F318495

General Info

Members Datasets Scaffolds Average Seq Length
208 142 408 293

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857481737|2857485338
Length 342
Sequence AGRGPLDEDGLPPLPPLPPLDGEPGDGRVRDGVVRPEPLRQHLPSLPDSLIPAVEAAPGLARVALHAGWHTAQWGVKAYVRTGRRIVKAVADPEEVGLLAREATQAMATVGELARTVSEGTSLSAALQQAADALEELREAPEPGRQVHPSGALEHQATPASLRERGAHLLERSRDVWDDEHAHPAYERILDELAPDEARVLLLLLEKGPQPSVDVRTGGPIGMVNSQLIAPGLTMIGARAGCRYLDQVPSYLNNLFRLGLVWFSRESLRDPMEYQVVEAQPDVLAALHSVKFAKVVRRSIHLTPFGEDFCRTCLLDEQTAATAFPSHATPPAAEAGDAPSHR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
65 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
75 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
76 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
77 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
78 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
79 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
80 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
81 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
82 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
87 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
91 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
119 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
120 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
121 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
122 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
123 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
124 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
127 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
128 2643221561 Nocardioides sp. Root151 Isolate Unclassified
129 2643221576 Nocardioides sp. Root614 Isolate Unclassified
130 2643221590 Nocardioides sp. Root682 Isolate Unclassified
131 2643221604 Nocardioides sp. Root190 Isolate Unclassified
132 2643221617 Nocardioides sp. Root79 Isolate Unclassified
133 2643221620 Nocardioides sp. Root240 Isolate Unclassified
134 2643221696 Nocardioides sp. Root140 Isolate Unclassified
135 2738541305 Nocardioides sp. CF167 Isolate Unclassified
136 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
137 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
138 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
139 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
140 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
141 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
142 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 91.83
Metatranscriptomes 0.48
Isolates 7.69

