F319864

General Info

Members Datasets Scaffolds Average Seq Length
210 159 199 376

Family's Representative Sequence

Representative Sequence 3300003771|Ga0055526_1000194|Ga0055526_100019437
Length 411
Sequence MSAFARSFRFLGAPPLGRWLASAAILAFCLLALASTGHAQSFQSQAPFAILLDSDTGAVLYEKAADELMVPASMAKLATVLVAFEEIAAGRLTLDSEIGISENAWRKGGAPSGGSTMFALLNSRIKLSDILHGVIVQSGNDAAIALAEAIAGDEQTFGRVMTERVRALGLTKSVFRNATGMADPQQRVTPRELARLADHIIKTYPELYKIFGLRDFTWNKIRQQNRNPLLTMDIGADGLKTGNIDESGFGLVGSAVQNGQRLIVVVNGLKTGRDRAAEARKLLEWGFRAFERRQLFADGETVGDASVYGGEKGRVGLRSKGAISLLLPRGSSERLAARIVYRGPLAVPVQEGAEVARLVVTRGEVKTLDVPLYAAETVREGTLQSRALDALFEATTGWVRKALSRSVSGST

Samples

Sample ID Description Type Environment
1 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
2 2643221734 Bosea sp. Root670 Isolate Unclassified
3 2643221736 Bosea sp. Root483D1 Isolate Unclassified
4 2818991467 Bosea vestrisii 3192 Isolate Unclassified
5 2841760612 Bosea sp. Tri-49 Isolate Nodule
6 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
7 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
8 2844104063 Bosea sp. Tri-39 Isolate Nodule
9 2851246043 Bosea sp. Tri-54 Isolate Nodule
10 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
11 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
19 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
20 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
89 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
96 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
97 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
98 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
99 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
100 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
101 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
111 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
112 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.76
Metatranscriptomes 0
Isolates 5.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.71
Nodule 2.38
Rhizoplane 0
Rhizosphere 88.1
Stem 0
Stem Tuber 0
Unclassified 3.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000044 3300003187 Bacteria 170418
2 Ga0055526_1000194 3300003771 Bacteria 53054
3 Ga0055526_1000319 3300003771 Bacteria 39897
4 Ga0055524_1000042 3300003775 Bacteria 155404
5 Ga0065165_1000089 3300005262 Bacteria 150859
6 Ga0070683_100045484 3300005329 Bacteria 4051
7 Ga0070690_100010838 3300005330 Bacteria 5317
8 Ga0070680_100061318 3300005336 Bacteria 3078
9 Ga0070680_100080050 3300005336 Bacteria 2694
10 Ga0070680_100096791 3300005336 Bacteria 2447
11 Ga0070691_10032352 3300005341 Bacteria 2457
12 Ga0070687_100006242 3300005343 Bacteria 4875
13 Ga0070692_10005481 3300005345 Bacteria 5420
14 Ga0070668_100003178 3300005347 Bacteria 12109
15 Ga0070669_100003861 3300005353 Bacteria 10828
16 Ga0070705_100017432 3300005440 Bacteria 3749
17 Ga0070700_100000344 3300005441 Bacteria 23968
18 Ga0070700_100074021 3300005441 Bacteria 2181
19 Ga0070681_10000399 3300005458 Bacteria 35221
20 Ga0068867_100009087 3300005459 Bacteria 7011
21 Ga0070706_100236693 3300005467 Bacteria 1705
22 Ga0070684_100013383 3300005535 Bacteria 6613
23 Ga0070697_100000648 3300005536 Bacteria 26304
24 Ga0070697_100000731 3300005536 Bacteria 24504
25 Ga0070672_100064154 3300005543 Bacteria 2901
26 Ga0070695_100000362 3300005545 Bacteria 23307
27 Ga0070696_100002485 3300005546 Bacteria 12219
28 Ga0070704_100009024 3300005549 Bacteria 6011
29 Ga0070702_100079791 3300005615 Bacteria 1957
30 Ga0068861_100003847 3300005719 Bacteria 10028
31 Ga0068861_100178084 3300005719 Bacteria 1767
32 Ga0068862_100001785 3300005844 Bacteria 19458
33 Ga0068862_100245789 3300005844 Bacteria 1629
34 Ga0081538_10084869 3300005981 Bacteria 1666
35 Ga0081539_10000686 3300005985 Bacteria 67858
36 Ga0097621_100009563 3300006237 Bacteria 7046
37 Ga0068871_100003069 3300006358 Bacteria 11453
