F319177

General Info

Members Datasets Scaffolds Average Seq Length
209 168 418 224

Family's Representative Sequence

Representative Sequence 3300025935|Ga0207709_10264537|Ga0207709_102645371
Length 268
Sequence VSSSPAVYSPDLSHGSRPKPGHGKRMAGRWPIIICMTREPSHHRPESNDDGAGITRVLLAEDDVLLREGLASLLERSGFEVVGQTGNSAWILPLVRDLTPDLVVLDIRMPPTNTTEGLDAAREIRKQFPATGILVLSAHAEVEHAMELLATGQRIGYLLKSRVTDVDEFIETLERIVKGGSVMDPALVQELVSARKRNDPLSVLSTREHEVLALMAEGRSNAGIARRLWVTEGTVEKHVRSILAKLSLPETDDDHRRVLAVVTFLEAR

Samples

Sample ID Description Type Environment
1 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
70 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
107 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
108 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
118 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
119 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
120 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
121 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
122 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
152 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
153 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
154 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
168 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.04
Metatranscriptomes 0.48
Isolates 0.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.96
Nodule 0
Rhizoplane 0.96
Rhizosphere 95.22
Stem 0
Stem Tuber 0
Unclassified 0.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207709_10264537 3300025935 Bacteria 1263
2 JGI24740J21852_10028456 3300001979 Bacteria 1846
3 JGI24739J22299_10061459 3300001989 Bacteria 1186
4 JGI24751J29686_10037547 3300002459 Bacteria 1003
5 JGI25406J46586_10009744 3300003203 Bacteria 4293
6 JGI25407J50210_10000578 3300003373 Bacteria 7404
7 JGI25407J50210_10001001 3300003373 Bacteria 6146
8 JGI25407J50210_10061033 3300003373 Bacteria 947
9 Ga0070676_10014619 3300005328 Bacteria 4317
10 Ga0070683_100028817 3300005329 Bacteria 5022
11 Ga0070670_100007911 3300005331 Bacteria 9047
12 Ga0070680_100001290 3300005336 Bacteria 18118
13 Ga0070682_100194381 3300005337 Bacteria 1427
14 Ga0068868_100479536 3300005338 Bacteria 1086
15 Ga0070691_10008771 3300005341 Bacteria 4629
16 Ga0070668_100001070 3300005347 Bacteria 19264
17 Ga0070675_100474678 3300005354 Bacteria 1124
18 Ga0070667_100165899 3300005367 Bacteria 1948
19 Ga0070714_100066346 3300005435 Bacteria 3110
20 Ga0070713_100061341 3300005436 Bacteria 3145
21 Ga0070713_100166509 3300005436 Bacteria 1971
22 Ga0070710_10000384 3300005437 Bacteria 20605
23 Ga0070711_100030114 3300005439 Bacteria 3590
24 Ga0070705_100023895 3300005440 Unclassified 3290
25 Ga0070700_100010317 3300005441 Bacteria 5155
26 Ga0070694_100008580 3300005444 Bacteria 6257
27 Ga0070662_100000398 3300005457 Bacteria 25861
28 Ga0070662_100642109 3300005457 Bacteria 895
29 Ga0070681_10002262 3300005458 Bacteria 17580
30 Ga0070706_100279592 3300005467 Bacteria 1558
31 Ga0070707_100027103 3300005468 Bacteria 5448
32 Ga0070707_100131938 3300005468 Bacteria 2429
33 Ga0070707_100365164 3300005468 Bacteria 1402
34 Ga0070684_100606200 3300005535 Bacteria 1018
35 Ga0068853_100394590 3300005539 Bacteria 1294
36 Ga0070696_100209448 3300005546 Bacteria 1459
