F319050

General Info

Members Datasets Scaffolds Average Seq Length
209 140 193 285

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10029995|Ga0105237_100299951
Length 333
Sequence VSWAQHSTLRDVMSNDLSRSPPITAGDSRISITLIDMSRVLEVIPLRSFVAVADCGGFQRAAASLHLSQAAVSQHVRRLELSVGRPLVERHGRGSRFTQDGERLLGYARRVLAVHDEALASFGVETDQTVVIGSTEHAAAQLLPGLAAELVRQLPEHQARLRIDRGSNLREGLAAGRIDLALLLGPADDPRATYVGPLSLTWYAAPGWRLPTNGQPVPLVAFDDPCALRTRALETLAQHGIPAVIGAEATQLAGVQAAVAAGSGVALMATLGQTPEGLVTVDELPVAAPLDLAVWTRRGLDDVVVDCTVAALRALLEPGSRALTVDSELAKGA

Samples

Sample ID Description Type Environment
1 2506783011 Frankia datiscae Dg1 Isolate Nodule
2 2517572101 Frankia sp. DC12 Isolate Nodule
3 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
4 2619618881 Frankia sp. ACN1ag Isolate Unclassified
5 2619619003 Frankia sp. CpI1-P Isolate Nodule
6 2626541554 Frankia sp. AvcI.1 Isolate Nodule
7 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
8 2671180195 Frankia sp. CcI49 Isolate Nodule
9 2773857922 Frankia sp. CcI49 Isolate Nodule
10 2773857933 Frankia sp. BMG5.30 Isolate Nodule
11 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
12 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
13 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
66 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
67 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
68 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
69 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
70 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
86 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
90 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
109 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
131 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
132 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
133 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
134 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
136 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
137 8002784119 Frankia sp. AgB1.9 Isolate Nodule
138 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
139 8054920844 Frankia tisae Agncl-8 Isolate Nodule
140 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.87
Metatranscriptomes 0.48
Isolates 7.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11
Nodule 5.26
Rhizoplane 13.88
Rhizosphere 50.72
Stem 0
Stem Tuber 0
Unclassified 19.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1002874 3300003792 Bacteria 8742
2 Ga0055540_1007448 3300003792 Bacteria 4128
3 Ga0055540_1007940 3300003792 Bacteria 3902
4 Ga0070669_100008356 3300005353 Bacteria 7385
5 Ga0070667_100000391 3300005367 Bacteria 47388
6 Ga0070714_100660596 3300005435 Bacteria 1007
7 Ga0070663_100097493 3300005455 Bacteria 2189
8 Ga0070678_100120361 3300005456 Bacteria 2069
9 Ga0070685_10059718 3300005466 Bacteria 2227
10 Ga0070679_100177346 3300005530 Bacteria 2104
11 Ga0068853_100020996 3300005539 Bacteria 5436
12 Ga0070665_100049334 3300005548 Bacteria 4224
13 Ga0068852_100645876 3300005616 Bacteria 1065
14 Ga0068859_100012772 3300005617 Bacteria 8439
15 Ga0068864_100400005 3300005618 Bacteria 1305
16 Ga0068863_100000992 3300005841 Bacteria 28496
17 Ga0068858_100003214 3300005842 Bacteria 16314
18 Ga0068858_100194261 3300005842 Bacteria 1918
19 Ga0068860_100000065 3300005843 Bacteria 186634
20 Ga0068862_100000028 3300005844 Bacteria 184197
21 Ga0075365_10010681 3300006038 Bacteria 5363
22 Ga0075365_10051851 3300006038 Bacteria 2711
23 Ga0075365_10075090 3300006038 Bacteria 2281
24 Ga0075365_10081713 3300006038 Bacteria 2190
25 Ga0075363_100019567 3300006048 Bacteria 3385
26 Ga0075364_10240530 3300006051 Bacteria 1230
27 Ga0075370_10000190 3300006353 Bacteria 21660
28 Ga0068865_100348869 3300006881 Bacteria 1198
29 Ga0097620_100012772 3300006931 Bacteria 8439
30 Ga0105251_10021813 3300009011 Bacteria 3336