38 Ga0075428_100080658 3300006844 Bacteria 3551
39 Ga0075428_100232841 3300006844 Bacteria 1988
40 Ga0075430_100000550 3300006846 Bacteria 28484
41 Ga0075430_100007696 3300006846 Bacteria 9098
42 Ga0075431_100076284 3300006847 Bacteria 3459
43 Ga0075431_100168830 3300006847 Bacteria 2249
44 Ga0075431_100262464 3300006847 Bacteria 1752
45 Ga0075434_100000011 3300006871 Bacteria 86261
46 Ga0075434_100005363 3300006871 Bacteria 11665
47 Ga0075429_100039718 3300006880 Bacteria 4095
48 Ga0068865_100003384 3300006881 Bacteria 9548
49 Ga0075436_100152838 3300006914 Bacteria 1625
50 Ga0075435_100060020 3300007076 Bacteria 3083
51 Ga0099794_10015782 3300007265 Bacteria 3340
52 Ga0111539_10016381 3300009094 Bacteria 9192
53 Ga0111539_10053780 3300009094 Bacteria 4793
54 Ga0111539_10225713 3300009094 Bacteria 2181
55 Ga0114129_10069016 3300009147 Bacteria 4927
56 Ga0114129_10087907 3300009147 Bacteria 4309
57 Ga0105249_10004477 3300009553 Bacteria 12079
58 Ga0171462_1017 3300013250 Bacteria 162931
59 Ga0157380_10001505 3300014326 Bacteria 15283
60 Ga0157380_10186727 3300014326 Bacteria 1826
61 Ga0157376_10042432 3300014969 Bacteria 3728
62 Ga0209130_1000087 3300025284 Bacteria 155407
63 Ga0209675_1001192 3300025291 Bacteria 15762
64 Ga0209025_1000014 3300025294 Bacteria 865448
65 Ga0209564_1000017 3300025295 Bacteria 594063
66 Ga0209564_1000077 3300025295 Bacteria 281592
67 Ga0209256_1000057 3300025299 Bacteria 281592
68 Ga0209256_1000102 3300025299 Bacteria 199097
69 Ga0207688_10030324 3300025901 Bacteria 2981
70 Ga0207685_10007274 3300025905 Bacteria 3074
71 Ga0207707_10003163 3300025912 Bacteria 14617
72 Ga0207660_10020883 3300025917 Bacteria 4400
73 Ga0207662_10021030 3300025918 Bacteria 3724
74 Ga0207681_10000542 3300025923 Bacteria 25991
75 Ga0207659_10068577 3300025926 Bacteria 2580
76 Ga0207700_10194627 3300025928 Bacteria 1705
77 Ga0207709_10004987 3300025935 Bacteria 7592
78 Ga0207691_10045407 3300025940 Bacteria 4038
79 Ga0207661_10083454 3300025944 Bacteria 2644
80 Ga0207712_10058621 3300025961 Bacteria 2721
81 Ga0207668_10043479 3300025972 Bacteria 3049
82 Ga0207708_10018761 3300026075 Bacteria 5211
83 Ga0207708_10046445 3300026075 Bacteria 3307
84 Ga0207648_10014910 3300026089 Bacteria 7164
85 Ga0207675_100000802 3300026118 Bacteria 31217
86 Ga0207675_100336905 3300026118 Bacteria 1476
87 Ga0207683_10199295 3300026121 Bacteria 1819
88 Ga0209969_1001086 3300027360 Bacteria 3731
89 Ga0209981_1001444 3300027378 Bacteria 3001
90 Ga0209981_1003461 3300027378 Bacteria 2049
91 Ga0209996_1004473 3300027395 Bacteria 1773
92 Ga0209995_1006433 3300027471 Bacteria 1889
93 Ga0209968_1003221 3300027526 Bacteria 2445
94 Ga0209999_1008898 3300027543 Bacteria 1816
95 Ga0209966_1001185 3300027695 Bacteria 4654
96 Ga0207428_10088434 3300027907 Bacteria 2409
97 Ga0207428_10161078 3300027907 Bacteria 1704
98 Ga0268265_10000606 3300028380 Bacteria 35982
99 Ga0268265_10051078 3300028380 Bacteria 3119
100 Ga0307408_100228897 3300031548 Bacteria 1521
101 Ga0316575_10000374 3300031665 Bacteria 12741
102 Ga0316579_10000822 3300031691 Bacteria 10726
103 Ga0316578_10042224 3300031728 Bacteria 2643
104 Ga0307411_10017216 3300032005 Bacteria 4110
105 Ga0373927_0033283 3300035695 Bacteria 3356
106 Ga0373933_0000657 3300035724 Bacteria 21450
107 Ga0373937_0000358 3300036401 Bacteria 42468
108 Ga0373937_0004969 3300036401 Bacteria 11307
109 Ga0316582_0005062 3300036647 Bacteria 6740
110 Ga0439453_0004074 3300041408 Bacteria 2150
111 Ga0439441_002685 3300042001 Bacteria 2529
112 Ga0439446_0000176 3300042156 Bacteria 11244
113 Ga0439434_0001633 3300042435 Bacteria 6483
114 Ga0439434_0037425 3300042435 Bacteria 1486
115 Ga0439435_0000026 3300042436 Bacteria 16073
116 Ga0439460_0017739 3300042461 Bacteria 1910
117 Ga0451576_0162545 3300045051 Bacteria 2330
118 Ga0495592_0003821 3300046454 Bacteria 10887
119 Ga0495662_0027173 3300046476 Bacteria 2765