37 Ga0070696_100292657 3300005546 Bacteria 1244
38 Ga0070693_100031274 3300005547 Bacteria 2915
39 Ga0070665_100439054 3300005548 Bacteria 1314
40 Ga0070665_100532020 3300005548 Bacteria 1187
41 Ga0070704_100002247 3300005549 Bacteria 10779
42 Ga0068855_100142269 3300005563 Bacteria 2733
43 Ga0068857_100050648 3300005577 Bacteria 3683
44 Ga0068857_100145438 3300005577 Bacteria 2145
45 Ga0068854_100142003 3300005578 Bacteria 1844
46 Ga0068854_100301060 3300005578 Bacteria 1297
47 Ga0070702_100001457 3300005615 Bacteria 9699
48 Ga0068852_100706846 3300005616 Bacteria 1018
49 Ga0068859_100492627 3300005617 Bacteria 1321
50 Ga0068861_100032710 3300005719 Bacteria 3832
51 Ga0068861_100983636 3300005719 Bacteria 804
52 Ga0068863_100058735 3300005841 Bacteria 3640
53 Ga0068858_100101861 3300005842 Bacteria 2678
54 Ga0068860_100119748 3300005843 Bacteria 2520
55 Ga0068862_100220641 3300005844 Bacteria 1716
56 Ga0081455_10216468 3300005937 Bacteria 1423
57 Ga0081538_10000244 3300005981 Bacteria 61457
58 Ga0081538_10001301 3300005981 Bacteria 25826
59 Ga0081539_10000890 3300005985 Bacteria 57132
60 Ga0081539_10051690 3300005985 Bacteria 2313
61 Ga0070717_10010051 3300006028 Bacteria 7123
62 Ga0070717_10015845 3300006028 Bacteria 5829
63 Ga0070715_10019198 3300006163 Bacteria 2618
64 Ga0070716_100077269 3300006173 Bacteria 1975
65 Ga0070712_100023275 3300006175 Bacteria 4091
66 Ga0075431_100052334 3300006847 Bacteria 4211
67 Ga0097620_100492618 3300006931 Bacteria 1321
68 Ga0105240_10853369 3300009093 Bacteria 983
69 Ga0105245_10004078 3300009098 Bacteria 12971
70 Ga0105245_10392019 3300009098 Bacteria 1386
71 Ga0114129_11255189 3300009147 Bacteria 920
72 Ga0105242_10026496 3300009176 Bacteria 4596
73 Ga0105242_10912344 3300009176 Bacteria 879
74 Ga0105237_10001325 3300009545 Bacteria 32835
75 Ga0105237_10908286 3300009545 Bacteria 887
76 Ga0105238_10285991 3300009551 Bacteria 1631
77 Ga0105249_10069924 3300009553 Bacteria 3240
78 Ga0105249_10120167 3300009553 Bacteria 2496
79 Ga0105249_10120846 3300009553 Bacteria 2489
80 Ga0105239_10166231 3300010375 Bacteria 2467
81 Ga0105246_10099355 3300011119 Bacteria 2115
82 Ga0157378_10141608 3300013297 Bacteria 2233
83 Ga0163162_10044772 3300013306 Bacteria 4433
84 Ga0163162_10150986 3300013306 Bacteria 2441
85 Ga0157375_10674142 3300013308 Bacteria 1189
86 Ga0157375_10796196 3300013308 Bacteria 1094
87 Ga0163163_10382972 3300014325 Bacteria 1464
88 Ga0157377_10255278 3300014745 Bacteria 1138
89 Ga0163161_10020747 3300017792 Bacteria 4612
90 Ga0163161_10393357 3300017792 Bacteria 1110
91 Ga0213871_10055363 3300021441 Bacteria 1095
92 Ga0224712_10083646 3300022467 Bacteria 1323
93 Ga0207692_10007474 3300025898 Bacteria 4480
94 Ga0207699_10415284 3300025906 Bacteria 960
95 Ga0207645_10141429 3300025907 Bacteria 1568
96 Ga0207684_10395195 3300025910 Bacteria 1188
97 Ga0207707_10001980 3300025912 Bacteria 18611
98 Ga0207671_10006848 3300025914 Bacteria 10057
99 Ga0207693_10016536 3300025915 Bacteria 5895
100 Ga0207663_10020587 3300025916 Bacteria 3738
101 Ga0207660_10000508 3300025917 Bacteria 26010
102 Ga0207652_10001104 3300025921 Bacteria 24346
103 Ga0207646_10007275 3300025922 Bacteria 11282
104 Ga0207694_10211374 3300025924 Bacteria 1580
105 Ga0207650_10019166 3300025925 Bacteria 4807
