F319001

General Info

Members Datasets Scaffolds Average Seq Length
209 59 418 137

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10001864|Ga0111539_1000186423
Length 141
Sequence MMQSMPVHRAVFTIRTSEHNQVVDITDQVQEAVRASGLTSGVCAVYTPHATAAIAVNENDDPNIGVDLMRALGKMIPEHDGWLHDRVDDNAAAHIKSAIMGPSESIPVEGGRLALGRWQNVFFCEFDGPRSERRITVTIVG

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
6 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
7 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
8 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
9 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
10 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
11 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
12 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
13 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
14 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
18 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
19 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
20 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
21 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
22 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
23 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
24 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
25 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
26 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
27 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
28 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
31 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
32 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
33 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
34 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
35 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
36 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
37 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
38 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
39 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
40 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
41 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
42 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
43 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
44 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
45 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
46 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
47 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
48 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
49 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
50 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
51 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
52 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
53 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
54 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
55 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
56 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
57 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
58 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
59 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.17
Metatranscriptomes 14.83
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.48
Rhizosphere 79.43
Stem 0
Stem Tuber 0
Unclassified 8.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10001864 3300009094 Bacteria 28005
2 Ga0070658_10072144 3300005327 Bacteria 2829
3 Ga0070679_100158101 3300005530 Bacteria 2241
4 Ga0070665_100282858 3300005548 Bacteria 1661
5 Ga0070704_101378551 3300005549 Bacteria 646
6 Ga0068858_100454144 3300005842 Bacteria 1235
7 Ga0075428_100341416 3300006844 Bacteria 1608
8 Ga0075431_101114658 3300006847 Bacteria 754
9 Ga0111539_10963004 3300009094 Bacteria 992
10 Ga0157378_10646780 3300013297 Bacteria 1073
11 Ga0157375_10249279 3300013308 Bacteria 1936
12 Ga0163163_11182609 3300014325 Unclassified 827
13 Ga0157380_10316146 3300014326 Bacteria 1446
14 Ga0157379_10382052 3300014968 Bacteria 1292
15 Ga0207684_10726019 3300025910 Bacteria 843
16 Ga0207646_10383489 3300025922 Unclassified 1270
17 Ga0268266_10238984 3300028379 Bacteria 1676
18 Ga0265326_10005177 3300028558 Bacteria 4115
19 Ga0265334_10062311 3300028573 Unclassified 1404
20 Ga0265340_10002242 3300031247 Bacteria 11042
21 Ga0316575_10019392 3300031665 Bacteria 2600
22 Ga0316575_10033965 3300031665 Bacteria 2002
23 Ga0316575_10101916 3300031665 Bacteria 1168
24 Ga0316575_10103033 3300031665 Bacteria 1161
25 Ga0316579_10003373 3300031691 Bacteria 6212
26 Ga0316579_10008172 3300031691 Bacteria 4354
27 Ga0316579_10013953 3300031691 Bacteria 3465
28 Ga0316579_10016871 3300031691 Bacteria 3197
29 Ga0316579_10024727 3300031691 Bacteria 2706
30 Ga0316579_10046100 3300031691 Bacteria 2033
31 Ga0316579_10073768 3300031691 Bacteria 1619
32 Ga0316579_10249586 3300031691 Bacteria 858
33 Ga0316579_10366727 3300031691 Bacteria 696
34 Ga0316576_10001820 3300031727 Bacteria 11831
35 Ga0316576_10001998 3300031727 Bacteria 11417
36 Ga0316576_10004929 3300031727 Bacteria 8079
37 Ga0316576_10014455 3300031727 Bacteria 5274
38 Ga0316576_10019119 3300031727 Bacteria 4690
39 Ga0316576_10022210 3300031727 Bacteria 4404
40 Ga0316576_10027958 3300031727 Bacteria 3969
41 Ga0316576_10063112 3300031727 Bacteria 2719
42 Ga0316576_10174191 3300031727 Bacteria 1623
43 Ga0316576_10187878 3300031727 Bacteria 1558
44 Ga0316576_10562737 3300031727 Unclassified 835
45 Ga0316576_10888172 3300031727 Bacteria 639
46 Ga0316578_10000165 3300031728 Bacteria 17785
47 Ga0316578_10001714 3300031728 Bacteria 9150
48 Ga0316578_10003516 3300031728 Bacteria 7190
49 Ga0316578_10010059 3300031728 Bacteria 4894
50 Ga0316578_10016995 3300031728 Bacteria 3950
51 Ga0316578_10031354 3300031728 Bacteria 3028
52 Ga0316578_10033974 3300031728 Bacteria 2925
53 Ga0316578_10131960 3300031728 Bacteria 1503
54 Ga0316578_10172400 3300031728 Bacteria 1304
55 Ga0316578_10196139 3300031728 Bacteria 1216
56 Ga0316578_10529310 3300031728 Bacteria 693
57 Ga0316577_10000009 3300031733 Bacteria 40287
58 Ga0316577_10006666 3300031733 Bacteria 6118
59 Ga0316577_10035782 3300031733 Bacteria 2776
60 Ga0316577_10064278 3300031733 Bacteria 2048
61 Ga0316577_10118905 3300031733 Bacteria 1485
62 Ga0316577_10150486 3300031733 Bacteria 1311
63 Ga0316577_10192924 3300031733 Bacteria 1151
64 Ga0316577_10235102 3300031733 Bacteria 1036
65 Ga0316577_10269533 3300031733 Bacteria 963
66 Ga0316577_10432294 3300031733 Bacteria 748
67 Ga0316583_10002573 3300032133 Bacteria 6320