120 Ga0495608_0002044 3300046511 Bacteria 14501
121 Ga0495618_0022560 3300046514 Bacteria 3888
122 Ga0495628_0016487 3300046516 Bacteria 6161
123 Ga0495628_0167324 3300046516 Bacteria 1668
124 Ga0495630_0001185 3300046517 Bacteria 17975
125 Ga0495640_0000808 3300046533 Bacteria 23777
126 Ga0495640_0004665 3300046533 Bacteria 10928
127 Ga0495586_0000440 3300046535 Bacteria 24985
128 Ga0495586_0042809 3300046535 Bacteria 2438
129 Ga0495587_0073633 3300046536 Bacteria 1984
130 Ga0495621_0029445 3300046539 Bacteria 1872
131 Ga0495621_0038089 3300046539 Bacteria 1676
132 Ga0495667_0001153 3300046559 Bacteria 17225
133 Ga0495634_0002587 3300046642 Bacteria 14917
134 Ga0495599_0062811 3300046678 Bacteria 2320
135 Ga0495581_0094051 3300047315 Bacteria 1740
136 Ga0495604_0033267 3300047317 Bacteria 4082
137 Ga0495680_0001572 3300047322 Bacteria 24459
138 Ga0495684_0018458 3300047471 Bacteria 5374
139 Ga0496123_0018621 3300048926 Bacteria 5510
140 Ga0496123_0034138 3300048926 Bacteria 3649
141 Ga0496125_0131085 3300048928 Bacteria 1765
142 Ga0501032_0049198 3300049569 Bacteria 2844
143 Ga0501034_0011333 3300049571 Bacteria 9247
144 Ga0501036_0028000 3300049572 Bacteria 4764
145 Ga0501036_0073391 3300049572 Bacteria 2893
146 Ga0501036_0077422 3300049572 Bacteria 2814
147 Ga0501036_0205065 3300049572 Bacteria 1658
148 Ga0501038_0069932 3300049574 Bacteria 2981
149 Ga0501038_0099884 3300049574 Bacteria 2418
150 Ga0501039_0069285 3300049575 Bacteria 2739
151 Ga0501039_0085414 3300049575 Bacteria 2458
152 Ga0501040_0016065 3300049576 Bacteria 4951
153 Ga0501041_0016138 3300049577 Bacteria 4437
154 Ga0501042_0032029 3300049578 Bacteria 3721
155 Ga0501046_0051993 3300049580 Bacteria 3231
156 Ga0501046_0212572 3300049580 Bacteria 1435
157 Ga0501047_0010486 3300049581 Bacteria 8771
158 Ga0501047_0200989 3300049581 Bacteria 1854
159 Ga0501048_0105866 3300049582 Bacteria 1985
160 Ga0501068_0078431 3300049584 Bacteria 2024
161 Ga0501068_0142103 3300049584 Bacteria 1505
162 Ga0501069_0118803 3300049585 Bacteria 1509
163 Ga0501070_0069482 3300049586 Bacteria 2916
164 Ga0501070_0271594 3300049586 Bacteria 1384
165 Ga0501071_0002663 3300049587 Bacteria 10935
166 Ga0501072_0034741 3300049588 Bacteria 3950
167 Ga0501075_0062248 3300049591 Bacteria 2812
168 Ga0501076_0002030 3300049592 Bacteria 13854
169 Ga0501079_0003830 3300049741 Bacteria 11116
170 Ga0501080_0096062 3300049742 Bacteria 2751
171 Ga0501080_0139378 3300049742 Bacteria 2243
172 Ga0501081_0012331 3300049743 Bacteria 5613
173 Ga0501035_0013798 3300049822 Bacteria 7459
174 Ga0501044_0004732 3300049823 Bacteria 15213
175 Ga0501044_0016467 3300049823 Bacteria 7935
176 Ga0501045_0048091 3300049824 Bacteria 3109
177 Ga0501045_0432679 3300049824 Bacteria 979
178 nmdc:mga05p37_185203_c1 3300050507 Bacteria 2531
179 nmdc:mga05p37_67404_c2 3300050507 Bacteria 2631
180 nmdc:mga09592_115574_c1 3300050508 Bacteria 2303
181 nmdc:mga0qj67_187196_c1 3300050509 Bacteria 1682
182 nmdc:mga0qj67_20035_c1 3300050509 Bacteria 5118
183 nmdc:mga0qj67_623_c1 3300050509 Bacteria 24285
184 nmdc:mga06r32_120093_c1 3300050510 Bacteria 2592
185 nmdc:mga08y16_26333_c1 3300050511 Bacteria 6132
186 nmdc:mga08y16_339262_c1 3300050511 Bacteria 1545
187 nmdc:mga08y16_64271_c1 3300050511 Bacteria 3832
188 nmdc:mga08y16_75792_c1 3300050511 Bacteria 3506
189 nmdc:mga0n895_1336_c1 3300050512 Bacteria 18273
190 nmdc:mga0n895_1563_c1 3300050512 Bacteria 17209
191 nmdc:mga08x19_26991_c1 3300050514 Bacteria 3589
192 nmdc:mga08x19_85078_c1 3300050514 Bacteria 2081
193 nmdc:mga0a205_111906_c1 3300050515 Bacteria 2629
194 Ga0495601_0005497 3300053077 Bacteria 7389
195 Ga0501084_0015022 3300054114 Bacteria 6420
196 Ga0501084_0099279 3300054114 Bacteria 2445
197 Ga0590071_010490 3300059421 Bacteria 2170
198 Ga0590077_004080 3300059426 Bacteria 3007
199 Ga0501082_0046283 3300060353 Bacteria 3750

