F318459
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 208 | 162 | 416 | 317 |
Family's Representative Sequence
| Representative Sequence | 3300054114|Ga0501084_0185487|Ga0501084_0185487_74_1156 |
| Length | 360 |
| Sequence | MGVDMGELHGTHVPVLLERCLALLAPALRSAAEAGRTPVHVDATVGLGGHAAAVLAAHPTAVLVGLDRDTQALAHARRRLAPYGDRVQLAHAVYDELPEVLDRLGHRRVDGVLFDLGVSSLQLDSPDRGFAYAVDAPLDMRMDQGRGITAAEVVNGYAAEDLARVLRVYGEERFAARIAAAVVRERGRAPITSSARLAELVKGAIPAAARRTGGNPAKRTFQALRIEVNGELKALESAVPAALDALAPGGRLVVLSYHSLEDRIVKRAIAARARSTAPIDLPVEPPGTGPTLRLLTRGAELPDEAEVAANTRAASARLRAAEHIDQHGNGTDRERPRRVLALHLPHRPVTARRKAEGEGT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 8 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 11 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 12 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 13 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 14 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 15 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 16 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 17 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 29 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 30 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 31 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 32 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 33 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 34 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 48 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 49 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 50 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 51 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 52 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 53 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 54 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 55 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 56 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 57 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 58 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 59 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 60 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 61 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 62 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 63 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 64 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 65 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 66 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 67 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 68 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 69 | 3300042131 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 | Metagenome | Rhizosphere |
| 70 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 71 | 3300042138 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 | Metagenome | Rhizosphere |
| 72 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 73 | 3300042184 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 | Metagenome | Rhizosphere |
