F317663

General Info

Members Datasets Scaffolds Average Seq Length
208 131 416 798

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10030189|Ga0075433_100301893
Length 891
Sequence MSDSTQPPRFRFWLWVIQIIGVIVPRRLRRDWRQEWEAELCYREALLADWDNLIWKTKFDLLRRSLGAFSDALWLQSYRWEDEMIQDLRFGLRMLVKKPGFTFVAVLTMSLGIGAITAIFTVIDAALLRSLPYKDPGRLVQLWETRNAGEIKQLDASYPDYLDWGQQHEAFEGICGFTGWGGSFTLTDRAEPERIEGARVTATFFSVLGVDPVLGRAFLADEDKPGAAPTVILSHALWSRVFGADPAIVGQQIRLDGKGYTVLGVLPRSFQFAPMGTAELWTPLRPSEGQLSRRFMHWLDVIARLKPGVSMEQAQAQLTTIAASIERDNPDSHTGAGLRIVPLHDEIVGPVRSVLLVLMGAVGFVLLIACANVANLQLVRNSTRRKEIGIRLALGATQWRLMRQMISESVLLTLMGGGVGLLVALWGIKLLIAPIPAAQLASMPYLKGLALDARVFCFAGGLSLLTGIVFGLAAAWRLSSSDVQASLKDGGNSYSSLRRHGFRNMLAVSEIALALVLLVGAGLMIKSTARLLEVKLGFRPERLLTMQMALPSGRYAEDDQVRAFHQQLISRIEGLPGVDGAATVNWLPMQPGPGDLLLIEGEPPPTPGTEPKASTRVVSAGYFHTMGISLLKGREFTDRDNQTSSGVIAINNALARRLFALQDPIGRRITFAGDEPRPYEIVGVVDDERVGALDEESASIVYRPFAQEPWPKLALIVRTTGDPQGVVNAVRSELQELDHDVAPYAVATMEQTINDTPSTFLRRYPALLMTVFASLALILAAVGIYGVISYTVTQRTREIGIRMALGAKTSDVLTLILQQGMRVALTGVGAGLAASFALTRLLKTLLFDVSATDPLTYAGVAGLLLIVALMACYLPARRAARVQPLTAIRHD

Samples

Sample ID Description Type Environment
1 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
112 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
113 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
118 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
119 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
120 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
121 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
122 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
123 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.48
Rhizosphere 99.52
Stem 0
Stem Tuber 0
Unclassified 8.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075433_10030189 3300006852 Unclassified 4623
2 CNAas_1000912 3300000532 Unclassified 2755
3 JGI24751J29686_10000016 3300002459 Bacteria 112162
4 JGI25406J46586_10021742 3300003203 Bacteria 2568
5 Ga0065704_10072958 3300005289 Bacteria 7745
6 Ga0065715_10002411 3300005293 Bacteria 6658
7 Ga0065707_10001601 3300005295 Bacteria 14979
8 Ga0070670_100000124 3300005331 Bacteria 71919
9 Ga0070670_100001612 3300005331 Bacteria 18240
10 Ga0070670_100018754 3300005331 Bacteria 5932
11 Ga0070670_100071075 3300005331 Bacteria 2988
12 Ga0070680_100003830 3300005336 Bacteria 11249
13 Ga0070682_100000222 3300005337 Bacteria 41129
14 Ga0070691_10016186 3300005341 Bacteria 3426
15 Ga0070692_10004776 3300005345 Bacteria 5693
16 Ga0070669_100004055 3300005353 Bacteria 10594
17 Ga0070671_100020911 3300005355 Bacteria 5339
18 Ga0070671_100031488 3300005355 Unclassified 4382
19 Ga0070674_100000069 3300005356 Bacteria 47131
20 Ga0070703_10005550 3300005406 Bacteria 3529
21 Ga0070705_100004811 3300005440 Bacteria 6566
22 Ga0070700_100000005 3300005441 Bacteria 233160
23 Ga0070700_100020807 3300005441 Bacteria 3808
24 Ga0070694_100003084 3300005444 Bacteria 9929
25 Ga0070694_100025959 3300005444 Bacteria 3794
26 Ga0070694_100033676 3300005444 Bacteria 3374
27 Ga0070678_100035107 3300005456 Bacteria 3498
28 Ga0070662_100000926 3300005457 Bacteria 17947
