F321241
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 211 | 150 | 202 | 224 |
Family's Representative Sequence
| Representative Sequence | 3300005339|Ga0070660_100284399|Ga0070660_1002843992 |
| Length | 250 |
| Sequence | LNSASRSSERAAFGGAPCHRDMALSKRRNKMARDRSPKDNLVIAVDGPAASGKGTIARALADHFDLPHMDTGLLYRAVALNLWRWGGDPSSEFEALRASGELNLDPSDPELRSEPVSRIASSISAYPSVRAALLERQRRFADQPGGAVLDGRDIGTVIAPDAAVKLFVTASPEIRAQRRVRELLGRGMPAHYDDVLADIRARDERDSGRTVAPLRQASDAILLDTSERTVDEAVAEAIRLVERRLERPSR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237087 | Azorhizobium doebereinerae UFLA1-100 | Isolate | Nodule |
| 2 | 2534681786 | Brucella suis 92/29 | Isolate | Unclassified |
| 3 | 2751185800 | Brucella pituitosa AA2 | Isolate | Unclassified |
| 4 | 2758568016 | [Ochrobactrum] quorumnocens A44 | Isolate | Rhizosphere |
| 5 | 2854911287 | Brucella lupini LUP21 | Isolate | Unclassified |
| 6 | 2899803654 | Agrobacterium sp. a22-2 | Isolate | Unclassified |
| 7 | 2915650412 | Ochrobactrum sp. CM-21-5 | Isolate | Rhizosphere |
| 8 | 2920760137 | Ensifer psoraleae CCBAU 65732 | Isolate | Unclassified |
| 9 | 2996893221 | Rhizobium sp. R635 | Isolate | Nodule |
| 10 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 11 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 12 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 14 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 33 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 34 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 35 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 36 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 37 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 38 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 39 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 40 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 41 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 42 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 43 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 44 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 45 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 46 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 48 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 65 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 68 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 92 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 95 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 96 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 97 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 98 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 99 | 3300035090 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 | Metagenome | Rhizosphere |
| 100 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 101 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 102 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 103 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 104 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 105 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 106 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 107 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 108 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 109 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 110 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 111 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 112 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 113 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 114 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 115 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 116 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 117 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 118 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 119 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 120 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 126 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 127 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 128 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 129 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 131 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 132 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 133 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 134 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 135 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 136 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 137 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 138 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 139 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 143 | 3300049778 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control | Metagenome | Rhizosphere |