| 74 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 75 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 76 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 77 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 78 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 79 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 80 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 81 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 106 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 107 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 108 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 113 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 114 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 115 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 116 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 122 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 2554235005 | Streptomyces violaceusniger SPC6 | Isolate | Rhizosphere |
| 139 | 2616644814 | Streptomyces mirabilis OK461 | Isolate | Rhizosphere |
| 140 | 2643221548 | Streptomyces sp. Root55 | Isolate | Unclassified |
| 141 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 142 | 2643221587 | Streptomyces sp. Root66D1 | Isolate | Unclassified |
| 143 | 2643221670 | Streptomyces sp. Root431 | Isolate | Unclassified |
| 144 | 2643221673 | Streptomyces sp. Root1295 | Isolate | Unclassified |
| 145 | 2643221677 | Streptomyces sp. Root1304 | Isolate | Unclassified |
| 146 | 2643221682 | Streptomyces sp. Root1319 | Isolate | Unclassified |
| 147 | 2786546132 | Streptomyces sp. W SAI-097 | Isolate | Unclassified |
| 148 | 2808606982 | Streptomyces sp. SLBN-118 | Isolate | Unclassified |
| 149 | 2811994879 | Streptomyces sp. 4-17 | Isolate | Unclassified |
| 150 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 151 | 2862507626 | Streptomyces sp. NWU339 | Isolate | Unclassified |
| 152 | 2873151551 | Streptomyces silaceus ACCC40021 | Isolate | Rhizosphere |
| 153 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 154 | 2918501144 | Streptomyces sp. PvR006 | Isolate | Rhizosphere |
| 155 | 2919468124 | Streptomyces sp. 3330 | Isolate | Rhizosphere |
| 156 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 157 | 2946064051 | Streptomyces luteogriseus W4I19-1 | Isolate | Rhizosphere |
| 158 | 2954673503 | Streptomyces sp. SAI-119 | Isolate | Rhizosphere |
| 159 | 2954682443 | Streptomyces sp. SAI-149 | Isolate | Rhizosphere |
| 160 | 2966598605 | Kitasatospora papulosa SLBN-177 | Isolate | Rhizosphere |
| 161 | 3006393351 | Streptomyces sp. SID4985 | Isolate | Unclassified |
| 162 | 8054160619 | Streptomyces rhizoryzae RS10V-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.1 |
| Metatranscriptomes | 2.88 |
| Isolates | 12.02 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 8.17 |
| Rhizosphere | 80.77 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501084_0185487 | 3300054114 | Bacteria | 1756 |
| 2 | Ga0070658_10001449 | 3300005327 | Bacteria | 20243 |
| 3 | Ga0070658_10001851 | 3300005327 | Bacteria | 17821 |
| 4 | Ga0070658_10042094 | 3300005327 | Bacteria | 3687 |
| 5 | Ga0070680_100078226 | 3300005336 | Bacteria | 2724 |
| 6 | Ga0070708_100049681 | 3300005445 | Bacteria | 3711 |
| 7 | Ga0070681_10133570 | 3300005458 | Bacteria | 2413 |
| 8 | Ga0070706_100169905 | 3300005467 | Bacteria | 2036 |
| 9 | Ga0070679_100001230 | 3300005530 | Bacteria | 22502 |
| 10 | Ga0070679_100015162 | 3300005530 | Bacteria | 7406 |
| 11 | Ga0070679_100061270 | 3300005530 | Bacteria | 3750 |
| 12 | Ga0070684_100033085 | 3300005535 | Bacteria | 4412 |
| 13 | Ga0070664_100139141 | 3300005564 | Bacteria | 2137 |