29 Ga0070681_10000587 3300005458 Bacteria 30116
30 Ga0070681_10012793 3300005458 Bacteria 8329
31 Ga0068867_100002135 3300005459 Bacteria 13893
32 Ga0070706_100000085 3300005467 Bacteria 108868
33 Ga0070706_100006055 3300005467 Bacteria 11434
34 Ga0070707_100000064 3300005468 Bacteria 96008
35 Ga0070707_100000250 3300005468 Bacteria 53730
36 Ga0070699_100001190 3300005518 Bacteria 24029
37 Ga0070699_100029715 3300005518 Bacteria 4713
38 Ga0070679_100000486 3300005530 Bacteria 34019
39 Ga0068853_100060683 3300005539 Bacteria 3268
40 Ga0070686_100005278 3300005544 Bacteria 7142
41 Ga0070695_100041329 3300005545 Unclassified 2922
42 Ga0070696_100001080 3300005546 Bacteria 17601
43 Ga0070693_100002995 3300005547 Bacteria 7821
44 Ga0070693_100035599 3300005547 Bacteria 2762
45 Ga0068855_100064990 3300005563 Bacteria 4254
46 Ga0068857_100003396 3300005577 Bacteria 13259
47 Ga0068857_100015169 3300005577 Bacteria 6722
48 Ga0068854_100009968 3300005578 Bacteria 6151
49 Ga0070702_100002537 3300005615 Bacteria 7928
50 Ga0068859_100002350 3300005617 Bacteria 19236
51 Ga0068859_100020379 3300005617 Bacteria 6657
52 Ga0068859_100038648 3300005617 Unclassified 4787
53 Ga0068859_100042479 3300005617 Bacteria 4566
54 Ga0068864_100000669 3300005618 Bacteria 28600
55 Ga0068864_100043602 3300005618 Unclassified 3841
56 Ga0068866_10001133 3300005718 Bacteria 11702
57 Ga0068861_100013433 3300005719 Bacteria 5733
58 Ga0068861_100026428 3300005719 Bacteria 4220
59 Ga0068870_10022517 3300005840 Bacteria 3096
60 Ga0068858_100016805 3300005842 Bacteria 6872
61 Ga0068858_100039474 3300005842 Bacteria 4377
62 Ga0068858_100066558 3300005842 Bacteria 3336
63 Ga0068858_100067059 3300005842 Unclassified 3323
64 Ga0068860_100053451 3300005843 Bacteria 3840
65 Ga0068860_100083314 3300005843 Bacteria 3041
66 Ga0081455_10004755 3300005937 Bacteria 15092
67 Ga0081455_10008387 3300005937 Bacteria 10747
68 Ga0081455_10008866 3300005937 Bacteria 10403
69 Ga0081539_10001352 3300005985 Bacteria 42697
70 Ga0081539_10003635 3300005985 Bacteria 18582
71 Ga0081539_10004032 3300005985 Bacteria 16861
72 Ga0081539_10004630 3300005985 Bacteria 14978
73 Ga0081539_10029379 3300005985 Bacteria 3435
74 Ga0068871_100039910 3300006358 Unclassified 3758
75 Ga0075428_100007338 3300006844 Bacteria 12218
76 Ga0075431_100057759 3300006847 Bacteria 4002
77 Ga0075431_100112608 3300006847 Bacteria 2808
78 Ga0075433_10002423 3300006852 Bacteria 14185
79 Ga0075433_10003711 3300006852 Bacteria 11818
80 Ga0075433_10074127 3300006852 Bacteria 2994
81 Ga0075434_100002072 3300006871 Bacteria 17432
82 Ga0068865_100015163 3300006881 Unclassified 4911
83 Ga0068865_100027934 3300006881 Unclassified 3732
84 Ga0075436_100001353 3300006914 Bacteria 16668
85 Ga0097620_100002350 3300006931 Bacteria 19236
86 Ga0097620_100020379 3300006931 Bacteria 6657
87 Ga0097620_100038648 3300006931 Unclassified 4787
88 Ga0097620_100042478 3300006931 Bacteria 4566
89 Ga0105240_10026617 3300009093 Bacteria 7590
90 Ga0111539_10001352 3300009094 Bacteria 32635
91 Ga0111539_10001418 3300009094 Bacteria 31952
92 Ga0105247_10004877 3300009101 Bacteria 8540
93 Ga0114129_10040628 3300009147 Bacteria 6556
