacteria 1780
187 Ga0436362_1301770 3300039453 Bacteria 2271
188 Ga0451577_0456675 3300042876 Bacteria 1160
189 Ga0453684_0631116 3300044712 Bacteria 1171
190 Ga0453684_1299718 3300044712 Bacteria 759
191 Ga0466959_0812649 3300045049 Bacteria 625
192 Ga0451576_0000141 3300045051 Bacteria 183004
193 Ga0451576_1099743 3300045051 Bacteria 832
194 Ga0466967_0534270 3300045976 Bacteria 1153
195 Ga0495653_0361716 3300046463 Bacteria 931
196 Ga0495664_0148696 3300046477 Bacteria 1421
197 Ga0495666_0241971 3300046526 Bacteria 823
198 Ga0495586_0159520 3300046535 Bacteria 1272
199 Ga0495586_0433732 3300046535 Bacteria 757
200 Ga0495645_0172549 3300046543 Bacteria 1488
201 Ga0495645_0308929 3300046543 Bacteria 1030
202 Ga0495667_0019776 3300046559 Bacteria 4544
203 Ga0495599_0451897 3300046678 Bacteria 761
204 Ga0495613_0071735 3300046689 Bacteria 2524
205 Ga0495675_0210112 3300047444 Bacteria 1182
206 Ga0495684_0069766 3300047471 Bacteria 2672
207 Ga0496104_0233020 3300048907 Bacteria 1753
208 Ga0496104_0344239 3300048907 Bacteria 1404
209 Ga0496104_0419705 3300048907 Bacteria 1250
210 Ga0496115_0869600 3300048918 Bacteria 697
211 nmdc:mga08x19_607431_c1 3300050514 Bacteria 775
212 Ga0207695_10107492
213 Ga0065715_10691032
214 Ga0070658_10152741
215 Ga0070658_11079415
216 Ga0070670_101605189
217 Ga0070666_10007832
218 Ga0070682_100673054
219 Ga0070660_100457894
220 Ga0070668_100331324
221 Ga0070669_100994832
222 Ga0070674_100076348
223 Ga0070674_100555222
224 Ga0070659_100921207
225 Ga0070667_100031317
226 Ga0070667_100449391
227 Ga0070667_100612557
228 Ga0070709_11374343
229 Ga0070714_100199442
230 Ga0070714_101115356
231 Ga0070713_100006973
232 Ga0070713_100081245
233 Ga0070713_101039329
234 Ga0070710_11162663
235 Ga0070711_100394693
236 Ga0070705_100126168
237 Ga0070708_100862260
238 Ga0070663_100923231
239 Ga0070662_100656937
240 Ga0070681_10289572
241 Ga0068867_100319057
242 Ga0070706_101359969
243 Ga0070707_100371947
244 Ga0070697_100224495
245 Ga0070695_100151347
246 Ga0070696_100822769
247 Ga0070665_100006032
248 Ga0070665_100091626
249 Ga0070665_100147597
250 Ga0070665_100303639
251 Ga0068855_100078648
252 Ga0068857_100030981
253 Ga0068856_100399146
254 Ga0068856_101452089
255 Ga0068852_100973117
256 Ga0068852_102020242
257 Ga0068859_100097971
258 Ga0068861_100734075
259 Ga0068851_10203398
260 Ga0068860_100007539
261 Ga0068862_101197849
262 Ga0081539_10024629
263 Ga0070717_10011815
264 Ga0070717_11546556
265 Ga0070715_10332491
266 Ga0070716_100994946
267 Ga0070712_100414128
268 Ga0097621_100002719
269 Ga0068871_100061316
270 Ga0068865_100549475
271 Ga0097620_100097964
272 Ga0105240_10189323
273 Ga0105240_10552440
274 Ga0105240_10656605
275 Ga0111539_11504082
276 Ga0105245_10009106
277 Ga0105247_10146795
278 Ga0105247_10592949
279 Ga0105241_10461908
280 Ga0105242_10018652
281 Ga0105248_10007461
282 Ga0105248_10045641
283 Ga0105248_10087135
284 Ga0105248_10673101
285 Ga0105238_10042605
286 Ga0105238_10246730
287 Ga0105238_11089016
288 Ga0105249_10580402
289 Ga0105239_10009818
290 Ga0157370_10101792
291 Ga0157370_10681110
292 Ga0157370_11139940
293 Ga0157369_10276640
294 Ga0157369_10396337
295 Ga0157374_10869757
296 Ga0157378_11028330
297 Ga0163162_10519436
298 Ga0163162_10780666
299 Ga0157372_10327849
300 Ga0157372_10806137
301 Ga0157376_10050797
302 Ga0163161_10805118
303 Ga0213872_10001502
304 Ga0213876_10040926
305 Ga0213876_10099624
306 Ga0213876_10699983
307 Ga0213875_10017409
308 Ga0213875_10026073
309 Ga0213875_10085396
310 Ga0213875_10281743
311 Ga0213871_10040792
312 Ga0207682_10026823
313 Ga0207692_10342089
314 Ga0207642_10386592
315 Ga0207710_10280374
316 Ga0207680_10007450
317 Ga0207647_10498895
318 Ga0207685_10165974
319 Ga0207699_10975109
320 Ga0207705_10474602
321 Ga0207654_10179253
322 Ga0207654_10237962
323 Ga0207695_10291252
324 Ga0207695_10638819
325 Ga0207671_10065162
326 Ga0207693_10495247
327 Ga0207663_10408243
328 Ga0207657_10595403
329 Ga0207646_10194791
330 Ga0207646_11136113
331 Ga0207681_11395931
332 Ga0207694_10027359
333 Ga0207694_10434444
334 Ga0207694_10705475
335 Ga0207687_10039667
336 Ga0207700_10024806
337 Ga0207700_10049473
338 Ga0207700_11539398
339 Ga0207664_10027336
340 Ga0207664_10269945
341 Ga0207690_10238518
342 Ga0207706_10703002
343 Ga0207686_10300384
344 Ga0207669_10584322
345 Ga0207669_11635739
346 Ga0207704_10266024
347 Ga0207711_10023829
348 Ga0207711_10338658
349 Ga0207667_10069161
350 Ga0207667_10133041
351 Ga0207667_10263366
352 Ga0207658_10453635
353 Ga0207703_10049068
354 Ga0207702_10184975
355 Ga0207674_10015076
356 Ga0207674_10739347
357 Ga0207675_100694688
358 Ga0268266_10002312
359 Ga0268266_10208330
360 Ga0268266_10518710
361 Ga0268265_11195228
362 Ga0268264_10021260
363 Ga0265339_10110506
364 Ga0265339_10379652
365 Ga0265313_10003391
366 Ga0265314_10000666
367 Ga0265314_10003083
368 Ga0373923_0237554
369 Ga0373956_0094593
370 Ga0373957_0011115
371 Ga0373943_0142361
372 Ga0373955_0042334
373 Ga0373935_0328113
374 Ga0373927_0032303
375 Ga0373933_0045866
376 Ga0373933_0673720
377 Ga0373937_0001780
378 Ga0373937_0010830
379 Ga0373937_0146843
380 Ga0373937_0240953
381 Ga0436364_0438543
382 Ga0436364_0623148
383 Ga0436364_0679077
384 Ga0436364_0735144
385 Ga0436364_0770585
386 Ga0436364_1015160
387 Ga0436364_1552384
388 Ga0395901_0279864
389 Ga0436365_0615466
390 Ga0436365_0956911
391 Ga0436365_1067054
392 Ga0436365_1636663
393 Ga0436360_0547836
394 Ga0436361_0761235
395 Ga0436363_1601667
396 Ga0436362_0783166
397 Ga0436362_0811968
398 Ga0436362_1301770
399 Ga0451577_0456675
400 Ga0453684_0631116
401 Ga0453684_1299718
402 Ga0466959_0812649
403 Ga0451576_0000141
404 Ga0451576_1099743
405 Ga0466967_0534270
406 Ga0495653_0361716
407 Ga0495664_0148696
408 Ga0495666_0241971
409 Ga0495586_0159520
410 Ga0495586_0433732
411 Ga0495645_0172549
412 Ga0495645_0308929
413 Ga0495667_0019776
414 Ga0495599_0451897
415 Ga0495613_0071735
416 Ga0495675_0210112
417 Ga0495684_0069766
418 Ga0496104_0233020
419 Ga0496104_0344239
420 Ga0496104_0419705
421 Ga0496115_0869600
422 nmdc:mga08x19_607431_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00160

Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

39

179

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7a5p-assembly1.cif.gz_z human c complex spliceosome - medium-resolution periphery 0.9106 20 158
2fu0-assembly1.cif.gz_A plasmodium falciparum cyclophilin pfe0505w putative cyclosporin-binding domain 0.9059 20 158
7dvq-assembly1.cif.gz_9 cryo-em structure of the activated human minor spliceosome (minor bact complex) 0.8983 15 157
3jb9-assembly1.cif.gz_d cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution 0.8979 19 158
1w74-assembly2.cif.gz_B x-ray structure of peptidyl-prolyl cis-trans isomerase a, ppia, rv0009, from mycobacterium tuberculosis. 0.8963 19 158
ID Description Score Start End Superfamily
1w74B00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8963 19 158 2.40.100.10
1xyhA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8942 20 158 2.40.100.10
2mvzA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8928 18 160 2.40.100.10
2mvzA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8701 18 160 2.40.100.10
af_A0A0R4J2Z8_2_164_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8694 12 158 2.40.100.10
ID Description Score Start End GO Terms
AF-D5H624-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9625 2 160 GO:0006457
GO:0140839
GO:0140840
AF-A0A6N2DWQ2-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9593 11 160 GO:0140839
GO:0140840
AF-A0A357N7K6-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9543 19 158 GO:0006457
GO:0140839
GO:0140840
AF-A0A6N2DWQ2-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9531 11 160 GO:0140839
GO:0140840
AF-A0A7V1W0H3-F1-model_v4 peptidylprolyl isomerase (EC 5.2.1.8) 0.9524 2 160 GO:0003755

Map