Biome Distribution

Category Percentage (%)
Aerial Root 0.96
Bulb 0
Endosphere 8.17
Nodule 0
Rhizoplane 1.92
Rhizosphere 80.77
Stem 0
Stem Tuber 0
Unclassified 0.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10091351 3300005327 Bacteria 2509
2 Ga0070682_100062115 3300005337 Bacteria 2365
3 Ga0070682_100161503 3300005337 Bacteria 1548
4 Ga0068868_100079814 3300005338 Bacteria 2621
5 Ga0070660_100319228 3300005339 Bacteria 1276
6 Ga0070660_100342516 3300005339 Bacteria 1230
7 Ga0070689_100207293 3300005340 Bacteria 1603
8 Ga0070692_10000567 3300005345 Bacteria 11574
9 Ga0070675_100078680 3300005354 Bacteria 2747
10 Ga0070674_100045088 3300005356 Bacteria 3012
11 Ga0070688_100066982 3300005365 Bacteria 2286
12 Ga0070659_100076380 3300005366 Bacteria 2671
13 Ga0070714_100022250 3300005435 Bacteria 5196
14 Ga0070701_10001778 3300005438 Bacteria 8137
15 Ga0070700_100003232 3300005441 Bacteria 8378
16 Ga0070662_100031269 3300005457 Bacteria 3735
17 Ga0068867_100001469 3300005459 Bacteria 16336
18 Ga0070698_100001048 3300005471 Bacteria 30448
19 Ga0068853_100147757 3300005539 Bacteria 2114
20 Ga0070672_100001159 3300005543 Bacteria 16111
21 Ga0070664_100037765 3300005564 Bacteria 4062
22 Ga0068857_100298062 3300005577 Bacteria 1486
23 Ga0068854_100113541 3300005578 Bacteria 2046
24 Ga0070702_100025862 3300005615 Bacteria 3149
25 Ga0068861_100027928 3300005719 Bacteria 4115
26 Ga0068870_10004723 3300005840 Bacteria 5885
27 Ga0068860_100000504 3300005843 Bacteria 48482
28 Ga0081539_10127342 3300005985 Bacteria 1256
29 Ga0075365_10006337 3300006038 Bacteria 6500
30 Ga0075365_10059308 3300006038 Bacteria 2550
31 Ga0075365_10120177 3300006038 Bacteria 1812
32 Ga0075363_100012125 3300006048 Bacteria 4146
33 Ga0075363_100098772 3300006048 Bacteria 1614
34 Ga0075364_10017560 3300006051 Bacteria 4473
35 Ga0075364_10129437 3300006051 Bacteria 1693
36 Ga0075370_10024224 3300006353 Bacteria 3351
37 Ga0075370_10125788 3300006353 Bacteria 1494
38 Ga0075370_10148401 3300006353 Bacteria 1374
39 Ga0068865_100006349 3300006881 Bacteria 7204
40 Ga0111539_10269328 3300009094 Bacteria 1983
41 Ga0105245_10228900 3300009098 Bacteria 1797
42 Ga0105243_10010996 3300009148 Bacteria 6843
43 Ga0105248_10033729 3300009177 Bacteria 5721
44 Ga0105237_10245234 3300009545 Bacteria 1793
45 Ga0105249_10252695 3300009553 Bacteria 1748
46 Ga0105239_10007696 3300010375 Bacteria 12337
47 Ga0105239_10124786 3300010375 Bacteria 2861
48 Ga0157371_10083246 3300013102 Bacteria 2265
49 Ga0157372_10086764 3300013307 Bacteria 3551
50 Ga0163163_10091348 3300014325 Bacteria 3059
51 Ga0163163_10256520 3300014325 Bacteria 1799
52 Ga0157380_10125117 3300014326 Bacteria 2184
53 Ga0157380_10176936 3300014326 Bacteria 1871
54 Ga0157377_10016281 3300014745 Bacteria 3821
55 Ga0157376_10270235 3300014969 Bacteria 1597
56 Ga0206353_11131274 3300020082 Bacteria 2439
57 Ga0207643_10004420 3300025908 Bacteria 7560
58 Ga0207705_10162687 3300025909 Bacteria 1677
59 Ga0207705_10307936 3300025909 Bacteria 1216
60 Ga0207662_10048180 3300025918 Bacteria 2524
61 Ga0207657_10157266 3300025919 Bacteria 1848
62 Ga0207657_10257680 3300025919 Bacteria 1389
63 Ga0207659_10067642 3300025926 Bacteria 2595
64 Ga0207687_10190489 3300025927 Bacteria 1596
65 Ga0207664_10472249 3300025929 Bacteria 1121
66 Ga0207706_10070779 3300025933 Bacteria 3068
67 Ga0207669_10034490 3300025937 Bacteria 2868
68 Ga0207661_10135124 3300025944 Bacteria 2117
69 Ga0207679_10018361 3300025945 Bacteria 4685
70 Ga0207712_10175437 3300025961 Bacteria 1679
71 Ga0207678_10015739 3300026067 Bacteria 6647
