F320867

General Info

Members Datasets Scaffolds Average Seq Length
210 177 420 275

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0017874|Ga0501034_0017874_3464_4456
Length 330
Sequence MYDGATRSFPQIATQWRNAVRRAGIPASAVASARKRTGSRACWSRLGRVGPGTLRPVRSKDYGDDVLAGDWRRPRKGRIPEIAAEPGLVAEDPSSGFCGAVVACAKDAVTLEDRFGKRRVFPLAKAGFLIDGKPVTLVRPTSAPGRALSASGSIAVRDLRARVARESRIYVEGRHDAELVEKIWGHDLRVEGVVVEYLEGVDHLPQIAEEFGPGPGRRLGVLVDHLVAGSKESRIAEQVASPYVLVTGHPFIDVWQAVKPATLGIRAWPDVPRGVPWKEGVISALGWKGEPGEVWQTILGRVRTYTDLEPALLGRVEELIDFVTDPPADG

Samples

Sample ID Description Type Environment
1 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
32 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
45 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
46 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
47 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
48 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
51 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
54 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
58 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
59 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
70 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
71 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
76 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
77 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
82 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
83 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
84 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
88 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
89 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
90 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
91 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
92 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
93 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
96 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
97 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
98 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
116 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
117 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
118 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
119 2506783011 Frankia datiscae Dg1 Isolate Nodule
120 2508501039 Frankia saprophytica CN3 Isolate Nodule
121 2527291627 Frankia casuarinae Thr Isolate Nodule
122 2527291629 Frankia sp. BMG5.23 Isolate Nodule
123 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
124 2547132424 Nocardia nova SH22a Isolate Unclassified
125 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
126 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
127 2558860280 Kutzneria sp. 744 Isolate Unclassified
128 2576861822 Frankia sp. CeD Isolate Nodule
129 2582580736 Prauserella sp. Am3 Isolate Unclassified
130 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
131 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
132 2671180195 Frankia sp. CcI49 Isolate Nodule
133 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
134 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
135 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
136 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
137 2684623036 Frankia sp. CgIM4 Isolate Nodule
138 2687453737 Frankia sp. BMG5.36 Isolate Nodule
139 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
140 2710264753 Frankia sp. KB5 Isolate Nodule
141 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
142 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
143 2773857922 Frankia sp. CcI49 Isolate Nodule
144 2773857924 Frankia sp. CgIS1 Isolate Nodule
145 2773857933 Frankia sp. BMG5.30 Isolate Nodule
146 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
147 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
148 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
149 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
