F320363

General Info

Members Datasets Scaffolds Average Seq Length
210 129 420 157

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10258006|Ga0157372_102580062
Length 179
Sequence LDKLRTFNPKKLLNYNKTTPDIMSSEHKIIIAEIVKLLRGGSAHISLKDALKGLPTYARGDKPDKLPYSIWQLVEHIRIAQWDMLQFCLGADHQSPKWPDEYWPRETAPADDAAWEASLKKIDDDLEQFIRLFQEGDIYKQIPHGNGQSILREALQIADHTAYHISEIVVIRRLQGNYR

Samples

Sample ID Description Type Environment
1 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
100 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
110 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
111 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
117 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
120 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
123 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
124 2738541302 Pedobacter sp. CF074 Isolate Unclassified
125 2738543023 Pedobacter sp. OK628 Isolate Unclassified
126 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
127 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
128 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
129 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.14
Metatranscriptomes 0
Isolates 2.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.76
Nodule 0
Rhizoplane 0
Rhizosphere 90
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157372_10258006 3300013307 Bacteria 2024
2 JGI24736J21556_1007228 3300001904 Bacteria 1867
3 JGI24737J22298_10000840 3300001990 Bacteria 10935
4 JGI24735J21928_10006933 3300002067 Bacteria 3708
5 rootH2_10166108 3300003320 Bacteria 1495
6 rootH2_10245363 3300003320 Bacteria 1757
7 rootH1_10008848 3300003323 Bacteria 6906
8 rootH1_10039624 3300003323 Bacteria 15166
9 rootH1_10060376 3300003323 Bacteria 6421
10 rootH1_10193489 3300003323 Bacteria 1625
11 Ga0065714_10064487 3300005288 Bacteria 50955
12 Ga0065714_10074229 3300005288 Bacteria 3067
13 Ga0065714_10148443 3300005288 Bacteria 1122
14 Ga0070658_10104694 3300005327 Unclassified 2341
15 Ga0070658_10778287 3300005327 Bacteria 831
16 Ga0070680_100014497 3300005336 Bacteria 6167
17 Ga0068868_100019110 3300005338 Bacteria 5132
18 Ga0070660_100064339 3300005339 Bacteria 2853
19 Ga0070674_100041625 3300005356 Bacteria 3115
20 Ga0070673_100216014 3300005364 Unclassified 1658
21 Ga0070659_100005922 3300005366 Bacteria 8813
22 Ga0070659_100082438 3300005366 Bacteria 2569
23 Ga0070678_100006373 3300005456 Bacteria 6924
24 Ga0070662_100000877 3300005457 Bacteria 18384
25 Ga0070662_100134950 3300005457 Bacteria 1907
26 Ga0070681_10080189 3300005458 Bacteria 3220
27 Ga0068867_100000040 3300005459 Bacteria 78509
28 Ga0070679_100030569 3300005530 Bacteria 5316
29 Ga0068853_100028928 3300005539 Bacteria 4665
30 Ga0070672_100139111 3300005543 Unclassified 2001
31 Ga0070665_100000010 3300005548 Bacteria 529545
32 Ga0070665_100002844 3300005548 Bacteria 18745
33 Ga0068855_100016168 3300005563 Bacteria 8971
34 Ga0068855_100149117 3300005563 Bacteria 2660
35 Ga0068855_100719570 3300005563 Bacteria 1067
36 Ga0068857_100140064 3300005577 Bacteria 2186
37 Ga0068854_100025355 3300005578 Bacteria 4068
38 Ga0068854_100173296 3300005578 Bacteria 1680
39 Ga0068856_100005806 3300005614 Bacteria 12161
40 Ga0068856_100160533 3300005614 Bacteria 2258