106 Ga0207659_10364956 3300025926 Bacteria 1201
107 Ga0207687_10259124 3300025927 Bacteria 1386
108 Ga0207700_10001729 3300025928 Bacteria 12398
109 Ga0207664_10015432 3300025929 Bacteria 5545
110 Ga0207664_10021807 3300025929 Bacteria 4772
111 Ga0207664_10038154 3300025929 Bacteria 3723
112 Ga0207706_10000838 3300025933 Bacteria 31745
113 Ga0207686_10078820 3300025934 Bacteria 2143
114 Ga0207665_10000891 3300025939 Bacteria 20118
115 Ga0207661_10031491 3300025944 Bacteria 4098
116 Ga0207679_10018680 3300025945 Bacteria 4649
117 Ga0207712_10005737 3300025961 Bacteria 7825
118 Ga0207712_10018580 3300025961 Bacteria 4530
119 Ga0207712_10060817 3300025961 Unclassified 2679
120 Ga0207712_10198499 3300025961 Bacteria 1589
121 Ga0207668_10094576 3300025972 Bacteria 2204
122 Ga0207668_10096370 3300025972 Bacteria 2186
123 Ga0207668_10180807 3300025972 Bacteria 1663
124 Ga0207640_10222753 3300025981 Bacteria 1445
125 Ga0207640_10442506 3300025981 Bacteria 1069
126 Ga0207703_10047860 3300026035 Bacteria 3449
127 Ga0207703_10391971 3300026035 Bacteria 1287
128 Ga0207708_10235367 3300026075 Bacteria 1471
129 Ga0207648_10099977 3300026089 Bacteria 2540
130 Ga0207674_10208763 3300026116 Bacteria 1902
131 Ga0207675_100001941 3300026118 Bacteria 20649
132 Ga0207683_10040057 3300026121 Bacteria 4087
133 Ga0207698_10933112 3300026142 Bacteria 876
134 Ga0268266_10114236 3300028379 Bacteria 2396
135 Ga0268266_10437458 3300028379 Bacteria 1242
136 Ga0268265_10044899 3300028380 Bacteria 3294
137 Ga0268265_10355448 3300028380 Bacteria 1339
138 Ga0268264_10322935 3300028381 Bacteria 1460
139 Ga0307515_10258045 3300028794 Bacteria 1484
140 Ga0307513_10080026 3300031456 Bacteria 3372
141 Ga0307513_10464476 3300031456 Bacteria 988
142 Ga0307514_10106025 3300031649 Bacteria 2005
143 Ga0307416_100079041 3300032002 Bacteria 2770
144 Ga0307416_100530353 3300032002 Bacteria 1247
145 Ga0307411_10440858 3300032005 Bacteria 1087
146 Ga0307415_100030752 3300032126 Bacteria 3450
147 Ga0373935_0238793 3300035692 Bacteria 1268
148 Ga0395900_0320665 3300037418 Bacteria 1530
149 Ga0395905_0912054 3300037471 Bacteria 782
150 Ga0395901_0112723 3300038443 Bacteria 2856
151 Ga0436365_1496591 3300039437 Bacteria 10428
152 Ga0436360_0388618 3300039438 Bacteria 13961
153 Ga0439466_0021441 3300041411 Bacteria 2289
154 Ga0451853_0902840 3300041512 Bacteria 1069
155 Ga0439445_0011890 3300042004 Bacteria 2082
156 Ga0439448_0046216 3300042005 Bacteria 1418
157 Ga0439455_0015272 3300042012 Bacteria 1764
158 Ga0466963_0063828 3300044694 Bacteria 2466
159 Ga0466957_0123484 3300044842 Bacteria 1652
160 Ga0466967_0045992 3300045976 Bacteria 3797
161 Ga0466967_0338395 3300045976 Bacteria 1455
162 Ga0495652_0223441 3300046529 Bacteria 1414
163 Ga0495625_0025199 3300046660 Bacteria 4514
164 Ga0495624_0341321 3300046690 Bacteria 901
165 Ga0495602_0467152 3300048088 Bacteria 888
166 Ga0496100_0583529 3300048903 Bacteria 867
167 Ga0496107_0090341 3300048910 Bacteria 2237
168 Ga0501031_0005450 3300049568 Bacteria 8284
169 Ga0501032_0023443 3300049569 Bacteria 4263
170 Ga0501036_0018097 3300049572 Bacteria 5898
171 Ga0501037_0017916 3300049573 Bacteria 5213
172 Ga0501038_0003037 3300049574 Bacteria 15648
173 Ga0501039_0035187 3300049575 Bacteria 3864
174 Ga0501040_0000556 3300049576 Bacteria 22561