| 144 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 149 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 150 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.73 |
| Metatranscriptomes | 0 |
| Isolates | 4.27 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.9 |
| Nodule | 0.95 |
| Rhizoplane | 4.74 |
| Rhizosphere | 82.94 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.48 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24737J22298_10002828 | 3300001990 | Bacteria | 6149 |
| 2 | rootH1_10068564 | 3300003323 | Bacteria | 2928 |
| 3 | rootH1_10107864 | 3300003323 | Bacteria | 1122 |
| 4 | Ga0070670_100352909 | 3300005331 | Bacteria | 1292 |
| 5 | Ga0068869_100043950 | 3300005334 | Bacteria | 3211 |
| 6 | Ga0068869_100133794 | 3300005334 | Bacteria | 1908 |
| 7 | Ga0070682_100031669 | 3300005337 | Bacteria | 3200 |
| 8 | Ga0070660_100038527 | 3300005339 | Bacteria | 3629 |
| 9 | Ga0070660_100284399 | 3300005339 | Bacteria | 1354 |
| 10 | Ga0070661_100027450 | 3300005344 | Bacteria | 4099 |
| 11 | Ga0070661_100039266 | 3300005344 | Bacteria | 3450 |
| 12 | Ga0070692_10001122 | 3300005345 | Bacteria | 9369 |
| 13 | Ga0070668_100151390 | 3300005347 | Bacteria | 1876 |
| 14 | Ga0070668_100517643 | 3300005347 | Bacteria | 1035 |
| 15 | Ga0070669_100146550 | 3300005353 | Bacteria | 1825 |
| 16 | Ga0070669_100151329 | 3300005353 | Bacteria | 1796 |
| 17 | Ga0070675_100071584 | 3300005354 | Bacteria | 2877 |
| 18 | Ga0070675_100107529 | 3300005354 | Bacteria | 2356 |
| 19 | Ga0070671_100118664 | 3300005355 | Bacteria | 2225 |
| 20 | Ga0070659_100025024 | 3300005366 | Bacteria | 4581 |
| 21 | Ga0070667_100016238 | 3300005367 | Bacteria | 6160 |
| 22 | Ga0070694_100576605 | 3300005444 | Bacteria | 903 |
| 23 | Ga0070663_100160223 | 3300005455 | Bacteria | 1731 |
| 24 | Ga0070662_100004724 | 3300005457 | Bacteria | 8632 |
| 25 | Ga0070662_100129092 | 3300005457 | Bacteria | 1947 |
| 26 | Ga0070672_100052135 | 3300005543 | Bacteria | 3193 |
| 27 | Ga0070695_100186179 | 3300005545 | Bacteria | 1474 |
| 28 | Ga0070696_100040424 | 3300005546 | Bacteria | 3220 |
| 29 | Ga0070693_100040122 | 3300005547 | Bacteria | 2627 |
| 30 | Ga0070664_100011627 | 3300005564 | Bacteria | 7142 |
| 31 | Ga0070664_100021107 | 3300005564 | Bacteria | 5365 |
| 32 | Ga0068857_100022147 | 3300005577 | Bacteria | 5590 |
| 33 | Ga0068857_100028433 | 3300005577 | Bacteria | 4934 |
| 34 | Ga0068856_100213712 | 3300005614 | Bacteria | 1944 |
| 35 | Ga0068852_100200616 | 3300005616 | Bacteria | 1888 |
| 36 | Ga0068852_100402438 | 3300005616 | Bacteria | 1347 |
| 37 | Ga0068859_100010791 | 3300005617 | Bacteria | 9198 |
| 38 | Ga0068859_100064267 | 3300005617 | Bacteria | 3702 |
| 39 | Ga0068859_100127235 | 3300005617 | Bacteria | 2618 |
| 40 | Ga0068864_100002316 | 3300005618 | Bacteria | 15756 |
| 41 | Ga0068864_100133281 | 3300005618 | Bacteria | 2234 |
| 42 | Ga0068864_100529924 | 3300005618 | Bacteria | 1136 |
| 43 | Ga0068863_100009046 | 3300005841 | Bacteria | 9724 |
| 44 | Ga0068863_100020609 | 3300005841 | Bacteria | 6301 |
| 45 | Ga0068863_100064065 | 3300005841 | Bacteria | 3476 |
| 46 | Ga0068858_100009330 | 3300005842 | Bacteria | 9369 |
| 47 | Ga0068858_100036280 | 3300005842 | Bacteria | 4571 |
| 48 | Ga0068858_100039538 | 3300005842 | Bacteria | 4373 |
| 49 | Ga0068860_100004317 | 3300005843 | Bacteria | 14539 |
| 50 | Ga0068860_100170691 | 3300005843 | Bacteria | 2101 |
| 51 | Ga0068860_100181443 | 3300005843 | Bacteria | 2034 |
| 52 | Ga0068862_100015152 | 3300005844 | Bacteria | 6403 |
| 53 | Ga0081455_10000068 | 3300005937 | Bacteria | 112215 |
| 54 | Ga0075368_10091321 | 3300006042 | Bacteria | 1245 |
| 55 | Ga0068871_100665177 | 3300006358 | Bacteria | 952 |
