F318549

General Info

Members Datasets Scaffolds Average Seq Length
209 117 418 559

Family's Representative Sequence

Representative Sequence 3300001989|JGI24739J22299_10023723|JGI24739J22299_100237232
Length 607
Sequence MPRVASLFLPHLAIERLRRVGRMCGKAPSSAPPDAGPRPRFAEAVHDNPGPCSVPRGGGWRPGARWARDGTAGGRPSQAAIDALPVHQRPTMREMGRRSDHAEHPFKAMPSDEGDGAASTLSLSWASLWGKPTVLVLRTGQRDVITAACPVALDLGLRPGMVAAHARALVADLDVKDAEPEADRALLDRLAVHAARHWTPTASVSGEDGLWLDLTGTTHLFGGEERFCRQLLAFLKRLGLTARIAIAGTAGAAHALARFGREGMTLLAAGQEAQAMADLPLAALRLEPEALASAARFGLERVADLYPMSRGPLARRLGLKTVERLDQARGLVAEPIIPVVPAEAPLVTRHLLEPIGTVESITQVMSDLVDDLVILLLQRGIGARTVLLTAVRVDGEPQRLGIGASRATRDARHIKRMFGLRLAQVEPGLGIETMHLVVPHHEPLGAEALGALLETSRKGRDLAPLVDQLSARAGEAALFRLSAHESDVPERAARRIPPLNLPRAWPCWKRPVRLLRRPELLSNVVALMPDHPPRRFTWRRQDYRVVAGDGPERIHGEWWRTSREQWAVRDYFRVEAEGGQRFWLFRRGDGIDPETGDLSWHMHGLFG

