F318925

General Info

Members Datasets Scaffolds Average Seq Length
209 156 418 159

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10110238|Ga0070717_101102382
Length 179
Sequence VSGILLGQLLSESSGAVTLGRVKLSGGVEWALHCCVVLTAAAEPVPASRLAQLHDVSATYLAKQLQALSRAGLVQSTQGKSGGYVLTRSPQEITMLDVVEAIDGPGSPFTCTEIRQRGPMATPPEACTAPCPIARAMSDADQAWRATLQRISIADLCRSVDGGSGADALGQVGAWLRAR

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
38 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
39 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
40 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
41 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
42 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
43 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
44 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
45 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
46 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
47 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
48 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
49 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
53 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
54 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
55 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
56 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
62 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
65 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
66 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
67 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
68 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
69 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
70 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
71 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
72 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
73 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
74 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
75 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
78 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
79 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
80 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
81 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
82 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
83 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
84 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
85 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
86 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
87 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
96 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
99 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
102 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
103 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
104 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
105 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
123 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
124 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
125 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
126 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
127 2508501039 Frankia saprophytica CN3 Isolate Nodule
128 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
129 2643221548 Streptomyces sp. Root55 Isolate Unclassified
130 2643221578 Streptomyces sp. Root63 Isolate Unclassified
131 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
132 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
133 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
134 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
135 2687453737 Frankia sp. BMG5.36 Isolate Nodule
136 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
137 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
138 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