| 56 | Ga0075433_10010232 | 3300006852 | Bacteria | 7522 |
| 57 | Ga0075434_100057063 | 3300006871 | Bacteria | 3880 |
| 58 | Ga0075434_100141015 | 3300006871 | Bacteria | 2430 |
| 59 | Ga0097620_100010791 | 3300006931 | Bacteria | 9198 |
| 60 | Ga0097620_100064267 | 3300006931 | Bacteria | 3702 |
| 61 | Ga0097620_100127234 | 3300006931 | Bacteria | 2618 |
| 62 | Ga0075435_100078842 | 3300007076 | Bacteria | 2702 |
| 63 | Ga0105251_10209456 | 3300009011 | Bacteria | 878 |
| 64 | Ga0105240_10080534 | 3300009093 | Bacteria | 4005 |
| 65 | Ga0111539_10017093 | 3300009094 | Bacteria | 8978 |
| 66 | Ga0105243_10168580 | 3300009148 | Bacteria | 1894 |
| 67 | Ga0105243_10201146 | 3300009148 | Bacteria | 1747 |
| 68 | Ga0105241_10078943 | 3300009174 | Bacteria | 2573 |
| 69 | Ga0105248_10399545 | 3300009177 | Bacteria | 1548 |
| 70 | Ga0105237_10283656 | 3300009545 | Bacteria | 1659 |
| 71 | Ga0105239_10202330 | 3300010375 | Bacteria | 2225 |
| 72 | Ga0105239_10981862 | 3300010375 | Bacteria | 971 |
| 73 | Ga0105246_10030478 | 3300011119 | Bacteria | 3563 |
| 74 | Ga0105246_10898316 | 3300011119 | Bacteria | 794 |
| 75 | Ga0157373_10039733 | 3300013100 | Bacteria | 3367 |
| 76 | Ga0157371_10045281 | 3300013102 | Bacteria | 3131 |
| 77 | Ga0157369_11055780 | 3300013105 | Bacteria | 831 |
| 78 | Ga0157374_10438170 | 3300013296 | Bacteria | 1307 |
| 79 | Ga0163162_10252618 | 3300013306 | Bacteria | 1895 |
| 80 | Ga0163162_10338654 | 3300013306 | Bacteria | 1637 |
| 81 | Ga0163163_10015544 | 3300014325 | Bacteria | 7038 |
| 82 | Ga0163163_10183718 | 3300014325 | Bacteria | 2138 |
| 83 | Ga0157380_10364477 | 3300014326 | Bacteria | 1357 |
| 84 | Ga0182008_10024282 | 3300014497 | Bacteria | 3087 |
| 85 | Ga0157377_10169805 | 3300014745 | Bacteria | 1363 |
| 86 | Ga0157379_10003214 | 3300014968 | Bacteria | 13847 |
| 87 | Ga0213875_10000152 | 3300021388 | Bacteria | 73219 |
| 88 | Ga0213875_10075209 | 3300021388 | Bacteria | 1576 |
| 89 | Ga0209051_1021353 | 3300025303 | Bacteria | 2760 |
| 90 | Ga0207685_10042838 | 3300025905 | Bacteria | 1702 |
| 91 | Ga0207707_10334270 | 3300025912 | Bacteria | 1307 |
| 92 | Ga0207649_10053206 | 3300025920 | Bacteria | 2515 |
| 93 | Ga0207649_10098320 | 3300025920 | Bacteria | 1931 |
| 94 | Ga0207681_10311054 | 3300025923 | Bacteria | 1249 |
| 95 | Ga0207650_10073210 | 3300025925 | Bacteria | 2580 |
| 96 | Ga0207659_10096025 | 3300025926 | Bacteria | 2224 |
| 97 | Ga0207644_10022843 | 3300025931 | Bacteria | 4276 |
| 98 | Ga0207690_10097733 | 3300025932 | Bacteria | 2090 |
| 99 | Ga0207690_10137931 | 3300025932 | Bacteria | 1793 |
| 100 | Ga0207706_10028407 | 3300025933 | Bacteria | 4996 |
| 101 | Ga0207706_10085150 | 3300025933 | Bacteria | 2779 |
| 102 | Ga0207706_10444619 | 3300025933 | Bacteria | 1122 |
| 103 | Ga0207691_10012897 | 3300025940 | Bacteria | 8003 |
| 104 | Ga0207711_10384993 | 3300025941 | Bacteria | 1302 |
| 105 | Ga0207711_10458935 | 3300025941 | Bacteria | 1186 |
| 106 | Ga0207689_10012184 | 3300025942 | Bacteria | 7357 |
| 107 | Ga0207689_10095092 | 3300025942 | Bacteria | 2447 |
| 108 | Ga0207679_10007464 | 3300025945 | Bacteria | 6938 |
| 109 | Ga0207667_10150690 | 3300025949 | Bacteria | 2394 |
| 110 | Ga0207658_10316414 | 3300025986 | Bacteria | 1350 |
| 111 | Ga0207677_10069654 | 3300026023 | Bacteria | 2474 |
| 112 | Ga0207703_10004611 | 3300026035 | Bacteria | 11279 |
| 113 | Ga0207703_10013952 | 3300026035 | Bacteria | 6263 |
| 114 | Ga0207703_10520408 | 3300026035 | Bacteria | 1119 |
| 115 | Ga0207702_10993819 | 3300026078 | Bacteria | 832 |
| 116 | Ga0207641_10043057 | 3300026088 | Bacteria | 3790 |
| 117 | Ga0207641_10073982 | 3300026088 | Bacteria | 2937 |
| 118 | Ga0207641_10082549 | 3300026088 | Bacteria | 2792 |
| 119 | Ga0207676_10006016 | 3300026095 | Bacteria | 8556 |
| 120 | Ga0207674_10000641 | 3300026116 | Bacteria | 45504 |
| 121 | Ga0207674_10000730 | 3300026116 | Bacteria | 42917 |
| 122 | Ga0207675_100286599 | 3300026118 | Bacteria | 1601 |
| 123 | Ga0207428_10100763 | 3300027907 | Bacteria | 2232 |
| 124 | Ga0268265_10021714 | 3300028380 | Bacteria | 4500 |
| 125 | Ga0268265_10139824 | 3300028380 | Bacteria | 2025 |
| 126 | Ga0268264_10012013 | 3300028381 | Bacteria | 7131 |
| 127 | Ga0268264_10295647 | 3300028381 | Bacteria | 1522 |