150 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
151 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
152 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
153 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
154 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
155 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
156 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
157 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
158 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
159 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
160 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
161 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
162 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
163 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
164 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
165 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
166 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
167 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
168 637000116 Frankia casuarinae CcI3 Isolate Nodule
169 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
170 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
171 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
172 8054920844 Frankia tisae Agncl-8 Isolate Nodule
173 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
174 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule
175 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
176 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
177 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.48
Metatranscriptomes 1.43
Isolates 28.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.38
Nodule 8.57
Rhizoplane 0.95
Rhizosphere 64.29
Stem 0
Stem Tuber 0.48
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501034_0017874 3300049571 Bacteria 7272
2 JGI25406J46586_10006571 3300003203 Bacteria 5347
3 Ga0006562J51391_1101134 3300003578 Bacteria 4270
4 Ga0070676_10142774 3300005328 Bacteria 1526
5 Ga0070683_100260606 3300005329 Bacteria 1649
6 Ga0070682_100285834 3300005337 Bacteria 1204
7 Ga0070674_100012326 3300005356 Bacteria 5248
8 Ga0070714_100082371 3300005435 Bacteria 2803
9 Ga0070663_100000995 3300005455 Bacteria 15441
10 Ga0068857_100629558 3300005577 Bacteria 1015
11 Ga0068859_100000042 3300005617 Bacteria 158982
12 Ga0068858_100000036 3300005842 Bacteria 138467
13 Ga0068858_100066246 3300005842 Bacteria 3343
14 Ga0068860_100184230 3300005843 Bacteria 2019
15 Ga0068862_100002638 3300005844 Bacteria 15790
16 Ga0081540_1001874 3300005983 Bacteria 17612
17 Ga0081539_10000146 3300005985 Bacteria 164571
18 Ga0070717_10051760 3300006028 Bacteria 3381
19 Ga0075429_100003480 3300006880 Bacteria 13431
20 Ga0097620_100000042 3300006931 Bacteria 158982
21 Ga0105247_10014297 3300009101 Bacteria 4764
22 Ga0114129_10007471 3300009147 Bacteria 15570
23 Ga0105248_10000153 3300009177 Bacteria 80607
24 Ga0105238_10008042 3300009551 Bacteria 10549
25 Ga0105249_10665300 3300009553 Bacteria 1100
26 Ga0157369_10021881 3300013105 Bacteria 7147
27 Ga0157375_10355091 3300013308 Bacteria 1632
28 Ga0163163_10009050 3300014325 Bacteria 8873
29 Ga0163163_10396530 3300014325 Bacteria 1438
30 Ga0157379_10003985 3300014968 Bacteria 12584
31 Ga0157379_10251254 3300014968 Bacteria 1605
32 Ga0206356_11713277 3300020070 Bacteria 2118
33 Ga0206353_11498626 3300020082 Bacteria 1664
34 Ga0213875_10000749 3300021388 Bacteria 24527
35 Ga0213875_10002276 3300021388 Bacteria 11638
36 Ga0207710_10000012 3300025900 Bacteria 409603
37 Ga0207680_10163629 3300025903 Bacteria 1494
38 Ga0207664_10036199 3300025929 Bacteria 3814
39 Ga0207664_10049474 3300025929 Bacteria 3309
40 Ga0207711_10000923 3300025941 Bacteria 28332
41 Ga0207661_10271715 3300025944 Bacteria 1513
42 Ga0207679_10119313 3300025945 Bacteria 2097
43 Ga0207668_10029277 3300025972 Bacteria 3608
44 Ga0207668_10188217 3300025972 Bacteria 1634
45 Ga0207703_10000063 3300026035 Bacteria 127040