68 Ga0316583_10004244 3300032133 Bacteria 5107
69 Ga0316583_10016979 3300032133 Bacteria 2619
70 Ga0316583_10034279 3300032133 Unclassified 1801
71 Ga0316583_10047998 3300032133 Bacteria 1504
72 Ga0316583_10204989 3300032133 Bacteria 684
73 Ga0316585_10000378 3300032137 Bacteria 10299
74 Ga0316585_10009343 3300032137 Bacteria 2859
75 Ga0316585_10029429 3300032137 Bacteria 1720
76 Ga0316580_10000396 3300032139 Bacteria 9859
77 Ga0316580_10001586 3300032139 Bacteria 6005
78 Ga0316580_10005230 3300032139 Unclassified 3780
79 Ga0316580_10007649 3300032139 Bacteria 3221
80 Ga0316580_10020610 3300032139 Bacteria 2032
81 Ga0316580_10027201 3300032139 Unclassified 1768
82 Ga0316580_10208917 3300032139 Bacteria 602
83 Ga0316593_10000515 3300032168 Bacteria 7156
84 Ga0316593_10000594 3300032168 Bacteria 6850
85 Ga0316593_10001063 3300032168 Bacteria 5742
86 Ga0316593_10003030 3300032168 Bacteria 4096
87 Ga0316593_10027708 3300032168 Unclassified 1820
88 Ga0316593_10032296 3300032168 Bacteria 1710
89 Ga0316593_10064846 3300032168 Bacteria 1254
90 Ga0316593_10090327 3300032168 Bacteria 1078
91 Ga0316593_10095234 3300032168 Bacteria 1051
92 Ga0316593_10115601 3300032168 Bacteria 960
93 Ga0316593_10116734 3300032168 Unclassified 956
94 Ga0316593_10116976 3300032168 Bacteria 955
95 Ga0316593_10220307 3300032168 Bacteria 705
96 Ga0316592_1005998 3300033524 Bacteria 2326
97 Ga0316592_1116998 3300033524 Unclassified 618
98 Ga0316586_1002985 3300033527 Bacteria 2174
99 Ga0316586_1074215 3300033527 Bacteria 629
100 Ga0316588_1000362 3300033528 Bacteria 5896
101 Ga0316588_1000415 3300033528 Bacteria 5658
102 Ga0316588_1006379 3300033528 Bacteria 2355
103 Ga0316588_1027760 3300033528 Bacteria 1317
104 Ga0316588_1048094 3300033528 Bacteria 1031
105 Ga0316587_1003134 3300033529 Bacteria 2287
106 Ga0316587_1005013 3300033529 Bacteria 1960
107 Ga0316587_1047000 3300033529 Unclassified 786
108 Ga0316587_1047653 3300033529 Bacteria 781
109 Ga0316596_1000481 3300033541 Bacteria 6767
110 Ga0316596_1001157 3300033541 Bacteria 5170
111 Ga0316596_1003068 3300033541 Bacteria 3630
112 Ga0316596_1050559 3300033541 Bacteria 1099
113 Ga0316596_1103089 3300033541 Bacteria 772
114 Ga0373962_0087258 3300035242 Bacteria 956
115 Ga0316574_0000035 3300035398 Bacteria 34371
116 Ga0316574_0018058 3300035398 Bacteria 4140
117 Ga0316574_0022333 3300035398 Bacteria 3766
118 Ga0316574_0023432 3300035398 Bacteria 3685
119 Ga0316574_0031545 3300035398 Bacteria 3214
120 Ga0316574_0043291 3300035398 Bacteria 2782
121 Ga0316574_0077456 3300035398 Bacteria 2107
122 Ga0316574_0141117 3300035398 Bacteria 1552
123 Ga0316574_0236741 3300035398 Unclassified 1167
124 Ga0316574_0505110 3300035398 Bacteria 754
125 Ga0316574_0594366 3300035398 Unclassified 684
126 Ga0316574_0717227 3300035398 Bacteria 612
127 Ga0316574_0737011 3300035398 Bacteria 603
128 Ga0316574_0792934 3300035398 Bacteria 577
129 Ga0316574_0807727 3300035398 Bacteria 571
130 Ga0373931_0113999 3300035691 Bacteria 1537
131 Ga0316582_0000913 3300036647 Bacteria 12125
132 Ga0316582_0014442 3300036647 Bacteria 4481
133 Ga0316582_0018056 3300036647 Bacteria 4097
134 Ga0316582_0030830 3300036647 Bacteria 3271
135 Ga0316582_0136957 3300036647 Bacteria 1648
136 Ga0316582_0151822 3300036647 Bacteria 1566