139 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
140 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
141 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
142 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
143 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
144 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
145 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
146 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
147 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
148 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
149 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
150 8002775197 Frankia nepalensis CN7 Isolate Nodule
151 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
152 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
153 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
154 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
155 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
156 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.17
Metatranscriptomes 0.48
Isolates 14.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.39
Nodule 2.87
Rhizoplane 0.96
Rhizosphere 73.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10110238 3300006028 Bacteria 2347
2 rootL2_10004213 3300003322 Bacteria 4547
3 rootL2_10073759 3300003322 Bacteria 1243
4 Ga0006562J51391_1115449 3300003578 Bacteria 1198
5 Ga0070658_10626245 3300005327 Bacteria 933
6 Ga0070682_100256294 3300005337 Bacteria 1264
7 Ga0070668_100053347 3300005347 Bacteria 3118
8 Ga0070671_100001069 3300005355 Bacteria 20212
9 Ga0070667_100258653 3300005367 Bacteria 1558
10 Ga0070714_100001478 3300005435 Bacteria 17134
11 Ga0070714_100162075 3300005435 Bacteria 2024
12 Ga0070714_100563851 3300005435 Bacteria 1091
13 Ga0070711_100006850 3300005439 Bacteria 6899
14 Ga0070711_101315795 3300005439 Bacteria 627
15 Ga0070663_100155628 3300005455 Bacteria 1756
16 Ga0070663_100389267 3300005455 Bacteria 1137
17 Ga0070685_10549923 3300005466 Bacteria 824
18 Ga0070684_100112009 3300005535 Bacteria 2448
19 Ga0070665_100006798 3300005548 Bacteria 11628
20 Ga0070665_100009185 3300005548 Bacteria 10012
21 Ga0070665_100201638 3300005548 Bacteria 1990
22 Ga0070665_100234063 3300005548 Bacteria 1837
23 Ga0070665_100307729 3300005548 Bacteria 1588
24 Ga0070664_100756604 3300005564 Bacteria 907
25 Ga0068864_101532471 3300005618 Bacteria 670
26 Ga0068860_100156092 3300005843 Bacteria 2199
27 Ga0081540_1151310 3300005983 Bacteria 915
28 Ga0070717_10135675 3300006028 Bacteria 2119
29 Ga0070712_100119894 3300006175 Bacteria 1978
30 Ga0068871_101620882 3300006358 Bacteria 613
31 Ga0068865_101079365 3300006881 Bacteria 706
32 Ga0105245_11635946 3300009098 Bacteria 696
33 Ga0105248_10000018 3300009177 Bacteria 294894
34 Ga0163163_10583829 3300014325 Bacteria 1181
35 Ga0207693_10257753 3300025915 Bacteria 1368
36 Ga0207663_10060991 3300025916 Bacteria 2392
37 Ga0207687_10517020 3300025927 Bacteria 998
38 Ga0207664_10027956 3300025929 Bacteria 4282
39 Ga0207644_10001360 3300025931 Bacteria 15731
40 Ga0207711_10001165 3300025941 Bacteria 25045
41 Ga0207679_10550632 3300025945 Bacteria 1035
42 Ga0207658_10135834 3300025986 Bacteria 1983
43 Ga0207678_10177427 3300026067 Bacteria 1819
44 Ga0207678_10921812 3300026067 Bacteria 773
45 Ga0207641_10241505 3300026088 Bacteria 1683
46 Ga0268266_10016115 3300028379 Bacteria 6390
47 Ga0268266_10044101 3300028379 Bacteria 3811
48 Ga0268266_10177215 3300028379 Bacteria 1939
49 Ga0268264_10131684 3300028381 Bacteria 2218
50 Ga0307517_10035685 3300028786 Bacteria 5622
51 Ga0307515_10006101 3300028794 Bacteria 24231
52 Ga0307511_10028711 3300030521 Bacteria 5041
53 Ga0307512_10078407 3300030522 Bacteria 2394
54 Ga0307513_10049925 3300031456 Bacteria 4528
55 Ga0307509_10017473 3300031507 Bacteria 8254
56 Ga0307508_10066516 3300031616 Bacteria 3173