94 Ga0114129_10041122 3300009147 Bacteria 6516
95 Ga0105243_10028262 3300009148 Bacteria 4304
96 Ga0105243_10042800 3300009148 Unclassified 3547
97 Ga0105242_10023829 3300009176 Unclassified 4828
98 Ga0105242_10049014 3300009176 Bacteria 3435
99 Ga0105248_10008597 3300009177 Bacteria 11213
100 Ga0105248_10036625 3300009177 Bacteria 5487
101 Ga0105248_10073890 3300009177 Unclassified 3832
102 Ga0105248_10080880 3300009177 Unclassified 3653
103 Ga0105248_10136576 3300009177 Bacteria 2766
104 Ga0105237_10002381 3300009545 Bacteria 23332
105 Ga0105249_10000028 3300009553 Bacteria 230039
106 Ga0105239_10023708 3300010375 Bacteria 6757
107 Ga0105239_10148811 3300010375 Bacteria 2613
108 Ga0105246_10042275 3300011119 Bacteria 3086
109 Ga0157374_10009562 3300013296 Bacteria 8325
110 Ga0157378_10000788 3300013297 Bacteria 29413
111 Ga0157378_10004767 3300013297 Bacteria 11885
112 Ga0157378_10032022 3300013297 Unclassified 4644
113 Ga0157378_10113588 3300013297 Bacteria 2487
114 Ga0163162_10000027 3300013306 Bacteria 178451
115 Ga0163162_10013287 3300013306 Bacteria 8043
116 Ga0163162_10014915 3300013306 Bacteria 7589
117 Ga0163162_10038868 3300013306 Bacteria 4751
118 Ga0163162_10063742 3300013306 Bacteria 3729
119 Ga0157375_10024981 3300013308 Bacteria 5541
120 Ga0163163_10000241 3300014325 Bacteria 55923
121 Ga0163163_10000700 3300014325 Bacteria 28457
122 Ga0163163_10013010 3300014325 Bacteria 7601
123 Ga0163163_10068599 3300014325 Bacteria 3528
124 Ga0157380_10004178 3300014326 Bacteria 9978
125 Ga0157380_10012300 3300014326 Bacteria 6205
126 Ga0157379_10028150 3300014968 Bacteria 5003
127 Ga0157376_10033282 3300014969 Bacteria 4148
128 Ga0207653_10001104 3300025885 Bacteria 8837
129 Ga0207642_10000098 3300025899 Bacteria 23194
130 Ga0207710_10001693 3300025900 Bacteria 10690
131 Ga0207647_10046859 3300025904 Bacteria 2691
132 Ga0207684_10000091 3300025910 Bacteria 170468
133 Ga0207684_10040073 3300025910 Bacteria 3971
134 Ga0207707_10000003 3300025912 Bacteria 642592
135 Ga0207671_10001241 3300025914 Bacteria 30127
136 Ga0207671_10031070 3300025914 Bacteria 3982
137 Ga0207660_10001711 3300025917 Bacteria 14713
138 Ga0207652_10000729 3300025921 Bacteria 31855
139 Ga0207646_10000207 3300025922 Bacteria 80239
140 Ga0207646_10001788 3300025922 Bacteria 26037
141 Ga0207681_10001092 3300025923 Bacteria 17617
142 Ga0207650_10000009 3300025925 Bacteria 483583
143 Ga0207650_10005783 3300025925 Bacteria 8437
144 Ga0207706_10000005 3300025933 Bacteria 224460
145 Ga0207686_10000129 3300025934 Bacteria 61050
146 Ga0207704_10000234 3300025938 Bacteria 27372
147 Ga0207711_10000854 3300025941 Bacteria 29448
148 Ga0207689_10001487 3300025942 Bacteria 22413
149 Ga0207689_10021626 3300025942 Bacteria 5409
150 Ga0207667_10069905 3300025949 Bacteria 3655
151 Ga0207712_10000110 3300025961 Bacteria 89234
152 Ga0207712_10001500 3300025961 Bacteria 15825
153 Ga0207640_10005667 3300025981 Bacteria 6805
154 Ga0207703_10053005 3300026035 Bacteria 3296
155 Ga0207703_10062995 3300026035 Bacteria 3039
156 Ga0207639_10013285 3300026041 Bacteria 5759
157 Ga0207708_10000017 3300026075 Bacteria 190414