137 Ga0316582_0187928 3300036647 Bacteria 1407
138 Ga0316582_0257509 3300036647 Bacteria 1196
139 Ga0316582_0283329 3300036647 Bacteria 1138
140 Ga0316584_0005390 3300036712 Bacteria 8582
141 Ga0316584_0007745 3300036712 Bacteria 7368
142 Ga0316584_0017349 3300036712 Bacteria 5173
143 Ga0316584_0017668 3300036712 Bacteria 5134
144 Ga0316584_0026250 3300036712 Bacteria 4280
145 Ga0316584_0033133 3300036712 Bacteria 3825
146 Ga0316584_0057212 3300036712 Bacteria 2919
147 Ga0316584_0059448 3300036712 Bacteria 2862
148 Ga0316584_0075047 3300036712 Bacteria 2535
149 Ga0316584_0086610 3300036712 Bacteria 2344
150 Ga0316584_0099945 3300036712 Bacteria 2172
151 Ga0316584_0182418 3300036712 Bacteria 1553
152 Ga0316584_0201684 3300036712 Bacteria 1467
153 Ga0316584_0871090 3300036712 Bacteria 608
154 Ga0395900_1080487 3300037418 Unclassified 720
155 Ga0316581_0026522 3300037588 Bacteria 1730
156 Ga0316581_0154680 3300037588 Bacteria 707
157 Ga0400484_19354 3300038725 Bacteria 30119
158 Ga0400484_25007 3300038725 Bacteria 5366
159 Ga0400484_37779 3300038725 Bacteria 3365
160 Ga0400484_39316 3300038725 Bacteria 39081
161 Ga0400490_13684 3300038726 Bacteria 6882
162 Ga0400490_32027 3300038726 Bacteria 17530
163 Ga0400490_35742 3300038726 Bacteria 24393
164 Ga0400491_29499 3300038727 Unclassified 1258
165 Ga0400485_19058 3300038735 Bacteria 3374
166 Ga0400488_14722 3300038741 Bacteria 1982
167 Ga0400488_35772 3300038741 Bacteria 4023
168 Ga0400488_40041 3300038741 Bacteria 27128
169 Ga0400488_48147 3300038741 Bacteria 8170
170 Ga0400488_55239 3300038741 Bacteria 5663
171 Ga0400488_55577 3300038741 Unclassified 1886
172 Ga0400488_60348 3300038741 Bacteria 9954
173 Ga0400486_07264 3300038742 Unclassified 1326
174 Ga0400486_15350 3300038742 Bacteria 8620
175 Ga0400486_24397 3300038742 Bacteria 28696
176 Ga0400486_31801 3300038742 Bacteria 23450
177 Ga0400483_001920 3300039062 Bacteria 7524
178 Ga0400483_025708 3300039062 Bacteria 2050
179 Ga0400483_062892 3300039062 Bacteria 5191
180 Ga0400483_081151 3300039062 Bacteria 10294
181 Ga0400483_109173 3300039062 Bacteria 8020
182 Ga0400483_132948 3300039062 Bacteria 11296
183 Ga0400483_178482 3300039062 Bacteria 9725
184 Ga0400483_248264 3300039062 Bacteria 12401
185 Ga0400483_269353 3300039062 Bacteria 9611
186 Ga0400489_17843 3300039093 Bacteria 9096
187 Ga0400489_92497 3300039093 Bacteria 1883
188 Ga0400487_01301 3300039110 Bacteria 43520
189 Ga0400487_09227 3300039110 Bacteria 3256
190 Ga0400487_10510 3300039110 Bacteria 18428
191 Ga0400487_17096 3300039110 Bacteria 1020
192 Ga0400487_23161 3300039110 Bacteria 7251
193 Ga0400487_40128 3300039110 Bacteria 3701
194 Ga0400487_43858 3300039110 Bacteria 2101
195 Ga0400487_46178 3300039110 Bacteria 4749
196 Ga0400487_59096 3300039110 Bacteria 1240
197 Ga0400487_59925 3300039110 Bacteria 2216
198 Ga0400487_66537 3300039110 Bacteria 19965
199 Ga0453684_0501027 3300044712 Bacteria 1344
200 Ga0453684_0652171 3300044712 Bacteria 1148
201 Ga0495669_0342830 3300046684 Bacteria 722
202 Ga0496104_0169025 3300048907 Bacteria 2097
203 Ga0501041_0644790 3300049577 Bacteria 677
204 Ga0501070_1058484 3300049586 Bacteria 627
205 Ga0501071_0337221 3300049587 Bacteria 1146
206 Ga0501080_0496258 3300049742 Unclassified 1091
207 Ga0501081_0905734 3300049743 Bacteria 665