57 Ga0307508_10145198 3300031616 Bacteria 1976
58 Ga0307514_10217640 3300031649 Bacteria 1176
59 Ga0307514_10231523 3300031649 Bacteria 1119
60 Ga0307405_11049580 3300031731 Bacteria 698
61 Ga0307413_10696520 3300031824 Bacteria 843
62 Ga0307413_11491280 3300031824 Bacteria 598
63 Ga0307413_11816559 3300031824 Bacteria 546
64 Ga0307518_10002309 3300031838 Bacteria 13941
65 Ga0307518_10089272 3300031838 Bacteria 2219
66 Ga0307518_10327636 3300031838 Bacteria 910
67 Ga0307410_10143649 3300031852 Bacteria 1769
68 Ga0307410_10254901 3300031852 Bacteria 1366
69 Ga0307407_10153355 3300031903 Bacteria 1500
70 Ga0307409_100114716 3300031995 Bacteria 2267
71 Ga0307409_100324569 3300031995 Bacteria 1442
72 Ga0307416_100107758 3300032002 Bacteria 2446
73 Ga0307414_10342879 3300032004 Bacteria 1280
74 Ga0307411_11060219 3300032005 Bacteria 729
75 Ga0307415_100164265 3300032126 Bacteria 1725
76 Ga0307507_10009321 3300033179 Bacteria 13138
77 Ga0307507_10020421 3300033179 Bacteria 7418
78 Ga0307507_10073306 3300033179 Bacteria 3079
79 Ga0307510_10008554 3300033180 Bacteria 12200
80 Ga0373935_0036136 3300035692 Bacteria 3087
81 Ga0466963_0230376 3300044694 Bacteria 1298
82 Ga0466958_0121581 3300045836 Bacteria 1635
83 Ga0466958_0582572 3300045836 Bacteria 727
84 Ga0466967_0914784 3300045976 Bacteria 873
85 Ga0495592_0007906 3300046454 Bacteria 7976
86 Ga0495592_0009147 3300046454 Bacteria 7454
87 Ga0495603_0629031 3300046455 Bacteria 614
88 Ga0495629_0005403 3300046459 Bacteria 9527
89 Ga0495629_0026308 3300046459 Bacteria 4134
90 Ga0495629_0041055 3300046459 Bacteria 3255
91 Ga0495651_0023447 3300046462 Bacteria 4797
92 Ga0495651_0447132 3300046462 Bacteria 836
93 Ga0495582_0145489 3300046473 Bacteria 1344
94 Ga0495662_0003716 3300046476 Bacteria 7689
95 Ga0495585_0005877 3300046492 Bacteria 7685
96 Ga0495585_0164511 3300046492 Bacteria 1150
97 Ga0495594_0070797 3300046499 Bacteria 1939
98 Ga0495606_0004521 3300046507 Bacteria 13842
99 Ga0495628_0060600 3300046516 Bacteria 2969
100 Ga0495652_0219352 3300046529 Bacteria 1430
101 Ga0495640_0014873 3300046533 Bacteria 5870
102 Ga0495640_0087778 3300046533 Bacteria 2056
103 Ga0495586_0189946 3300046535 Bacteria 1163
104 Ga0495587_0004895 3300046536 Bacteria 8782
105 Ga0495587_0480600 3300046536 Bacteria 687
106 Ga0495622_0097019 3300046557 Bacteria 1352
107 Ga0495667_0104520 3300046559 Bacteria 1831
108 Ga0495668_0008526 3300046616 Bacteria 6383
109 Ga0495668_0263248 3300046616 Bacteria 944
110 Ga0495634_0015156 3300046642 Bacteria 5541
111 Ga0495634_0102932 3300046642 Bacteria 1843
112 Ga0495611_0031387 3300046648 Bacteria 2338
113 Ga0495625_0001850 3300046660 Bacteria 24136
114 Ga0495625_0147919 3300046660 Bacteria 1580
115 Ga0495635_0002971 3300046663 Bacteria 11634
116 Ga0495588_0009071 3300046674 Bacteria 4583
117 Ga0495588_0492990 3300046674 Bacteria 642
118 Ga0495657_0002488 3300046675 Bacteria 15491
119 Ga0495623_0214516 3300046679 Bacteria 1100
120 Ga0495646_0002179 3300046680 Bacteria 11931
121 Ga0495658_0351176 3300046683 Bacteria 937
122 Ga0495613_0001226 3300046689 Bacteria 19608
123 Ga0495613_0133289 3300046689 Bacteria 1778
124 Ga0495613_0237008 3300046689 Bacteria 1277
125 Ga0495613_0549830 3300046689 Bacteria 773
126 Ga0495624_0363154 3300046690 Bacteria 871
127 Ga0495671_0033572 3300046692 Bacteria 2613
128 Ga0495600_0232182 3300046809 Bacteria 1177
129 Ga0495581_0023977 3300047315 Bacteria 3535
130 Ga0495604_0004151 3300047317 Bacteria 11503
131 Ga0495604_0023522 3300047317 Bacteria 4915
132 Ga0495604_0043581 3300047317 Bacteria 3512
133 Ga0495674_0062835 3300047319 Bacteria 3232
134 Ga0495676_0009620 3300047321 Bacteria 8796
135 Ga0495676_0092789 3300047321 Bacteria 2253
136 Ga0495675_0295429 3300047444 Bacteria 963
137 Ga0495681_0002534 3300047470 Bacteria 13012
138 Ga0495593_0003493 3300047673 Bacteria 9405