175 Ga0501041_0000575 3300049577 Bacteria 19106
176 Ga0501042_0000872 3300049578 Bacteria 16861
177 Ga0501043_0029277 3300049579 Bacteria 4325
178 Ga0501046_0003425 3300049580 Bacteria 14565
179 Ga0501048_0003782 3300049582 Bacteria 11550
180 Ga0501068_0002778 3300049584 Bacteria 9305
181 Ga0501069_0078433 3300049585 Bacteria 1858
182 Ga0501070_0020709 3300049586 Bacteria 5517
183 Ga0501071_0002428 3300049587 Bacteria 11296
184 Ga0501072_0006417 3300049588 Bacteria 8960
185 Ga0501073_0003113 3300049589 Bacteria 12428
186 Ga0501073_0104564 3300049589 Bacteria 1965
187 Ga0501074_0001706 3300049590 Bacteria 14988
188 Ga0501074_0002303 3300049590 Bacteria 13294
189 Ga0501075_0008825 3300049591 Bacteria 7027
190 Ga0501076_0001888 3300049592 Bacteria 14272
191 Ga0501077_0017057 3300049593 Bacteria 4579
192 Ga0501077_0179818 3300049593 Bacteria 1344
193 Ga0501079_0000478 3300049741 Bacteria 26398
194 Ga0501080_0008695 3300049742 Bacteria 9219
195 Ga0501081_0030901 3300049743 Bacteria 3628
196 Ga0501083_0002629 3300049744 Bacteria 12368
197 Ga0501035_0009527 3300049822 Bacteria 9032
198 Ga0501044_0106974 3300049823 Bacteria 2809
199 Ga0501045_0004589 3300049824 Bacteria 9536
200 nmdc:mga0yw44_18983_c1 3300050492 Bacteria 3781
201 nmdc:mga06r32_121363_c1 3300050510 Bacteria 2578
202 nmdc:mga06r32_537678_c1 3300050510 Bacteria 1143
203 nmdc:mga0a205_520488_c1 3300050515 Bacteria 1046
204 Ga0500616_0003851 3300053153 Bacteria 11081
205 Ga0501084_0006402 3300054114 Bacteria 9676
206 Ga0501084_0242610 3300054114 Bacteria 1521
207 Ga0501082_0006797 3300060353 Bacteria 9885
208 Ga0530510_0001171 3300061734 Bacteria 17421
209 2816426528 2816332119 Bacteria 8120218
210 Ga0207709_10264537
211 JGI24740J21852_10028456
212 JGI24739J22299_10061459
213 JGI24751J29686_10037547
214 JGI25406J46586_10009744
215 JGI25407J50210_10000578
216 JGI25407J50210_10001001
217 JGI25407J50210_10061033
218 Ga0070676_10014619
219 Ga0070683_100028817
220 Ga0070670_100007911
221 Ga0070680_100001290
222 Ga0070682_100194381
223 Ga0068868_100479536
224 Ga0070691_10008771
225 Ga0070668_100001070
226 Ga0070675_100474678
227 Ga0070667_100165899
228 Ga0070714_100066346
229 Ga0070713_100061341
230 Ga0070713_100166509
231 Ga0070710_10000384
232 Ga0070711_100030114
233 Ga0070705_100023895
234 Ga0070700_100010317
235 Ga0070694_100008580
236 Ga0070662_100000398
237 Ga0070662_100642109
238 Ga0070681_10002262
239 Ga0070706_100279592
240 Ga0070707_100027103
241 Ga0070707_100131938
242 Ga0070707_100365164
243 Ga0070684_100606200
244 Ga0068853_100394590
245 Ga0070696_100209448
246 Ga0070696_100292657
247 Ga0070693_100031274
248 Ga0070665_100439054
249 Ga0070665_100532020
250 Ga0070704_100002247
251 Ga0068855_100142269
252 Ga0068857_100050648
253 Ga0068857_100145438
254 Ga0068854_100142003
255 Ga0068854_100301060
256 Ga0070702_100001457
257 Ga0068852_100706846
258 Ga0068859_100492627
259 Ga0068861_100032710
260 Ga0068861_100983636
261 Ga0068863_100058735
262 Ga0068858_100101861
263 Ga0068860_100119748
264 Ga0068862_100220641
265 Ga0081455_10216468
266 Ga0081538_10000244
267 Ga0081538_10001301
268 Ga0081539_10000890
269 Ga0081539_10051690
270 Ga0070717_10010051
271 Ga0070717_10015845
272 Ga0070715_10019198
273 Ga0070716_100077269
274 Ga0070712_100023275