| 14 | Ga0068852_100022825 | 3300005616 | Bacteria | 5025 |
| 15 | Ga0068859_100000204 | 3300005617 | Bacteria | 58400 |
| 16 | Ga0068864_100002588 | 3300005618 | Bacteria | 14936 |
| 17 | Ga0068863_100027824 | 3300005841 | Bacteria | 5396 |
| 18 | Ga0068862_100000240 | 3300005844 | Bacteria | 60867 |
| 19 | Ga0075428_100204378 | 3300006844 | Bacteria | 2135 |
| 20 | Ga0075429_100029458 | 3300006880 | Bacteria | 4768 |
| 21 | Ga0097620_100000204 | 3300006931 | Bacteria | 58400 |
| 22 | Ga0105247_10000041 | 3300009101 | Bacteria | 158571 |
| 23 | Ga0114129_10595541 | 3300009147 | Bacteria | 1433 |
| 24 | Ga0105248_10010520 | 3300009177 | Bacteria | 10191 |
| 25 | Ga0105237_10206012 | 3300009545 | Bacteria | 1967 |
| 26 | Ga0105238_10372044 | 3300009551 | Bacteria | 1419 |
| 27 | Ga0105249_10064751 | 3300009553 | Bacteria | 3361 |
| 28 | Ga0157369_10012525 | 3300013105 | Bacteria | 9621 |
| 29 | Ga0163163_10007656 | 3300014325 | Bacteria | 9543 |
| 30 | Ga0163163_10051822 | 3300014325 | Bacteria | 4046 |
| 31 | Ga0157379_10012591 | 3300014968 | Bacteria | 7388 |
| 32 | Ga0157379_10043478 | 3300014968 | Bacteria | 4011 |
| 33 | Ga0157376_10461058 | 3300014969 | Bacteria | 1242 |
| 34 | Ga0197907_11480162 | 3300020069 | Bacteria | 2548 |
| 35 | Ga0206356_11437141 | 3300020070 | Bacteria | 1560 |
| 36 | Ga0206354_11534743 | 3300020081 | Bacteria | 4768 |
| 37 | Ga0206353_10688407 | 3300020082 | Bacteria | 6713 |
| 38 | Ga0213875_10000035 | 3300021388 | Bacteria | 167011 |
| 39 | Ga0224712_10015995 | 3300022467 | Bacteria | 2454 |
| 40 | Ga0224712_10087386 | 3300022467 | Bacteria | 1299 |
| 41 | Ga0207710_10000038 | 3300025900 | Bacteria | 241794 |
| 42 | Ga0207705_10015363 | 3300025909 | Bacteria | 5492 |
| 43 | Ga0207707_10025438 | 3300025912 | Bacteria | 5179 |
| 44 | Ga0207660_10081042 | 3300025917 | Bacteria | 2384 |
| 45 | Ga0207657_10058360 | 3300025919 | Bacteria | 3321 |
| 46 | Ga0207657_10332122 | 3300025919 | Bacteria | 1200 |
| 47 | Ga0207652_10002392 | 3300025921 | Bacteria | 15841 |
| 48 | Ga0207652_10390145 | 3300025921 | Bacteria | 1256 |
| 49 | Ga0207700_10447115 | 3300025928 | Bacteria | 1138 |
| 50 | Ga0207664_10081543 | 3300025929 | Bacteria | 2633 |
| 51 | Ga0207661_10074964 | 3300025944 | Bacteria | 2775 |
| 52 | Ga0207702_10092919 | 3300026078 | Bacteria | 2645 |
| 53 | Ga0207676_10028800 | 3300026095 | Bacteria | 4153 |
| 54 | Ga0207698_10406029 | 3300026142 | Bacteria | 1303 |
| 55 | Ga0268266_10189160 | 3300028379 | Bacteria | 1879 |
| 56 | Ga0307515_10197958 | 3300028794 | Bacteria | 1895 |
| 57 | Ga0307515_10315034 | 3300028794 | Bacteria | 1236 |
| 58 | Ga0265320_10057643 | 3300031240 | Bacteria | 1863 |
| 59 | Ga0316576_10003435 | 3300031727 | Bacteria | 9275 |
| 60 | Ga0316576_10007896 | 3300031727 | Bacteria | 6733 |
| 61 | Ga0316577_10014727 | 3300031733 | Bacteria | 4296 |
| 62 | Ga0307413_10004217 | 3300031824 | Bacteria | 6214 |
| 63 | Ga0316583_10001847 | 3300032133 | Bacteria | 7206 |
| 64 | Ga0316580_10003326 | 3300032139 | Bacteria | 4549 |
| 65 | Ga0316584_0035952 | 3300036712 | Bacteria | 3674 |
| 66 | Ga0395899_0268473 | 3300037312 | Bacteria | 1164 |
| 67 | Ga0395900_0018059 | 3300037418 | Bacteria | 7200 |
| 68 | Ga0395900_0036672 | 3300037418 | Bacteria | 5055 |
| 69 | Ga0395905_0185394 | 3300037471 | Bacteria | 1953 |
| 70 | Ga0436364_0623424 | 3300037853 | Bacteria | 43926 |