139 Ga0495614_0000979 3300048089 Bacteria 12148
140 Ga0495614_0006359 3300048089 Bacteria 5306
141 Ga0495626_0000134 3300048091 Bacteria 93639
142 Ga0496102_0045435 3300048905 Bacteria 3988
143 Ga0496116_0000678 3300048919 Bacteria 44229
144 Ga0496117_0002351 3300048920 Bacteria 24169
145 Ga0496118_0010040 3300048921 Bacteria 9437
146 Ga0496118_0028734 3300048921 Bacteria 4676
147 Ga0496119_0017418 3300048922 Bacteria 5404
148 Ga0496120_0137943 3300048923 Bacteria 1241
149 Ga0496126_0000006 3300048929 Bacteria 798804
150 Ga0496126_0499826 3300048929 Bacteria 972
151 Ga0501031_0099058 3300049568 Bacteria 1902
152 Ga0501032_0021827 3300049569 Bacteria 4446
153 Ga0501034_0059398 3300049571 Bacteria 3841
154 Ga0501034_0114581 3300049571 Bacteria 2684
155 Ga0501036_0022146 3300049572 Bacteria 5345
156 Ga0501036_0271031 3300049572 Bacteria 1421
157 Ga0501037_0164590 3300049573 Bacteria 1580
158 Ga0501038_0013219 3300049574 Bacteria 7529
159 Ga0501038_0057353 3300049574 Bacteria 3344
160 Ga0501043_0016866 3300049579 Bacteria 5725
161 Ga0501047_0015405 3300049581 Bacteria 7284
162 Ga0501047_0102926 3300049581 Bacteria 2735
163 Ga0501070_0338819 3300049586 Bacteria 1222
164 Ga0501070_0515321 3300049586 Bacteria 960
165 Ga0501070_1438129 3300049586 Bacteria 523
166 Ga0501072_0444670 3300049588 Bacteria 1027
167 Ga0501035_0021021 3300049822 Bacteria 5999
168 Ga0501035_0208176 3300049822 Bacteria 1674
169 Ga0501035_0679440 3300049822 Bacteria 832
170 Ga0501044_0029285 3300049823 Bacteria 5806
171 Ga0501044_0646956 3300049823 Bacteria 946
172 Ga0501045_0162108 3300049824 Bacteria 1665
173 Ga0495655_0192929 3300053083 Bacteria 662
174 Ga0495619_0045863 3300053085 Bacteria 2873
175 Ga0500578_0281943 3300053086 Bacteria 991
176 Ga0500640_153097 3300053095 Bacteria 877
177 Ga0500560_034146 3300053107 Bacteria 1558
178 Ga0500573_0111398 3300053140 Bacteria 1531
179 Ga0500624_124880 3300053157 Bacteria 542
180 2508673947 2508501039 Bacteria 9978592
181 2586060379 2585427649 Bacteria 9053857
182 2643765373 2643221548 Bacteria 8053412
183 2643903612 2643221578 Bacteria 9213798
184 2644409774 2643221673 Bacteria 9196637
185 2644442199 2643221678 Bacteria 9540101
186 2644462556 2643221682 Bacteria 6743283
187 2676198982 2675902999 Bacteria 9438463
188 2689962337 2687453737 Bacteria 11203906
189 2731905871 2731639228 Bacteria 4187555
190 2774843560 2773857921 Bacteria 9435764
191 2793983789 2791355406 Bacteria 11364898
192 2809590641 2808606522 Bacteria 9488490
193 2867350412 2867346516 Bacteria 7608576
194 2912764457 2912757875 Bacteria 7940295
195 2915359157 2915358134 Bacteria 6050864
196 2915770615 2915768154 Bacteria 8424322
197 2918507714 2918501144 Bacteria 8668083
198 2919469862 2919468124 Bacteria 9133025
199 2929223249 2929219909 Bacteria 6984360
200 2946052982 2946045630 Bacteria 8527308
201 3006325646 3006321560 Bacteria 8247479
202 8001786043 8001781756 Bacteria 9586736
203 8002783011 8002775197 Bacteria 10728764
204 8047899290 8047893842 Bacteria 11723082
205 8048359629 8048356638 Bacteria 11044339
206 8048376250 8048369669 Bacteria 11666822
207 8048385310 8048379754 Bacteria 11877923
208 8055070990 8055066027 Bacteria 9479577
209 8055416056 8055412473 Bacteria 6257500
210 Ga0070717_10110238
211 rootL2_10004213
212 rootL2_10073759
213 Ga0006562J51391_1115449
214 Ga0070658_10626245
215 Ga0070682_100256294
216 Ga0070668_100053347
217 Ga0070671_100001069
218 Ga0070667_100258653
219 Ga0070714_100001478
220 Ga0070714_100162075
221 Ga0070714_100563851
222 Ga0070711_100006850
223 Ga0070711_101315795
224 Ga0070663_100155628
225 Ga0070663_100389267
226 Ga0070685_10549923
227 Ga0070684_100112009
228 Ga0070665_100006798
229 Ga0070665_100009185
230 Ga0070665_100201638
231 Ga0070665_100234063
232 Ga0070665_100307729
233 Ga0070664_100756604
234 Ga0068864_101532471
235 Ga0068860_100156092
236 Ga0081540_1151310