41 Ga0068856_101091865 3300005614 Bacteria 815
42 Ga0068856_102204495 3300005614 Unclassified 560
43 Ga0068856_102371149 3300005614 Bacteria 538
44 Ga0068852_100002492 3300005616 Bacteria 12686
45 Ga0068852_100092539 3300005616 Bacteria 2708
46 Ga0068852_100536956 3300005616 Bacteria 1168
47 Ga0068866_10039990 3300005718 Bacteria 2319
48 Ga0068870_10171247 3300005840 Bacteria 1296
49 Ga0068858_100548358 3300005842 Unclassified 1119
50 Ga0075366_10156655 3300006195 Bacteria 1380
51 Ga0097621_100000011 3300006237 Bacteria 111116
52 Ga0068871_100003357 3300006358 Bacteria 10999
53 Ga0068865_100001113 3300006881 Bacteria 15548
54 Ga0105240_10003887 3300009093 Bacteria 23076
55 Ga0105240_10014946 3300009093 Bacteria 10575
56 Ga0105240_10136988 3300009093 Bacteria 2931
57 Ga0105240_10141423 3300009093 Bacteria 2877
58 Ga0105240_10143270 3300009093 Bacteria 2855
59 Ga0105240_10195466 3300009093 Bacteria 2376
60 Ga0105240_10210982 3300009093 Bacteria 2269
61 Ga0105240_10229352 3300009093 Bacteria 2159
62 Ga0105240_10728260 3300009093 Bacteria 1080
63 Ga0105245_10805560 3300009098 Bacteria 977
64 Ga0105241_10001407 3300009174 Bacteria 18416
65 Ga0105241_10002980 3300009174 Bacteria 12633
66 Ga0105241_10470186 3300009174 Unclassified 1116
67 Ga0105237_10001316 3300009545 Bacteria 32951
68 Ga0105237_10004319 3300009545 Bacteria 16482
69 Ga0105238_10003247 3300009551 Bacteria 16233
70 Ga0105238_10509003 3300009551 Bacteria 1206
71 Ga0105238_10724007 3300009551 Bacteria 1008
72 Ga0105239_10014380 3300010375 Bacteria 8781
73 Ga0105239_10037432 3300010375 Bacteria 5319
74 Ga0105246_10002620 3300011119 Bacteria 10886
75 Ga0157373_10034787 3300013100 Bacteria 3619
76 Ga0157371_10000009 3300013102 Bacteria 392895
77 Ga0157371_10001995 3300013102 Bacteria 20204
78 Ga0157371_10056724 3300013102 Bacteria 2778
79 Ga0157369_10000006 3300013105 Bacteria 412230
80 Ga0157369_10098318 3300013105 Bacteria 3122
81 Ga0157369_10401240 3300013105 Bacteria 1422
82 Ga0157374_10000391 3300013296 Bacteria 40035
83 Ga0157374_10001058 3300013296 Bacteria 23891
84 Ga0157374_11026409 3300013296 Bacteria 844
85 Ga0157374_11107543 3300013296 Bacteria 812
86 Ga0157378_10012884 3300013297 Bacteria 7322
87 Ga0163162_10000082 3300013306 Bacteria 86888
88 Ga0157372_10001395 3300013307 Bacteria 26028
89 Ga0157372_10039487 3300013307 Bacteria 5210
90 Ga0157375_10004634 3300013308 Bacteria 11947
91 Ga0157375_10135979 3300013308 Unclassified 2581
92 Ga0157377_10260808 3300014745 Bacteria 1127
93 Ga0157379_10119019 3300014968 Bacteria 2376
94 Ga0157376_10200496 3300014969 Unclassified 1836
95 Ga0182006_1000238 3300015261 Bacteria 51972
96 Ga0182006_1226972 3300015261 Bacteria 615
97 Ga0182007_10000001 3300015262 Bacteria 1127301
98 Ga0163161_10000089 3300017792 Bacteria 91093
99 Ga0163161_10000124 3300017792 Bacteria 72378
100 Ga0163161_10057117 3300017792 Bacteria 2836
101 Ga0213872_10050586 3300021361 Unclassified 1886
102 Ga0207427_110751 3300025231 Bacteria 945
103 Ga0209148_1030293 3300025254 Bacteria 811
104 Ga0209233_1030790 3300025261 Bacteria 1261
105 Ga0209455_1009429 3300025272 Bacteria 2566
106 Ga0207642_10106184 3300025899 Bacteria 1421
107 Ga0207647_10000046 3300025904 Bacteria 90148
