F320991

General Info

Members Datasets Scaffolds Average Seq Length
210 147 193 585

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221649|2644278977
Length 655
Sequence HGGGAGGGGVRNGGGGGGGGRGGRVSAADEQAQRAINAEAPRIPHLLSRIAALFAPYKTELIITVVLVLIGAGLSVIPPLITQRVFDHALFPPSGEPDLPLLGWLVAAMVLIFVVGALLGVWQTWLTATVGNSVMGSLRVRLFTHLQAMELSFFTRTKTGVIQSRLQNDVGGVASVLTNTISSVLGNTVTVIAAFVAMLILNWQLTLIAVVLMPIMVIAQRRVGQVRARIAAKTQESLSEMTAITQETLSVSGILLSKSFTRQGTEIARYADENANQVSLQVRQQMSGQWFFALVNIFLSSIPAIVYLAAGYLVAGGAPDVTAGTIVAFTTVQARLMFPLMGLMRVALDLQTSSALFARIFEYLDLKPAIVDAPDAVELPASAADNGVTGPDAAELGRVEFEHVSFLYPDQAADARPTLNDVSFVVEPGQYAAFVGPSGAGKTTVSYLVPRLYEATSGAVKFAGVDVRGLTQRSLVSNIGIVSQETYLFHATIAENLRYAKPDATDAELERAARAANIHATIDSFPDGYATVVGERGYRLSGGEKQRIAIARVLLKDPAVLVLDEATSALDVISERIVQSALDDAARGRTTIAIAHRLSTVVNADVIFVVEAGRLVERGTHVELLAAGGSYARLFAEQSALAAVGLELPVGELPE