| 71 | Ga0395901_0223251 | 3300038443 | Bacteria | 1969 |
| 72 | Ga0395901_0252790 | 3300038443 | Bacteria | 1836 |
| 73 | Ga0395901_0403561 | 3300038443 | Bacteria | 1404 |
| 74 | Ga0436365_1596206 | 3300039437 | Bacteria | 1172 |
| 75 | Ga0436365_1763246 | 3300039437 | Bacteria | 6018 |
| 76 | Ga0436363_1013702 | 3300039450 | Bacteria | 3826 |
| 77 | Ga0436363_1359094 | 3300039450 | Bacteria | 1199 |
| 78 | Ga0439436_0046435 | 3300041404 | Bacteria | 1234 |
| 79 | Ga0439439_0003291 | 3300041406 | Bacteria | 3554 |
| 80 | Ga0439433_0003075 | 3300041999 | Bacteria | 3572 |
| 81 | Ga0439442_010349 | 3300042002 | Bacteria | 1891 |
| 82 | Ga0439448_0015760 | 3300042005 | Bacteria | 2292 |
| 83 | Ga0439449_0001914 | 3300042007 | Bacteria | 8170 |
| 84 | Ga0439449_0010933 | 3300042007 | Bacteria | 3425 |
| 85 | Ga0439457_000114 | 3300042014 | Bacteria | 19283 |
| 86 | Ga0450894_000184 | 3300042131 | Bacteria | 11274 |
| 87 | Ga0450898_003774 | 3300042134 | Bacteria | 2196 |
| 88 | Ga0450903_000039 | 3300042138 | Bacteria | 25447 |
| 89 | Ga0439458_0002688 | 3300042157 | Bacteria | 4291 |
| 90 | Ga0450908_001833 | 3300042184 | Bacteria | 4154 |
| 91 | Ga0466963_0001948 | 3300044694 | Bacteria | 11320 |
| 92 | Ga0466963_0264760 | 3300044694 | Bacteria | 1207 |
| 93 | Ga0466964_0058226 | 3300044706 | Bacteria | 1601 |
| 94 | Ga0466970_0059206 | 3300044765 | Bacteria | 2051 |
| 95 | Ga0466960_0090955 | 3300044901 | Bacteria | 1555 |
| 96 | Ga0466959_0087397 | 3300045049 | Bacteria | 2242 |
| 97 | Ga0466958_0108698 | 3300045836 | Bacteria | 1730 |
| 98 | Ga0466958_0258515 | 3300045836 | Bacteria | 1114 |
| 99 | Ga0466967_0006841 | 3300045976 | Bacteria | 8132 |
| 100 | Ga0466967_0176102 | 3300045976 | Bacteria | 2015 |
| 101 | Ga0466967_0261340 | 3300045976 | Bacteria | 1656 |
| 102 | Ga0495627_044365 | 3300046453 | Bacteria | 1357 |
| 103 | Ga0495638_0099758 | 3300046460 | Bacteria | 1737 |
| 104 | Ga0495641_0026144 | 3300046461 | Bacteria | 2852 |
| 105 | Ga0495653_0087559 | 3300046463 | Bacteria | 2287 |
| 106 | Ga0495608_0064401 | 3300046511 | Bacteria | 2403 |
| 107 | Ga0495620_0013891 | 3300046515 | Bacteria | 4109 |
| 108 | Ga0495643_0015140 | 3300046522 | Bacteria | 4568 |
| 109 | Ga0495640_0022376 | 3300046533 | Bacteria | 4620 |
| 110 | Ga0495587_0118351 | 3300046536 | Bacteria | 1518 |
| 111 | Ga0495645_0103573 | 3300046543 | Bacteria | 2022 |
| 112 | Ga0495661_0033449 | 3300046665 | Bacteria | 3243 |
| 113 | Ga0495657_0070268 | 3300046675 | Bacteria | 2288 |
| 114 | Ga0495613_0080600 | 3300046689 | Bacteria | 2365 |
| 115 | Ga0495613_0084095 | 3300046689 | Bacteria | 2310 |
| 116 | Ga0495613_0115498 | 3300046689 | Bacteria | 1931 |
| 117 | Ga0495589_0021104 | 3300046794 | Bacteria | 3328 |
| 118 | Ga0495600_0100359 | 3300046809 | Bacteria | 1886 |
| 119 | Ga0495604_0033493 | 3300047317 | Bacteria | 4067 |
| 120 | Ga0495674_0384316 | 3300047319 | Bacteria | 1135 |
| 121 | Ga0495676_0090878 | 3300047321 | Bacteria | 2283 |
| 122 | Ga0495687_053468 | 3300047443 | Bacteria | 1700 |
| 123 | Ga0495684_0210558 | 3300047471 | Bacteria | 1430 |
| 124 | Ga0495593_0073061 | 3300047673 | Bacteria | 1779 |
| 125 | Ga0495614_0028836 | 3300048089 | Bacteria | 2389 |
| 126 | Ga0495626_0056663 | 3300048091 | Bacteria | 1793 |
| 127 | Ga0496101_0018399 | 3300048904 | Bacteria | 4751 |
| 128 | Ga0496104_0011629 | 3300048907 | Bacteria | 7889 |