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
65 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
66 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
67 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
68 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
69 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
70 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
71 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
72 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
73 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
74 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
75 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
76 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
77 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
82 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
83 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
84 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
87 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
90 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
91 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
98 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
99 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
100 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
101 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
102 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
103 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
104 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
105 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
106 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
107 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
108 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
109 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
112 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
113 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
114 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
115 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
116 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
117 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.65
Metatranscriptomes 0
Isolates 3.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.71
Nodule 0
Rhizoplane 1.91
Rhizosphere 46.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10023723 3300001989 Bacteria 2166
2 JGI24739J22299_10005357 3300001989 Bacteria 4884
3 JGI24735J21928_10000301 3300002067 Bacteria 17218
4 Ga0055525_1000206 3300003759 Bacteria 67423
5 Ga0070677_10003543 3300005333 Bacteria 5036
6 Ga0070668_100002824 3300005347 Bacteria 12786
7 Ga0070671_100000065 3300005355 Bacteria 71901
8 Ga0070671_100041600 3300005355 Bacteria 3820
9 Ga0070667_100000103 3300005367 Bacteria 107232
10 Ga0068867_100014074 3300005459 Bacteria 5667
11 Ga0068855_100004298 3300005563 Bacteria 17411
12 Ga0068857_100059458 3300005577 Bacteria 3395
13 Ga0068854_100002682 3300005578 Bacteria 11030
14 Ga0068856_100000710 3300005614 Bacteria 36130
15 Ga0068856_100012959 3300005614 Bacteria 8073
16 Ga0068852_100002236 3300005616 Bacteria 13276
17 Ga0068861_100014503 3300005719 Bacteria 5532
18 Ga0068863_100000377 3300005841 Bacteria 45378
19 Ga0068863_100061906 3300005841 Bacteria 3539
20 Ga0068860_100016988 3300005843 Bacteria 7092
21 Ga0068860_100022766 3300005843 Bacteria 6059
22 Ga0068860_100029002 3300005843 Bacteria 5324
23 Ga0068862_100011838 3300005844 Bacteria 7203
24 Ga0075365_10004306 3300006038 Bacteria 7512
25 Ga0075368_10000011 3300006042 Bacteria 44307
26 Ga0075368_10000048 3300006042 Bacteria 28872
27 Ga0075368_10000149 3300006042 Bacteria 18659
28 Ga0075363_100000043 3300006048 Bacteria 24265
29 Ga0075363_100000328 3300006048 Bacteria 14214
30 Ga0075364_10000007 3300006051 Bacteria 73806
31 Ga0075364_10000663 3300006051 Bacteria 17856
32 Ga0075362_10000027 3300006177 Bacteria 58346
33 Ga0075362_10001246 3300006177 Bacteria 8033
34 Ga0075367_10000010 3300006178 Bacteria 43233
35 Ga0075367_10000374 3300006178 Bacteria 16144
36 Ga0075367_10000776 3300006178 Bacteria 12525
37 Ga0075369_10000204 3300006186 Bacteria 17338
38 Ga0075369_10000412 3300006186 Bacteria 12944
39 Ga0075366_10028329 3300006195 Bacteria 3288
40 Ga0075370_10000024 3300006353 Bacteria 52434