108 Ga0207647_10000171 3300025904 Bacteria 51875
109 Ga0207647_10033792 3300025904 Bacteria 3270
110 Ga0207647_10045404 3300025904 Bacteria 2741
111 Ga0207643_10256924 3300025908 Bacteria 1078
112 Ga0207705_10133229 3300025909 Bacteria 1851
113 Ga0207705_10311349 3300025909 Bacteria 1209
114 Ga0207705_10470794 3300025909 Unclassified 975
115 Ga0207654_10004978 3300025911 Bacteria 6717
116 Ga0207654_10013422 3300025911 Bacteria 4215
117 Ga0207695_10006908 3300025913 Bacteria 14597
118 Ga0207695_10015488 3300025913 Bacteria 8973
119 Ga0207695_10021187 3300025913 Bacteria 7423
120 Ga0207695_10071092 3300025913 Bacteria 3554
121 Ga0207695_10223747 3300025913 Bacteria 1788
122 Ga0207695_10242737 3300025913 Unclassified 1702
123 Ga0207695_10317484 3300025913 Bacteria 1448
124 Ga0207671_10003218 3300025914 Bacteria 16429
125 Ga0207671_10034413 3300025914 Bacteria 3763
126 Ga0207660_10021301 3300025917 Bacteria 4359
127 Ga0207657_10383503 3300025919 Bacteria 1106
128 Ga0207652_10038674 3300025921 Bacteria 4046
129 Ga0207694_10027732 3300025924 Bacteria 4314
130 Ga0207687_10679586 3300025927 Bacteria 872
131 Ga0207644_10022000 3300025931 Bacteria 4350
132 Ga0207690_10032748 3300025932 Bacteria 3337
133 Ga0207706_10001858 3300025933 Bacteria 20682
134 Ga0207706_10238955 3300025933 Bacteria 1588
135 Ga0207669_10053140 3300025937 Bacteria 2438
136 Ga0207704_10000169 3300025938 Bacteria 34738
137 Ga0207691_10046119 3300025940 Unclassified 4007
138 Ga0207689_10425594 3300025942 Bacteria 1108
139 Ga0207667_10000015 3300025949 Bacteria 417534
140 Ga0207667_10020179 3300025949 Bacteria 7418
141 Ga0207667_10192707 3300025949 Bacteria 2091
142 Ga0207651_10012138 3300025960 Bacteria 4859
143 Ga0207651_10236363 3300025960 Unclassified 1487
144 Ga0207640_10021509 3300025981 Bacteria 3846
145 Ga0207677_10004045 3300026023 Bacteria 7830
146 Ga0207677_10109898 3300026023 Bacteria 2051
147 Ga0207703_10290877 3300026035 Bacteria 1487
148 Ga0207639_10033498 3300026041 Bacteria 3790
149 Ga0207639_10045633 3300026041 Bacteria 3302
150 Ga0207702_10000314 3300026078 Bacteria 55437
151 Ga0207702_10041816 3300026078 Bacteria 3843
152 Ga0207702_10170333 3300026078 Bacteria 1996
153 Ga0207702_11034900 3300026078 Bacteria 815
154 Ga0207702_12360982 3300026078 Bacteria 519
155 Ga0207648_10000220 3300026089 Bacteria 61703
156 Ga0207674_10156949 3300026116 Bacteria 2230
157 Ga0207683_10013580 3300026121 Bacteria 6947
158 Ga0207698_10006185 3300026142 Bacteria 7452
159 Ga0207698_10128748 3300026142 Bacteria 2159
160 Ga0207698_11033696 3300026142 Bacteria 833
161 Ga0207698_11601805 3300026142 Bacteria 667
162 Ga0268266_10000032 3300028379 Bacteria 395079
163 Ga0307517_10000429 3300028786 Bacteria 72171
164 Ga0265338_10452128 3300028800 Unclassified 909
165 Ga0307509_10601572 3300031507 Bacteria 772
166 Ga0307405_10000018 3300031731 Bacteria 182495
167 Ga0307407_10000015 3300031903 Bacteria 143258
168 Ga0307409_100491298 3300031995 Bacteria 1193
169 Ga0307416_100000025 3300032002 Bacteria 178154
170 Ga0307414_10222255 3300032004 Bacteria 1551
171 Ga0307510_10071972 3300033180 Bacteria 3438
172 Ga0373941_0008751 3300035115 Bacteria 2527
173 Ga0395899_0000034 3300037312 Bacteria 302623
174 Ga0395899_0005094 3300037312 Bacteria 10230