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2643221549 Agromyces sp. Root1464 Isolate Unclassified
3 2643221616 Leifsonia sp. Root227 Isolate Unclassified
4 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
5 2643221649 Leifsonia sp. Root4 Isolate Unclassified
6 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
7 2808606372 Agromyces sp. 23-23 Isolate Unclassified
8 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
9 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
10 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
11 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
12 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
13 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
14 2928153084 Leifsonia sp. 563 Isolate Unclassified
15 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
16 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
19 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
22 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
23 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
24 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
25 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
26 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
27 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
28 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
32 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
105 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
106 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
107 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
108 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
109 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
110 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
111 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
136 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
137 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
138 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
139 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
140 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
141 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
142 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
143 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
144 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
147 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.95
Metatranscriptomes 0.95
Isolates 8.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.86
Nodule 0
Rhizoplane 1.43
Rhizosphere 63.33
Stem 0
Stem Tuber 0.48
Unclassified 11.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10009090 3300001979 Bacteria 3909
2 JGI24737J22298_10011981 3300001990 Bacteria 2832
3 JGI24735J21928_10000721 3300002067 Bacteria 11747
4 JGI25164J39214_1000209 3300002772 Bacteria 49837
5 JGI25165J46597_1000125 3300003214 Bacteria 131155
6 JGI25165J46597_1001412 3300003214 Bacteria 13006
7 Ga0006562J51391_1001851 3300003578 Bacteria 19660
8 Ga0055539_1000135 3300003752 Bacteria 77054
9 Ga0055533_1000002 3300003756 Bacteria 1196393
10 Ga0055525_1000303 3300003759 Bacteria 40809
11 Ga0055527_1000003 3300003760 Bacteria 705001
12 Ga0055542_1000005 3300003762 Bacteria 550280
13 Ga0055529_1000006 3300003763 Bacteria 416978
14 Ga0065714_10070528 3300005288 Bacteria 3827
15 Ga0070658_10005097 3300005327 Bacteria 10689
16 Ga0070682_100037024 3300005337 Bacteria 2985
17 Ga0068868_100077112 3300005338 Bacteria 2666
18 Ga0070673_100108568 3300005364 Bacteria 2298
19 Ga0070659_100005721 3300005366 Bacteria 8951
20 Ga0070659_100138406 3300005366 Bacteria 1981
21 Ga0070667_100090940 3300005367 Bacteria 2623
22 Ga0070708_100003026 3300005445 Bacteria 13051
23 Ga0070708_100011735 3300005445 Bacteria 7132
24 Ga0068853_100005982 3300005539 Bacteria 9616
25 Ga0068855_100038586 3300005563 Bacteria 5674
26 Ga0068855_100049589 3300005563 Bacteria 4951
27 Ga0068855_100176488 3300005563 Bacteria 2417