41 Ga0075370_10001913 3300006353 Bacteria 9370
42 Ga0105248_10002650 3300009177 Bacteria 19866
43 Ga0105238_10020282 3300009551 Bacteria 6767
44 Ga0105148_100201 3300009978 Bacteria 8734
45 Ga0105239_10000476 3300010375 Bacteria 58559
46 Ga0105239_10006414 3300010375 Bacteria 13654
47 Ga0105239_10105496 3300010375 Bacteria 3121
48 Ga0157370_10000228 3300013104 Bacteria 71656
49 Ga0157370_10003278 3300013104 Bacteria 19076
50 Ga0157369_10000336 3300013105 Bacteria 62349
51 Ga0163161_10029216 3300017792 Bacteria 3919
52 Ga0213875_10019269 3300021388 Bacteria 3284
53 Ga0209147_100392 3300025229 Bacteria 30038
54 Ga0209147_100438 3300025229 Bacteria 26646
55 Ga0209563_100106 3300025230 Bacteria 146256
56 Ga0209233_1000044 3300025261 Bacteria 489783
57 Ga0209257_1000768 3300025304 Bacteria 47870
58 Ga0207713_1000283 3300025735 Bacteria 58960
59 Ga0207682_10010666 3300025893 Bacteria 3594
60 Ga0207647_10002404 3300025904 Bacteria 14208
61 Ga0207649_10000254 3300025920 Bacteria 42776
62 Ga0207681_10004190 3300025923 Bacteria 8920
63 Ga0207694_10026692 3300025924 Bacteria 4396
64 Ga0207644_10000045 3300025931 Bacteria 105495
65 Ga0207711_10005813 3300025941 Bacteria 10422
66 Ga0207667_10001696 3300025949 Bacteria 27713
67 Ga0207668_10000541 3300025972 Bacteria 23747
68 Ga0207640_10000135 3300025981 Bacteria 54466
69 Ga0207658_10000080 3300025986 Bacteria 107226
70 Ga0207702_10009551 3300026078 Bacteria 8142
71 Ga0207641_10000014 3300026088 Bacteria 336170
72 Ga0207641_10005579 3300026088 Bacteria 10724
73 Ga0207648_10002863 3300026089 Bacteria 18260
74 Ga0207674_10165064 3300026116 Bacteria 2169
75 Ga0207698_10021208 3300026142 Bacteria 4488
76 Ga0207698_10063126 3300026142 Bacteria 2897
77 Ga0209813_10000139 3300027866 Bacteria 25151
78 Ga0209813_10000143 3300027866 Bacteria 24903
79 Ga0209813_10000209 3300027866 Bacteria 18051
80 Ga0268264_10019959 3300028381 Bacteria 5475
81 Ga0268264_10034511 3300028381 Bacteria 4162
82 Ga0307408_100000496 3300031548 Bacteria 34230
83 Ga0307408_100007826 3300031548 Bacteria 7063
84 Ga0307405_10001491 3300031731 Bacteria 9899
85 Ga0307405_10001981 3300031731 Bacteria 8859
86 Ga0307405_10023184 3300031731 Bacteria 3523
87 Ga0307410_10031760 3300031852 Bacteria 3392
88 Ga0307412_10000467 3300031911 Bacteria 24202
89 Ga0307412_10006315 3300031911 Bacteria 6695
90 Ga0307412_10028637 3300031911 Bacteria 3487
91 Ga0307412_10046978 3300031911 Bacteria 2832
92 Ga0307416_100002088 3300032002 Bacteria 11271
93 Ga0307416_100137984 3300032002 Bacteria 2210
94 Ga0307414_10001868 3300032004 Bacteria 10882
95 Ga0436364_1340934 3300037853 Bacteria 15178
96 Ga0237819_00364 3300038705 Bacteria 16129
97 Ga0495627_000274 3300046453 Bacteria 52104
98 Ga0495627_001230 3300046453 Bacteria 15955
99 Ga0495627_001347 3300046453 Bacteria 14818
100 Ga0495650_0002984 3300046471 Bacteria 12811
101 Ga0495596_0000483 3300046500 Bacteria 25240
102 Ga0495596_0002691 3300046500 Bacteria 9370
103 Ga0495610_0000043 3300046512 Bacteria 158045
104 Ga0495610_0000086 3300046512 Bacteria 109119
105 Ga0495610_0000165 3300046512 Bacteria 73467
106 Ga0495610_0000213 3300046512 Bacteria 62796
107 Ga0495610_0000525 3300046512 Bacteria 38499
108 Ga0495610_0003526 3300046512 Bacteria 12126
109 Ga0495648_0003994 3300046524 Bacteria 12764
110 Ga0495648_0010686 3300046524 Bacteria 6973
111 Ga0495663_0000595 3300046525 Bacteria 12661
112 Ga0495654_0006492 3300046530 Bacteria 6641
113 Ga0495668_0022255 3300046616 Bacteria 3624
114 Ga0495681_0000025 3300047470 Bacteria 148216
115 Ga0495681_0002622 3300047470 Bacteria 12783
116 Ga0495686_0000764 3300047472 Bacteria 42431
117 Ga0495615_0000033 3300048090 Bacteria 45796
118 Ga0495626_0002254 3300048091 Bacteria 13807
119 Ga0496102_0000117 3300048905 Bacteria 114037
120 Ga0496103_0000076 3300048906 Bacteria 113209
121 Ga0496105_0063431 3300048908 Bacteria 3048
122 Ga0496105_0139491 3300048908 Bacteria 1996
123 Ga0496116_0000078 3300048919 Bacteria 227712
124 Ga0496116_0000189 3300048919 Bacteria 122859
125 Ga0496116_0002618 3300048919 Bacteria 18691
126 Ga0496116_0006164 3300048919 Bacteria 10964
127 Ga0496116_0032308 3300048919 Bacteria 3732
128 Ga0496117_0000201 3300048920 Bacteria 117679
129 Ga0496117_0006890 3300048920 Bacteria 11274
130 Ga0496118_0000097 3300048921 Bacteria 160837