| 128 | Ga0307406_10078433 | 3300031901 | Bacteria | 2188 |
| 129 | Ga0307409_100081274 | 3300031995 | Bacteria | 2619 |
| 130 | Ga0307409_100507767 | 3300031995 | Bacteria | 1175 |
| 131 | Ga0307411_10196170 | 3300032005 | Bacteria | 1546 |
| 132 | Ga0307415_100355509 | 3300032126 | Bacteria | 1235 |
| 133 | Ga0307415_100377979 | 3300032126 | Bacteria | 1202 |
| 134 | Ga0373940_0027666 | 3300035088 | Bacteria | 1491 |
| 135 | Ga0373949_0006667 | 3300035090 | Bacteria | 2536 |
| 136 | Ga0373951_0060681 | 3300035091 | Bacteria | 946 |
| 137 | Ga0373961_0005493 | 3300035241 | Bacteria | 3046 |
| 138 | Ga0373962_0008383 | 3300035242 | Bacteria | 2542 |
| 139 | Ga0373931_0002869 | 3300035691 | Bacteria | 7687 |
| 140 | Ga0395899_0199808 | 3300037312 | Bacteria | 1395 |
| 141 | Ga0395900_0048207 | 3300037418 | Bacteria | 4388 |
| 142 | Ga0395898_0347233 | 3300037466 | Bacteria | 1415 |
| 143 | Ga0395905_0000450 | 3300037471 | Bacteria | 57601 |
| 144 | Ga0395905_0024961 | 3300037471 | Bacteria | 5639 |
| 145 | Ga0395905_0057508 | 3300037471 | Bacteria | 3638 |
| 146 | Ga0395905_0103854 | 3300037471 | Bacteria | 2668 |
| 147 | Ga0395905_0124117 | 3300037471 | Bacteria | 2428 |
| 148 | Ga0395905_0730332 | 3300037471 | Bacteria | 893 |
| 149 | Ga0395905_0874406 | 3300037471 | Bacteria | 802 |
| 150 | Ga0436364_0154218 | 3300037853 | Bacteria | 60339 |
| 151 | Ga0436364_0549560 | 3300037853 | Bacteria | 1776 |
| 152 | Ga0436364_1286128 | 3300037853 | Bacteria | 3860 |
| 153 | Ga0395901_0182069 | 3300038443 | Bacteria | 2204 |
| 154 | Ga0395901_0400909 | 3300038443 | Bacteria | 1409 |
| 155 | Ga0466969_0006562 | 3300044656 | Bacteria | 6187 |
| 156 | Ga0466966_0000665 | 3300044684 | Bacteria | 21873 |
| 157 | Ga0466961_0004741 | 3300044693 | Bacteria | 8558 |
| 158 | Ga0466963_0011635 | 3300044694 | Bacteria | 5359 |
| 159 | Ga0466971_0000926 | 3300044719 | Bacteria | 12050 |
| 160 | Ga0466970_0001372 | 3300044765 | Bacteria | 11737 |
| 161 | Ga0466957_0017464 | 3300044842 | Bacteria | 4203 |
| 162 | Ga0466960_0105712 | 3300044901 | Bacteria | 1455 |
| 163 | Ga0466959_0000205 | 3300045049 | Bacteria | 38298 |
| 164 | Ga0466958_0007784 | 3300045836 | Bacteria | 5913 |
| 165 | Ga0495606_0011983 | 3300046507 | Bacteria | 7003 |
| 166 | Ga0495606_0083406 | 3300046507 | Bacteria | 1982 |
| 167 | Ga0495668_0286164 | 3300046616 | Bacteria | 903 |
| 168 | Ga0495625_0527904 | 3300046660 | Bacteria | 718 |
| 169 | Ga0495669_0005499 | 3300046684 | Bacteria | 5288 |
| 170 | Ga0495686_0244994 | 3300047472 | Bacteria | 1009 |
| 171 | Ga0496102_0104676 | 3300048905 | Bacteria | 2632 |
| 172 | Ga0496103_0086039 | 3300048906 | Bacteria | 1981 |
| 173 | Ga0496107_0597325 | 3300048910 | Bacteria | 816 |
| 174 | Ga0496108_0031015 | 3300048911 | Bacteria | 4432 |
| 175 | Ga0496109_0003365 | 3300048912 | Bacteria | 13375 |
| 176 | Ga0496109_0294185 | 3300048912 | Bacteria | 1531 |
| 177 | Ga0496111_0085272 | 3300048914 | Bacteria | 2309 |
| 178 | Ga0496112_0067367 | 3300048915 | Bacteria | 3534 |
| 179 | Ga0496112_0354867 | 3300048915 | Bacteria | 1408 |
| 180 | Ga0496113_0048126 | 3300048916 | Bacteria | 3171 |
| 181 | Ga0496119_0008938 | 3300048922 | Bacteria | 8700 |
| 182 | Ga0496120_0065882 | 3300048923 | Bacteria | 2005 |
| 183 | Ga0496121_0003170 | 3300048924 | Bacteria | 23717 |
| 184 | Ga0496121_0163740 | 3300048924 | Bacteria | 1623 |
| 185 | Ga0496122_0044664 | 3300048925 | Bacteria | 3454 |
| 186 | Ga0496123_0060536 | 3300048926 | Bacteria | 2440 |
| 187 | Ga0496126_0055342 | 3300048929 | Bacteria | 3590 |
| 188 | Ga0496126_0093366 | 3300048929 | Bacteria | 2642 |
| 189 | Ga0501033_0005158 | 3300049570 | Bacteria | 10384 |
| 190 | Ga0501033_0263130 | 3300049570 | Bacteria | 1220 |
| 191 | Ga0501034_0236625 | 3300049571 | Bacteria | 1773 |
| 192 | Ga0501043_0033202 | 3300049579 | Bacteria | 4059 |
| 193 | Ga0501067_0096383 | 3300049583 | Bacteria | 1642 |
| 194 | Ga0501282_005413 | 3300049778 | Bacteria | 1364 |
| 195 | Ga0501035_0001059 | 3300049822 | Bacteria | 28829 |
| 196 | Ga0501035_0053989 | 3300049822 | Bacteria | 3591 |
| 197 | nmdc:mga08y16_197927_c1 | 3300050511 | Bacteria | 2083 |
| 198 | nmdc:mga0n895_4211_c1 | 3300050512 | Bacteria | 11758 |
| 199 | nmdc:mga0a205_128347_c1 | 3300050515 | Bacteria | 2436 |