31 Ga0105247_10000032 3300009101 Bacteria 185415
32 Ga0105247_10001120 3300009101 Bacteria 19973
33 Ga0105248_10006592 3300009177 Bacteria 12725
34 Ga0105248_10462417 3300009177 Bacteria 1430
35 Ga0105237_10000346 3300009545 Bacteria 65318
36 Ga0105237_10029995 3300009545 Bacteria 5526
37 Ga0105239_10015414 3300010375 Bacteria 8469
38 Ga0105239_10018741 3300010375 Bacteria 7645
39 Ga0163163_10034485 3300014325 Bacteria 4902
40 Ga0163163_10330217 3300014325 Bacteria 1579
41 Ga0157376_10242555 3300014969 Bacteria 1679
42 Ga0213874_10051810 3300021377 Bacteria 1261
43 Ga0213876_10024519 3300021384 Bacteria 3184
44 Ga0213876_10046770 3300021384 Bacteria 2288
45 Ga0213875_10019732 3300021388 Bacteria 3241
46 Ga0209673_1010017 3300025273 Bacteria 4039
47 Ga0209051_1000374 3300025303 Bacteria 64311
48 Ga0209051_1001965 3300025303 Bacteria 15801
49 Ga0209051_1018352 3300025303 Bacteria 3096
50 Ga0207713_1054169 3300025735 Bacteria 1575
51 Ga0207710_10000022 3300025900 Bacteria 335632
52 Ga0207710_10000063 3300025900 Bacteria 163065
53 Ga0207710_10000077 3300025900 Bacteria 145153
54 Ga0207671_10004495 3300025914 Bacteria 13277
55 Ga0207671_10159607 3300025914 Bacteria 1745
56 Ga0207652_10173048 3300025921 Bacteria 1938
57 Ga0207681_10002378 3300025923 Bacteria 11963
58 Ga0207704_10319109 3300025938 Bacteria 1198
59 Ga0207711_10001226 3300025941 Bacteria 24313
60 Ga0207711_10246106 3300025941 Bacteria 1640
61 Ga0207712_10000020 3300025961 Bacteria 292796
62 Ga0207658_10000284 3300025986 Bacteria 53042
63 Ga0207703_10143220 3300026035 Bacteria 2076
64 Ga0207639_10007554 3300026041 Bacteria 7414
65 Ga0207678_10147874 3300026067 Bacteria 2005
66 Ga0207641_10004747 3300026088 Bacteria 11717
67 Ga0207698_10299698 3300026142 Bacteria 1496
68 Ga0268266_10014275 3300028379 Bacteria 6831
69 Ga0268265_10000004 3300028380 Bacteria 648376
70 Ga0268264_10000024 3300028381 Bacteria 470081
71 Ga0265337_1000234 3300028556 Bacteria 30013
72 Ga0265326_10002230 3300028558 Bacteria 6569
73 Ga0265319_1002884 3300028563 Bacteria 9185
74 Ga0265334_10000260 3300028573 Bacteria 29896
75 Ga0265318_10005363 3300028577 Bacteria 6025
76 Ga0265336_10001536 3300028666 Bacteria 10376
77 Ga0265338_10000127 3300028800 Bacteria 139864
78 Ga0265338_10003892 3300028800 Bacteria 20645
79 Ga0265338_10013654 3300028800 Bacteria 9146
80 Ga0265324_10006055 3300029957 Bacteria 5108
81 Ga0265332_10004301 3300031238 Bacteria 6718
82 Ga0265320_10007677 3300031240 Bacteria 6669
83 Ga0265325_10018800 3300031241 Bacteria 3830
84 Ga0265340_10009006 3300031247 Bacteria 5373
85 Ga0265339_10058344 3300031249 Bacteria 2084
86 Ga0265327_10000019 3300031251 Bacteria 427653
87 Ga0265327_10000154 3300031251 Bacteria 148866
88 Ga0265327_10012649 3300031251 Bacteria 5675
89 Ga0265316_10049695 3300031344 Bacteria 3302
90 Ga0265313_10016642 3300031595 Bacteria 4219
91 Ga0265342_10002219 3300031712 Bacteria 17052
92 Ga0307410_10321500 3300031852 Bacteria 1228
93 Ga0307409_100113023 3300031995 Bacteria 2282
94 Ga0307415_100386570 3300032126 Bacteria 1190
95 Ga0316214_1001424 3300033545 Bacteria 2782
96 Ga0372808_004611 3300036459 Bacteria 1770
97 Ga0436364_0256774 3300037853 Bacteria 34884
98 Ga0436365_0233412 3300039437 Bacteria 6249
99 Ga0436365_0960069 3300039437 Bacteria 12819
100 Ga0436365_1086754 3300039437 Bacteria 23501
101 Ga0436363_0396497 3300039450 Bacteria 1363
102 Ga0451837_0203431 3300041494 Bacteria 949
103 Ga0466965_0008942 3300044683 Bacteria 4643
104 Ga0466965_0066338 3300044683 Bacteria 1809
105 Ga0466965_0179375 3300044683 Bacteria 1117
106 Ga0466966_0058282 3300044684 Bacteria 2441
107 Ga0466963_0002736 3300044694 Bacteria 9951
108 Ga0466963_0441133 3300044694 Bacteria 918
109 Ga0466968_0002317 3300044735 Bacteria 6962
110 Ga0466970_0045237 3300044765 Bacteria 2343
111 Ga0466957_0006252 3300044842 Bacteria 6720
112 Ga0466957_0170232 3300044842 Bacteria 1418