131 Ga0496118_0001686 3300048921 Bacteria 32279
132 Ga0496118_0007490 3300048921 Bacteria 11551
133 Ga0496118_0017221 3300048921 Bacteria 6588
134 Ga0496118_0022945 3300048921 Bacteria 5437
135 Ga0496119_0008696 3300048922 Bacteria 8873
136 Ga0496119_0015184 3300048922 Bacteria 5959
137 Ga0496119_0083641 3300048922 Bacteria 1832
138 Ga0496121_0001383 3300048924 Bacteria 41083
139 Ga0496121_0001568 3300048924 Bacteria 38102
140 Ga0496122_0000083 3300048925 Bacteria 208744
141 Ga0496122_0000094 3300048925 Bacteria 202047
142 Ga0496122_0002229 3300048925 Bacteria 28209
143 Ga0496122_0004544 3300048925 Bacteria 17105
144 Ga0496123_0000116 3300048926 Bacteria 161699
145 Ga0496123_0000356 3300048926 Bacteria 85832
146 Ga0496123_0001929 3300048926 Bacteria 27049
147 Ga0496123_0004204 3300048926 Bacteria 15365
148 Ga0496124_0000011 3300048927 Bacteria 524145
149 Ga0496124_0000202 3300048927 Bacteria 117650
150 Ga0496124_0000554 3300048927 Bacteria 63220
151 Ga0496124_0005737 3300048927 Bacteria 13822
152 Ga0496124_0022322 3300048927 Bacteria 5803
153 Ga0496125_0000285 3300048928 Bacteria 100029
154 Ga0496125_0000705 3300048928 Bacteria 55380
155 Ga0496125_0008803 3300048928 Bacteria 10497
156 Ga0496125_0041662 3300048928 Bacteria 3923
157 Ga0496126_0000051 3300048929 Bacteria 313169
158 Ga0496126_0000058 3300048929 Bacteria 272530
159 Ga0496126_0005756 3300048929 Bacteria 14020
160 Ga0496126_0011668 3300048929 Bacteria 9065
161 Ga0501032_0000525 3300049569 Bacteria 31183
162 Ga0501032_0064436 3300049569 Bacteria 2453
163 Ga0501033_0001021 3300049570 Bacteria 25442
164 Ga0501043_0044659 3300049579 Bacteria 3485
165 Ga0501043_0163002 3300049579 Bacteria 1742
166 Ga0501047_0000640 3300049581 Bacteria 36732
167 Ga0501047_0001078 3300049581 Bacteria 27187
168 Ga0501035_0000627 3300049822 Bacteria 38848
169 Ga0501044_0000406 3300049823 Bacteria 53102
170 nmdc:mga03683_316_c1 3300050489 Bacteria 14132
171 nmdc:mga03683_39_c1 3300050489 Bacteria 62423
172 nmdc:mga03n38_3_c1 3300050490 Bacteria 77674
173 nmdc:mga03n38_67_c1 3300050490 Bacteria 22276
174 nmdc:mga00v17_20_c1 3300050491 Bacteria 110672
175 nmdc:mga00v17_29_c1 3300050491 Bacteria 89620
176 nmdc:mga0yw44_16936_c1 3300050492 Bacteria 3951
177 nmdc:mga0yw44_66_c1 3300050492 Bacteria 37953
178 nmdc:mga0k408_15777_c1 3300050493 Bacteria 4182
179 nmdc:mga0k408_74387_c1 3300050493 Bacteria 1985
180 nmdc:mga06z11_23_c1 3300050494 Bacteria 67588
181 nmdc:mga06z11_661_c1 3300050494 Bacteria 12540
182 nmdc:mga06z11_6852_c1 3300050494 Bacteria 4658
183 nmdc:mga06z11_70_c1 3300050494 Bacteria 42581
184 nmdc:mga04h51_15_c1 3300050495 Bacteria 76646
185 nmdc:mga04h51_179_c1 3300050495 Bacteria 17844
186 nmdc:mga04h51_59_c1 3300050495 Bacteria 35125
187 nmdc:mga07m45_10766_c1 3300050496 Bacteria 4787
188 nmdc:mga07m45_209_c3 3300050496 Bacteria 17950
189 nmdc:mga07m45_24_c1 3300050496 Bacteria 110671
190 nmdc:mga07m45_3178_c1 3300050496 Bacteria 7885
191 nmdc:mga07m45_5_c2 3300050496 Bacteria 297012
192 nmdc:mga0sz30_331_c1 3300050516 Bacteria 18107
193 nmdc:mga0sz30_37_c3 3300050516 Bacteria 27761
194 Ga0500592_000010 3300053116 Bacteria 76714
195 Ga0500592_000055 3300053116 Bacteria 33352
196 Ga0500607_001183 3300053121 Bacteria 24020
197 Ga0500559_0001465 3300053136 Bacteria 13356
198 Ga0500559_0007190 3300053136 Bacteria 4956
199 Ga0500568_0001427 3300053139 Bacteria 15505
200 Ga0500616_0000124 3300053153 Bacteria 135532
201 Ga0500627_0000036 3300053158 Bacteria 79400
202 Ga0500627_0005323 3300053158 Bacteria 4266
203 2643823214 2643221560 Bacteria 4801179
204 2644042580 2643221606 Bacteria 5588032
205 2819553580 2818991438 Bacteria 5793701
206 2819712849 2818991466 Bacteria 4748179
207 2819714852 2818991466 Bacteria 4748179
208 2919710939 2919709256 Bacteria 4318106
209 8054305584 8054302542 Bacteria 5698134
210 JGI24739J22299_10023723
211 JGI24739J22299_10005357
212 JGI24735J21928_10000301
213 Ga0055525_1000206
214 Ga0070677_10003543
215 Ga0070668_100002824
216 Ga0070671_100000065
217 Ga0070671_100041600
218 Ga0070667_100000103
219 Ga0068867_100014074
220 Ga0068855_100004298
221 Ga0068857_100059458
222 Ga0068854_100002682
223 Ga0068856_100000710
224 Ga0068856_100012959
225 Ga0068852_100002236
226 Ga0068861_100014503
227 Ga0068863_100000377
228 Ga0068863_100061906