| 129 | Ga0496104_0127855 | 3300048907 | Bacteria | 2440 |
| 130 | Ga0496104_0159535 | 3300048907 | Bacteria | 2164 |
| 131 | Ga0496105_0009324 | 3300048908 | Bacteria | 7672 |
| 132 | Ga0496105_0085777 | 3300048908 | Bacteria | 2602 |
| 133 | Ga0496107_0163122 | 3300048910 | Bacteria | 1652 |
| 134 | Ga0496108_0015022 | 3300048911 | Bacteria | 6322 |
| 135 | Ga0496109_0010411 | 3300048912 | Bacteria | 7942 |
| 136 | Ga0496109_0082736 | 3300048912 | Bacteria | 2959 |
| 137 | Ga0496109_0528624 | 3300048912 | Bacteria | 1113 |
| 138 | Ga0496110_0487556 | 3300048913 | Bacteria | 1123 |
| 139 | Ga0496112_0036733 | 3300048915 | Bacteria | 4779 |
| 140 | Ga0496114_0018446 | 3300048917 | Bacteria | 5641 |
| 141 | Ga0496114_0416111 | 3300048917 | Bacteria | 1190 |
| 142 | Ga0496115_0001237 | 3300048918 | Bacteria | 18328 |
| 143 | Ga0496115_0110041 | 3300048918 | Bacteria | 2263 |
| 144 | Ga0496119_0000698 | 3300048922 | Bacteria | 45004 |
| 145 | Ga0496120_0000340 | 3300048923 | Bacteria | 77467 |
| 146 | Ga0501032_0031242 | 3300049569 | Bacteria | 3651 |
| 147 | Ga0501033_0001301 | 3300049570 | Bacteria | 22178 |
| 148 | Ga0501033_0004679 | 3300049570 | Bacteria | 10947 |
| 149 | Ga0501034_0004808 | 3300049571 | Bacteria | 14936 |
| 150 | Ga0501034_0050174 | 3300049571 | Bacteria | 4209 |
| 151 | Ga0501034_0132020 | 3300049571 | Bacteria | 2480 |
| 152 | Ga0501036_0001116 | 3300049572 | Bacteria | 20390 |
| 153 | Ga0501036_0060280 | 3300049572 | Bacteria | 3214 |
| 154 | Ga0501038_0225038 | 3300049574 | Bacteria | 1495 |
| 155 | Ga0501039_0017045 | 3300049575 | Bacteria | 5569 |
| 156 | Ga0501042_0087352 | 3300049578 | Bacteria | 2237 |
| 157 | Ga0501043_0001960 | 3300049579 | Bacteria | 17588 |
| 158 | Ga0501043_0016938 | 3300049579 | Bacteria | 5712 |
| 159 | Ga0501047_0000242 | 3300049581 | Bacteria | 64647 |
| 160 | Ga0501047_0027065 | 3300049581 | Bacteria | 5523 |
| 161 | Ga0501047_0090305 | 3300049581 | Bacteria | 2940 |
| 162 | Ga0501047_0167087 | 3300049581 | Bacteria | 2070 |
| 163 | Ga0501068_0076358 | 3300049584 | Bacteria | 2050 |
| 164 | Ga0501069_0034330 | 3300049585 | Bacteria | 2794 |
| 165 | Ga0501069_0141120 | 3300049585 | Bacteria | 1382 |
| 166 | Ga0501070_0000441 | 3300049586 | Bacteria | 37765 |
| 167 | Ga0501070_0019825 | 3300049586 | Bacteria | 5639 |
| 168 | Ga0501070_0118949 | 3300049586 | Bacteria | 2183 |
| 169 | Ga0501071_0218835 | 3300049587 | Bacteria | 1433 |
| 170 | Ga0501072_0024468 | 3300049588 | Bacteria | 4697 |
| 171 | Ga0501074_0021328 | 3300049590 | Bacteria | 4704 |
| 172 | Ga0501074_0100754 | 3300049590 | Bacteria | 2067 |
| 173 | Ga0501079_0099811 | 3300049741 | Bacteria | 2250 |
| 174 | Ga0501083_0002047 | 3300049744 | Bacteria | 13867 |
| 175 | Ga0501035_0035099 | 3300049822 | Bacteria | 4553 |
| 176 | Ga0501035_0065891 | 3300049822 | Bacteria | 3215 |
| 177 | Ga0501044_0059765 | 3300049823 | Bacteria | 3904 |
| 178 | Ga0501044_0094627 | 3300049823 | Bacteria | 3012 |
| 179 | Ga0501044_0122742 | 3300049823 | Bacteria | 2597 |
| 180 | Ga0495612_0097020 | 3300053078 | Bacteria | 1253 |
| 181 | Ga0495655_0009076 | 3300053083 | Bacteria | 1914 |
| 182 | Ga0495655_0042077 | 3300053083 | Bacteria | 1171 |
| 183 | Ga0501082_0273998 | 3300060353 | Bacteria | 1469 |
| 184 | 2554259000 | 2554235005 | Bacteria | 6457341 |
| 185 | 2616694261 | 2616644814 | Bacteria | 11555299 |