175 Ga0395899_0022594 3300037312 Bacteria 4765
176 Ga0395899_0457458 3300037312 Bacteria 835
177 Ga0395900_0000194 3300037418 Bacteria 97768
178 Ga0395900_0044730 3300037418 Bacteria 4561
179 Ga0395900_0170989 3300037418 Bacteria 2212
180 Ga0395898_0024229 3300037466 Bacteria 6122
181 Ga0395905_0000355 3300037471 Bacteria 65176
182 Ga0395905_0069405 3300037471 Bacteria 3301
183 Ga0395901_0005763 3300038443 Bacteria 12548
184 Ga0395901_0058436 3300038443 Bacteria 4011
185 Ga0436361_0695997 3300039447 Bacteria 18464
186 Ga0495650_0145474 3300046471 Bacteria 855
187 Ga0495606_0022030 3300046507 Bacteria 4656
188 Ga0495608_0497271 3300046511 Bacteria 739
189 Ga0495610_0004491 3300046512 Bacteria 10290
190 Ga0495631_0017361 3300046518 Bacteria 3406
191 Ga0495652_0115562 3300046529 Bacteria 2150
192 Ga0495668_0000041 3300046616 Bacteria 229462
193 Ga0495661_0000555 3300046665 Bacteria 38650
194 Ga0495661_0163636 3300046665 Bacteria 1192
195 Ga0495658_0254348 3300046683 Bacteria 1105
196 Ga0495683_0144706 3300047323 Bacteria 1111
197 Ga0495687_001143 3300047443 Bacteria 25711
198 Ga0495686_0002322 3300047472 Bacteria 18183
199 Ga0495614_0013510 3300048089 Bacteria 3580
200 nmdc:mga00v17_153036_c1 3300050491 Bacteria 1482
201 nmdc:mga0k408_319562_c1 3300050493 Unclassified 926
202 nmdc:mga0k408_69579_c1 3300050493 Bacteria 2054
203 Ga0500635_0004232 3300053080 Bacteria 3681
204 Ga0500619_284607 3300053154 Bacteria 537
205 2738853982 2738541302 Bacteria 5944758
206 2739300992 2738543023 Bacteria 6767879
207 2852626734 2852623160 Bacteria 4376875
208 2884934035 2884933994 Bacteria 4535041
209 2946000355 2945997725 Bacteria 6404843
210 2954017242 2954016120 Bacteria 6446024
211 Ga0157372_10258006
212 JGI24736J21556_1007228
213 JGI24737J22298_10000840
214 JGI24735J21928_10006933
215 rootH2_10166108
216 rootH2_10245363
217 rootH1_10008848
218 rootH1_10039624
219 rootH1_10060376
220 rootH1_10193489
221 Ga0065714_10064487
222 Ga0065714_10074229
223 Ga0065714_10148443
224 Ga0070658_10104694
225 Ga0070658_10778287
226 Ga0070680_100014497
227 Ga0068868_100019110
228 Ga0070660_100064339
229 Ga0070674_100041625
230 Ga0070673_100216014
231 Ga0070659_100005922
232 Ga0070659_100082438
233 Ga0070678_100006373
234 Ga0070662_100000877
235 Ga0070662_100134950
236 Ga0070681_10080189
237 Ga0068867_100000040
238 Ga0070679_100030569
239 Ga0068853_100028928
240 Ga0070672_100139111
241 Ga0070665_100000010
242 Ga0070665_100002844
243 Ga0068855_100016168
244 Ga0068855_100149117
245 Ga0068855_100719570
246 Ga0068857_100140064
247 Ga0068854_100025355
248 Ga0068854_100173296
249 Ga0068856_100005806
250 Ga0068856_100160533
251 Ga0068856_101091865
252 Ga0068856_102204495
253 Ga0068856_102371149
254 Ga0068852_100002492
255 Ga0068852_100092539
256 Ga0068852_100536956
257 Ga0068866_10039990
258 Ga0068870_10171247
259 Ga0068858_100548358
260 Ga0075366_10156655
261 Ga0097621_100000011
262 Ga0068871_100003357
263 Ga0068865_100001113
264 Ga0105240_10003887
265 Ga0105240_10014946
266 Ga0105240_10136988
267 Ga0105240_10141423
268 Ga0105240_10143270
269 Ga0105240_10195466
270 Ga0105240_10210982
271 Ga0105240_10229352
272 Ga0105240_10728260
273 Ga0105245_10805560
274 Ga0105241_10001407
275 Ga0105241_10002980
276 Ga0105241_10470186