208 nmdc:mga08y16_1220_c1 3300050511 Bacteria 25434
209 nmdc:mga0rr50_65453_c1 3300050513 Bacteria 2753
210 Ga0111539_10001864
211 Ga0070658_10072144
212 Ga0070679_100158101
213 Ga0070665_100282858
214 Ga0070704_101378551
215 Ga0068858_100454144
216 Ga0075428_100341416
217 Ga0075431_101114658
218 Ga0111539_10963004
219 Ga0157378_10646780
220 Ga0157375_10249279
221 Ga0163163_11182609
222 Ga0157380_10316146
223 Ga0157379_10382052
224 Ga0207684_10726019
225 Ga0207646_10383489
226 Ga0268266_10238984
227 Ga0265326_10005177
228 Ga0265334_10062311
229 Ga0265340_10002242
230 Ga0316575_10019392
231 Ga0316575_10033965
232 Ga0316575_10101916
233 Ga0316575_10103033
234 Ga0316579_10003373
235 Ga0316579_10008172
236 Ga0316579_10013953
237 Ga0316579_10016871
238 Ga0316579_10024727
239 Ga0316579_10046100
240 Ga0316579_10073768
241 Ga0316579_10249586
242 Ga0316579_10366727
243 Ga0316576_10001820
244 Ga0316576_10001998
245 Ga0316576_10004929
246 Ga0316576_10014455
247 Ga0316576_10019119
248 Ga0316576_10022210
249 Ga0316576_10027958
250 Ga0316576_10063112
251 Ga0316576_10174191
252 Ga0316576_10187878
253 Ga0316576_10562737
254 Ga0316576_10888172
255 Ga0316578_10000165
256 Ga0316578_10001714
257 Ga0316578_10003516
258 Ga0316578_10010059
259 Ga0316578_10016995
260 Ga0316578_10031354
261 Ga0316578_10033974
262 Ga0316578_10131960
263 Ga0316578_10172400
264 Ga0316578_10196139
265 Ga0316578_10529310
266 Ga0316577_10000009
267 Ga0316577_10006666
268 Ga0316577_10035782
269 Ga0316577_10064278
270 Ga0316577_10118905
271 Ga0316577_10150486
272 Ga0316577_10192924
273 Ga0316577_10235102
274 Ga0316577_10269533
275 Ga0316577_10432294
276 Ga0316583_10002573
277 Ga0316583_10004244
278 Ga0316583_10016979
279 Ga0316583_10034279
280 Ga0316583_10047998
281 Ga0316583_10204989
282 Ga0316585_10000378
283 Ga0316585_10009343
284 Ga0316585_10029429
285 Ga0316580_10000396
286 Ga0316580_10001586
287 Ga0316580_10005230
288 Ga0316580_10007649
289 Ga0316580_10020610
290 Ga0316580_10027201
291 Ga0316580_10208917
292 Ga0316593_10000515
293 Ga0316593_10000594
294 Ga0316593_10001063
295 Ga0316593_10003030
296 Ga0316593_10027708
297 Ga0316593_10032296
298 Ga0316593_10064846
299 Ga0316593_10090327
300 Ga0316593_10095234
301 Ga0316593_10115601
302 Ga0316593_10116734
303 Ga0316593_10116976
304 Ga0316593_10220307
305 Ga0316592_1005998
306 Ga0316592_1116998
307 Ga0316586_1002985
308 Ga0316586_1074215
309 Ga0316588_1000362
310 Ga0316588_1000415
311 Ga0316588_1006379
312 Ga0316588_1027760
313 Ga0316588_1048094
314 Ga0316587_1003134
315 Ga0316587_1005013
316 Ga0316587_1047000
317 Ga0316587_1047653
318 Ga0316596_1000481
319 Ga0316596_1001157
320 Ga0316596_1003068
321 Ga0316596_1050559
322 Ga0316596_1103089
323 Ga0373962_0087258
324 Ga0316574_0000035
325 Ga0316574_0018058
326 Ga0316574_0022333
327 Ga0316574_0023432
328 Ga0316574_0031545
329 Ga0316574_0043291
330 Ga0316574_0077456
331 Ga0316574_0141117
332 Ga0316574_0236741
333 Ga0316574_0505110
334 Ga0316574_0594366
335 Ga0316574_0717227
336 Ga0316574_0737011
337 Ga0316574_0792934
338 Ga0316574_0807727
339 Ga0373931_0113999
340 Ga0316582_0000913
341 Ga0316582_0014442
342 Ga0316582_0018056
343 Ga0316582_0030830
344 Ga0316582_0136957
345 Ga0316582_0151822
346 Ga0316582_0187928
347 Ga0316582_0257509
348 Ga0316582_0283329