158 Ga0207708_10024457 3300026075 Bacteria 4569
159 Ga0207708_10030995 3300026075 Bacteria 4058
160 Ga0207648_10000021 3300026089 Bacteria 139257
161 Ga0207648_10013692 3300026089 Bacteria 7531
162 Ga0207648_10016966 3300026089 Bacteria 6636
163 Ga0207676_10011940 3300026095 Bacteria 6215
164 Ga0207676_10043352 3300026095 Bacteria 3463
165 Ga0207674_10002058 3300026116 Bacteria 25521
166 Ga0207674_10078887 3300026116 Bacteria 3298
167 Ga0207675_100004745 3300026118 Bacteria 13090
168 Ga0207675_100011006 3300026118 Bacteria 8473
169 Ga0207675_100019431 3300026118 Bacteria 6338
170 Ga0207428_10006614 3300027907 Bacteria 10666
171 Ga0268264_10013803 3300028381 Bacteria 6644
172 Ga0307408_100016570 3300031548 Bacteria 4921
173 Ga0307405_10013792 3300031731 Bacteria 4321
174 Ga0307410_10007849 3300031852 Bacteria 5875
175 Ga0307406_10006896 3300031901 Bacteria 6290
176 Ga0307414_10008706 3300032004 Bacteria 5780
177 Ga0307411_10009023 3300032005 Bacteria 5214
178 Ga0307415_100023922 3300032126 Bacteria 3803
179 Ga0373927_0002680 3300035695 Bacteria 12980
180 Ga0453683_0044435 3300044673 Bacteria 2788
181 Ga0495594_0011098 3300046499 Bacteria 4678
182 Ga0495663_0000076 3300046525 Bacteria 44645
183 Ga0495598_0000940 3300046537 Bacteria 5622
184 Ga0495621_0000449 3300046539 Bacteria 10141
185 Ga0496108_0105328 3300048911 Bacteria 2408
186 Ga0501034_0061834 3300049571 Bacteria 3760
187 Ga0501038_0000491 3300049574 Bacteria 34796
188 Ga0501198_001006 3300049649 Bacteria 3583
189 Ga0501216_000669 3300049660 Bacteria 4203
190 Ga0501217_000896 3300049661 Bacteria 5311
191 Ga0501223_000893 3300049663 Bacteria 7071
192 Ga0501223_005782 3300049663 Unclassified 2585
193 Ga0501257_002164 3300049686 Bacteria 4114
194 Ga0501225_0001672 3300049705 Bacteria 6933
195 Ga0501234_001011 3300049707 Bacteria 4461
196 Ga0501081_0013458 3300049743 Bacteria 5379
197 Ga0501044_0054300 3300049823 Bacteria 4119
198 nmdc:mga05p37_182274_c1 3300050507 Bacteria 2554
199 nmdc:mga05p37_22163_c1 3300050507 Bacteria 7700
200 nmdc:mga06r32_57074_c1 3300050510 Bacteria 3750
201 nmdc:mga06r32_63125_c1 3300050510 Bacteria 3570
202 nmdc:mga08y16_10553_c1 3300050511 Bacteria 9696
203 nmdc:mga08y16_30398_c1 3300050511 Bacteria 5686
204 nmdc:mga0n895_25271_c1 3300050512 Bacteria 5610
205 nmdc:mga08x19_15448_c1 3300050514 Bacteria 4646
206 nmdc:mga0a205_121694_c1 3300050515 Bacteria 2509
207 nmdc:mga0a205_36285_c1 3300050515 Bacteria 4736
208 nmdc:mga0a205_78155_c1 3300050515 Bacteria 3197
209 Ga0075433_10030189
210 CNAas_1000912
211 JGI24751J29686_10000016
212 JGI25406J46586_10021742
213 Ga0065704_10072958
214 Ga0065715_10002411
215 Ga0065707_10001601
216 Ga0070670_100000124
217 Ga0070670_100001612
218 Ga0070670_100018754
219 Ga0070670_100071075
220 Ga0070680_100003830
221 Ga0070682_100000222
222 Ga0070691_10016186
223 Ga0070692_10004776
224 Ga0070669_100004055
225 Ga0070671_100020911
226 Ga0070671_100031488
227 Ga0070674_100000069
228 Ga0070703_10005550
229 Ga0070705_100004811
230 Ga0070700_100000005
231 Ga0070700_100020807
232 Ga0070694_100003084
233 Ga0070694_100025959
234 Ga0070694_100033676
235 Ga0070678_100035107