| 186 | 2643759286 | 2643221548 | Bacteria | 8053412 |
| 187 | 2643897354 | 2643221578 | Bacteria | 9213798 |
| 188 | 2643945179 | 2643221587 | Bacteria | 7586415 |
| 189 | 2644387410 | 2643221670 | Bacteria | 6497041 |
| 190 | 2644408499 | 2643221673 | Bacteria | 9196637 |
| 191 | 2644432078 | 2643221677 | Bacteria | 7584031 |
| 192 | 2644463296 | 2643221682 | Bacteria | 6743283 |
| 193 | 2786668959 | 2786546132 | Bacteria | 10419719 |
| 194 | 2811847579 | 2808606982 | Bacteria | 7791042 |
| 195 | 2812359613 | 2811994879 | Bacteria | 9313447 |
| 196 | 2855387792 | 2855386786 | Bacteria | 4752232 |
| 197 | 2862512515 | 2862507626 | Bacteria | 9425308 |
| 198 | 2873157046 | 2873151551 | Bacteria | 8625867 |
| 199 | 2875393296 | 2875391855 | Bacteria | 7600475 |
| 200 | 2918503168 | 2918501144 | Bacteria | 8668083 |
| 201 | 2919472984 | 2919468124 | Bacteria | 9133025 |
| 202 | 2946051395 | 2946045630 | Bacteria | 8527308 |
| 203 | 2946066296 | 2946064051 | Bacteria | 8957905 |
| 204 | 2954675240 | 2954673503 | Bacteria | 9685905 |
| 205 | 2954688895 | 2954682443 | Bacteria | 9862841 |
| 206 | 2966603765 | 2966598605 | Bacteria | 7676064 |
| 207 | 3006393539 | 3006393351 | Bacteria | 6615579 |
| 208 | 8054163643 | 8054160619 | Bacteria | 7783213 |
| 209 | Ga0501084_0185487 | |||
| 210 | Ga0070658_10001449 | |||
| 211 | Ga0070658_10001851 | |||
| 212 | Ga0070658_10042094 | |||
| 213 | Ga0070680_100078226 | |||
| 214 | Ga0070708_100049681 | |||
| 215 | Ga0070681_10133570 | |||
| 216 | Ga0070706_100169905 | |||
| 217 | Ga0070679_100001230 | |||
| 218 | Ga0070679_100015162 | |||
| 219 | Ga0070679_100061270 | |||
| 220 | Ga0070684_100033085 | |||
| 221 | Ga0070664_100139141 | |||
| 222 | Ga0068852_100022825 | |||
| 223 | Ga0068859_100000204 | |||
| 224 | Ga0068864_100002588 | |||
| 225 | Ga0068863_100027824 | |||
| 226 | Ga0068862_100000240 | |||
| 227 | Ga0075428_100204378 | |||
| 228 | Ga0075429_100029458 | |||
| 229 | Ga0097620_100000204 | |||
| 230 | Ga0105247_10000041 | |||
| 231 | Ga0114129_10595541 | |||
| 232 | Ga0105248_10010520 | |||
| 233 | Ga0105237_10206012 | |||
| 234 | Ga0105238_10372044 | |||
| 235 | Ga0105249_10064751 | |||
| 236 | Ga0157369_10012525 | |||
| 237 | Ga0163163_10007656 | |||
| 238 | Ga0163163_10051822 | |||
| 239 | Ga0157379_10012591 | |||
| 240 | Ga0157379_10043478 | |||
| 241 | Ga0157376_10461058 | |||
| 242 | Ga0197907_11480162 | |||
| 243 | Ga0206356_11437141 | |||
| 244 | Ga0206354_11534743 | |||
| 245 | Ga0206353_10688407 | |||
| 246 | Ga0213875_10000035 | |||
| 247 | Ga0224712_10015995 | |||
| 248 | Ga0224712_10087386 | |||
| 249 | Ga0207710_10000038 | |||
| 250 | Ga0207705_10015363 | |||
| 251 | Ga0207707_10025438 | |||
| 252 | Ga0207660_10081042 | |||
| 253 | Ga0207657_10058360 | |||
| 254 | Ga0207657_10332122 | |||
| 255 | Ga0207652_10002392 | |||
| 256 | Ga0207652_10390145 | |||
| 257 | Ga0207700_10447115 | |||
| 258 | Ga0207664_10081543 | |||
| 259 | Ga0207661_10074964 | |||
| 260 | Ga0207702_10092919 | |||
| 261 | Ga0207676_10028800 | |||
| 262 | Ga0207698_10406029 | |||
| 263 | Ga0268266_10189160 | |||
| 264 | Ga0307515_10197958 | |||
| 265 | Ga0307515_10315034 | |||
| 266 | Ga0265320_10057643 | |||
| 267 | Ga0316576_10003435 | |||
| 268 | Ga0316576_10007896 | |||
| 269 | Ga0316577_10014727 | |||
| 270 | Ga0307413_10004217 | |||
| 271 | Ga0316583_10001847 | |||
| 272 | Ga0316580_10003326 | |||