349 Ga0316584_0005390
350 Ga0316584_0007745
351 Ga0316584_0017349
352 Ga0316584_0017668
353 Ga0316584_0026250
354 Ga0316584_0033133
355 Ga0316584_0057212
356 Ga0316584_0059448
357 Ga0316584_0075047
358 Ga0316584_0086610
359 Ga0316584_0099945
360 Ga0316584_0182418
361 Ga0316584_0201684
362 Ga0316584_0871090
363 Ga0395900_1080487
364 Ga0316581_0026522
365 Ga0316581_0154680
366 Ga0400484_19354
367 Ga0400484_25007
368 Ga0400484_37779
369 Ga0400484_39316
370 Ga0400490_13684
371 Ga0400490_32027
372 Ga0400490_35742
373 Ga0400491_29499
374 Ga0400485_19058
375 Ga0400488_14722
376 Ga0400488_35772
377 Ga0400488_40041
378 Ga0400488_48147
379 Ga0400488_55239
380 Ga0400488_55577
381 Ga0400488_60348
382 Ga0400486_07264
383 Ga0400486_15350
384 Ga0400486_24397
385 Ga0400486_31801
386 Ga0400483_001920
387 Ga0400483_025708
388 Ga0400483_062892
389 Ga0400483_081151
390 Ga0400483_109173
391 Ga0400483_132948
392 Ga0400483_178482
393 Ga0400483_248264
394 Ga0400483_269353
395 Ga0400489_17843
396 Ga0400489_92497
397 Ga0400487_01301
398 Ga0400487_09227
399 Ga0400487_10510
400 Ga0400487_17096
401 Ga0400487_23161
402 Ga0400487_40128
403 Ga0400487_43858
404 Ga0400487_46178
405 Ga0400487_59096
406 Ga0400487_59925
407 Ga0400487_66537
408 Ga0453684_0501027
409 Ga0453684_0652171
410 Ga0495669_0342830
411 Ga0496104_0169025
412 Ga0501041_0644790
413 Ga0501070_1058484
414 Ga0501071_0337221
415 Ga0501080_0496258
416 Ga0501081_0905734
417 nmdc:mga08y16_1220_c1
418 nmdc:mga0rr50_65453_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01894

UPF0047

Uncharacterised protein family UPF0047

24

139

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ve0-assembly1.cif.gz_A crystal structure of uncharacterized protein st2072 from sulfolobus tokodaii 0.9139 1 118
1vmh-assembly1.cif.gz_A crystal structure of an uncharacterized conserved protein yjbq/upf0047 family, ortholog yugu b.subtilis (ca_c0907) from clostridium acetobutylicum at 1.31 a resolution 0.9006 1 123
2p6h-assembly1.cif.gz_A crystal structure of hypothetical protein ape1520 from aeropyrum pernix k1 0.8856 1 125
1xbf-assembly1.cif.gz_C x-ray structure northeast structural genomics consortium target car10 from c. acetobutylicum 0.879 1 123
2cu5-assembly1.cif.gz_C crystal structure of the conserved hypothetical protein tt1486 from thermus thermophilus hb8 0.8709 1 123
ID Description Score Start End Superfamily
1ve0A00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.9064 1 118 2.60.120.460
2p6hB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.8856 1 125 2.60.120.460
af_P9WFP9_1_132_2.60.120.460 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.8823 1 123 2.60.120.460
1xbfB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.8672 1 123 2.60.120.460
1vphC00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.8615 1 120 2.60.120.460
ID Description Score Start End GO Terms
AF-A0A1F6I7Q9-F1-model_v4 Secondary thiamine-phosphate synthase enzyme 0.9548 1 121
AF-A0A2V6RX91-F1-model_v4 YjbQ family protein 0.9514 1 126
AF-A0A837INK4-F1-model_v4 Secondary thiamine-phosphate synthase enzyme 0.9383 1 125 GO:0016020
AF-A0A1G1WWC4-F1-model_v4 Secondary thiamine-phosphate synthase enzyme 0.9355 1 127
AF-M0CZ04-F1-model_v4 Secondary thiamine-phosphate synthase enzyme 0.9354 1 123

Map