72 Ga0207708_10000622 3300026075 Bacteria 27260
73 Ga0207708_10032593 3300026075 Bacteria 3956
74 Ga0207648_10000550 3300026089 Bacteria 42009
75 Ga0207675_100006152 3300026118 Bacteria 11402
76 Ga0207698_10096419 3300026142 Bacteria 2437
77 Ga0268264_10000547 3300028381 Bacteria 47223
78 Ga0316181_1215507 3300030744 Bacteria 1944
79 Ga0316182_1210953 3300030745 Bacteria 5377
80 Ga0307405_10358922 3300031731 Bacteria 1127
81 Ga0307410_10380402 3300031852 Bacteria 1136
82 Ga0307407_10095123 3300031903 Bacteria 1836
83 Ga0307412_10014410 3300031911 Bacteria 4662
84 Ga0307409_100161598 3300031995 Bacteria 1960
85 Ga0307409_100345875 3300031995 Bacteria 1401
86 Ga0307411_10357668 3300032005 Bacteria 1193
87 Ga0395901_0041234 3300038443 Bacteria 4783
88 Ga0395901_0089774 3300038443 Bacteria 3216
89 Ga0436363_1226748 3300039450 Bacteria 1914
90 Ga0439465_0015419 3300041413 Bacteria 2385
91 Ga0451839_0179642 3300041496 Bacteria 920
92 Ga0451843_0905320 3300041509 Bacteria 1208
93 Ga0439445_0006792 3300042004 Bacteria 2638
94 Ga0439432_047349 3300042006 Unclassified 1349
95 Ga0439434_0018230 3300042435 Bacteria 2099
96 Ga0466969_0015524 3300044656 Bacteria 3992
97 Ga0466972_0010557 3300044658 Bacteria 4635
98 Ga0466972_0023763 3300044658 Bacteria 3047
99 Ga0466972_0113754 3300044658 Bacteria 1278
100 Ga0466965_0033448 3300044683 Bacteria 2513
101 Ga0466965_0040479 3300044683 Bacteria 2294
102 Ga0466965_0121840 3300044683 Bacteria 1347
103 Ga0466966_0015951 3300044684 Bacteria 4966
104 Ga0466966_0021838 3300044684 Bacteria 4202
105 Ga0466961_0005637 3300044693 Bacteria 7912
106 Ga0466961_0036218 3300044693 Bacteria 3167
107 Ga0466961_0045152 3300044693 Bacteria 2819
108 Ga0466961_0098742 3300044693 Bacteria 1841
109 Ga0466961_0101696 3300044693 Bacteria 1810
110 Ga0466963_0003380 3300044694 Bacteria 9117
111 Ga0466963_0013904 3300044694 Bacteria 4955
112 Ga0466963_0064435 3300044694 Bacteria 2455
113 Ga0466963_0086451 3300044694 Bacteria 2131
114 Ga0466971_0003358 3300044719 Bacteria 6838
115 Ga0466971_0034292 3300044719 Bacteria 2275
116 Ga0466971_0042630 3300044719 Bacteria 2039
117 Ga0466970_0031255 3300044765 Bacteria 2812
118 Ga0466970_0042625 3300044765 Bacteria 2414
119 Ga0466970_0205257 3300044765 Bacteria 1097
120 Ga0466957_0016459 3300044842 Bacteria 4326
121 Ga0466957_0052424 3300044842 Bacteria 2484
122 Ga0466957_0054980 3300044842 Bacteria 2432
123 Ga0466957_0100176 3300044842 Bacteria 1825
124 Ga0466957_0109502 3300044842 Bacteria 1750
125 Ga0466960_0013882 3300044901 Bacteria 3432
126 Ga0466960_0052529 3300044901 Bacteria 1972
127 Ga0466959_0022453 3300045049 Bacteria 4665
128 Ga0466959_0064420 3300045049 Bacteria 2661
129 Ga0466958_0004649 3300045836 Bacteria 7283
130 Ga0466958_0007709 3300045836 Bacteria 5937
131 Ga0466958_0264443 3300045836 Bacteria 1101
132 Ga0466967_0049783 3300045976 Bacteria 3666
133 Ga0466967_0053527 3300045976 Bacteria 3548
134 Ga0466967_0065042 3300045976 Bacteria 3245
135 Ga0466967_0617841 3300045976 Bacteria 1070
136 Ga0466967_0629506 3300045976 Bacteria 1060
137 Ga0495608_0314753 3300046511 Bacteria 968
138 Ga0496104_0224999 3300048907 Bacteria 1788
139 Ga0496108_0029517 3300048911 Bacteria 4542
140 Ga0496114_0063982 3300048917 Bacteria 3080
141 Ga0496114_0181504 3300048917 Bacteria 1838
142 Ga0501031_0042409 3300049568 Bacteria 2970
143 Ga0501031_0125744 3300049568 Bacteria 1675
144 Ga0501032_0064847 3300049569 Bacteria 2444
145 Ga0501033_0005346 3300049570 Bacteria 10178
146 Ga0501033_0038663 3300049570 Bacteria 3565
147 Ga0501033_0236276 3300049570 Bacteria 1297
148 Ga0501034_0088853 3300049571 Bacteria 3088