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049824 Ga0501045_0432679 Ga0501045_0432679_17_964 314
2 3300006871 Ga0075434_100005363 Ga0075434_1000053634 332
3 3300050512 nmdc:mga0n895_1563_c1 nmdc:mga0n895_1563_c1_798_1916 332
4 3300006914 Ga0075436_100152838 Ga0075436_1001528381 347
5 3300006844 Ga0075428_100080658 Ga0075428_1000806583 355
6 3300006847 Ga0075431_100076284 Ga0075431_1000762842 355
7 3300006880 Ga0075429_100039718 Ga0075429_1000397185 355
8 3300009147 Ga0114129_10087907 Ga0114129_100879075 355
9 3300050507 nmdc:mga05p37_67404_c2 nmdc:mga05p37_67404_c2_291_1415 355
10 3300050508 nmdc:mga09592_115574_c1 nmdc:mga09592_115574_c1_693_1817 355
11 3300042435 Ga0439434_0037425 Ga0439434_0037425_219_1346 357
12 3300007265 Ga0099794_10015782 Ga0099794_100157824 358
13 3300025299 Ga0209256_1000102 Ga0209256_1000102184 358
14 3300050515 nmdc:mga0a205_111906_c1 nmdc:mga0a205_111906_c1_1029_2165 358
15 3300050507 nmdc:mga05p37_185203_c1 nmdc:mga05p37_185203_c1_1131_2258 359
16 3300005985 Ga0081539_10000686 Ga0081539_1000068659 360
17 3300007076 Ga0075435_100060020 Ga0075435_1000600202 360
18 3300050514 nmdc:mga08x19_85078_c1 nmdc:mga08x19_85078_c1_841_1971 361
19 3300049569 Ga0501032_0049198 Ga0501032_0049198_115_1425 363
20 3300049581 Ga0501047_0010486 Ga0501047_0010486_6643_7953 363
21 3300049586 Ga0501070_0069482 Ga0501070_0069482_332_1642 363
22 3300049822 Ga0501035_0013798 Ga0501035_0013798_5029_6339 363
23 3300049823 Ga0501044_0004732 Ga0501044_0004732_1699_3009 363
24 iso_pu_bacteria 2643221734 2644735753 365
25 3300049572 Ga0501036_0073391 Ga0501036_0073391_1544_2851 366
26 3300006847 Ga0075431_100262464 Ga0075431_1002624642 367
27 3300006871 Ga0075434_100000011 Ga0075434_10000001140 367
28 3300049571 Ga0501034_0011333 Ga0501034_0011333_6109_7299 367
29 3300049578 Ga0501042_0032029 Ga0501042_0032029_1704_2819 367
30 3300049742 Ga0501080_0139378 Ga0501080_0139378_532_1722 367
31 3300050512 nmdc:mga0n895_1336_c1 nmdc:mga0n895_1336_c1_16000_17124 367
32 iso_pu_bacteria 639633007 639785286 368
33 3300005329 Ga0070683_100045484 Ga0070683_1000454845 369
34 3300005330 Ga0070690_100010838 Ga0070690_1000108386 369
35 3300005336 Ga0070680_100061318 Ga0070680_1000613184 369
36 3300005341 Ga0070691_10032352 Ga0070691_100323523 369
37 3300005343 Ga0070687_100006242 Ga0070687_1000062425 369
38 3300005535 Ga0070684_100013383 Ga0070684_1000133837 369
39 3300005536 Ga0070697_100000731 Ga0070697_10000073123 369
40 3300005615 Ga0070702_100079791 Ga0070702_1000797911 369
41 3300005719 Ga0068861_100178084 Ga0068861_1001780842 369
42 3300005981 Ga0081538_10084869 Ga0081538_100848692 369
43 3300006237 Ga0097621_100009563 Ga0097621_1000095633 369
44 3300006358 Ga0068871_100003069 Ga0068871_1000030697 369
45 3300006846 Ga0075430_100007696 Ga0075430_1000076967 369
46 3300009094 Ga0111539_10016381 Ga0111539_100163817 369
47 3300009094 Ga0111539_10225713 Ga0111539_102257132 369
48 3300014969 Ga0157376_10042432 Ga0157376_100424325 369
49 3300025918 Ga0207662_10021030 Ga0207662_100210304 369
50 3300025944 Ga0207661_10083454 Ga0207661_100834542 369
51 3300026118 Ga0207675_100336905 Ga0207675_1003369052 369
52 3300027360 Ga0209969_1001086 Ga0209969_10010865 369