| 200 | Ga0500559_0215033 | 3300053136 | Bacteria | 907 |
| 201 | Ga0500634_0009595 | 3300053161 | Bacteria | 4910 |
| 202 | Ga0466962_0000112 | 3300061719 | Bacteria | 32968 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049822 | Ga0501035_0053989 | Ga0501035_0053989_3039_3560 | 172 |
| 2 | 3300049570 | Ga0501033_0263130 | Ga0501033_0263130_493_1131 | 192 |
| 3 | 3300006042 | Ga0075368_10091321 | Ga0075368_100913211 | 197 |
| 4 | 3300021388 | Ga0213875_10075209 | Ga0213875_100752092 | 197 |
| 5 | 3300037853 | Ga0436364_1286128 | Ga0436364_1286128_2899_3558 | 197 |
| 6 | iso_pu_bacteria | 2513237087 | 2513592976 | 203 |
| 7 | iso_pu_bacteria | 2899803654 | 2899808327 | 204 |
| 8 | iso_pu_bacteria | 2920760137 | 2920763864 | 205 |
| 9 | 3300049570 | Ga0501033_0005158 | Ga0501033_0005158_5972_6595 | 206 |
| 10 | 3300049583 | Ga0501067_0096383 | Ga0501067_0096383_658_1278 | 206 |
| 11 | 3300049822 | Ga0501035_0001059 | Ga0501035_0001059_8523_9146 | 206 |
| 12 | 3300037853 | Ga0436364_0549560 | Ga0436364_0549560_190_822 | 207 |
| 13 | 3300046660 | Ga0495625_0527904 | Ga0495625_0527904_35_661 | 207 |
| 14 | 3300049778 | Ga0501282_005413 | Ga0501282_005413_585_1211 | 207 |
| 15 | 3300053136 | Ga0500559_0215033 | Ga0500559_0215033_239_865 | 207 |
| 16 | iso_pu_bacteria | 2751185800 | 2753358371 | 207 |
| 17 | iso_pu_bacteria | 2758568016 | 2758640595 | 207 |
| 18 | iso_pu_bacteria | 2854911287 | 2854913879 | 207 |
| 19 | iso_pu_bacteria | 2915650412 | 2915650753 | 207 |
| 20 | 3300005937 | Ga0081455_10000068 | Ga0081455_1000006833 | 208 |
| 21 | 3300006852 | Ga0075433_10010232 | Ga0075433_100102324 | 208 |
| 22 | 3300006871 | Ga0075434_100057063 | Ga0075434_1000570632 | 208 |
| 23 | 3300007076 | Ga0075435_100078842 | Ga0075435_1000788422 | 208 |
| 24 | 3300009094 | Ga0111539_10017093 | Ga0111539_100170934 | 208 |
| 25 | 3300011119 | Ga0105246_10898316 | Ga0105246_108983162 | 208 |
| 26 | 3300013306 | Ga0163162_10338654 | Ga0163162_103386542 | 208 |
| 27 | 3300014325 | Ga0163163_10183718 | Ga0163163_101837181 | 208 |
| 28 | 3300025905 | Ga0207685_10042838 | Ga0207685_100428382 | 208 |
| 29 | 3300026035 | Ga0207703_10520408 | Ga0207703_105204082 | 208 |
| 30 | 3300027907 | Ga0207428_10100763 | Ga0207428_101007632 | 208 |
| 31 | 3300032005 | Ga0307411_10196170 | Ga0307411_101961702 | 208 |
| 32 | 3300035088 | Ga0373940_0027666 | Ga0373940_0027666_576_1214 | 208 |
| 33 | 3300035090 | Ga0373949_0006667 | Ga0373949_0006667_294_932 | 208 |
| 34 | 3300035091 | Ga0373951_0060681 | Ga0373951_0060681_207_845 | 208 |
| 35 | 3300035241 | Ga0373961_0005493 | Ga0373961_0005493_671_1309 | 208 |
| 36 | 3300035242 | Ga0373962_0008383 | Ga0373962_0008383_26_664 | 208 |
| 37 | 3300035691 | Ga0373931_0002869 | Ga0373931_0002869_3761_4399 | 208 |
| 38 | 3300046507 | Ga0495606_0011983 | Ga0495606_0011983_4571_5203 | 208 |
| 39 | 3300046507 | Ga0495606_0083406 | Ga0495606_0083406_212_844 | 208 |
| 40 | 3300047472 | Ga0495686_0244994 | Ga0495686_0244994_230_862 | 208 |
| 41 | 3300048924 | Ga0496121_0163740 | Ga0496121_0163740_888_1520 | 208 |
| 42 | 3300050511 | nmdc:mga08y16_197927_c1 | nmdc:mga08y16_197927_c1_1015_1653 | 208 |
| 43 | 3300050512 | nmdc:mga0n895_4211_c1 | nmdc:mga0n895_4211_c1_67_705 | 208 |
| 44 | 3300050515 | nmdc:mga0a205_128347_c1 | nmdc:mga0a205_128347_c1_374_1012 | 208 |
| 45 | 3300003323 | rootH1_10068564 | rootH1_100685643 | 209 |
| 46 | 3300005614 | Ga0068856_100213712 | Ga0068856_1002137122 | 209 |
| 47 | 3300009174 | Ga0105241_10078943 | Ga0105241_100789432 | 209 |
| 48 | 3300026078 | Ga0207702_10993819 | Ga0207702_109938191 | 209 |
| 49 | 3300044656 | Ga0466969_0006562 | Ga0466969_0006562_5281_5916 | 209 |
| 50 | 3300044684 | Ga0466966_0000665 | Ga0466966_0000665_17847_18482 | 209 |
| 51 | 3300044693 | Ga0466961_0004741 | Ga0466961_0004741_5253_5888 | 209 |
| 52 | 3300044694 | Ga0466963_0011635 | Ga0466963_0011635_692_1327 | 209 |
| 53 | 3300044719 | Ga0466971_0000926 | Ga0466971_0000926_5461_6096 | 209 |
| 54 | 3300044765 | Ga0466970_0001372 | Ga0466970_0001372_2322_2957 | 209 |
| 55 | 3300044842 | Ga0466957_0017464 | Ga0466957_0017464_2688_3323 | 209 |
| 56 | 3300045049 | Ga0466959_0000205 | Ga0466959_0000205_7629_8264 | 209 |
| 57 | 3300045836 | Ga0466958_0007784 | Ga0466958_0007784_2789_3424 | 209 |