28 Ga0068859_100029332 3300005617 Bacteria 5521
29 Ga0068851_10000022 3300005834 Bacteria 129607
30 Ga0068858_100000016 3300005842 Bacteria 193130
31 Ga0075365_10009864 3300006038 Bacteria 5524
32 Ga0075364_10002282 3300006051 Bacteria 10743
33 Ga0075364_10024175 3300006051 Bacteria 3854
34 Ga0075364_10092305 3300006051 Bacteria 2010
35 Ga0097620_100029332 3300006931 Bacteria 5521
36 Ga0075435_100032042 3300007076 Bacteria 4149
37 Ga0105240_10038721 3300009093 Bacteria 6113
38 Ga0105240_10083770 3300009093 Bacteria 3912
39 Ga0105241_10000376 3300009174 Bacteria 33985
40 Ga0105248_10028577 3300009177 Bacteria 6213
41 Ga0105248_10062902 3300009177 Bacteria 4165
42 Ga0105237_10001065 3300009545 Bacteria 36852
43 Ga0105238_10002921 3300009551 Bacteria 17057
44 Ga0105239_10154114 3300010375 Bacteria 2565
45 Ga0157369_10000225 3300013105 Bacteria 78054
46 Ga0157379_10011123 3300014968 Bacteria 7847
47 Ga0206353_10041064 3300020082 Bacteria 7817
48 Ga0209566_100032 3300025225 Bacteria 338313
49 Ga0209674_100001 3300025226 Bacteria 4013750
50 Ga0209672_100003 3300025228 Bacteria 1560476
51 Ga0209563_100001 3300025230 Bacteria 4013775
52 Ga0209563_100270 3300025230 Bacteria 22251
53 Ga0207427_100039 3300025231 Bacteria 291576
54 Ga0209437_101075 3300025233 Bacteria 8842
55 Ga0209677_100001 3300025253 Bacteria 4013787
56 Ga0209677_101506 3300025253 Bacteria 9987
57 Ga0209148_1000004 3300025254 Bacteria 1844481
58 Ga0209148_1001614 3300025254 Bacteria 10508
59 Ga0209233_1000014 3300025261 Bacteria 996641
60 Ga0209455_1000046 3300025272 Bacteria 382681
61 Ga0207656_10000005 3300025321 Bacteria 490514
62 Ga0207680_10062369 3300025903 Bacteria 2277
63 Ga0207647_10034934 3300025904 Bacteria 3206
64 Ga0207705_10000001 3300025909 Bacteria 2061880
65 Ga0207705_10034969 3300025909 Bacteria 3594
66 Ga0207654_10000001 3300025911 Bacteria 1816198
67 Ga0207695_10009179 3300025913 Bacteria 12268
68 Ga0207695_10014082 3300025913 Bacteria 9497
69 Ga0207671_10000016 3300025914 Bacteria 435413
70 Ga0207657_10005458 3300025919 Bacteria 13275
71 Ga0207694_10000057 3300025924 Bacteria 146441
72 Ga0207687_10008806 3300025927 Bacteria 6595
73 Ga0207687_10017042 3300025927 Bacteria 4776
74 Ga0207711_10001592 3300025941 Bacteria 20982
75 Ga0207667_10006045 3300025949 Bacteria 14724
76 Ga0207667_10012659 3300025949 Bacteria 9695
77 Ga0207667_10063586 3300025949 Bacteria 3856
78 Ga0207658_10105285 3300025986 Bacteria 2218
79 Ga0207703_10000786 3300026035 Bacteria 31228
80 Ga0207639_10010466 3300026041 Bacteria 6424
81 Ga0207639_10025901 3300026041 Bacteria 4257
82 Ga0207676_10140008 3300026095 Bacteria 2070
83 Ga0207674_10001991 3300026116 Bacteria 25887
84 Ga0207675_100157337 3300026118 Bacteria 2166
85 Ga0207698_10001080 3300026142 Bacteria 15859
86 Ga0307514_10020455 3300031649 Bacteria 5401
87 Ga0307514_10036409 3300031649 Bacteria 3911
88 Ga0395899_0009534 3300037312 Bacteria 7452
89 Ga0395899_0037824 3300037312 Bacteria 3617
90 Ga0395898_0000611 3300037466 Bacteria 65932
91 Ga0436364_1455910 3300037853 Bacteria 12311
92 Ga0451577_0014161 3300042876 Bacteria 7434
93 Ga0466972_0019218 3300044658 Bacteria 3418
94 Ga0466965_0000107 3300044683 Bacteria 23683
95 Ga0466961_0012433 3300044693 Bacteria 5446
96 Ga0466961_0018352 3300044693 Bacteria 4499
97 Ga0453684_0029473 3300044712 Bacteria 7789
98 Ga0466971_0008794 3300044719 Bacteria 4407
99 Ga0466970_0064487 3300044765 Bacteria 1964
100 Ga0466960_0020095 3300044901 Bacteria 2953
101 Ga0466959_0008287 3300045049 Bacteria 7341
102 Ga0495590_0000141 3300046457 Bacteria 43370
103 Ga0495650_0000555 3300046471 Bacteria 53150
104 Ga0495672_0010602 3300047320 Bacteria 6551
105 Ga0495686_0041282 3300047472 Bacteria 2938
106 Ga0496101_0055658 3300048904 Bacteria 2858
107 Ga0496105_0034211 3300048908 Bacteria 4178
108 Ga0496114_0049872 3300048917 Bacteria 3483
109 Ga0496116_0055273 3300048919 Bacteria 2609
110 Ga0496117_0007199 3300048920 Bacteria 10970