53 3300027907 Ga0207428_10088434 Ga0207428_100884342 369
54 3300027907 Ga0207428_10161078 Ga0207428_101610782 369
55 3300031548 Ga0307408_100228897 Ga0307408_1002288972 369
56 3300032005 Ga0307411_10017216 Ga0307411_100172162 369
57 3300035724 Ga0373933_0000657 Ga0373933_0000657_19538_20662 369
58 3300036401 Ga0373937_0000358 Ga0373937_0000358_27041_28165 369
59 3300036401 Ga0373937_0004969 Ga0373937_0004969_206_1324 369
60 3300042001 Ga0439441_002685 Ga0439441_002685_203_1324 369
61 3300045051 Ga0451576_0162545 Ga0451576_0162545_395_1513 369
62 3300046454 Ga0495592_0003821 Ga0495592_0003821_7398_8516 369
63 3300046476 Ga0495662_0027173 Ga0495662_0027173_902_2020 369
64 3300046511 Ga0495608_0002044 Ga0495608_0002044_8895_10013 369
65 3300046514 Ga0495618_0022560 Ga0495618_0022560_2378_3496 369
66 3300046516 Ga0495628_0016487 Ga0495628_0016487_1232_2350 369
67 3300046516 Ga0495628_0167324 Ga0495628_0167324_17_1135 369
68 3300046517 Ga0495630_0001185 Ga0495630_0001185_10039_11157 369
69 3300046533 Ga0495640_0000808 Ga0495640_0000808_15331_16449 369
70 3300046533 Ga0495640_0004665 Ga0495640_0004665_6711_7829 369
71 3300046535 Ga0495586_0000440 Ga0495586_0000440_14098_15216 369
72 3300046535 Ga0495586_0042809 Ga0495586_0042809_1083_2201 369
73 3300046536 Ga0495587_0073633 Ga0495587_0073633_574_1692 369
74 3300046539 Ga0495621_0029445 Ga0495621_0029445_490_1611 369
75 3300046559 Ga0495667_0001153 Ga0495667_0001153_875_1993 369
76 3300046642 Ga0495634_0002587 Ga0495634_0002587_8701_9819 369
77 3300046678 Ga0495599_0062811 Ga0495599_0062811_501_1619 369
78 3300047315 Ga0495581_0094051 Ga0495581_0094051_128_1246 369
79 3300047317 Ga0495604_0033267 Ga0495604_0033267_2722_3840 369
80 3300047322 Ga0495680_0001572 Ga0495680_0001572_13653_14771 369
81 3300047471 Ga0495684_0018458 Ga0495684_0018458_2032_3150 369
82 3300049572 Ga0501036_0028000 Ga0501036_0028000_1145_2266 369
83 3300049574 Ga0501038_0099884 Ga0501038_0099884_913_2034 369
84 3300049575 Ga0501039_0069285 Ga0501039_0069285_1357_2478 369
85 3300049575 Ga0501039_0085414 Ga0501039_0085414_95_1216 369
86 3300049576 Ga0501040_0016065 Ga0501040_0016065_2143_3264 369
87 3300049577 Ga0501041_0016138 Ga0501041_0016138_664_1785 369
88 3300049580 Ga0501046_0051993 Ga0501046_0051993_1809_2930 369
89 3300049580 Ga0501046_0212572 Ga0501046_0212572_259_1380 369
90 3300049582 Ga0501048_0105866 Ga0501048_0105866_61_1182 369
91 3300049584 Ga0501068_0078431 Ga0501068_0078431_597_1718 369
92 3300049587 Ga0501071_0002663 Ga0501071_0002663_3762_4883 369
93 3300049588 Ga0501072_0034741 Ga0501072_0034741_1339_2460 369
94 3300049591 Ga0501075_0062248 Ga0501075_0062248_415_1536 369
95 3300049592 Ga0501076_0002030 Ga0501076_0002030_11087_12208 369
96 3300049741 Ga0501079_0003830 Ga0501079_0003830_8207_9328 369
97 3300049743 Ga0501081_0012331 Ga0501081_0012331_1805_2926 369
98 3300049824 Ga0501045_0048091 Ga0501045_0048091_987_2108 369
99 3300050509 nmdc:mga0qj67_187196_c1 nmdc:mga0qj67_187196_c1_417_1538 369
100 3300050509 nmdc:mga0qj67_20035_c1 nmdc:mga0qj67_20035_c1_888_2009 369
101 3300050511 nmdc:mga08y16_64271_c1 nmdc:mga08y16_64271_c1_2479_3600 369
102 3300050511 nmdc:mga08y16_75792_c1 nmdc:mga08y16_75792_c1_468_1586 369
103 3300053077 Ga0495601_0005497 Ga0495601_0005497_2012_3130 369