| 58 | 3300046616 | Ga0495668_0286164 | Ga0495668_0286164_189_818 | 209 |
| 59 | 3300046684 | Ga0495669_0005499 | Ga0495669_0005499_1223_1852 | 209 |
| 60 | 3300048929 | Ga0496126_0093366 | Ga0496126_0093366_1486_2118 | 209 |
| 61 | 3300049571 | Ga0501034_0236625 | Ga0501034_0236625_11_652 | 209 |
| 62 | 3300049579 | Ga0501043_0033202 | Ga0501043_0033202_2732_3364 | 209 |
| 63 | 3300061719 | Ga0466962_0000112 | Ga0466962_0000112_14325_14960 | 209 |
| 64 | 3300044901 | Ga0466960_0105712 | Ga0466960_0105712_96_740 | 211 |
| 65 | 3300048922 | Ga0496119_0008938 | Ga0496119_0008938_3053_3697 | 211 |
| 66 | 3300048923 | Ga0496120_0065882 | Ga0496120_0065882_58_702 | 211 |
| 67 | 3300048925 | Ga0496122_0044664 | Ga0496122_0044664_232_876 | 211 |
| 68 | 3300048926 | Ga0496123_0060536 | Ga0496123_0060536_1217_1861 | 211 |
| 69 | 3300048929 | Ga0496126_0055342 | Ga0496126_0055342_218_862 | 211 |
| 70 | 3300009148 | Ga0105243_10201146 | Ga0105243_102011462 | 212 |
| 71 | 3300037471 | Ga0395905_0000450 | Ga0395905_0000450_28000_28641 | 212 |
| 72 | iso_pu_bacteria | 2534681786 | 2535485646 | 212 |
| 73 | 3300003323 | rootH1_10107864 | rootH1_101078641 | 213 |
| 74 | 3300053161 | Ga0500634_0009595 | Ga0500634_0009595_2007_2651 | 213 |
| 75 | 3300014326 | Ga0157380_10364477 | Ga0157380_103644772 | 214 |
| 76 | 3300032126 | Ga0307415_100377979 | Ga0307415_1003779791 | 214 |
| 77 | 3300031995 | Ga0307409_100081274 | Ga0307409_1000812742 | 215 |
| 78 | 3300037471 | Ga0395905_0057508 | Ga0395905_0057508_1761_2408 | 215 |
| 79 | 3300025303 | Ga0209051_1021353 | Ga0209051_10213532 | 217 |
| 80 | 3300037418 | Ga0395900_0048207 | Ga0395900_0048207_2697_3359 | 218 |
| 81 | 3300037471 | Ga0395905_0024961 | Ga0395905_0024961_668_1330 | 218 |
| 82 | 3300038443 | Ga0395901_0400909 | Ga0395901_0400909_542_1204 | 218 |
| 83 | 3300013105 | Ga0157369_11055780 | Ga0157369_110557801 | 219 |
| 84 | 3300031995 | Ga0307409_100507767 | Ga0307409_1005077672 | 219 |
| 85 | 3300032126 | Ga0307415_100355509 | Ga0307415_1003555092 | 219 |
| 86 | 3300005457 | Ga0070662_100129092 | Ga0070662_1001290922 | 220 |
| 87 | 3300025933 | Ga0207706_10444619 | Ga0207706_104446192 | 220 |
| 88 | 3300021388 | Ga0213875_10000152 | Ga0213875_1000015242 | 221 |
| 89 | 3300037471 | Ga0395905_0874406 | Ga0395905_0874406_20_685 | 221 |
| 90 | 3300037853 | Ga0436364_0154218 | Ga0436364_0154218_4241_4942 | 221 |
| 91 | 3300037312 | Ga0395899_0199808 | Ga0395899_0199808_612_1304 | 222 |
| 92 | 3300037471 | Ga0395905_0103854 | Ga0395905_0103854_1661_2353 | 222 |
| 93 | 3300048924 | Ga0496121_0003170 | Ga0496121_0003170_802_1476 | 222 |
| 94 | 3300005344 | Ga0070661_100039266 | Ga0070661_1000392663 | 224 |
| 95 | 3300005355 | Ga0070671_100118664 | Ga0070671_1001186643 | 224 |
| 96 | 3300005367 | Ga0070667_100016238 | Ga0070667_1000162389 | 224 |
| 97 | 3300005564 | Ga0070664_100021107 | Ga0070664_1000211077 | 224 |
| 98 | 3300005577 | Ga0068857_100028433 | Ga0068857_1000284333 | 224 |
| 99 | 3300005616 | Ga0068852_100200616 | Ga0068852_1002006163 | 224 |
| 100 | 3300005617 | Ga0068859_100127235 | Ga0068859_1001272353 | 224 |
| 101 | 3300005618 | Ga0068864_100002316 | Ga0068864_10000231620 | 224 |
| 102 | 3300005842 | Ga0068858_100039538 | Ga0068858_1000395382 | 224 |
| 103 | 3300006358 | Ga0068871_100665177 | Ga0068871_1006651772 | 224 |
| 104 | 3300006931 | Ga0097620_100127234 | Ga0097620_1001272343 | 224 |
| 105 | 3300009011 | Ga0105251_10209456 | Ga0105251_102094561 | 224 |
| 106 | 3300010375 | Ga0105239_10981862 | Ga0105239_109818622 | 224 |
| 107 | 3300013296 | Ga0157374_10438170 | Ga0157374_104381702 | 224 |
| 108 | 3300014325 | Ga0163163_10015544 | Ga0163163_1001554411 | 224 |
| 109 | 3300014497 | Ga0182008_10024282 | Ga0182008_100242823 | 224 |
| 110 | 3300014968 | Ga0157379_10003214 | Ga0157379_100032146 | 224 |
| 111 | 3300025920 | Ga0207649_10098320 | Ga0207649_100983202 | 224 |
| 112 | 3300025931 | Ga0207644_10022843 | Ga0207644_100228436 | 224 |
| 113 | 3300025932 | Ga0207690_10097733 | Ga0207690_100977332 | 224 |
| 114 | 3300025933 | Ga0207706_10085150 | Ga0207706_100851503 | 224 |
| 115 | 3300025941 | Ga0207711_10458935 | Ga0207711_104589352 | 224 |
| 116 | 3300026088 | Ga0207641_10082549 | Ga0207641_100825494 | 224 |