| 273 | Ga0316584_0035952 | |||
| 274 | Ga0395899_0268473 | |||
| 275 | Ga0395900_0018059 | |||
| 276 | Ga0395900_0036672 | |||
| 277 | Ga0395905_0185394 | |||
| 278 | Ga0436364_0623424 | |||
| 279 | Ga0395901_0223251 | |||
| 280 | Ga0395901_0252790 | |||
| 281 | Ga0395901_0403561 | |||
| 282 | Ga0436365_1596206 | |||
| 283 | Ga0436365_1763246 | |||
| 284 | Ga0436363_1013702 | |||
| 285 | Ga0436363_1359094 | |||
| 286 | Ga0439436_0046435 | |||
| 287 | Ga0439439_0003291 | |||
| 288 | Ga0439433_0003075 | |||
| 289 | Ga0439442_010349 | |||
| 290 | Ga0439448_0015760 | |||
| 291 | Ga0439449_0001914 | |||
| 292 | Ga0439449_0010933 | |||
| 293 | Ga0439457_000114 | |||
| 294 | Ga0450894_000184 | |||
| 295 | Ga0450898_003774 | |||
| 296 | Ga0450903_000039 | |||
| 297 | Ga0439458_0002688 | |||
| 298 | Ga0450908_001833 | |||
| 299 | Ga0466963_0001948 | |||
| 300 | Ga0466963_0264760 | |||
| 301 | Ga0466964_0058226 | |||
| 302 | Ga0466970_0059206 | |||
| 303 | Ga0466960_0090955 | |||
| 304 | Ga0466959_0087397 | |||
| 305 | Ga0466958_0108698 | |||
| 306 | Ga0466958_0258515 | |||
| 307 | Ga0466967_0006841 | |||
| 308 | Ga0466967_0176102 | |||
| 309 | Ga0466967_0261340 | |||
| 310 | Ga0495627_044365 | |||
| 311 | Ga0495638_0099758 | |||
| 312 | Ga0495641_0026144 | |||
| 313 | Ga0495653_0087559 | |||
| 314 | Ga0495608_0064401 | |||
| 315 | Ga0495620_0013891 | |||
| 316 | Ga0495643_0015140 | |||
| 317 | Ga0495640_0022376 | |||
| 318 | Ga0495587_0118351 | |||
| 319 | Ga0495645_0103573 | |||
| 320 | Ga0495661_0033449 | |||
| 321 | Ga0495657_0070268 | |||
| 322 | Ga0495613_0080600 | |||
| 323 | Ga0495613_0084095 | |||
| 324 | Ga0495613_0115498 | |||
| 325 | Ga0495589_0021104 | |||
| 326 | Ga0495600_0100359 | |||
| 327 | Ga0495604_0033493 | |||
| 328 | Ga0495674_0384316 | |||
| 329 | Ga0495676_0090878 | |||
| 330 | Ga0495687_053468 | |||
| 331 | Ga0495684_0210558 | |||
| 332 | Ga0495593_0073061 | |||
| 333 | Ga0495614_0028836 | |||
| 334 | Ga0495626_0056663 | |||
| 335 | Ga0496101_0018399 | |||
| 336 | Ga0496104_0011629 | |||
| 337 | Ga0496104_0127855 | |||
| 338 | Ga0496104_0159535 | |||
| 339 | Ga0496105_0009324 | |||
| 340 | Ga0496105_0085777 | |||
| 341 | Ga0496107_0163122 | |||
| 342 | Ga0496108_0015022 | |||
| 343 | Ga0496109_0010411 | |||
| 344 | Ga0496109_0082736 | |||
| 345 | Ga0496109_0528624 | |||
| 346 | Ga0496110_0487556 | |||
| 347 | Ga0496112_0036733 | |||
| 348 | Ga0496114_0018446 | |||
| 349 | Ga0496114_0416111 | |||
| 350 | Ga0496115_0001237 | |||
| 351 | Ga0496115_0110041 | |||
| 352 | Ga0496119_0000698 | |||
| 353 | Ga0496120_0000340 | |||
| 354 | Ga0501032_0031242 | |||
| 355 | Ga0501033_0001301 | |||
| 356 | Ga0501033_0004679 | |||
| 357 | Ga0501034_0004808 | |||
| 358 | Ga0501034_0050174 | |||
| 359 | Ga0501034_0132020 | |||
| 360 | Ga0501036_0001116 | |||
| 361 | Ga0501036_0060280 | |||
| 362 | Ga0501038_0225038 | |||
| 363 | Ga0501039_0017045 | |||
| 364 | Ga0501042_0087352 | |||
| 365 | Ga0501043_0001960 | |||
| 366 | Ga0501043_0016938 | |||
| 367 | Ga0501047_0000242 | |||
| 368 | Ga0501047_0027065 | |||
| 369 | Ga0501047_0090305 | |||
| 370 | Ga0501047_0167087 | |||
| 371 | Ga0501068_0076358 | |||
| 372 | Ga0501069_0034330 | |||
| 373 | Ga0501069_0141120 | |||
| 374 | Ga0501070_0000441 | |||
| 375 | Ga0501070_0019825 | |||
| 376 | Ga0501070_0118949 | |||
| 377 | Ga0501071_0218835 | |||