113 Ga0466957_0242065 3300044842 Bacteria 1197
114 Ga0466960_0002360 3300044901 Bacteria 7102
115 Ga0466960_0027322 3300044901 Bacteria 2601
116 Ga0466959_0003040 3300045049 Bacteria 10848
117 Ga0466959_0126176 3300045049 Bacteria 1816
118 Ga0466958_0034519 3300045836 Bacteria 3018
119 Ga0466967_0004835 3300045976 Bacteria 9188
120 Ga0466967_0038324 3300045976 Bacteria 4110
121 Ga0466967_0285638 3300045976 Unclassified 1584
122 Ga0466967_0399946 3300045976 Bacteria 1336
123 Ga0495583_0076654 3300046506 Bacteria 1460
124 Ga0495606_0033245 3300046507 Bacteria 3560
125 Ga0495648_0006131 3300046524 Bacteria 9854
126 Ga0495642_0120572 3300046528 Bacteria 1125
127 Ga0495668_0011032 3300046616 Bacteria 5435
128 Ga0495611_0020246 3300046648 Bacteria 2863
129 Ga0495672_0004146 3300047320 Bacteria 12042
130 Ga0495686_0003290 3300047472 Bacteria 14125
131 Ga0496100_0001059 3300048903 Bacteria 13276
132 Ga0496100_0001991 3300048903 Bacteria 10232
133 Ga0496101_0000077 3300048904 Bacteria 109236
134 Ga0496101_0001446 3300048904 Bacteria 14183
135 Ga0496101_0085716 3300048904 Bacteria 2335
136 Ga0496101_0288768 3300048904 Bacteria 1283
137 Ga0496102_0000037 3300048905 Bacteria 199368
138 Ga0496102_0001329 3300048905 Bacteria 22197
139 Ga0496102_0081312 3300048905 Bacteria 2987
140 Ga0496102_0097053 3300048905 Bacteria 2733
141 Ga0496102_0115991 3300048905 Bacteria 2499
142 Ga0496102_0196689 3300048905 Bacteria 1900
143 Ga0496103_0000004 3300048906 Bacteria 510080
144 Ga0496103_0170565 3300048906 Bacteria 1397
145 Ga0496104_0071094 3300048907 Bacteria 3308
146 Ga0496105_0001050 3300048908 Bacteria 19148
147 Ga0496106_0001022 3300048909 Bacteria 20554
148 Ga0496106_0002196 3300048909 Bacteria 14591
149 Ga0496106_0108614 3300048909 Unclassified 2158
150 Ga0496107_0000550 3300048910 Bacteria 20965
151 Ga0496107_0006939 3300048910 Bacteria 7804
152 Ga0496108_0105763 3300048911 Bacteria 2403
153 Ga0496108_0548863 3300048911 Bacteria 1008
154 Ga0496113_0045414 3300048916 Bacteria 3258
155 Ga0496114_0012396 3300048917 Bacteria 6823
156 Ga0496114_0063953 3300048917 Bacteria 3081
157 Ga0496114_0291171 3300048917 Bacteria 1441
158 Ga0496114_0475949 3300048917 Bacteria 1105
159 Ga0496115_0021467 3300048918 Bacteria 4990
160 Ga0496116_0000056 3300048919 Bacteria 282554
161 Ga0496116_0000099 3300048919 Bacteria 195607
162 Ga0496117_0000003 3300048920 Bacteria 1881097
163 Ga0496117_0015399 3300048920 Bacteria 6521
164 Ga0496118_0000001 3300048921 Bacteria 1881100
165 Ga0496118_0000320 3300048921 Bacteria 83005
166 Ga0496118_0004382 3300048921 Bacteria 16784
167 Ga0496119_0001894 3300048922 Bacteria 24029
168 Ga0496119_0003833 3300048922 Bacteria 15365
169 Ga0496119_0008492 3300048922 Bacteria 9012
170 Ga0496119_0022011 3300048922 Bacteria 4582
171 Ga0496119_0046039 3300048922 Bacteria 2728
172 Ga0496120_0001689 3300048923 Bacteria 25331
173 Ga0496120_0012266 3300048923 Bacteria 5841
174 Ga0496121_0002761 3300048924 Bacteria 26054
175 Ga0496121_0005582 3300048924 Bacteria 16066
176 Ga0496121_0007709 3300048924 Bacteria 12919
177 Ga0496125_0082942 3300048928 Bacteria 2441
178 Ga0496126_0000586 3300048929 Bacteria 68837
179 Ga0496126_0000735 3300048929 Bacteria 59474
180 Ga0496126_0005544 3300048929 Bacteria 14360
181 Ga0496126_0172216 3300048929 Bacteria 1843
182 Ga0496126_0317292 3300048929 Bacteria 1282
183 Ga0501047_0534254 3300049581 Bacteria 998
184 nmdc:mga03n38_217745_c1 3300050490 Bacteria 995
185 nmdc:mga0yw44_101828_c1 3300050492 Bacteria 1830
186 nmdc:mga0yw44_54141_c1 3300050492 Bacteria 2438
187 nmdc:mga0yw44_61439_c1 3300050492 Bacteria 2305
188 nmdc:mga0yw44_88065_c1 3300050492 Bacteria 1957
189 Ga0500635_0003127 3300053080 Bacteria 4140
190 Ga0500644_0000145 3300053088 Bacteria 44098
191 Ga0500652_003464 3300053131 Bacteria 4788
192 Ga0500616_0007284 3300053153 Bacteria 7058
193 Ga0466962_0133577 3300061719 Bacteria 1200