| 117 | 3300026116 | Ga0207674_10000641 | Ga0207674_1000064128 | 224 |
| 118 | 3300037471 | Ga0395905_0730332 | Ga0395905_0730332_83_757 | 224 |
| 119 | 3300048905 | Ga0496102_0104676 | Ga0496102_0104676_157_831 | 224 |
| 120 | 3300048906 | Ga0496103_0086039 | Ga0496103_0086039_605_1279 | 224 |
| 121 | 3300048911 | Ga0496108_0031015 | Ga0496108_0031015_726_1400 | 224 |
| 122 | 3300048912 | Ga0496109_0003365 | Ga0496109_0003365_9078_9752 | 224 |
| 123 | 3300048914 | Ga0496111_0085272 | Ga0496111_0085272_233_907 | 224 |
| 124 | 3300048915 | Ga0496112_0354867 | Ga0496112_0354867_158_832 | 224 |
| 125 | 3300048916 | Ga0496113_0048126 | Ga0496113_0048126_769_1443 | 224 |
| 126 | 3300005334 | Ga0068869_100043950 | Ga0068869_1000439503 | 227 |
| 127 | 3300005337 | Ga0070682_100031669 | Ga0070682_1000316692 | 227 |
| 128 | 3300005344 | Ga0070661_100027450 | Ga0070661_1000274502 | 227 |
| 129 | 3300005347 | Ga0070668_100517643 | Ga0070668_1005176432 | 227 |
| 130 | 3300005353 | Ga0070669_100146550 | Ga0070669_1001465503 | 227 |
| 131 | 3300005354 | Ga0070675_100071584 | Ga0070675_1000715846 | 227 |
| 132 | 3300005455 | Ga0070663_100160223 | Ga0070663_1001602232 | 227 |
| 133 | 3300005546 | Ga0070696_100040424 | Ga0070696_1000404242 | 227 |
| 134 | 3300005547 | Ga0070693_100040122 | Ga0070693_1000401222 | 227 |
| 135 | 3300005564 | Ga0070664_100011627 | Ga0070664_1000116279 | 227 |
| 136 | 3300005577 | Ga0068857_100022147 | Ga0068857_1000221473 | 227 |
| 137 | 3300005616 | Ga0068852_100402438 | Ga0068852_1004024382 | 227 |
| 138 | 3300005617 | Ga0068859_100064267 | Ga0068859_1000642673 | 227 |
| 139 | 3300005618 | Ga0068864_100529924 | Ga0068864_1005299242 | 227 |
| 140 | 3300005841 | Ga0068863_100064065 | Ga0068863_1000640652 | 227 |
| 141 | 3300005842 | Ga0068858_100009330 | Ga0068858_1000093302 | 227 |
| 142 | 3300005843 | Ga0068860_100004317 | Ga0068860_1000043179 | 227 |
| 143 | 3300005844 | Ga0068862_100015152 | Ga0068862_1000151529 | 227 |
| 144 | 3300006931 | Ga0097620_100064267 | Ga0097620_1000642673 | 227 |
| 145 | 3300009148 | Ga0105243_10168580 | Ga0105243_101685802 | 227 |
| 146 | 3300009177 | Ga0105248_10399545 | Ga0105248_103995452 | 227 |
| 147 | 3300011119 | Ga0105246_10030478 | Ga0105246_100304782 | 227 |
| 148 | 3300013100 | Ga0157373_10039733 | Ga0157373_100397336 | 227 |
| 149 | 3300013306 | Ga0163162_10252618 | Ga0163162_102526182 | 227 |
| 150 | 3300025912 | Ga0207707_10334270 | Ga0207707_103342701 | 227 |
| 151 | 3300025920 | Ga0207649_10053206 | Ga0207649_100532065 | 227 |
| 152 | 3300025923 | Ga0207681_10311054 | Ga0207681_103110542 | 227 |
| 153 | 3300025925 | Ga0207650_10073210 | Ga0207650_100732102 | 227 |
| 154 | 3300025926 | Ga0207659_10096025 | Ga0207659_100960252 | 227 |
| 155 | 3300025932 | Ga0207690_10137931 | Ga0207690_101379312 | 227 |
| 156 | 3300025933 | Ga0207706_10028407 | Ga0207706_100284072 | 227 |
| 157 | 3300025941 | Ga0207711_10384993 | Ga0207711_103849932 | 227 |
| 158 | 3300025942 | Ga0207689_10095092 | Ga0207689_100950922 | 227 |
| 159 | 3300025945 | Ga0207679_10007464 | Ga0207679_100074642 | 227 |
| 160 | 3300025949 | Ga0207667_10150690 | Ga0207667_101506902 | 227 |
| 161 | 3300025986 | Ga0207658_10316414 | Ga0207658_103164142 | 227 |
| 162 | 3300026035 | Ga0207703_10013952 | Ga0207703_1001395211 | 227 |
| 163 | 3300026088 | Ga0207641_10073982 | Ga0207641_100739826 | 227 |
| 164 | 3300026095 | Ga0207676_10006016 | Ga0207676_1000601612 | 227 |
| 165 | 3300026116 | Ga0207674_10000730 | Ga0207674_100007308 | 227 |
| 166 | 3300026118 | Ga0207675_100286599 | Ga0207675_1002865992 | 227 |
| 167 | 3300028380 | Ga0268265_10139824 | Ga0268265_101398242 | 227 |
| 168 | 3300028381 | Ga0268264_10012013 | Ga0268264_100120132 | 227 |
| 169 | 3300037466 | Ga0395898_0347233 | Ga0395898_0347233_321_1010 | 227 |
| 170 | 3300037471 | Ga0395905_0124117 | Ga0395905_0124117_1707_2405 | 227 |
| 171 | 3300038443 | Ga0395901_0182069 | Ga0395901_0182069_1035_1724 | 227 |
| 172 | 3300048910 | Ga0496107_0597325 | Ga0496107_0597325_94_798 | 227 |
| 173 | 3300048912 | Ga0496109_0294185 | Ga0496109_0294185_513_1202 | 227 |
| 174 | 3300048915 | Ga0496112_0067367 | Ga0496112_0067367_1881_2573 | 227 |
| 175 | 3300005841 | Ga0068863_100009046 | Ga0068863_1000090469 | 228 |