111 Ga0496118_0001710 3300048921 Bacteria 32039
112 Ga0496118_0039214 3300048921 Bacteria 3783
113 Ga0496119_0001096 3300048922 Bacteria 34129
114 Ga0496119_0025938 3300048922 Bacteria 4078
115 Ga0496120_0001715 3300048923 Bacteria 25001
116 Ga0496120_0050288 3300048923 Bacteria 2387
117 Ga0496121_0000025 3300048924 Bacteria 453467
118 Ga0496122_0011351 3300048925 Bacteria 9034
119 Ga0496123_0003239 3300048926 Bacteria 18524
120 Ga0496126_0008755 3300048929 Bacteria 10864
121 Ga0496126_0053140 3300048929 Bacteria 3677
122 Ga0501032_0019919 3300049569 Bacteria 4682
123 Ga0501033_0002751 3300049570 Bacteria 14745
124 Ga0501033_0018565 3300049570 Bacteria 5255
125 Ga0501033_0046366 3300049570 Bacteria 3232
126 Ga0501033_0096235 3300049570 Bacteria 2163
127 Ga0501034_0009025 3300049571 Bacteria 10472
128 Ga0501034_0012965 3300049571 Bacteria 8592
129 Ga0501034_0014253 3300049571 Bacteria 8193
130 Ga0501034_0015713 3300049571 Bacteria 7773
131 Ga0501034_0021826 3300049571 Bacteria 6522
132 Ga0501034_0027923 3300049571 Bacteria 5738
133 Ga0501034_0074260 3300049571 Bacteria 3409
134 Ga0501034_0089581 3300049571 Bacteria 3074
135 Ga0501036_0022489 3300049572 Bacteria 5303
136 Ga0501037_0022058 3300049573 Bacteria 4713
137 Ga0501037_0031752 3300049573 Bacteria 3899
138 Ga0501037_0048497 3300049573 Bacteria 3111
139 Ga0501038_0004800 3300049574 Bacteria 12556
140 Ga0501038_0020362 3300049574 Bacteria 5965
141 Ga0501038_0049917 3300049574 Bacteria 3616
142 Ga0501039_0008755 3300049575 Bacteria 7709
143 Ga0501039_0022589 3300049575 Bacteria 4829
144 Ga0501042_0000697 3300049578 Bacteria 18269
145 Ga0501043_0003774 3300049579 Bacteria 12450
146 Ga0501043_0029390 3300049579 Bacteria 4318
147 Ga0501043_0051532 3300049579 Bacteria 3234
148 Ga0501043_0116872 3300049579 Bacteria 2093
149 Ga0501043_0126344 3300049579 Bacteria 2005
150 Ga0501046_0001034 3300049580 Bacteria 27198
151 Ga0501046_0008019 3300049580 Bacteria 9230
152 Ga0501046_0011673 3300049580 Bacteria 7507
153 Ga0501047_0003657 3300049581 Bacteria 14496
154 Ga0501047_0020174 3300049581 Bacteria 6399
155 Ga0501047_0060964 3300049581 Bacteria 3639
156 Ga0501047_0071498 3300049581 Bacteria 3339
157 Ga0501048_0008537 3300049582 Bacteria 7744
158 Ga0501069_0047732 3300049585 Bacteria 2377
159 Ga0501070_0012311 3300049586 Bacteria 7218
160 Ga0501070_0031747 3300049586 Bacteria 4425
161 Ga0501072_0016237 3300049588 Bacteria 5711
162 Ga0501080_0000264 3300049742 Bacteria 39664
163 Ga0501083_0000162 3300049744 Bacteria 43696
164 Ga0501083_0006250 3300049744 Bacteria 8449
165 Ga0501035_0010632 3300049822 Bacteria 8521
166 Ga0501035_0024437 3300049822 Bacteria 5541
167 Ga0501044_0003794 3300049823 Bacteria 16974
168 Ga0501044_0042948 3300049823 Bacteria 4698
169 Ga0501044_0068418 3300049823 Bacteria 3617
170 Ga0501044_0098789 3300049823 Bacteria 2938
171 nmdc:mga00v17_23757_c1 3300050491 Bacteria 3550
172 nmdc:mga0yw44_6726_c1 3300050492 Bacteria 5585
173 nmdc:mga0a205_14408_c1 3300050515 Bacteria 7375
174 Ga0500635_0000078 3300053080 Bacteria 63528
175 Ga0500643_000297 3300053087 Bacteria 41873
176 Ga0500651_0001314 3300053093 Bacteria 12405
177 Ga0500556_0000087 3300053104 Bacteria 86120
178 Ga0500562_002157 3300053108 Bacteria 4913
179 Ga0500593_005900 3300053117 Bacteria 4866
180 Ga0500559_0000673 3300053136 Bacteria 22861
181 Ga0500559_0000768 3300053136 Bacteria 21034
182 Ga0500559_0001378 3300053136 Bacteria 13874
183 Ga0500559_0001762 3300053136 Bacteria 11882
184 Ga0500568_0009871 3300053139 Bacteria 4510
185 Ga0500568_0011170 3300053139 Bacteria 4182
186 Ga0500573_0000011 3300053140 Bacteria 209484
187 Ga0500573_0005216 3300053140 Bacteria 6937
188 Ga0500573_0038890 3300053140 Bacteria 2749
189 Ga0500573_0053819 3300053140 Bacteria 2312
190 Ga0500573_0059073 3300053140 Bacteria 2198
191 Ga0500577_0003973 3300053142 Bacteria 3870
192 Ga0500616_0000679 3300053153 Bacteria 39900
193 Ga0500620_000016 3300053155 Bacteria 36323