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041494 Ga0451837_0203431 Ga0451837_0203431_201_935 244
2 3300014325 Ga0163163_10330217 Ga0163163_103302172 246
3 3300028800 Ga0265338_10000127 Ga0265338_1000012753 256
4 3300006038 Ga0075365_10010681 Ga0075365_100106813 263
5 3300044842 Ga0466957_0242065 Ga0466957_0242065_82_933 263
6 3300050492 nmdc:mga0yw44_54141_c1 nmdc:mga0yw44_54141_c1_238_1113 263
7 3300006038 Ga0075365_10051851 Ga0075365_100518512 264
8 3300006048 Ga0075363_100019567 Ga0075363_1000195672 264
9 3300006353 Ga0075370_10000190 Ga0075370_1000019013 264
10 3300045049 Ga0466959_0126176 Ga0466959_0126176_209_1186 264
11 3300048929 Ga0496126_0000586 Ga0496126_0000586_57570_58469 264
12 3300050490 nmdc:mga03n38_217745_c1 nmdc:mga03n38_217745_c1_12_890 264
13 3300050492 nmdc:mga0yw44_61439_c1 nmdc:mga0yw44_61439_c1_704_1582 264
14 3300021384 Ga0213876_10046770 Ga0213876_100467701 265
15 3300031852 Ga0307410_10321500 Ga0307410_103215001 265
16 3300031995 Ga0307409_100113023 Ga0307409_1001130232 265
17 3300032126 Ga0307415_100386570 Ga0307415_1003865701 265
18 3300039437 Ga0436365_0960069 Ga0436365_0960069_5926_6777 265
19 3300044683 Ga0466965_0179375 Ga0466965_0179375_167_1018 266
20 3300044694 Ga0466963_0002736 Ga0466963_0002736_5564_6415 266
21 3300044901 Ga0466960_0002360 Ga0466960_0002360_5216_6067 266
22 3300045836 Ga0466958_0034519 Ga0466958_0034519_1963_2814 266
23 3300045976 Ga0466967_0004835 Ga0466967_0004835_1809_2660 266
24 3300061719 Ga0466962_0133577 Ga0466962_0133577_85_948 267
25 3300006051 Ga0075364_10240530 Ga0075364_102405302 268
26 3300028556 Ga0265337_1000234 Ga0265337_100023424 269
27 3300028558 Ga0265326_10002230 Ga0265326_100022304 269
28 3300028563 Ga0265319_1002884 Ga0265319_10028843 269
29 3300028573 Ga0265334_10000260 Ga0265334_100002603 269
30 3300028577 Ga0265318_10005363 Ga0265318_100053633 269
31 3300028666 Ga0265336_10001536 Ga0265336_100015362 269
32 3300028800 Ga0265338_10013654 Ga0265338_100136543 269
33 3300029957 Ga0265324_10006055 Ga0265324_100060554 269
34 3300031238 Ga0265332_10004301 Ga0265332_100043017 269
35 3300031240 Ga0265320_10007677 Ga0265320_100076773 269
36 3300031241 Ga0265325_10018800 Ga0265325_100188003 269
37 3300031247 Ga0265340_10009006 Ga0265340_100090064 269
38 3300031249 Ga0265339_10058344 Ga0265339_100583442 269
39 3300031344 Ga0265316_10049695 Ga0265316_100496953 269
40 3300031595 Ga0265313_10016642 Ga0265313_100166422 269
41 3300031712 Ga0265342_10002219 Ga0265342_100022199 269
42 3300046528 Ga0495642_0120572 Ga0495642_0120572_292_1104 270
43 3300006038 Ga0075365_10075090 Ga0075365_100750902 271
44 3300039437 Ga0436365_1086754 Ga0436365_1086754_14535_15386 271
45 3300044683 Ga0466965_0066338 Ga0466965_0066338_380_1243 271
46 3300050492 nmdc:mga0yw44_101828_c1 nmdc:mga0yw44_101828_c1_648_1535 271
47 3300005530 Ga0070679_100177346 Ga0070679_1001773462 273
48 3300025921 Ga0207652_10173048 Ga0207652_101730482 273
49 3300048905 Ga0496102_0097053 Ga0496102_0097053_1779_2630 274
50 3300048906 Ga0496103_0170565 Ga0496103_0170565_13_864 274
51 3300048921 Ga0496118_0000320 Ga0496118_0000320_56026_56877 274
52 3300053088 Ga0500644_0000145 Ga0500644_0000145_1845_2840 276