149 Ga0501034_0161044 3300049571 Bacteria 2215
150 Ga0501036_0013049 3300049572 Bacteria 6901
151 Ga0501037_0007468 3300049573 Bacteria 7999
152 Ga0501037_0022464 3300049573 Bacteria 4666
153 Ga0501038_0083143 3300049574 Bacteria 2695
154 Ga0501038_0096536 3300049574 Bacteria 2467
155 Ga0501039_0027823 3300049575 Bacteria 4348
156 Ga0501039_0058236 3300049575 Bacteria 2992
157 Ga0501039_0273760 3300049575 Bacteria 1327
158 Ga0501043_0085123 3300049579 Bacteria 2484
159 Ga0501043_0177268 3300049579 Bacteria 1661
160 Ga0501046_0002805 3300049580 Bacteria 16228
161 Ga0501046_0004681 3300049580 Bacteria 12352
162 Ga0501047_0106256 3300049581 Bacteria 2687
163 Ga0501047_0327521 3300049581 Bacteria 1370
164 Ga0501048_0003821 3300049582 Bacteria 11486
165 Ga0501067_0034307 3300049583 Bacteria 2816
166 Ga0501067_0104346 3300049583 Bacteria 1575
167 Ga0501070_0032724 3300049586 Bacteria 4350
168 Ga0501070_0061527 3300049586 Bacteria 3110
169 Ga0501070_0260467 3300049586 Bacteria 1417
170 Ga0501071_0031819 3300049587 Bacteria 3743
171 Ga0501072_0043764 3300049588 Bacteria 3520
172 Ga0501072_0261692 3300049588 Bacteria 1377
173 Ga0501073_0095296 3300049589 Bacteria 2067
174 Ga0501074_0221240 3300049590 Bacteria 1348
175 Ga0501076_0278196 3300049592 Bacteria 1371
176 Ga0501079_0178906 3300049741 Bacteria 1655
177 Ga0501044_0262904 3300049823 Bacteria 1663
178 Ga0501045_0411518 3300049824 Bacteria 1006
179 nmdc:mga03683_18783_c1 3300050489 Bacteria 2632
180 nmdc:mga03n38_238437_c1 3300050490 Bacteria 956
181 nmdc:mga0yw44_172646_c1 3300050492 Bacteria 1420
182 nmdc:mga0yw44_250094_c1 3300050492 Bacteria 1180
183 nmdc:mga0yw44_34872_c1 3300050492 Bacteria 2952
184 nmdc:mga04h51_10534_c1 3300050495 Bacteria 2542
185 nmdc:mga07m45_146916_c1 3300050496 Bacteria 1366
186 Ga0501084_0379910 3300054114 Bacteria 1194
187 Ga0466962_0051003 3300061719 Bacteria 1978
188 Ga0530510_0184954 3300061734 Bacteria 1546
189 2857485338 2857481737 Bacteria 4761446
190 2643826668 2643221561 Bacteria 4984412
191 2643890532 2643221576 Bacteria 5214352
192 2643959588 2643221590 Bacteria 5214697
193 2644032955 2643221604 Bacteria 5014917
194 2644100548 2643221617 Bacteria 5139111
195 2644116956 2643221620 Bacteria 5134593
196 2644534025 2643221696 Bacteria 5431823
197 2738869435 2738541305 Bacteria 4910150
198 2774396038 2773857762 Bacteria 5971770
199 2809197701 2808606439 Bacteria 5952208
200 2812330963 2811994874 Bacteria 5367947
201 2812347829 2811994878 Bacteria 5992952
202 2891968778 2891968417 Bacteria 5821697
203 2984578677 2984576629 Bacteria 4248407
204 2990260697 2990256926 Bacteria 4252839
205 Ga0070658_10091351
206 Ga0070682_100062115
207 Ga0070682_100161503
208 Ga0068868_100079814
209 Ga0070660_100319228
210 Ga0070660_100342516
211 Ga0070689_100207293
212 Ga0070692_10000567
213 Ga0070675_100078680
214 Ga0070674_100045088
215 Ga0070688_100066982
216 Ga0070659_100076380
217 Ga0070714_100022250
218 Ga0070701_10001778
219 Ga0070700_100003232
220 Ga0070662_100031269
221 Ga0068867_100001469
222 Ga0070698_100001048
223 Ga0068853_100147757
224 Ga0070672_100001159
225 Ga0070664_100037765
226 Ga0068857_100298062
227 Ga0068854_100113541
228 Ga0070702_100025862
229 Ga0068861_100027928
230 Ga0068870_10004723
231 Ga0068860_100000504
232 Ga0081539_10127342
233 Ga0075365_10006337
234 Ga0075365_10059308
235 Ga0075365_10120177
236 Ga0075363_100012125
237 Ga0075363_100098772
238 Ga0075364_10017560
239 Ga0075364_10129437
240 Ga0075370_10024224
241 Ga0075370_10125788
242 Ga0075370_10148401
243 Ga0068865_100006349
244 Ga0111539_10269328