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8046352972 8046355206 475
2 3300006038 Ga0075365_10009864 Ga0075365_100098643 480
3 3300050492 nmdc:mga0yw44_6726_c1 nmdc:mga0yw44_6726_c1_1835_3685 492
4 3300006051 Ga0075364_10002282 Ga0075364_100022824 493
5 3300050491 nmdc:mga00v17_23757_c1 nmdc:mga00v17_23757_c1_1624_3474 493
6 3300044765 Ga0466970_0064487 Ga0466970_0064487_345_1952 494
7 3300005445 Ga0070708_100003026 Ga0070708_10000302612 507
8 3300049574 Ga0501038_0020362 Ga0501038_0020362_4001_5872 523
9 3300053108 Ga0500562_002157 Ga0500562_002157_2713_4554 525
10 3300050515 nmdc:mga0a205_14408_c1 nmdc:mga0a205_14408_c1_318_2123 526
11 3300009551 Ga0105238_10002921 Ga0105238_100029213 528
12 3300025924 Ga0207694_10000057 Ga0207694_1000005716 528
13 3300005834 Ga0068851_10000022 Ga0068851_10000022123 531
14 3300009545 Ga0105237_10001065 Ga0105237_1000106520 531
15 3300025321 Ga0207656_10000005 Ga0207656_10000005383 531
16 3300025914 Ga0207671_10000016 Ga0207671_1000001677 531
17 3300026116 Ga0207674_10001991 Ga0207674_100019917 531
18 3300053139 Ga0500568_0009871 Ga0500568_0009871_555_2417 532
19 3300010375 Ga0105239_10154114 Ga0105239_101541141 533
20 3300006051 Ga0075364_10024175 Ga0075364_100241752 534
21 3300007076 Ga0075435_100032042 Ga0075435_1000320422 540
22 3300042876 Ga0451577_0014161 Ga0451577_0014161_795_2582 540
23 3300044712 Ga0453684_0029473 Ga0453684_0029473_5163_6950 540
24 3300025254 Ga0209148_1001614 Ga0209148_10016143 542
25 3300048919 Ga0496116_0055273 Ga0496116_0055273_312_2186 542
26 3300005327 Ga0070658_10005097 Ga0070658_100050973 543
27 3300005338 Ga0068868_100077112 Ga0068868_1000771122 543
28 3300005366 Ga0070659_100005721 Ga0070659_1000057215 543
29 3300005367 Ga0070667_100090940 Ga0070667_1000909402 543
30 3300005539 Ga0068853_100005982 Ga0068853_1000059822 543
31 3300014968 Ga0157379_10011123 Ga0157379_100111232 543
32 3300025909 Ga0207705_10034969 Ga0207705_100349692 543
33 3300025919 Ga0207657_10005458 Ga0207657_100054583 543
34 3300025949 Ga0207667_10012659 Ga0207667_100126594 543
35 3300025986 Ga0207658_10105285 Ga0207658_101052852 543
36 3300026041 Ga0207639_10010466 Ga0207639_100104664 543
37 3300026118 Ga0207675_100157337 Ga0207675_1001573371 543
38 3300037853 Ga0436364_1455910 Ga0436364_1455910_7533_9413 543
39 3300053136 Ga0500559_0001762 Ga0500559_0001762_7732_9567 543
40 3300009174 Ga0105241_10000376 Ga0105241_100003765 544
41 3300025911 Ga0207654_10000001 Ga0207654_10000001939 544
42 3300026142 Ga0207698_10001080 Ga0207698_100010805 544
43 3300053140 Ga0500573_0000011 Ga0500573_0000011_111983_113818 544
44 3300005445 Ga0070708_100011735 Ga0070708_1000117354 545
45 3300048929 Ga0496126_0053140 Ga0496126_0053140_473_2350 545
46 3300048924 Ga0496121_0000025 Ga0496121_0000025_426615_428519 546
47 3300009093 Ga0105240_10038721 Ga0105240_100387212 547
48 3300025913 Ga0207695_10014082 Ga0207695_100140822 547
49 3300037312 Ga0395899_0037824 Ga0395899_0037824_256_2106 547
50 3300037466 Ga0395898_0000611 Ga0395898_0000611_1549_3399 547
51 3300044683 Ga0466965_0000107 Ga0466965_0000107_19552_21417 547
52 3300049588 Ga0501072_0016237 Ga0501072_0016237_1396_3270 547
53 3300005364 Ga0070673_100108568 Ga0070673_1001085682 548
54 3300048925 Ga0496122_0011351 Ga0496122_0011351_7023_8837 548
55 3300048926 Ga0496123_0003239 Ga0496123_0003239_12538_14352 548
56 3300049571 Ga0501034_0027923 Ga0501034_0027923_3699_5573 551
57 3300053155 Ga0500620_000016 Ga0500620_000016_8389_10269 552
58 3300049569 Ga0501032_0019919 Ga0501032_0019919_1882_3774 553
59 3300049570 Ga0501033_0002751 Ga0501033_0002751_2943_4835 553
60 3300049571 Ga0501034_0012965 Ga0501034_0012965_5424_7316 553
61 3300049573 Ga0501037_0031752 Ga0501037_0031752_126_2018 553
62 3300049574 Ga0501038_0004800 Ga0501038_0004800_3258_5150 553
63 3300049575 Ga0501039_0008755 Ga0501039_0008755_5346_7238 553
64 3300049580 Ga0501046_0001034 Ga0501046_0001034_20594_22486 553
65 3300049581 Ga0501047_0060964 Ga0501047_0060964_115_2007 553
66 3300049744 Ga0501083_0006250 Ga0501083_0006250_705_2672 553
67 3300049822 Ga0501035_0010632 Ga0501035_0010632_909_2801 553
68 3300049823 Ga0501044_0042948 Ga0501044_0042948_1755_3647 553
69 3300053080 Ga0500635_0000078 Ga0500635_0000078_7760_9670 554