53 3300031251 Ga0265327_10000019 Ga0265327_10000019290 277
54 3300036459 Ga0372808_004611 Ga0372808_004611_242_1111 277
55 3300044694 Ga0466963_0441133 Ga0466963_0441133_38_889 277
56 3300048917 Ga0496114_0063953 Ga0496114_0063953_654_1505 277
57 3300048929 Ga0496126_0005544 Ga0496126_0005544_8714_9565 277
58 3300048929 Ga0496126_0172216 Ga0496126_0172216_741_1646 277
59 iso_pu_bacteria 8002784119 8002790258 278
60 iso_pu_bacteria 2506783011 2506867300 279
61 iso_pu_bacteria 2517572101 2517763600 279
62 iso_pu_bacteria 2643221687 2644486411 279
63 iso_pu_bacteria 2671180195 2671838833 279
64 iso_pu_bacteria 2773857922 2774856989 279
65 iso_pu_bacteria 2902792274 2902798468 279
66 iso_pu_bacteria 2902837492 2902840172 279
67 iso_pu_bacteria 8055157932 8055158153 279
68 3300009101 Ga0105247_10001120 Ga0105247_1000112018 280
69 3300025900 Ga0207710_10000063 Ga0207710_10000063139 280
70 3300048909 Ga0496106_0108614 Ga0496106_0108614_1002_1985 280
71 3300048922 Ga0496119_0022011 Ga0496119_0022011_1856_2839 280
72 3300048924 Ga0496121_0005582 Ga0496121_0005582_5465_6448 280
73 3300005435 Ga0070714_100660596 Ga0070714_1006605961 282
74 3300028800 Ga0265338_10003892 Ga0265338_100038928 282
75 3300044684 Ga0466966_0058282 Ga0466966_0058282_1149_2036 282
76 3300044842 Ga0466957_0006252 Ga0466957_0006252_5703_6590 282
77 3300048905 Ga0496102_0115991 Ga0496102_0115991_1042_1896 282
78 3300048919 Ga0496116_0000099 Ga0496116_0000099_5166_6020 282
79 3300048920 Ga0496117_0015399 Ga0496117_0015399_3110_3964 282
80 3300048921 Ga0496118_0004382 Ga0496118_0004382_10798_11652 282
81 3300048922 Ga0496119_0001894 Ga0496119_0001894_5133_5987 282
82 3300053080 Ga0500635_0003127 Ga0500635_0003127_2645_3514 282
83 3300053131 Ga0500652_003464 Ga0500652_003464_2459_3328 282
84 3300003792 Ga0055540_1002874 Ga0055540_10028744 283
85 3300003792 Ga0055540_1007448 Ga0055540_10074484 283
86 3300003792 Ga0055540_1007940 Ga0055540_10079404 283
87 3300005353 Ga0070669_100008356 Ga0070669_1000083568 283
88 3300005367 Ga0070667_100000391 Ga0070667_10000039154 283
89 3300005455 Ga0070663_100097493 Ga0070663_1000974932 283
90 3300005456 Ga0070678_100120361 Ga0070678_1001203612 283
91 3300005466 Ga0070685_10059718 Ga0070685_100597182 283
92 3300005539 Ga0068853_100020996 Ga0068853_1000209963 283
93 3300005548 Ga0070665_100049334 Ga0070665_1000493343 283
94 3300005616 Ga0068852_100645876 Ga0068852_1006458762 283
95 3300005617 Ga0068859_100012772 Ga0068859_1000127728 283
96 3300005618 Ga0068864_100400005 Ga0068864_1004000051 283
97 3300005841 Ga0068863_100000992 Ga0068863_10000099224 283
98 3300005842 Ga0068858_100003214 Ga0068858_10000321416 283
99 3300005842 Ga0068858_100194261 Ga0068858_1001942612 283
100 3300005843 Ga0068860_100000065 Ga0068860_100000065193 283
101 3300005844 Ga0068862_100000028 Ga0068862_100000028187 283
102 3300006038 Ga0075365_10081713 Ga0075365_100817132 283
103 3300006881 Ga0068865_100348869 Ga0068865_1003488692 283
104 3300006931 Ga0097620_100012772 Ga0097620_1000127728 283
105 3300009011 Ga0105251_10021813 Ga0105251_100218132 283
106 3300009101 Ga0105247_10000032 Ga0105247_1000003268 283