46 Ga0207703_10041037 3300026035 Bacteria 3706
47 Ga0207678_10000091 3300026067 Bacteria 75052
48 Ga0207674_10016929 3300026116 Bacteria 7962
49 Ga0268265_10000066 3300028380 Bacteria 142517
50 Ga0268264_10222570 3300028381 Bacteria 1738
51 Ga0307515_10098721 3300028794 Bacteria 3553
52 Ga0307511_10000212 3300030521 Bacteria 59189
53 Ga0307511_10144114 3300030521 Bacteria 1389
54 Ga0307513_10001050 3300031456 Bacteria 40130
55 Ga0307513_10082791 3300031456 Bacteria 3302
56 Ga0307513_10233016 3300031456 Bacteria 1653
57 Ga0307509_10235535 3300031507 Bacteria 1629
58 Ga0307514_10015731 3300031649 Bacteria 6235
59 Ga0316576_10000270 3300031727 Bacteria 22702
60 Ga0307516_10011069 3300031730 Bacteria 9850
61 Ga0307518_10000093 3300031838 Bacteria 61707
62 Ga0307415_100069217 3300032126 Bacteria 2474
63 Ga0307507_10043437 3300033179 Bacteria 4460
64 Ga0307510_10034923 3300033180 Bacteria 5621
65 Ga0307510_10067188 3300033180 Bacteria 3611
66 Ga0436364_0784617 3300037853 Bacteria 18688
67 Ga0436364_1414563 3300037853 Bacteria 43144
68 Ga0436365_0688244 3300039437 Bacteria 3630
69 Ga0451853_1741432 3300041512 Bacteria 4370
70 Ga0466972_0002691 3300044658 Bacteria 8804
71 Ga0466965_0005184 3300044683 Bacteria 5853
72 Ga0466961_0005456 3300044693 Bacteria 8021
73 Ga0466961_0074875 3300044693 Bacteria 2147
74 Ga0466963_0000634 3300044694 Bacteria 16880
75 Ga0466963_0197620 3300044694 Bacteria 1406
76 Ga0466964_0272546 3300044706 Bacteria 843
77 Ga0466957_0013847 3300044842 Bacteria 4688
78 Ga0466957_0114224 3300044842 Bacteria 1715
79 Ga0466960_0000811 3300044901 Bacteria 10986
80 Ga0466960_0095871 3300044901 Bacteria 1520
81 Ga0466959_0244870 3300045049 Bacteria 1237
82 Ga0466967_0024378 3300045976 Bacteria 4973
83 Ga0466967_0091373 3300045976 Bacteria 2767
84 Ga0466967_0144106 3300045976 Bacteria 2221
85 Ga0466967_0275306 3300045976 Bacteria 1614
86 Ga0466967_0373074 3300045976 Bacteria 1384
87 Ga0466967_0393654 3300045976 Bacteria 1347
88 Ga0495592_0007400 3300046454 Bacteria 8219
89 Ga0495603_0017762 3300046455 Bacteria 4305
90 Ga0495651_0002377 3300046462 Bacteria 14533
91 Ga0495662_0000485 3300046476 Bacteria 18097
92 Ga0495664_0000288 3300046477 Bacteria 24112
93 Ga0495594_0006100 3300046499 Bacteria 6196
94 Ga0495594_0027671 3300046499 Bacteria 3056
95 Ga0495607_0039673 3300046501 Bacteria 2811
96 Ga0495628_0346638 3300046516 Bacteria 1092
97 Ga0495652_0015723 3300046529 Bacteria 6773
98 Ga0495586_0018451 3300046535 Bacteria 3715
99 Ga0495587_0084384 3300046536 Bacteria 1839
100 Ga0495645_0089728 3300046543 Bacteria 2198
101 Ga0495667_0227690 3300046559 Bacteria 1189
102 Ga0495634_0008018 3300046642 Bacteria 7881
103 Ga0495635_0000648 3300046663 Bacteria 22367
104 Ga0495657_0001640 3300046675 Bacteria 19226
105 Ga0495657_0005579 3300046675 Bacteria 9929
106 Ga0495646_0000297 3300046680 Bacteria 25413
107 Ga0495670_0128652 3300046691 Bacteria 1319
108 Ga0495581_0001876 3300047315 Bacteria 11760
109 Ga0495604_0000521 3300047317 Bacteria 33874
110 Ga0495676_0000404 3300047321 Bacteria 35030
111 Ga0495676_0054754 3300047321 Bacteria 3168
112 Ga0495675_0008998 3300047444 Bacteria 6208
113 Ga0495685_029457 3300047447 Bacteria 1887
114 Ga0495684_0045669 3300047471 Bacteria 3352
115 Ga0495593_0009857 3300047673 Bacteria 5543
116 Ga0495602_0030363 3300048088 Bacteria 5127
117 Ga0495614_0044156 3300048089 Bacteria 1911
118 Ga0495614_0059573 3300048089 Bacteria 1640
119 Ga0496114_0072742 3300048917 Bacteria 2892
120 Ga0496117_0048725 3300048920 Bacteria 3022
121 Ga0496119_0006203 3300048922 Bacteria 11178
122 Ga0496121_0007625 3300048924 Bacteria 13014
123 Ga0496121_0026063 3300048924 Bacteria 5526
124 Ga0496126_0000006 3300048929 Bacteria 798804
125 Ga0496126_0000036 3300048929 Bacteria 354901
126 Ga0501031_0060985 3300049568 Bacteria 2458
127 Ga0501036_0014548 3300049572 Bacteria 6552
128 Ga0501037_0036970 3300049573 Bacteria 3598
129 Ga0501037_0148496 3300049573 Bacteria 1676