275 Ga0075431_100052334
276 Ga0097620_100492618
277 Ga0105240_10853369
278 Ga0105245_10004078
279 Ga0105245_10392019
280 Ga0114129_11255189
281 Ga0105242_10026496
282 Ga0105242_10912344
283 Ga0105237_10001325
284 Ga0105237_10908286
285 Ga0105238_10285991
286 Ga0105249_10069924
287 Ga0105249_10120167
288 Ga0105249_10120846
289 Ga0105239_10166231
290 Ga0105246_10099355
291 Ga0157378_10141608
292 Ga0163162_10044772
293 Ga0163162_10150986
294 Ga0157375_10674142
295 Ga0157375_10796196
296 Ga0163163_10382972
297 Ga0157377_10255278
298 Ga0163161_10020747
299 Ga0163161_10393357
300 Ga0213871_10055363
301 Ga0224712_10083646
302 Ga0207692_10007474
303 Ga0207699_10415284
304 Ga0207645_10141429
305 Ga0207684_10395195
306 Ga0207707_10001980
307 Ga0207671_10006848
308 Ga0207693_10016536
309 Ga0207663_10020587
310 Ga0207660_10000508
311 Ga0207652_10001104
312 Ga0207646_10007275
313 Ga0207694_10211374
314 Ga0207650_10019166
315 Ga0207659_10364956
316 Ga0207687_10259124
317 Ga0207700_10001729
318 Ga0207664_10015432
319 Ga0207664_10021807
320 Ga0207664_10038154
321 Ga0207706_10000838
322 Ga0207686_10078820
323 Ga0207665_10000891
324 Ga0207661_10031491
325 Ga0207679_10018680
326 Ga0207712_10005737
327 Ga0207712_10018580
328 Ga0207712_10060817
329 Ga0207712_10198499
330 Ga0207668_10094576
331 Ga0207668_10096370
332 Ga0207668_10180807
333 Ga0207640_10222753
334 Ga0207640_10442506
335 Ga0207703_10047860
336 Ga0207703_10391971
337 Ga0207708_10235367
338 Ga0207648_10099977
339 Ga0207674_10208763
340 Ga0207675_100001941
341 Ga0207683_10040057
342 Ga0207698_10933112
343 Ga0268266_10114236
344 Ga0268266_10437458
345 Ga0268265_10044899
346 Ga0268265_10355448
347 Ga0268264_10322935
348 Ga0307515_10258045
349 Ga0307513_10080026
350 Ga0307513_10464476
351 Ga0307514_10106025
352 Ga0307416_100079041
353 Ga0307416_100530353
354 Ga0307411_10440858
355 Ga0307415_100030752
356 Ga0373935_0238793
357 Ga0395900_0320665
358 Ga0395905_0912054
359 Ga0395901_0112723
360 Ga0436365_1496591
361 Ga0436360_0388618
362 Ga0439466_0021441
363 Ga0451853_0902840
364 Ga0439445_0011890
365 Ga0439448_0046216
366 Ga0439455_0015272
367 Ga0466963_0063828
368 Ga0466957_0123484
369 Ga0466967_0045992
370 Ga0466967_0338395
371 Ga0495652_0223441
372 Ga0495625_0025199
373 Ga0495624_0341321
374 Ga0495602_0467152
375 Ga0496100_0583529
376 Ga0496107_0090341
377 Ga0501031_0005450
378 Ga0501032_0023443
379 Ga0501036_0018097
380 Ga0501037_0017916
381 Ga0501038_0003037
382 Ga0501039_0035187
383 Ga0501040_0000556
384 Ga0501041_0000575
385 Ga0501042_0000872
386 Ga0501043_0029277
387 Ga0501046_0003425
388 Ga0501048_0003782
389 Ga0501068_0002778
390 Ga0501069_0078433
391 Ga0501070_0020709
392 Ga0501071_0002428
393 Ga0501072_0006417
394 Ga0501073_0003113
395 Ga0501073_0104564
396 Ga0501074_0001706
397 Ga0501074_0002303
398 Ga0501075_0008825
399 Ga0501076_0001888
400 Ga0501077_0017057
401 Ga0501077_0179818
402 Ga0501079_0000478
403 Ga0501080_0008695
404 Ga0501081_0030901
405 Ga0501083_0002629
406 Ga0501035_0009527
407 Ga0501044_0106974
408 Ga0501045_0004589
409 nmdc:mga0yw44_18983_c1
410 nmdc:mga06r32_121363_c1
411 nmdc:mga06r32_537678_c1
412 nmdc:mga0a205_520488_c1
413 Ga0500616_0003851
414 Ga0501084_0006402
415 Ga0501084_0242610
416 Ga0501082_0006797
417 Ga0530510_0001171
418 2816426528