107 3300009177 Ga0105248_10006592 Ga0105248_100065928 283
108 3300009177 Ga0105248_10462417 Ga0105248_104624172 283
109 3300009545 Ga0105237_10000346 Ga0105237_1000034650 283
110 3300009545 Ga0105237_10029995 Ga0105237_100299951 283
111 3300010375 Ga0105239_10015414 Ga0105239_1001541412 283
112 3300010375 Ga0105239_10018741 Ga0105239_100187413 283
113 3300014325 Ga0163163_10034485 Ga0163163_100344854 283
114 3300014969 Ga0157376_10242555 Ga0157376_102425552 283
115 3300021377 Ga0213874_10051810 Ga0213874_100518101 283
116 3300021384 Ga0213876_10024519 Ga0213876_100245192 283
117 3300021388 Ga0213875_10019732 Ga0213875_100197322 283
118 3300025273 Ga0209673_1010017 Ga0209673_10100173 283
119 3300025303 Ga0209051_1000374 Ga0209051_100037417 283
120 3300025303 Ga0209051_1001965 Ga0209051_100196512 283
121 3300025303 Ga0209051_1018352 Ga0209051_10183522 283
122 3300025735 Ga0207713_1054169 Ga0207713_10541692 283
123 3300025900 Ga0207710_10000022 Ga0207710_10000022268 283
124 3300025900 Ga0207710_10000077 Ga0207710_1000007777 283
125 3300025914 Ga0207671_10004495 Ga0207671_1000449516 283
126 3300025914 Ga0207671_10159607 Ga0207671_101596073 283
127 3300025923 Ga0207681_10002378 Ga0207681_100023783 283
128 3300025938 Ga0207704_10319109 Ga0207704_103191092 283
129 3300025941 Ga0207711_10001226 Ga0207711_1000122628 283
130 3300025941 Ga0207711_10246106 Ga0207711_102461062 283
131 3300025961 Ga0207712_10000020 Ga0207712_100000203 283
132 3300025986 Ga0207658_10000284 Ga0207658_100002843 283
133 3300026035 Ga0207703_10143220 Ga0207703_101432202 283
134 3300026041 Ga0207639_10007554 Ga0207639_100075548 283
135 3300026067 Ga0207678_10147874 Ga0207678_101478742 283
136 3300026088 Ga0207641_10004747 Ga0207641_100047472 283
137 3300026142 Ga0207698_10299698 Ga0207698_102996982 283
138 3300028379 Ga0268266_10014275 Ga0268266_100142753 283
139 3300028380 Ga0268265_10000004 Ga0268265_10000004453 283
140 3300028381 Ga0268264_10000024 Ga0268264_10000024463 283
141 3300031251 Ga0265327_10000154 Ga0265327_1000015435 283
142 3300031251 Ga0265327_10012649 Ga0265327_100126492 283
143 3300033545 Ga0316214_1001424 Ga0316214_10014243 283
144 3300037853 Ga0436364_0256774 Ga0436364_0256774_30122_30973 283
145 3300039437 Ga0436365_0233412 Ga0436365_0233412_4355_5206 283
146 3300039450 Ga0436363_0396497 Ga0436363_0396497_269_1120 283
147 3300044683 Ga0466965_0008942 Ga0466965_0008942_109_960 283
148 3300044735 Ga0466968_0002317 Ga0466968_0002317_4134_4985 283
149 3300044765 Ga0466970_0045237 Ga0466970_0045237_904_1755 283
150 3300044842 Ga0466957_0170232 Ga0466957_0170232_401_1252 283
151 3300044901 Ga0466960_0027322 Ga0466960_0027322_373_1224 283
152 3300045049 Ga0466959_0003040 Ga0466959_0003040_8550_9401 283
153 3300045976 Ga0466967_0038324 Ga0466967_0038324_399_1250 283
154 3300045976 Ga0466967_0285638 Ga0466967_0285638_401_1309 283
155 3300045976 Ga0466967_0399946 Ga0466967_0399946_437_1288 283
156 3300046506 Ga0495583_0076654 Ga0495583_0076654_415_1266 283
157 3300046507 Ga0495606_0033245 Ga0495606_0033245_1052_1903 283
158 3300046524 Ga0495648_0006131 Ga0495648_0006131_2390_3241 283
159 3300046616 Ga0495668_0011032 Ga0495668_0011032_2452_3303 283