130 Ga0501038_0006233 3300049574 Bacteria 11026
131 Ga0501038_0114319 3300049574 Bacteria 2232
132 Ga0501039_0032270 3300049575 Bacteria 4038
133 Ga0501042_0002406 3300049578 Bacteria 11471
134 Ga0501043_0003010 3300049579 Bacteria 14023
135 Ga0501043_0047371 3300049579 Bacteria 3380
136 Ga0501046_0223784 3300049580 Bacteria 1392
137 Ga0501047_0013622 3300049581 Bacteria 7714
138 Ga0501047_0110962 3300049581 Bacteria 2625
139 Ga0501048_0007810 3300049582 Bacteria 8106
140 Ga0501069_0028640 3300049585 Bacteria 3055
141 Ga0501073_0018739 3300049589 Bacteria 5004
142 Ga0501074_0007372 3300049590 Bacteria 7953
143 Ga0501074_0048706 3300049590 Bacteria 3061
144 Ga0501044_0021411 3300049823 Bacteria 6897
145 Ga0501044_0054562 3300049823 Bacteria 4107
146 nmdc:mga0yw44_348341_c1 3300050492 Bacteria 997
147 nmdc:mga05p37_61845_c1 3300050507 Bacteria 4609
148 Ga0500647_0108860 3300053091 Bacteria 1319
149 Ga0500572_008365 3300053111 Bacteria 2416
150 Ga0500568_0003809 3300053139 Bacteria 8241
151 Ga0500573_0076785 3300053140 Bacteria 1901
152 2506867124 2506783011 Bacteria 5323186
153 2508675814 2508501039 Bacteria 9978592
154 2528203170 2527291627 Bacteria 5309833
155 2528213017 2527291629 Bacteria 5267418
156 2546949233 2546825537 Bacteria 5389291
157 2548696378 2547132424 Bacteria 8348532
158 2552108728 2551306166 Bacteria 9731570
159 2558908522 2558860112 Bacteria 9931328
160 2559422505 2558860280 Bacteria 11429938
161 2579748063 2576861822 Bacteria 5004595
162 2583149960 2582580736 Bacteria 5325865
163 2643944731 2643221587 Bacteria 7586415
164 2644431629 2643221677 Bacteria 7584031
165 2671832878 2671180195 Bacteria 9757215
166 2676200926 2675902999 Bacteria 9438463
167 2676485299 2675903059 Bacteria 8644972
168 2676491730 2675903060 Bacteria 10051191
169 2686536010 2684623035 Bacteria 8032739
170 2686544943 2684623036 Bacteria 5199090
171 2689962706 2687453737 Bacteria 11203906
172 2689991140 2687453743 Bacteria 8361025
173 2710605432 2710264753 Bacteria 5455564
174 2753073142 2751185734 Bacteria 8863695
175 2774845504 2773857921 Bacteria 9435764
176 2774851034 2773857922 Bacteria 9757215
177 2774863498 2773857924 Bacteria 5256821
178 2774903891 2773857933 Bacteria 5818019
179 2776374525 2775506925 Bacteria 7237746
180 2791914742 2791354901 Bacteria 8322202
181 2808841214 2808606359 Bacteria 9866990
182 2816510336 2816332139 Bacteria 9138787
183 2837271165 2837268691 Bacteria 7850704
184 2842891898 2842888712 Bacteria 4279094
185 2862182542 2862178590 Bacteria 8583590
186 2863073752 2863067949 Bacteria 8541735
187 2866554055 2866552031 Bacteria 5824618
188 2866614954 2866612099 Bacteria 7543886
189 2868091317 2868088558 Bacteria 7609351
190 2870723812 2870721527 Bacteria 9689237
191 2870785343 2870782633 Bacteria 9624083
192 2891330785 2891326441 Bacteria 6439512
193 2895887210 2895880812 Bacteria 11255272
194 2897563566 2897561785 Bacteria 3256946
195 2899366596 2899359706 Bacteria 10940472
196 2899372056 2899370129 Bacteria 6781179
197 2917736707 2917736166 Bacteria 9690793
198 2919468615 2919468124 Bacteria 9133025
199 2919713752 2919713450 Bacteria 7431245
200 2932399087 2932398195 Bacteria 3847976
201 637878689 637000116 Bacteria 5433628
202 8003320008 8003314358 Bacteria 10575343
203 8047715890 8047710418 Bacteria 11023148
204 8054474031 8054472261 Bacteria 7464355
205 8054921280 8054920844 Bacteria 7068637
206 8055067116 8055066027 Bacteria 9479577
207 8055160177 8055157932 Bacteria 6429399
208 8055174154 8055172936 Bacteria 9305943
209 8056064812 8056060235 Bacteria 7259403
210 8056214671 8056207758 Bacteria 8639239
211 Ga0501034_0017874
212 JGI25406J46586_10006571
213 Ga0006562J51391_1101134
214 Ga0070676_10142774
215 Ga0070683_100260606
216 Ga0070682_100285834
217 Ga0070674_100012326
218 Ga0070714_100082371
219 Ga0070663_100000995
220 Ga0068857_100629558
221 Ga0068859_100000042
222 Ga0068858_100000036
223 Ga0068858_100066246
224 Ga0068860_100184230
225 Ga0068862_100002638