245 Ga0105245_10228900
246 Ga0105243_10010996
247 Ga0105248_10033729
248 Ga0105237_10245234
249 Ga0105249_10252695
250 Ga0105239_10007696
251 Ga0105239_10124786
252 Ga0157371_10083246
253 Ga0157372_10086764
254 Ga0163163_10091348
255 Ga0163163_10256520
256 Ga0157380_10125117
257 Ga0157380_10176936
258 Ga0157377_10016281
259 Ga0157376_10270235
260 Ga0206353_11131274
261 Ga0207643_10004420
262 Ga0207705_10162687
263 Ga0207705_10307936
264 Ga0207662_10048180
265 Ga0207657_10157266
266 Ga0207657_10257680
267 Ga0207659_10067642
268 Ga0207687_10190489
269 Ga0207664_10472249
270 Ga0207706_10070779
271 Ga0207669_10034490
272 Ga0207661_10135124
273 Ga0207679_10018361
274 Ga0207712_10175437
275 Ga0207678_10015739
276 Ga0207708_10000622
277 Ga0207708_10032593
278 Ga0207648_10000550
279 Ga0207675_100006152
280 Ga0207698_10096419
281 Ga0268264_10000547
282 Ga0316181_1215507
283 Ga0316182_1210953
284 Ga0307405_10358922
285 Ga0307410_10380402
286 Ga0307407_10095123
287 Ga0307412_10014410
288 Ga0307409_100161598
289 Ga0307409_100345875
290 Ga0307411_10357668
291 Ga0395901_0041234
292 Ga0395901_0089774
293 Ga0436363_1226748
294 Ga0439465_0015419
295 Ga0451839_0179642
296 Ga0451843_0905320
297 Ga0439445_0006792
298 Ga0439432_047349
299 Ga0439434_0018230
300 Ga0466969_0015524
301 Ga0466972_0010557
302 Ga0466972_0023763
303 Ga0466972_0113754
304 Ga0466965_0033448
305 Ga0466965_0040479
306 Ga0466965_0121840
307 Ga0466966_0015951
308 Ga0466966_0021838
309 Ga0466961_0005637
310 Ga0466961_0036218
311 Ga0466961_0045152
312 Ga0466961_0098742
313 Ga0466961_0101696
314 Ga0466963_0003380
315 Ga0466963_0013904
316 Ga0466963_0064435
317 Ga0466963_0086451
318 Ga0466971_0003358
319 Ga0466971_0034292
320 Ga0466971_0042630
321 Ga0466970_0031255
322 Ga0466970_0042625
323 Ga0466970_0205257
324 Ga0466957_0016459
325 Ga0466957_0052424
326 Ga0466957_0054980
327 Ga0466957_0100176
328 Ga0466957_0109502
329 Ga0466960_0013882
330 Ga0466960_0052529
331 Ga0466959_0022453
332 Ga0466959_0064420
333 Ga0466958_0004649
334 Ga0466958_0007709
335 Ga0466958_0264443
336 Ga0466967_0049783
337 Ga0466967_0053527
338 Ga0466967_0065042
339 Ga0466967_0617841
340 Ga0466967_0629506
341 Ga0495608_0314753
342 Ga0496104_0224999
343 Ga0496108_0029517
344 Ga0496114_0063982
345 Ga0496114_0181504
346 Ga0501031_0042409
347 Ga0501031_0125744
348 Ga0501032_0064847
349 Ga0501033_0005346
350 Ga0501033_0038663
351 Ga0501033_0236276
352 Ga0501034_0088853
353 Ga0501034_0161044
354 Ga0501036_0013049
355 Ga0501037_0007468
356 Ga0501037_0022464
357 Ga0501038_0083143
358 Ga0501038_0096536
359 Ga0501039_0027823
360 Ga0501039_0058236
361 Ga0501039_0273760
362 Ga0501043_0085123
363 Ga0501043_0177268
364 Ga0501046_0002805
365 Ga0501046_0004681
366 Ga0501047_0106256
367 Ga0501047_0327521
368 Ga0501048_0003821
369 Ga0501067_0034307
370 Ga0501067_0104346
371 Ga0501070_0032724
372 Ga0501070_0061527
373 Ga0501070_0260467
374 Ga0501071_0031819
375 Ga0501072_0043764
376 Ga0501072_0261692
377 Ga0501073_0095296
378 Ga0501074_0221240
379 Ga0501076_0278196
380 Ga0501079_0178906
381 Ga0501044_0262904
382 Ga0501045_0411518
383 nmdc:mga03683_18783_c1
384 nmdc:mga03n38_238437_c1
385 nmdc:mga0yw44_172646_c1
386 nmdc:mga0yw44_250094_c1
387 nmdc:mga0yw44_34872_c1
388 nmdc:mga04h51_10534_c1
389 nmdc:mga07m45_146916_c1
390 Ga0501084_0379910
391 Ga0466962_0051003
392 Ga0530510_0184954
393 2857485338
394 2643826668
395 2643890532
396 2643959588
397 2644032955
398 2644100548
399 2644116956
400 2644534025
401 2738869435
402 2774396038
403 2809197701
404 2812330963
405 2812347829
406 2891968778
407 2984578677
408 2990260697