160 3300046648 Ga0495611_0020246 Ga0495611_0020246_882_1733 283
161 3300047320 Ga0495672_0004146 Ga0495672_0004146_3381_4232 283
162 3300047472 Ga0495686_0003290 Ga0495686_0003290_4351_5202 283
163 3300048903 Ga0496100_0001059 Ga0496100_0001059_8700_9551 283
164 3300048903 Ga0496100_0001991 Ga0496100_0001991_4228_5079 283
165 3300048904 Ga0496101_0000077 Ga0496101_0000077_89106_89957 283
166 3300048904 Ga0496101_0001446 Ga0496101_0001446_7041_7892 283
167 3300048904 Ga0496101_0085716 Ga0496101_0085716_1074_1949 283
168 3300048904 Ga0496101_0288768 Ga0496101_0288768_186_1037 283
169 3300048905 Ga0496102_0000037 Ga0496102_0000037_109260_110111 283
170 3300048905 Ga0496102_0001329 Ga0496102_0001329_1911_2810 283
171 3300048905 Ga0496102_0081312 Ga0496102_0081312_889_1764 283
172 3300048905 Ga0496102_0196689 Ga0496102_0196689_650_1501 283
173 3300048906 Ga0496103_0000004 Ga0496103_0000004_419972_420823 283
174 3300048907 Ga0496104_0071094 Ga0496104_0071094_1599_2450 283
175 3300048908 Ga0496105_0001050 Ga0496105_0001050_7510_8361 283
176 3300048909 Ga0496106_0001022 Ga0496106_0001022_11135_11986 283
177 3300048909 Ga0496106_0002196 Ga0496106_0002196_8484_9335 283
178 3300048910 Ga0496107_0000550 Ga0496107_0000550_2099_2950 283
179 3300048910 Ga0496107_0006939 Ga0496107_0006939_533_1384 283
180 3300048911 Ga0496108_0105763 Ga0496108_0105763_477_1352 283
181 3300048911 Ga0496108_0548863 Ga0496108_0548863_142_993 283
182 3300048916 Ga0496113_0045414 Ga0496113_0045414_432_1283 283
183 3300048917 Ga0496114_0012396 Ga0496114_0012396_2104_2955 283
184 3300048917 Ga0496114_0291171 Ga0496114_0291171_155_1030 283
185 3300048917 Ga0496114_0475949 Ga0496114_0475949_181_1032 283
186 3300048918 Ga0496115_0021467 Ga0496115_0021467_3929_4780 283
187 3300048919 Ga0496116_0000056 Ga0496116_0000056_261872_262723 283
188 3300048920 Ga0496117_0000003 Ga0496117_0000003_1618375_1619226 283
189 3300048921 Ga0496118_0000001 Ga0496118_0000001_1618378_1619229 283
190 3300048922 Ga0496119_0003833 Ga0496119_0003833_11399_12295 283
191 3300048922 Ga0496119_0008492 Ga0496119_0008492_2930_3781 283
192 3300048922 Ga0496119_0046039 Ga0496119_0046039_274_1125 283
193 3300048923 Ga0496120_0001689 Ga0496120_0001689_11396_12292 283
194 3300048923 Ga0496120_0012266 Ga0496120_0012266_2061_2912 283
195 3300048924 Ga0496121_0002761 Ga0496121_0002761_19280_20131 283
196 3300048924 Ga0496121_0007709 Ga0496121_0007709_10103_10984 283
197 3300048928 Ga0496125_0082942 Ga0496125_0082942_279_1166 283
198 3300048929 Ga0496126_0000735 Ga0496126_0000735_19338_20189 283
199 3300048929 Ga0496126_0317292 Ga0496126_0317292_195_1076 283
200 3300049581 Ga0501047_0534254 Ga0501047_0534254_67_954 283
201 3300050492 nmdc:mga0yw44_88065_c1 nmdc:mga0yw44_88065_c1_569_1420 283
202 3300053153 Ga0500616_0007284 Ga0500616_0007284_577_1428 283
203 iso_pu_bacteria 2579778521 2579854230 283
204 iso_pu_bacteria 2619618881 2619853232 283
205 iso_pu_bacteria 2619619003 2620350478 283
206 iso_pu_bacteria 2626541554 2626634269 283
207 iso_pu_bacteria 2773857933 2774903469 283
208 iso_pu_bacteria 8054913762 8054918815 283
209 iso_pu_bacteria 8054920844 8054927623 283