226 Ga0081540_1001874
227 Ga0081539_10000146
228 Ga0070717_10051760
229 Ga0075429_100003480
230 Ga0097620_100000042
231 Ga0105247_10014297
232 Ga0114129_10007471
233 Ga0105248_10000153
234 Ga0105238_10008042
235 Ga0105249_10665300
236 Ga0157369_10021881
237 Ga0157375_10355091
238 Ga0163163_10009050
239 Ga0163163_10396530
240 Ga0157379_10003985
241 Ga0157379_10251254
242 Ga0206356_11713277
243 Ga0206353_11498626
244 Ga0213875_10000749
245 Ga0213875_10002276
246 Ga0207710_10000012
247 Ga0207680_10163629
248 Ga0207664_10036199
249 Ga0207664_10049474
250 Ga0207711_10000923
251 Ga0207661_10271715
252 Ga0207679_10119313
253 Ga0207668_10029277
254 Ga0207668_10188217
255 Ga0207703_10000063
256 Ga0207703_10041037
257 Ga0207678_10000091
258 Ga0207674_10016929
259 Ga0268265_10000066
260 Ga0268264_10222570
261 Ga0307515_10098721
262 Ga0307511_10000212
263 Ga0307511_10144114
264 Ga0307513_10001050
265 Ga0307513_10082791
266 Ga0307513_10233016
267 Ga0307509_10235535
268 Ga0307514_10015731
269 Ga0316576_10000270
270 Ga0307516_10011069
271 Ga0307518_10000093
272 Ga0307415_100069217
273 Ga0307507_10043437
274 Ga0307510_10034923
275 Ga0307510_10067188
276 Ga0436364_0784617
277 Ga0436364_1414563
278 Ga0436365_0688244
279 Ga0451853_1741432
280 Ga0466972_0002691
281 Ga0466965_0005184
282 Ga0466961_0005456
283 Ga0466961_0074875
284 Ga0466963_0000634
285 Ga0466963_0197620
286 Ga0466964_0272546
287 Ga0466957_0013847
288 Ga0466957_0114224
289 Ga0466960_0000811
290 Ga0466960_0095871
291 Ga0466959_0244870
292 Ga0466967_0024378
293 Ga0466967_0091373
294 Ga0466967_0144106
295 Ga0466967_0275306
296 Ga0466967_0373074
297 Ga0466967_0393654
298 Ga0495592_0007400
299 Ga0495603_0017762
300 Ga0495651_0002377
301 Ga0495662_0000485
302 Ga0495664_0000288
303 Ga0495594_0006100
304 Ga0495594_0027671
305 Ga0495607_0039673
306 Ga0495628_0346638
307 Ga0495652_0015723
308 Ga0495586_0018451
309 Ga0495587_0084384
310 Ga0495645_0089728
311 Ga0495667_0227690
312 Ga0495634_0008018
313 Ga0495635_0000648
314 Ga0495657_0001640
315 Ga0495657_0005579
316 Ga0495646_0000297
317 Ga0495670_0128652
318 Ga0495581_0001876
319 Ga0495604_0000521
320 Ga0495676_0000404
321 Ga0495676_0054754
322 Ga0495675_0008998
323 Ga0495685_029457
324 Ga0495684_0045669
325 Ga0495593_0009857
326 Ga0495602_0030363
327 Ga0495614_0044156
328 Ga0495614_0059573
329 Ga0496114_0072742
330 Ga0496117_0048725
331 Ga0496119_0006203
332 Ga0496121_0007625
333 Ga0496121_0026063
334 Ga0496126_0000006
335 Ga0496126_0000036
336 Ga0501031_0060985
337 Ga0501036_0014548
338 Ga0501037_0036970
339 Ga0501037_0148496
340 Ga0501038_0006233
341 Ga0501038_0114319
342 Ga0501039_0032270
343 Ga0501042_0002406
344 Ga0501043_0003010
345 Ga0501043_0047371
346 Ga0501046_0223784
347 Ga0501047_0013622
348 Ga0501047_0110962
349 Ga0501048_0007810
350 Ga0501069_0028640
351 Ga0501073_0018739
352 Ga0501074_0007372
353 Ga0501074_0048706
354 Ga0501044_0021411
355 Ga0501044_0054562
356 nmdc:mga0yw44_348341_c1
357 nmdc:mga05p37_61845_c1
358 Ga0500647_0108860
359 Ga0500572_008365
360 Ga0500568_0003809
361 Ga0500573_0076785
362 2506867124
363 2508675814
364 2528203170
365 2528213017
366 2546949233
367 2548696378
368 2552108728
369 2558908522
370 2559422505
371 2579748063
372 2583149960
373 2643944731
374 2644431629
375 2671832878
376 2676200926
377 2676485299
378 2676491730
379 2686536010
380 2686544943
381 2689962706
382 2689991140
383 2710605432
384 2753073142
385 2774845504
386 2774851034
387 2774863498
388 2774903891
389 2776374525
390 2791914742
391 2808841214
392 2816510336
393 2837271165
394 2842891898
395 2862182542
396 2863073752
397 2866554055
398 2866614954
399 2868091317
400 2870723812
401 2870785343
402 2891330785
403 2895887210
404 2897563566
405 2899366596
406 2899372056
407 2917736707
408 2919468615
409 2919713752
410 2932399087
411 637878689
412 8003320008
413 8047715890
414 8054474031
415 8054921280
416 8055067116
417 8055160177
418 8055174154
419 8056064812
420 8056214671