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

202

253

0.95

PF00072

Response_reg

Response regulator receiver domain

57

174

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g97-assembly1.cif.gz_A crystal structure of the response regulator phyr from brucella abortus 0.9428 13 98
7w9h-assembly1.cif.gz_A crystal structure of the receiver domain of the transcription regulator fler from pseudomonas aeruginosa 0.9384 13 111
5uxv-assembly2.cif.gz_B crystal structure of anti-anti-sigma factor phyr i40v/s51c mutant from bartonella quintana 0.9265 13 97
4nic-assembly2.cif.gz_D crystal structure of klebsiella pneumoniae rsta bef3-activated n-terminal receiver domain 0.9121 15 137
1je8-assembly2.cif.gz_E two-component response regulator narl/dna complex: dna bending found in a high affinity site 0.9102 160 226
ID Description Score Start End Superfamily
1yioA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9439 162 227 1.10.10.10
af_P69228_9_89_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9404 13 97 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9343 14 97 3.40.50.2300
4qicC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.934 14 92 3.40.50.2300
af_P9WGM7_2_84_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9339 11 97 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A1I2SCA5-F1-model_v4 Response regulator receiver domain-containing protein 0.9934 15 146 GO:0000160
GO:0003677
AF-A9WTE0-F1-model_v4 Two-component response regulator 0.9853 12 102 GO:0000160
AF-A0A7Y5X430-F1-model_v4 Response regulator 0.98 11 150 GO:0000160
GO:0004016
GO:0009190
AF-A0A538JGH7-F1-model_v4 Response regulator 0.9798 12 146 GO:0000160
GO:0004016
GO:0009190
AF-A0A7W7MWK1-F1-model_v4 DNA-binding NarL/FixJ family response regulator 0.9771 12 119 GO:0000160
GO:0003677

Map