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

45

102

0.98

PF03466

LysR_substrate

LysR substrate binding domain

124

317

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ihs-assembly3.cif.gz_C crystal structure of benm_dbd/catb site 1 dna complex 0.9221 5 88
4pzj-assembly1.cif.gz_A-2 1.60 angstrom resolution crystal structure of a transcriptional regulator of the lysr family from eggerthella lenta dsm 2243 0.9131 4 68
5z4y-assembly1.cif.gz_B crystal structure of pacysb ntd domain with space group p4 0.9081 4 88
4iht-assembly1.cif.gz_A crystal structure of benm_dbd/bena site 1 dna complex 0.9037 5 88
5z4z-assembly2.cif.gz_C-2 crystal structure of pacysb ntd domain with space group c2 0.9027 4 88
ID Description Score Start End Superfamily
af_P36771_5_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9769 4 85 1.10.10.10
af_Q57748_4_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9619 6 88 1.10.10.10
af_Q2FZS7_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9598 5 86 1.10.10.10
af_P77700_7_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9582 8 87 1.10.10.10
af_P9WMF7_1_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9576 5 79 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7W7T453-F1-model_v4 HTH lysR-type domain-containing protein 0.9134 4 88 GO:0003677
GO:0003700
GO:0032993
AF-A0A539DKP0-F1-model_v4 LysR family transcriptional regulator 0.8799 6 88 GO:0000976
GO:0003700
AF-A0A0K2RCL1-F1-model_v4 HTH-type transcriptional regulator GltR 0.8765 3 90 GO:0003700
AF-A0A1H6VZ55-F1-model_v4 Regulatory helix-turn-helix protein, lysR family 0.863 1 79 GO:0003700
AF-A0A0K2RCL1-F1-model_v4 HTH-type transcriptional regulator GltR 0.8496 3 90 GO:0003700

Feature Viewer

pLDDT pTM Quality
86.52 0.66 Medium
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Predicted Structure (AlphaFold2)

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