| 176 | 3300005843 | Ga0068860_100170691 | Ga0068860_1001706913 | 228 |
| 177 | 3300028381 | Ga0268264_10295647 | Ga0268264_102956471 | 228 |
| 178 | iso_pu_bacteria | 2996893221 | 2996896254 | 229 |
| 179 | 3300031901 | Ga0307406_10078433 | Ga0307406_100784332 | 239 |
| 180 | 3300005331 | Ga0070670_100352909 | Ga0070670_1003529091 | 241 |
| 181 | 3300001990 | JGI24737J22298_10002828 | JGI24737J22298_1000282810 | 246 |
| 182 | 3300005334 | Ga0068869_100133794 | Ga0068869_1001337942 | 246 |
| 183 | 3300005339 | Ga0070660_100038527 | Ga0070660_1000385275 | 246 |
| 184 | 3300005339 | Ga0070660_100284399 | Ga0070660_1002843992 | 246 |
| 185 | 3300005345 | Ga0070692_10001122 | Ga0070692_100011228 | 246 |
| 186 | 3300005347 | Ga0070668_100151390 | Ga0070668_1001513903 | 246 |
| 187 | 3300005353 | Ga0070669_100151329 | Ga0070669_1001513292 | 246 |
| 188 | 3300005354 | Ga0070675_100107529 | Ga0070675_1001075295 | 246 |
| 189 | 3300005366 | Ga0070659_100025024 | Ga0070659_1000250248 | 246 |
| 190 | 3300005444 | Ga0070694_100576605 | Ga0070694_1005766051 | 246 |
| 191 | 3300005457 | Ga0070662_100004724 | Ga0070662_1000047247 | 246 |
| 192 | 3300005543 | Ga0070672_100052135 | Ga0070672_1000521352 | 246 |
| 193 | 3300005545 | Ga0070695_100186179 | Ga0070695_1001861792 | 246 |
| 194 | 3300005617 | Ga0068859_100010791 | Ga0068859_1000107914 | 246 |
| 195 | 3300005618 | Ga0068864_100133281 | Ga0068864_1001332813 | 246 |
| 196 | 3300005841 | Ga0068863_100020609 | Ga0068863_1000206096 | 246 |
| 197 | 3300005842 | Ga0068858_100036280 | Ga0068858_1000362803 | 246 |
| 198 | 3300005843 | Ga0068860_100181443 | Ga0068860_1001814432 | 246 |
| 199 | 3300006871 | Ga0075434_100141015 | Ga0075434_1001410154 | 246 |
| 200 | 3300006931 | Ga0097620_100010791 | Ga0097620_1000107914 | 246 |
| 201 | 3300009093 | Ga0105240_10080534 | Ga0105240_100805345 | 246 |
| 202 | 3300009545 | Ga0105237_10283656 | Ga0105237_102836562 | 246 |
| 203 | 3300010375 | Ga0105239_10202330 | Ga0105239_102023302 | 246 |
| 204 | 3300013102 | Ga0157371_10045281 | Ga0157371_100452813 | 246 |
| 205 | 3300014745 | Ga0157377_10169805 | Ga0157377_101698052 | 246 |
| 206 | 3300025940 | Ga0207691_10012897 | Ga0207691_100128977 | 246 |
| 207 | 3300025942 | Ga0207689_10012184 | Ga0207689_100121846 | 246 |
| 208 | 3300026023 | Ga0207677_10069654 | Ga0207677_100696543 | 246 |
| 209 | 3300026035 | Ga0207703_10004611 | Ga0207703_1000461111 | 246 |
| 210 | 3300026088 | Ga0207641_10043057 | Ga0207641_100430573 | 246 |
| 211 | 3300028380 | Ga0268265_10021714 | Ga0268265_100217142 | 246 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3r20-assembly1.cif.gz_A | crystal structure of cytidylate kinase from mycobacterium smegmatis | 0.8894 | 39 | 238 |
| 2feo-assembly1.cif.gz_A | mutant r188m of the cytidine monophosphate kinase from e. coli complexed with dcmp | 0.8688 | 39 | 241 |
| 4e22-assembly1.cif.gz_A | structure of cytidine monophosphate kinase from yersinia pseudotuberculosis | 0.8677 | 34 | 243 |
| 1kdt-assembly1.cif.gz_A | cytidine monophosphate kinase from e.coli in complex with 2',3'-dideoxy-cytidine monophosphate | 0.867 | 39 | 242 |
| 2fem-assembly1.cif.gz_A | mutant r188m of the cytidine monophosphate kinase from e. coli | 0.8526 | 39 | 242 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2femA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8526 | 39 | 242 | 3.40.50.300 |
| 2h92C00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8318 | 39 | 241 | 3.40.50.300 |
| 2femA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8186 | 39 | 242 | 3.40.50.300 |
| 4dieB00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.802 | 39 | 241 | 3.40.50.300 |
| af_Q2FYF5_1_183_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8003 | 73 | 241 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A528PHJ3-F1-model_v4 | deleted | 0.9864 | 144 | 245 |
|
| AF-A0A352WXH7-F1-model_v4 | (d)CMP kinase (EC 2.7.4.25) | 0.9843 | 148 | 245 |
GO:0005524
GO:0036430 GO:0036431 |
| AF-A0A350TV26-F1-model_v4 | deleted | 0.982 | 148 | 246 |
|
| AF-A0A529AYW8-F1-model_v4 | (d)CMP kinase (EC 2.7.4.25) | 0.9774 | 131 | 245 |
GO:0005524
GO:0036430 GO:0036431 |
| AF-A0A5A7MY55-F1-model_v4 | merged | 0.9734 | 158 | 242 |
|
Predicted Structure (AlphaFold2)
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