277 Ga0105237_10001316
278 Ga0105237_10004319
279 Ga0105238_10003247
280 Ga0105238_10509003
281 Ga0105238_10724007
282 Ga0105239_10014380
283 Ga0105239_10037432
284 Ga0105246_10002620
285 Ga0157373_10034787
286 Ga0157371_10000009
287 Ga0157371_10001995
288 Ga0157371_10056724
289 Ga0157369_10000006
290 Ga0157369_10098318
291 Ga0157369_10401240
292 Ga0157374_10000391
293 Ga0157374_10001058
294 Ga0157374_11026409
295 Ga0157374_11107543
296 Ga0157378_10012884
297 Ga0163162_10000082
298 Ga0157372_10001395
299 Ga0157372_10039487
300 Ga0157375_10004634
301 Ga0157375_10135979
302 Ga0157377_10260808
303 Ga0157379_10119019
304 Ga0157376_10200496
305 Ga0182006_1000238
306 Ga0182006_1226972
307 Ga0182007_10000001
308 Ga0163161_10000089
309 Ga0163161_10000124
310 Ga0163161_10057117
311 Ga0213872_10050586
312 Ga0207427_110751
313 Ga0209148_1030293
314 Ga0209233_1030790
315 Ga0209455_1009429
316 Ga0207642_10106184
317 Ga0207647_10000046
318 Ga0207647_10000171
319 Ga0207647_10033792
320 Ga0207647_10045404
321 Ga0207643_10256924
322 Ga0207705_10133229
323 Ga0207705_10311349
324 Ga0207705_10470794
325 Ga0207654_10004978
326 Ga0207654_10013422
327 Ga0207695_10006908
328 Ga0207695_10015488
329 Ga0207695_10021187
330 Ga0207695_10071092
331 Ga0207695_10223747
332 Ga0207695_10242737
333 Ga0207695_10317484
334 Ga0207671_10003218
335 Ga0207671_10034413
336 Ga0207660_10021301
337 Ga0207657_10383503
338 Ga0207652_10038674
339 Ga0207694_10027732
340 Ga0207687_10679586
341 Ga0207644_10022000
342 Ga0207690_10032748
343 Ga0207706_10001858
344 Ga0207706_10238955
345 Ga0207669_10053140
346 Ga0207704_10000169
347 Ga0207691_10046119
348 Ga0207689_10425594
349 Ga0207667_10000015
350 Ga0207667_10020179
351 Ga0207667_10192707
352 Ga0207651_10012138
353 Ga0207651_10236363
354 Ga0207640_10021509
355 Ga0207677_10004045
356 Ga0207677_10109898
357 Ga0207703_10290877
358 Ga0207639_10033498
359 Ga0207639_10045633
360 Ga0207702_10000314
361 Ga0207702_10041816
362 Ga0207702_10170333
363 Ga0207702_11034900
364 Ga0207702_12360982
365 Ga0207648_10000220
366 Ga0207674_10156949
367 Ga0207683_10013580
368 Ga0207698_10006185
369 Ga0207698_10128748
370 Ga0207698_11033696
371 Ga0207698_11601805
372 Ga0268266_10000032
373 Ga0307517_10000429
374 Ga0265338_10452128
375 Ga0307509_10601572
376 Ga0307405_10000018
377 Ga0307407_10000015
378 Ga0307409_100491298
379 Ga0307416_100000025
380 Ga0307414_10222255
381 Ga0307510_10071972
382 Ga0373941_0008751
383 Ga0395899_0000034
384 Ga0395899_0005094
385 Ga0395899_0022594
386 Ga0395899_0457458
387 Ga0395900_0000194
388 Ga0395900_0044730
389 Ga0395900_0170989
390 Ga0395898_0024229
391 Ga0395905_0000355
392 Ga0395905_0069405
393 Ga0395901_0005763
394 Ga0395901_0058436
395 Ga0436361_0695997
396 Ga0495650_0145474
397 Ga0495606_0022030
398 Ga0495608_0497271
399 Ga0495610_0004491
400 Ga0495631_0017361
401 Ga0495652_0115562
402 Ga0495668_0000041
403 Ga0495661_0000555
404 Ga0495661_0163636
405 Ga0495658_0254348
406 Ga0495683_0144706
407 Ga0495687_001143
408 Ga0495686_0002322
409 Ga0495614_0013510
410 nmdc:mga00v17_153036_c1
411 nmdc:mga0k408_319562_c1
412 nmdc:mga0k408_69579_c1
413 Ga0500635_0004232
414 Ga0500619_284607
415 2738853982
416 2739300992
417 2852626734
418 2884934035
419 2946000355
420 2954017242