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11296

DUF3097_C

DUF3097, C-terminal domain

167

325

0.99

PF22845

DUF3097_N

DUF3097, N-terminal domain

81

140

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7a46-assembly1.cif.gz_A small conductance mechanosensitive channel ybio 0.8374 27 64
7ux1-assembly1.cif.gz_A ecmsck in an open conformation 0.8241 27 64
7dlu-assembly1.cif.gz_A mechanosensitive channel mscs k180r mutant 0.8215 27 64
8ddj-assembly1.cif.gz_A open mscs in pc14.1 nanodiscs 0.8214 27 64
5aji-assembly1.cif.gz_E mscs d67r1 high resolution 0.8198 27 64
ID Description Score Start End Superfamily
af_P75783_574_621_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.8532 27 64 2.30.30.60
af_P77338_945_994_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.8286 26 64 2.30.30.60
af_P0C0S1_129_178_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.8194 27 64 2.30.30.60
af_Q58543_201_249_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.814 27 64 2.30.30.60
af_A0A0R0ELK1_770_819_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.8114 27 64 2.30.30.60
ID Description Score Start End GO Terms
AF-A0A4Q3IQT2-F1-model_v4 deleted 0.9489 124 268
AF-A0A6J6IBJ3-F1-model_v4 Unannotated protein 0.9448 107 267
AF-E7NC91-F1-model_v4 DUF3097 domain-containing protein 0.9434 111 268
AF-W4UEF2-F1-model_v4 deleted 0.9288 142 267
AF-A0A6J6IBJ3-F1-model_v4 Unannotated protein 0.9229 107 267

Map