237 Ga0070717_10135675
238 Ga0070712_100119894
239 Ga0068871_101620882
240 Ga0068865_101079365
241 Ga0105245_11635946
242 Ga0105248_10000018
243 Ga0163163_10583829
244 Ga0207693_10257753
245 Ga0207663_10060991
246 Ga0207687_10517020
247 Ga0207664_10027956
248 Ga0207644_10001360
249 Ga0207711_10001165
250 Ga0207679_10550632
251 Ga0207658_10135834
252 Ga0207678_10177427
253 Ga0207678_10921812
254 Ga0207641_10241505
255 Ga0268266_10016115
256 Ga0268266_10044101
257 Ga0268266_10177215
258 Ga0268264_10131684
259 Ga0307517_10035685
260 Ga0307515_10006101
261 Ga0307511_10028711
262 Ga0307512_10078407
263 Ga0307513_10049925
264 Ga0307509_10017473
265 Ga0307508_10066516
266 Ga0307508_10145198
267 Ga0307514_10217640
268 Ga0307514_10231523
269 Ga0307405_11049580
270 Ga0307413_10696520
271 Ga0307413_11491280
272 Ga0307413_11816559
273 Ga0307518_10002309
274 Ga0307518_10089272
275 Ga0307518_10327636
276 Ga0307410_10143649
277 Ga0307410_10254901
278 Ga0307407_10153355
279 Ga0307409_100114716
280 Ga0307409_100324569
281 Ga0307416_100107758
282 Ga0307414_10342879
283 Ga0307411_11060219
284 Ga0307415_100164265
285 Ga0307507_10009321
286 Ga0307507_10020421
287 Ga0307507_10073306
288 Ga0307510_10008554
289 Ga0373935_0036136
290 Ga0466963_0230376
291 Ga0466958_0121581
292 Ga0466958_0582572
293 Ga0466967_0914784
294 Ga0495592_0007906
295 Ga0495592_0009147
296 Ga0495603_0629031
297 Ga0495629_0005403
298 Ga0495629_0026308
299 Ga0495629_0041055
300 Ga0495651_0023447
301 Ga0495651_0447132
302 Ga0495582_0145489
303 Ga0495662_0003716
304 Ga0495585_0005877
305 Ga0495585_0164511
306 Ga0495594_0070797
307 Ga0495606_0004521
308 Ga0495628_0060600
309 Ga0495652_0219352
310 Ga0495640_0014873
311 Ga0495640_0087778
312 Ga0495586_0189946
313 Ga0495587_0004895
314 Ga0495587_0480600
315 Ga0495622_0097019
316 Ga0495667_0104520
317 Ga0495668_0008526
318 Ga0495668_0263248
319 Ga0495634_0015156
320 Ga0495634_0102932
321 Ga0495611_0031387
322 Ga0495625_0001850
323 Ga0495625_0147919
324 Ga0495635_0002971
325 Ga0495588_0009071
326 Ga0495588_0492990
327 Ga0495657_0002488
328 Ga0495623_0214516
329 Ga0495646_0002179
330 Ga0495658_0351176
331 Ga0495613_0001226
332 Ga0495613_0133289
333 Ga0495613_0237008
334 Ga0495613_0549830
335 Ga0495624_0363154
336 Ga0495671_0033572
337 Ga0495600_0232182
338 Ga0495581_0023977
339 Ga0495604_0004151
340 Ga0495604_0023522
341 Ga0495604_0043581
342 Ga0495674_0062835
343 Ga0495676_0009620
344 Ga0495676_0092789
345 Ga0495675_0295429
346 Ga0495681_0002534
347 Ga0495593_0003493
348 Ga0495614_0000979
349 Ga0495614_0006359
350 Ga0495626_0000134
351 Ga0496102_0045435
352 Ga0496116_0000678
353 Ga0496117_0002351
354 Ga0496118_0010040
355 Ga0496118_0028734
356 Ga0496119_0017418
357 Ga0496120_0137943
358 Ga0496126_0000006
359 Ga0496126_0499826
360 Ga0501031_0099058
361 Ga0501032_0021827
362 Ga0501034_0059398
363 Ga0501034_0114581
364 Ga0501036_0022146
365 Ga0501036_0271031
366 Ga0501037_0164590
367 Ga0501038_0013219
368 Ga0501038_0057353
369 Ga0501043_0016866
370 Ga0501047_0015405
371 Ga0501047_0102926
372 Ga0501070_0338819
373 Ga0501070_0515321
374 Ga0501070_1438129
375 Ga0501072_0444670
376 Ga0501035_0021021
377 Ga0501035_0208176
378 Ga0501035_0679440
379 Ga0501044_0029285
380 Ga0501044_0646956
381 Ga0501045_0162108
382 Ga0495655_0192929
383 Ga0495619_0045863
384 Ga0500578_0281943
385 Ga0500640_153097
386 Ga0500560_034146
387 Ga0500573_0111398
388 Ga0500624_124880
389 2508673947
390 2586060379
391 2643765373
392 2643903612
393 2644409774
394 2644442199
395 2644462556
396 2676198982
397 2689962337
398 2731905871
399 2774843560
400 2793983789
401 2809590641
402 2867350412
403 2912764457
404 2915359157
405 2915770615
406 2918507714
407 2919469862
408 2929223249
409 2946052982
410 3006325646
411 8001786043
412 8002783011
413 8047899290
414 8048359629
415 8048376250
416 8048385310
417 8055070990
418 8055416056