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12867

DinB_2

DinB superfamily

46

168

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ou6-assembly1.cif.gz_A-2 crystal structure of a putative metalloenzyme of the duf664 family (dr_1065) from deinococcus radiodurans at 1.80 a resolution 0.7872 9 153
2ou6-assembly1.cif.gz_A-2 crystal structure of a putative metalloenzyme of the duf664 family (dr_1065) from deinococcus radiodurans at 1.80 a resolution 0.7284 9 153
2yqy-assembly1.cif.gz_A crystal structure of tt2238, a four-helix bundle protein 0.7088 9 148
2qnl-assembly1.cif.gz_A-2 crystal structure of a putative dna damage-inducible protein (chu_0679) from cytophaga hutchinsonii atcc 33406 at 1.50 a resolution 0.6986 4 150
1rxq-assembly1.cif.gz_B yfit from bacillus subtilis is a probable metal-dependent hydrolase with an unusual four-helix bundle topology 0.6983 1 157
ID Description Score Start End Superfamily
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7053 11 149 1.20.120.450
1rxqD00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.6966 1 151 1.20.120.450
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.6875 11 149 1.20.120.450
af_O53728_4_171_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.6814 6 153 1.20.120.450
1rxqD00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.6702 1 151 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A5C1HIM2-F1-model_v4 deleted 0.9971 1 156
AF-A0A1M7NWC6-F1-model_v4 DinB superfamily protein 0.9964 4 157
AF-A0A1G7N2Y6-F1-model_v4 DinB superfamily protein 0.9908 4 157
AF-A0A5C1HIM2-F1-model_v4 deleted 0.9907 1 156
AF-A0A4Q3F385-F1-model_v4 deleted 0.9857 25 157

Map