104 3300054114 Ga0501084_0015022 Ga0501084_0015022_3819_4940 369
105 3300060353 Ga0501082_0046283 Ga0501082_0046283_2378_3499 369
106 3300005336 Ga0070680_100080050 Ga0070680_1000800501 370
107 3300005336 Ga0070680_100096791 Ga0070680_1000967912 370
108 3300005345 Ga0070692_10005481 Ga0070692_100054815 370
109 3300005347 Ga0070668_100003178 Ga0070668_1000031787 370
110 3300005353 Ga0070669_100003861 Ga0070669_10000386113 370
111 3300005440 Ga0070705_100017432 Ga0070705_1000174323 370
112 3300005441 Ga0070700_100000344 Ga0070700_1000003448 370
113 3300005441 Ga0070700_100074021 Ga0070700_1000740212 370
114 3300005459 Ga0068867_100009087 Ga0068867_1000090874 370
115 3300005467 Ga0070706_100236693 Ga0070706_1002366932 370
116 3300005536 Ga0070697_100000648 Ga0070697_1000006486 370
117 3300005543 Ga0070672_100064154 Ga0070672_1000641543 370
118 3300005545 Ga0070695_100000362 Ga0070695_10000036224 370
119 3300005546 Ga0070696_100002485 Ga0070696_10000248510 370
120 3300005549 Ga0070704_100009024 Ga0070704_1000090245 370
121 3300005719 Ga0068861_100003847 Ga0068861_1000038477 370
122 3300005844 Ga0068862_100001785 Ga0068862_10000178518 370
123 3300005844 Ga0068862_100245789 Ga0068862_1002457892 370
124 3300006844 Ga0075428_100232841 Ga0075428_1002328411 370
125 3300006846 Ga0075430_100000550 Ga0075430_10000055010 370
126 3300006847 Ga0075431_100168830 Ga0075431_1001688302 370
127 3300006881 Ga0068865_100003384 Ga0068865_1000033847 370
128 3300009094 Ga0111539_10053780 Ga0111539_100537806 370
129 3300009553 Ga0105249_10004477 Ga0105249_1000447712 370
130 3300014326 Ga0157380_10001505 Ga0157380_1000150512 370
131 3300014326 Ga0157380_10186727 Ga0157380_101867272 370
132 3300025901 Ga0207688_10030324 Ga0207688_100303244 370
133 3300025905 Ga0207685_10007274 Ga0207685_100072743 370
134 3300025917 Ga0207660_10020883 Ga0207660_100208834 370
135 3300025923 Ga0207681_10000542 Ga0207681_1000054212 370
136 3300025926 Ga0207659_10068577 Ga0207659_100685774 370
137 3300025928 Ga0207700_10194627 Ga0207700_101946271 370
138 3300025935 Ga0207709_10004987 Ga0207709_100049878 370
139 3300025940 Ga0207691_10045407 Ga0207691_100454074 370
140 3300025961 Ga0207712_10058621 Ga0207712_100586214 370
141 3300025972 Ga0207668_10043479 Ga0207668_100434793 370
142 3300026075 Ga0207708_10018761 Ga0207708_100187615 370
143 3300026075 Ga0207708_10046445 Ga0207708_100464452 370
144 3300026089 Ga0207648_10014910 Ga0207648_100149102 370
145 3300026118 Ga0207675_100000802 Ga0207675_10000080231 370
146 3300026121 Ga0207683_10199295 Ga0207683_101992952 370
147 3300027378 Ga0209981_1001444 Ga0209981_10014443 370
148 3300027395 Ga0209996_1004473 Ga0209996_10044732 370
149 3300027471 Ga0209995_1006433 Ga0209995_10064333 370
150 3300027526 Ga0209968_1003221 Ga0209968_10032213 370
151 3300027543 Ga0209999_1008898 Ga0209999_10088982 370
152 3300028380 Ga0268265_10000606 Ga0268265_1000060618 370
153 3300028380 Ga0268265_10051078 Ga0268265_100510783 370
154 3300031665 Ga0316575_10000374 Ga0316575_100003742 370
155 3300031691 Ga0316579_10000822 Ga0316579_100008223 370
156 3300031728 Ga0316578_10042224 Ga0316578_100422242 370
157 3300035695 Ga0373927_0033283 Ga0373927_0033283_775_1899 370