229 Ga0068860_100016988
230 Ga0068860_100022766
231 Ga0068860_100029002
232 Ga0068862_100011838
233 Ga0075365_10004306
234 Ga0075368_10000011
235 Ga0075368_10000048
236 Ga0075368_10000149
237 Ga0075363_100000043
238 Ga0075363_100000328
239 Ga0075364_10000007
240 Ga0075364_10000663
241 Ga0075362_10000027
242 Ga0075362_10001246
243 Ga0075367_10000010
244 Ga0075367_10000374
245 Ga0075367_10000776
246 Ga0075369_10000204
247 Ga0075369_10000412
248 Ga0075366_10028329
249 Ga0075370_10000024
250 Ga0075370_10001913
251 Ga0105248_10002650
252 Ga0105238_10020282
253 Ga0105148_100201
254 Ga0105239_10000476
255 Ga0105239_10006414
256 Ga0105239_10105496
257 Ga0157370_10000228
258 Ga0157370_10003278
259 Ga0157369_10000336
260 Ga0163161_10029216
261 Ga0213875_10019269
262 Ga0209147_100392
263 Ga0209147_100438
264 Ga0209563_100106
265 Ga0209233_1000044
266 Ga0209257_1000768
267 Ga0207713_1000283
268 Ga0207682_10010666
269 Ga0207647_10002404
270 Ga0207649_10000254
271 Ga0207681_10004190
272 Ga0207694_10026692
273 Ga0207644_10000045
274 Ga0207711_10005813
275 Ga0207667_10001696
276 Ga0207668_10000541
277 Ga0207640_10000135
278 Ga0207658_10000080
279 Ga0207702_10009551
280 Ga0207641_10000014
281 Ga0207641_10005579
282 Ga0207648_10002863
283 Ga0207674_10165064
284 Ga0207698_10021208
285 Ga0207698_10063126
286 Ga0209813_10000139
287 Ga0209813_10000143
288 Ga0209813_10000209
289 Ga0268264_10019959
290 Ga0268264_10034511
291 Ga0307408_100000496
292 Ga0307408_100007826
293 Ga0307405_10001491
294 Ga0307405_10001981
295 Ga0307405_10023184
296 Ga0307410_10031760
297 Ga0307412_10000467
298 Ga0307412_10006315
299 Ga0307412_10028637
300 Ga0307412_10046978
301 Ga0307416_100002088
302 Ga0307416_100137984
303 Ga0307414_10001868
304 Ga0436364_1340934
305 Ga0237819_00364
306 Ga0495627_000274
307 Ga0495627_001230
308 Ga0495627_001347
309 Ga0495650_0002984
310 Ga0495596_0000483
311 Ga0495596_0002691
312 Ga0495610_0000043
313 Ga0495610_0000086
314 Ga0495610_0000165
315 Ga0495610_0000213
316 Ga0495610_0000525
317 Ga0495610_0003526
318 Ga0495648_0003994
319 Ga0495648_0010686
320 Ga0495663_0000595
321 Ga0495654_0006492
322 Ga0495668_0022255
323 Ga0495681_0000025
324 Ga0495681_0002622
325 Ga0495686_0000764
326 Ga0495615_0000033
327 Ga0495626_0002254
328 Ga0496102_0000117
329 Ga0496103_0000076
330 Ga0496105_0063431
331 Ga0496105_0139491
332 Ga0496116_0000078
333 Ga0496116_0000189
334 Ga0496116_0002618
335 Ga0496116_0006164
336 Ga0496116_0032308
337 Ga0496117_0000201
338 Ga0496117_0006890
339 Ga0496118_0000097
340 Ga0496118_0001686
341 Ga0496118_0007490
342 Ga0496118_0017221
343 Ga0496118_0022945
344 Ga0496119_0008696
345 Ga0496119_0015184
346 Ga0496119_0083641
347 Ga0496121_0001383
348 Ga0496121_0001568
349 Ga0496122_0000083
350 Ga0496122_0000094
351 Ga0496122_0002229
352 Ga0496122_0004544
353 Ga0496123_0000116
354 Ga0496123_0000356
355 Ga0496123_0001929
356 Ga0496123_0004204
357 Ga0496124_0000011
358 Ga0496124_0000202
359 Ga0496124_0000554
360 Ga0496124_0005737
361 Ga0496124_0022322
362 Ga0496125_0000285
363 Ga0496125_0000705
364 Ga0496125_0008803
365 Ga0496125_0041662
366 Ga0496126_0000051
367 Ga0496126_0000058
368 Ga0496126_0005756
369 Ga0496126_0011668
370 Ga0501032_0000525
371 Ga0501032_0064436
372 Ga0501033_0001021
373 Ga0501043_0044659
374 Ga0501043_0163002
375 Ga0501047_0000640
376 Ga0501047_0001078
377 Ga0501035_0000627
378 Ga0501044_0000406
379 nmdc:mga03683_316_c1
380 nmdc:mga03683_39_c1
381 nmdc:mga03n38_3_c1
382 nmdc:mga03n38_67_c1
383 nmdc:mga00v17_20_c1
384 nmdc:mga00v17_29_c1
385 nmdc:mga0yw44_16936_c1
386 nmdc:mga0yw44_66_c1
387 nmdc:mga0k408_15777_c1
388 nmdc:mga0k408_74387_c1
389 nmdc:mga06z11_23_c1
390 nmdc:mga06z11_661_c1
391 nmdc:mga06z11_6852_c1
392 nmdc:mga06z11_70_c1
393 nmdc:mga04h51_15_c1
394 nmdc:mga04h51_179_c1
395 nmdc:mga04h51_59_c1
396 nmdc:mga07m45_10766_c1
397 nmdc:mga07m45_209_c3
398 nmdc:mga07m45_24_c1
399 nmdc:mga07m45_3178_c1
400 nmdc:mga07m45_5_c2
401 nmdc:mga0sz30_331_c1
402 nmdc:mga0sz30_37_c3
403 Ga0500592_000010
404 Ga0500592_000055
405 Ga0500607_001183
406 Ga0500559_0001465
407 Ga0500559_0007190
408 Ga0500568_0001427
409 Ga0500616_0000124
410 Ga0500627_0000036
411 Ga0500627_0005323
412 2643823214
413 2644042580
414 2819553580
415 2819712849
416 2819714852
417 2919710939
418 8054305584