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14337

Abi_alpha

Abortive infection alpha

130

313

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p4w-assembly1.cif.gz_A crystal structure of heat shock regulator from pyrococcus furiosus 0.6631 144 264
3h35-assembly1.cif.gz_C structure of the uncharacterized protein abo_0056 from the hydrocarbon-degrading marine bacterium alcanivorax borkumensis sk2. 0.6535 147 276
6fai-assembly1.cif.gz_l structure of a eukaryotic cytoplasmic pre-40s ribosomal subunit 0.6393 142 270
3h35-assembly1.cif.gz_C structure of the uncharacterized protein abo_0056 from the hydrocarbon-degrading marine bacterium alcanivorax borkumensis sk2. 0.6061 147 276
2fxa-assembly3.cif.gz_C structure of the protease production regulatory protein hpr from bacillus subtilis. 0.5889 127 280
ID Description Score Start End Superfamily
af_E9QIW2_406_483_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7184 157 269 1.10.10.10
1aipC02 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1; 0.6952 69 110 1.10.286.20
af_P40160_1_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6911 150 270 1.10.10.10
3h35B00 Alpha Beta;2-Layer Sandwich;Translation Initiation Factor IF3; 0.671 147 273 3.30.110.190
3bz6A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6637 154 283 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A5C7YLY0-F1-model_v4 deleted 0.9667 144 276
AF-A0A6G6WLV8-F1-model_v4 DUF4393 domain-containing protein 0.912 123 292
AF-A0A1N0XAP6-F1-model_v4 deleted 0.9072 174 283
AF-A0A6G6WLV8-F1-model_v4 DUF4393 domain-containing protein 0.9068 123 292
AF-A0A0Q6FPL2-F1-model_v4 DUF4393 domain-containing protein 0.9027 123 292

Map