70 3300002772 JGI25164J39214_1000209 JGI25164J39214_100020938 557
71 3300003214 JGI25165J46597_1000125 JGI25165J46597_100012574 557
72 3300003214 JGI25165J46597_1001412 JGI25165J46597_10014123 557
73 3300025231 Ga0207427_100039 Ga0207427_100039121 557
74 3300025233 Ga0209437_101075 Ga0209437_1010754 557
75 3300025261 Ga0209233_1000014 Ga0209233_1000014397 557
76 3300048921 Ga0496118_0001710 Ga0496118_0001710_4925_6799 557
77 3300048922 Ga0496119_0025938 Ga0496119_0025938_457_2364 557
78 3300053104 Ga0500556_0000087 Ga0500556_0000087_60043_61863 557
79 3300053117 Ga0500593_005900 Ga0500593_005900_2063_3883 557
80 3300053140 Ga0500573_0059073 Ga0500573_0059073_22_1872 557
81 3300009093 Ga0105240_10083770 Ga0105240_100837702 558
82 3300025913 Ga0207695_10009179 Ga0207695_100091797 558
83 3300048921 Ga0496118_0039214 Ga0496118_0039214_1168_3054 558
84 3300048922 Ga0496119_0001096 Ga0496119_0001096_19922_21808 558
85 3300048923 Ga0496120_0001715 Ga0496120_0001715_7252_9138 558
86 3300053142 Ga0500577_0003973 Ga0500577_0003973_1943_3778 558
87 3300025903 Ga0207680_10062369 Ga0207680_100623692 559
88 3300053139 Ga0500568_0011170 Ga0500568_0011170_489_2486 559
89 3300053093 Ga0500651_0001314 Ga0500651_0001314_2000_3886 560
90 3300026041 Ga0207639_10025901 Ga0207639_100259012 561
91 3300049570 Ga0501033_0046366 Ga0501033_0046366_881_2707 561
92 3300049571 Ga0501034_0021826 Ga0501034_0021826_21_1847 561
93 3300049579 Ga0501043_0051532 Ga0501043_0051532_251_2077 561
94 3300049581 Ga0501047_0020174 Ga0501047_0020174_2323_4149 561
95 3300053140 Ga0500573_0053819 Ga0500573_0053819_98_2113 561
96 3300053153 Ga0500616_0000679 Ga0500616_0000679_13186_15060 561
97 3300005366 Ga0070659_100138406 Ga0070659_1001384061 562
98 3300005563 Ga0068855_100176488 Ga0068855_1001764882 562
99 3300009177 Ga0105248_10028577 Ga0105248_100285773 562
100 3300025941 Ga0207711_10001592 Ga0207711_1000159211 562
101 3300049571 Ga0501034_0074260 Ga0501034_0074260_22_1851 562
102 3300049573 Ga0501037_0022058 Ga0501037_0022058_1364_3211 562
103 3300049579 Ga0501043_0029390 Ga0501043_0029390_1751_3598 562
104 3300049581 Ga0501047_0003657 Ga0501047_0003657_10517_12364 562
105 3300049822 Ga0501035_0024437 Ga0501035_0024437_2143_3990 562
106 3300049823 Ga0501044_0003794 Ga0501044_0003794_7513_9360 562
107 3300053140 Ga0500573_0005216 Ga0500573_0005216_4756_6606 562
108 3300005288 Ga0065714_10070528 Ga0065714_100705283 563
109 3300049571 Ga0501034_0014253 Ga0501034_0014253_5489_7372 563
110 3300031649 Ga0307514_10036409 Ga0307514_100364094 564
111 3300044658 Ga0466972_0019218 Ga0466972_0019218_855_2750 564
112 3300044693 Ga0466961_0012433 Ga0466961_0012433_498_2390 564
113 3300044693 Ga0466961_0018352 Ga0466961_0018352_2041_3861 564
114 3300044719 Ga0466971_0008794 Ga0466971_0008794_144_1964 564
115 3300044901 Ga0466960_0020095 Ga0466960_0020095_732_2552 564
116 3300053136 Ga0500559_0000673 Ga0500559_0000673_20364_22220 564
117 3300006051 Ga0075364_10092305 Ga0075364_100923052 565
118 3300025909 Ga0207705_10000001 Ga0207705_100000011401 565
119 3300053136 Ga0500559_0000768 Ga0500559_0000768_3090_4925 565
120 3300053136 Ga0500559_0001378 Ga0500559_0001378_11558_13393 565
121 3300053140 Ga0500573_0038890 Ga0500573_0038890_798_2636 565
122 3300031649 Ga0307514_10020455 Ga0307514_100204552 566
123 3300045049 Ga0466959_0008287 Ga0466959_0008287_2035_3927 566
124 3300048923 Ga0496120_0050288 Ga0496120_0050288_74_1993 566
125 3300049571 Ga0501034_0089581 Ga0501034_0089581_925_2784 566
126 3300049579 Ga0501043_0116872 Ga0501043_0116872_46_1905 566
127 3300049585 Ga0501069_0047732 Ga0501069_0047732_369_2228 566
128 3300005842 Ga0068858_100000016 Ga0068858_10000001652 567
129 3300026035 Ga0207703_10000786 Ga0207703_1000078614 567
130 3300046457 Ga0495590_0000141 Ga0495590_0000141_39974_41842 567
131 3300046471 Ga0495650_0000555 Ga0495650_0000555_45215_47101 567
132 3300047320 Ga0495672_0010602 Ga0495672_0010602_254_2119 567
133 3300049570 Ga0501033_0096235 Ga0501033_0096235_92_1990 567
134 3300049571 Ga0501034_0009025 Ga0501034_0009025_5148_7040 567
135 3300049578 Ga0501042_0000697 Ga0501042_0000697_1300_3252 567
136 3300049581 Ga0501047_0071498 Ga0501047_0071498_223_2088 567
137 3300053087 Ga0500643_000297 Ga0500643_000297_36360_38255 567