158 3300036647 Ga0316582_0005062 Ga0316582_0005062_796_1923 370
159 3300042156 Ga0439446_0000176 Ga0439446_0000176_4389_5510 370
160 3300042435 Ga0439434_0001633 Ga0439434_0001633_2645_3766 370
161 3300042436 Ga0439435_0000026 Ga0439435_0000026_1353_2474 370
162 3300046539 Ga0495621_0038089 Ga0495621_0038089_514_1638 370
163 3300049585 Ga0501069_0118803 Ga0501069_0118803_280_1404 370
164 3300050509 nmdc:mga0qj67_623_c1 nmdc:mga0qj67_623_c1_12874_14001 370
165 3300050510 nmdc:mga06r32_120093_c1 nmdc:mga06r32_120093_c1_628_1755 370
166 3300050511 nmdc:mga08y16_26333_c1 nmdc:mga08y16_26333_c1_1977_3101 370
167 3300050511 nmdc:mga08y16_339262_c1 nmdc:mga08y16_339262_c1_266_1390 370
168 3300050514 nmdc:mga08x19_26991_c1 nmdc:mga08x19_26991_c1_67_1191 370
169 3300059421 Ga0590071_010490 Ga0590071_010490_489_1613 370
170 3300059426 Ga0590077_004080 Ga0590077_004080_1444_2568 370
171 3300054114 Ga0501084_0099279 Ga0501084_0099279_574_1704 371
172 3300005458 Ga0070681_10000399 Ga0070681_100003998 372
173 3300009147 Ga0114129_10069016 Ga0114129_100690165 372
174 3300025912 Ga0207707_10003163 Ga0207707_1000316314 372
175 3300027378 Ga0209981_1003461 Ga0209981_10034612 372
176 3300027695 Ga0209966_1001185 Ga0209966_10011855 372
177 3300041408 Ga0439453_0004074 Ga0439453_0004074_860_2005 372
178 3300042461 Ga0439460_0017739 Ga0439460_0017739_660_1805 372
179 iso_pu_bacteria 2526164512 2526213995 372
180 3300049572 Ga0501036_0205065 Ga0501036_0205065_67_1227 379
181 iso_pu_bacteria 2818991467 2819718304 379
182 3300049572 Ga0501036_0077422 Ga0501036_0077422_1624_2802 387
183 3300049574 Ga0501038_0069932 Ga0501038_0069932_334_1512 387
184 3300049581 Ga0501047_0200989 Ga0501047_0200989_65_1243 387
185 3300049584 Ga0501068_0142103 Ga0501068_0142103_252_1430 387
186 3300049586 Ga0501070_0271594 Ga0501070_0271594_127_1305 387
187 3300049742 Ga0501080_0096062 Ga0501080_0096062_808_1986 387
188 3300049823 Ga0501044_0016467 Ga0501044_0016467_5813_6991 387
189 iso_pu_bacteria 2643221736 2644747323 391
190 iso_pu_bacteria 2841760612 2841761846 392
191 iso_pu_bacteria 2844104063 2844104871 392
192 iso_pu_bacteria 2851246043 2851247859 392
193 3300005262 Ga0065165_1000089 Ga0065165_10000896 393
194 3300025284 Ga0209130_1000087 Ga0209130_10000876 393
195 iso_pu_bacteria 2841911363 2841912675 394
196 iso_pu_bacteria 2841917233 2841923088 394
197 iso_pu_bacteria 2917699015 2917699631 394
198 3300003187 JGI25151J46595_10000044 JGI25151J46595_1000004499 395
199 3300003771 Ga0055526_1000194 Ga0055526_100019437 395
200 3300003771 Ga0055526_1000319 Ga0055526_100031924 395
201 3300003775 Ga0055524_1000042 Ga0055524_100004232 395
202 3300013250 Ga0171462_1017 Ga0171462_101715 395
203 3300025291 Ga0209675_1001192 Ga0209675_100119215 395
204 3300025294 Ga0209025_1000014 Ga0209025_1000014257 395
205 3300025295 Ga0209564_1000017 Ga0209564_1000017174 395
206 3300025295 Ga0209564_1000077 Ga0209564_1000077235 395
207 3300025299 Ga0209256_1000057 Ga0209256_1000057235 395
208 3300048926 Ga0496123_0018621 Ga0496123_0018621_3012_4241 395
209 3300048926 Ga0496123_0034138 Ga0496123_0034138_942_2174 395
210 3300048928 Ga0496125_0131085 Ga0496125_0131085_516_1736 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07943