| 378 | Ga0501072_0024468 | |||
| 379 | Ga0501074_0021328 | |||
| 380 | Ga0501074_0100754 | |||
| 381 | Ga0501079_0099811 | |||
| 382 | Ga0501083_0002047 | |||
| 383 | Ga0501035_0035099 | |||
| 384 | Ga0501035_0065891 | |||
| 385 | Ga0501044_0059765 | |||
| 386 | Ga0501044_0094627 | |||
| 387 | Ga0501044_0122742 | |||
| 388 | Ga0495612_0097020 | |||
| 389 | Ga0495655_0009076 | |||
| 390 | Ga0495655_0042077 | |||
| 391 | Ga0501082_0273998 | |||
| 392 | 2554259000 | |||
| 393 | 2616694261 | |||
| 394 | 2643759286 | |||
| 395 | 2643897354 | |||
| 396 | 2643945179 | |||
| 397 | 2644387410 | |||
| 398 | 2644408499 | |||
| 399 | 2644432078 | |||
| 400 | 2644463296 | |||
| 401 | 2786668959 | |||
| 402 | 2811847579 | |||
| 403 | 2812359613 | |||
| 404 | 2855387792 | |||
| 405 | 2862512515 | |||
| 406 | 2873157046 | |||
| 407 | 2875393296 | |||
| 408 | 2918503168 | |||
| 409 | 2919472984 | |||
| 410 | 2946051395 | |||
| 411 | 2946066296 | |||
| 412 | 2954675240 | |||
| 413 | 2954688895 | |||
| 414 | 2966603765 | |||
| 415 | 3006393539 | |||
| 416 | 8054163643 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3tka-assembly1.cif.gz_A-2 | crystal structure and solution saxs of methyltransferase rsmh from e.coli | 0.9436 | 14 | 318 |
| 1wg8-assembly2.cif.gz_B | crystal structure of a predicted s-adenosylmethionine-dependent methyltransferase tt1512 from thermus thermophilus hb8. | 0.9405 | 12 | 318 |
| 3tka-assembly1.cif.gz_A-2 | crystal structure and solution saxs of methyltransferase rsmh from e.coli | 0.9372 | 14 | 318 |
| 1wg8-assembly2.cif.gz_B | crystal structure of a predicted s-adenosylmethionine-dependent methyltransferase tt1512 from thermus thermophilus hb8. | 0.934 | 12 | 318 |
| 1n2x-assembly2.cif.gz_B | crystal structure analysis of tm0872, a putative sam-dependent methyltransferase, complexed with sam | 0.93 | 12 | 314 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3tkaA02 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Putative methyltransferase TM0872, insert domain | 0.9761 | 119 | 221 | 1.10.150.170 |
| 3tkaA02 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Putative methyltransferase TM0872, insert domain | 0.9472 | 119 | 221 | 1.10.150.170 |
| af_F7F172_184_294_1.10.150.170 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Putative methyltransferase TM0872, insert domain | 0.946 | 123 | 221 | 1.10.150.170 |
| 1wg8B02 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Putative methyltransferase TM0872, insert domain | 0.9413 | 118 | 222 | 1.10.150.170 |
| af_P60393_12_309_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9393 | 21 | 315 | 3.40.50.1000 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1Q6XIU7-F1-model_v4 | Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH) | 0.9853 | 24 | 317 |
GO:0005737
GO:0070475 GO:0071424 |
| AF-A0A1Q6XIU7-F1-model_v4 | Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH) | 0.9787 | 24 | 317 |
GO:0005737
GO:0070475 GO:0071424 |
| AF-A0A7W0PZV2-F1-model_v4 | 16S rRNA (Cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) | 0.9763 | 6 | 167 |
GO:0003723
GO:0005737 GO:0070475 GO:0071424 |
| AF-A0A2X3E5Y1-F1-model_v4 | rRNA small subunit methyltransferase H (EC 2.1.1.199) | 0.9718 | 126 | 221 |
GO:0005737
GO:0070475 GO:0071424 |
| AF-A0A1F6WQ28-F1-model_v4 | 16S rRNA (Cytosine(1402)-N(4))-methyltransferase | 0.9634 | 133 | 318 |
GO:0070475
GO:0071424 |