138 iso_pu_bacteria 2919443155 2919444064 567
139 3300005563 Ga0068855_100038586 Ga0068855_1000385864 568
140 3300005563 Ga0068855_100049589 Ga0068855_1000495892 568
141 3300005617 Ga0068859_100029332 Ga0068859_1000293322 568
142 3300006931 Ga0097620_100029332 Ga0097620_1000293322 568
143 3300009177 Ga0105248_10062902 Ga0105248_100629022 568
144 3300025927 Ga0207687_10008806 Ga0207687_100088063 568
145 3300025927 Ga0207687_10017042 Ga0207687_100170422 568
146 3300025949 Ga0207667_10006045 Ga0207667_100060455 568
147 3300025949 Ga0207667_10063586 Ga0207667_100635862 568
148 3300026095 Ga0207676_10140008 Ga0207676_101400081 568
149 3300049570 Ga0501033_0018565 Ga0501033_0018565_1953_3821 568
150 3300049571 Ga0501034_0015713 Ga0501034_0015713_109_1977 568
151 3300049572 Ga0501036_0022489 Ga0501036_0022489_2345_4213 568
152 3300049573 Ga0501037_0048497 Ga0501037_0048497_1164_3032 568
153 3300049574 Ga0501038_0049917 Ga0501038_0049917_645_2513 568
154 3300049575 Ga0501039_0022589 Ga0501039_0022589_1813_3681 568
155 3300049579 Ga0501043_0003774 Ga0501043_0003774_6087_7955 568
156 3300049579 Ga0501043_0126344 Ga0501043_0126344_20_1894 568
157 3300049580 Ga0501046_0011673 Ga0501046_0011673_3826_5694 568
158 3300049582 Ga0501048_0008537 Ga0501048_0008537_3401_5269 568
159 3300049586 Ga0501070_0031747 Ga0501070_0031747_2386_4254 568
160 3300049742 Ga0501080_0000264 Ga0501080_0000264_21824_23698 568
161 3300049823 Ga0501044_0098789 Ga0501044_0098789_241_2109 568
162 3300003760 Ga0055527_1000003 Ga0055527_1000003184 569
163 3300003762 Ga0055542_1000005 Ga0055542_100000548 569
164 3300003763 Ga0055529_1000006 Ga0055529_1000006184 569
165 3300025228 Ga0209672_100003 Ga0209672_1000031023 569
166 3300025254 Ga0209148_1000004 Ga0209148_10000041318 569
167 3300025272 Ga0209455_1000046 Ga0209455_1000046337 569
168 3300037312 Ga0395899_0009534 Ga0395899_0009534_168_2051 569
169 iso_pu_bacteria 2857737099 2857737700 569
170 3300048929 Ga0496126_0008755 Ga0496126_0008755_1657_3537 570
171 3300049580 Ga0501046_0008019 Ga0501046_0008019_6889_8760 570
172 3300049823 Ga0501044_0068418 Ga0501044_0068418_1551_3422 570
173 iso_pu_bacteria 2643221616 2644094789 570
174 iso_pu_bacteria 2808606372 2808903671 570
175 iso_pu_bacteria 2935409751 2935410203 570
176 iso_pu_bacteria 2939660829 2939663824 570
177 3300013105 Ga0157369_10000225 Ga0157369_1000022560 571
178 3300048904 Ga0496101_0055658 Ga0496101_0055658_827_2698 571
179 3300048917 Ga0496114_0049872 Ga0496114_0049872_1222_3093 571
180 3300049744 Ga0501083_0000162 Ga0501083_0000162_20627_22534 571
181 iso_pu_bacteria 2585428094 2587864629 571
182 iso_pu_bacteria 2643221549 2643766532 571
183 iso_pu_bacteria 2643221649 2644278977 571
184 3300001979 JGI24740J21852_10009090 JGI24740J21852_100090902 572
185 3300001990 JGI24737J22298_10011981 JGI24737J22298_100119812 572
186 3300002067 JGI24735J21928_10000721 JGI24735J21928_1000072112 572
187 3300003578 Ga0006562J51391_1001851 Ga0006562J51391_10018512 572
188 3300003752 Ga0055539_1000135 Ga0055539_100013541 572
189 3300003756 Ga0055533_1000002 Ga0055533_100000244 572
190 3300003759 Ga0055525_1000303 Ga0055525_10003033 572
191 3300005337 Ga0070682_100037024 Ga0070682_1000370241 572
192 3300020082 Ga0206353_10041064 Ga0206353_100410643 572
193 3300025225 Ga0209566_100032 Ga0209566_10003244 572
194 3300025226 Ga0209674_100001 Ga0209674_1000013522 572
195 3300025230 Ga0209563_100001 Ga0209563_1000013522 572
196 3300025230 Ga0209563_100270 Ga0209563_1002702 572
197 3300025253 Ga0209677_100001 Ga0209677_1000013522 572
198 3300025253 Ga0209677_101506 Ga0209677_1015067 572
199 3300025904 Ga0207647_10034934 Ga0207647_100349342 572
200 3300047472 Ga0495686_0041282 Ga0495686_0041282_844_2868 572
201 3300048908 Ga0496105_0034211 Ga0496105_0034211_1130_3007 572
202 3300048920 Ga0496117_0007199 Ga0496117_0007199_652_2538 572
203 3300049586 Ga0501070_0012311 Ga0501070_0012311_1360_3225 572
204 iso_pu_bacteria 2643221632 2644181213 572
205 iso_pu_bacteria 2721755702 2723640730 572
206 iso_pu_bacteria 2844841374 2844845136 572
207 iso_pu_bacteria 2884763398 2884764144 572
208 iso_pu_bacteria 2919055335 2919056972 572
209 iso_pu_bacteria 2919523602 2919527030 572
210 iso_pu_bacteria 2928153084 2928154688 572