PBP5_C

Penicillin-binding protein 5, C-terminal domain

290

380

0.99

PF00768

Peptidase_S11

D-alanyl-D-alanine carboxypeptidase

34

271

0.96

PF13354

Beta-lactamase2

Beta-lactamase enzyme family

49

266

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tr7-assembly2.cif.gz_B crystal structure of a putative d-alanyl-d-alanine carboxypeptidase from vibrio cholerae o1 biovar eltor str. n16961 0.9544 31 277
5tr7-assembly2.cif.gz_B crystal structure of a putative d-alanyl-d-alanine carboxypeptidase from vibrio cholerae o1 biovar eltor str. n16961 0.9395 31 277
1es5-assembly1.cif.gz_A s216a mutant of streptomyces k15 dd-transpeptidase 0.9289 31 276
1es2-assembly1.cif.gz_A s96a mutant of streptomyces k15 dd-transpeptidase 0.9283 31 276
1es3-assembly1.cif.gz_A c98a mutant of streptomyces k15 dd-transpeptidase 0.9275 31 276
ID Description Score Start End Superfamily
1nj4A01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9417 31 277 3.40.710.10
1esiA00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9165 31 276 3.40.710.10
3mfdB01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8988 35 273 3.40.710.10
1nj4A01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8981 31 277 3.40.710.10
3a3jA02 Mainly Beta;Sandwich;Peptidoglycan synthesis regulatory factor (PBP3), Domain 2;D-Ala-D-Ala carboxypeptidase, C-terminal domain 0.8929 280 368 2.60.410.10
ID Description Score Start End GO Terms
AF-A0A3S1IWL2-F1-model_v4 D-alanyl-D-alanine carboxypeptidase 0.9805 84 250 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0071555
AF-A0A659UGN7-F1-model_v4 D-alanyl-D-alanine carboxypeptidase 0.9753 130 261 GO:0006508
GO:0009002
AF-A0A7C2IYY4-F1-model_v4 deleted 0.975 104 276
AF-A0A7Y8SYM2-F1-model_v4 Serine hydrolase 0.9699 41 276 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0042834
GO:0071555
AF-A0A519HG45-F1-model_v4 D-alanyl-D-alanine carboxypeptidase 0.9694 31 219 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0071555

Feature Viewer

pLDDT pTM Quality
85.13 0.77 High
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Predicted Structure (AlphaFold2)

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