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00817

IMS

impB/mucB/samB family

117

258

0.89

PF20114

DUF6504

Domain of unknown function (DUF6504)

517

605

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8faz-assembly1.cif.gz_C cryo-em structure of the human bcdx2 complex 0.7328 276 326
4dez-assembly1.cif.gz_A structure of msdpo4 0.7234 124 326
8ouz-assembly1.cif.gz_A human rad51b-rad51c-rad51d-xrcc2 (bcdx2) complex, 2.2 a resolution 0.7113 276 333
5uxa-assembly1.cif.gz_A crystal structure of macrolide 2'-phosphotransferase mphb from escherichia coli 0.7089 542 582
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.7088 125 297
ID Description Score Start End Superfamily
4f50A02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9292 125 175 3.40.1170.60
3mfhA02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.924 127 173 3.40.1170.60
1k1qB01 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9192 126 175 3.40.1170.60
af_O74944_370_477_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9147 338 437 3.30.1490.100
af_P9WNT3_241_350_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9015 340 440 3.30.1490.100
ID Description Score Start End GO Terms
AF-A0A371YW04-F1-model_v4 DNA polymerase Y-family little finger domain-containing protein 0.9946 342 432 GO:0003684
GO:0006281
AF-A0A371YW04-F1-model_v4 DNA polymerase Y-family little finger domain-containing protein 0.9431 342 432 GO:0003684
GO:0006281
AF-V6F037-F1-model_v4 UmuC domain-containing protein 0.9316 2 334 GO:0006281
AF-A3WZ00-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9303 340 439 GO:0003684
GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7W0MLN0-F1-model_v4 DNA polymerase Y family protein 0.9245 2 249 GO:0006281

Map