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

61

340

0.95

PF00005

ABC_tran

ABC transporter

419

568

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ghi-assembly1.cif.gz_A crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9567 320 564
2ghi-assembly4.cif.gz_D crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9529 320 562
4q7l-assembly3.cif.gz_C structure of nbd288 of tm287/288 0.9443 322 564
5eum-assembly1.cif.gz_B 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. 0.9431 311 563
1mt0-assembly1.cif.gz_A atp-binding domain of hemolysin b from escherichia coli 0.9426 324 563
ID Description Score Start End Superfamily
af_Q19015_1020_1270_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9744 347 564 3.40.50.300
af_Q7K6A5_1228_1417_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9735 381 561 3.40.50.300
af_Q19015_398_655_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9666 355 568 1.20.1560.10
af_Q2FVJ2_326_574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9649 315 567 3.40.50.300
af_Q61102_466_725_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9638 320 570 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7W1UKJ8-F1-model_v4 ATP-binding cassette domain-containing protein 0.9881 344 476 GO:0005524
GO:0016887
GO:0042626
AF-A0A519X245-F1-model_v4 deleted 0.9845 370 570
AF-A0A257Y822-F1-model_v4 ABC transporter domain-containing protein 0.9802 344 566 GO:0005524
GO:0016887
GO:0034040
AF-A0A7K2KR16-F1-model_v4 ATP-binding cassette domain-containing protein 0.9799 325 568 GO:0005524
GO:0016887
GO:0034040
AF-A0A847KX24-F1-model_v4 deleted 0.9747 354 568

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pLDDT pTM Quality
83.09 0.76 High
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Predicted Structure (AlphaFold2)

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