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02082

Rrf2

Iron-dependent Transcriptional regulator

24

159

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4chu-assembly1.cif.gz_B e. coli iscr-dna complex 0.9321 37 116
2y75-assembly1.cif.gz_E the structure of cymr (yrzc) the global cysteine regulator of b. subtilis 0.93 36 119
4chu-assembly1.cif.gz_A e. coli iscr-dna complex 0.9239 36 117
4cic-assembly1.cif.gz_B t. potens iscr 0.9201 35 118
1xd7-assembly1.cif.gz_A-2 crystal structure of a putative dna binding protein 0.9201 41 117
ID Description Score Start End Superfamily
4hobA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.948 43 89 1.10.10.10
4hobC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9406 43 89 1.10.10.10
af_Q58948_3_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9286 43 102 1.10.10.10
af_Q5NE14_88_145_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9238 41 100 1.10.10.10
af_P16528_22_97_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9211 37 100 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1M5S487-F1-model_v4 Transcriptional regulator, BadM/Rrf2 family 0.9809 41 117 GO:0003700
GO:0005829
AF-E0ICP4-F1-model_v4 Transcriptional regulator, BadM/Rrf2 family 0.9735 41 118 GO:0003700
GO:0005829
AF-B9Y9W0-F1-model_v4 Transcriptional regulator, Rrf2 family 0.9734 38 117 GO:0003700
GO:0005829
AF-A0A149USP7-F1-model_v4 Transcriptional regulator 0.97 38 115 GO:0003700
GO:0005829
AF-A0A7V4FZ06-F1-model_v4 Rrf2 family transcriptional regulator 0.9686 37 118 GO:0003700
GO:0005829

Map