236 Ga0070662_100000926
237 Ga0070681_10000587
238 Ga0070681_10012793
239 Ga0068867_100002135
240 Ga0070706_100000085
241 Ga0070706_100006055
242 Ga0070707_100000064
243 Ga0070707_100000250
244 Ga0070699_100001190
245 Ga0070699_100029715
246 Ga0070679_100000486
247 Ga0068853_100060683
248 Ga0070686_100005278
249 Ga0070695_100041329
250 Ga0070696_100001080
251 Ga0070693_100002995
252 Ga0070693_100035599
253 Ga0068855_100064990
254 Ga0068857_100003396
255 Ga0068857_100015169
256 Ga0068854_100009968
257 Ga0070702_100002537
258 Ga0068859_100002350
259 Ga0068859_100020379
260 Ga0068859_100038648
261 Ga0068859_100042479
262 Ga0068864_100000669
263 Ga0068864_100043602
264 Ga0068866_10001133
265 Ga0068861_100013433
266 Ga0068861_100026428
267 Ga0068870_10022517
268 Ga0068858_100016805
269 Ga0068858_100039474
270 Ga0068858_100066558
271 Ga0068858_100067059
272 Ga0068860_100053451
273 Ga0068860_100083314
274 Ga0081455_10004755
275 Ga0081455_10008387
276 Ga0081455_10008866
277 Ga0081539_10001352
278 Ga0081539_10003635
279 Ga0081539_10004032
280 Ga0081539_10004630
281 Ga0081539_10029379
282 Ga0068871_100039910
283 Ga0075428_100007338
284 Ga0075431_100057759
285 Ga0075431_100112608
286 Ga0075433_10002423
287 Ga0075433_10003711
288 Ga0075433_10074127
289 Ga0075434_100002072
290 Ga0068865_100015163
291 Ga0068865_100027934
292 Ga0075436_100001353
293 Ga0097620_100002350
294 Ga0097620_100020379
295 Ga0097620_100038648
296 Ga0097620_100042478
297 Ga0105240_10026617
298 Ga0111539_10001352
299 Ga0111539_10001418
300 Ga0105247_10004877
301 Ga0114129_10040628
302 Ga0114129_10041122
303 Ga0105243_10028262
304 Ga0105243_10042800
305 Ga0105242_10023829
306 Ga0105242_10049014
307 Ga0105248_10008597
308 Ga0105248_10036625
309 Ga0105248_10073890
310 Ga0105248_10080880
311 Ga0105248_10136576
312 Ga0105237_10002381
313 Ga0105249_10000028
314 Ga0105239_10023708
315 Ga0105239_10148811
316 Ga0105246_10042275
317 Ga0157374_10009562
318 Ga0157378_10000788
319 Ga0157378_10004767
320 Ga0157378_10032022
321 Ga0157378_10113588
322 Ga0163162_10000027
323 Ga0163162_10013287
324 Ga0163162_10014915
325 Ga0163162_10038868
326 Ga0163162_10063742
327 Ga0157375_10024981
328 Ga0163163_10000241
329 Ga0163163_10000700
330 Ga0163163_10013010
331 Ga0163163_10068599
332 Ga0157380_10004178
333 Ga0157380_10012300
334 Ga0157379_10028150
335 Ga0157376_10033282
336 Ga0207653_10001104
337 Ga0207642_10000098
338 Ga0207710_10001693
339 Ga0207647_10046859
340 Ga0207684_10000091
341 Ga0207684_10040073
342 Ga0207707_10000003
343 Ga0207671_10001241
344 Ga0207671_10031070
345 Ga0207660_10001711
346 Ga0207652_10000729
347 Ga0207646_10000207
348 Ga0207646_10001788
349 Ga0207681_10001092
350 Ga0207650_10000009
351 Ga0207650_10005783
352 Ga0207706_10000005
353 Ga0207686_10000129
354 Ga0207704_10000234
355 Ga0207711_10000854
356 Ga0207689_10001487
357 Ga0207689_10021626
358 Ga0207667_10069905
359 Ga0207712_10000110
360 Ga0207712_10001500
361 Ga0207640_10005667
362 Ga0207703_10053005
363 Ga0207703_10062995
364 Ga0207639_10013285
365 Ga0207708_10000017
366 Ga0207708_10024457
367 Ga0207708_10030995
368 Ga0207648_10000021
369 Ga0207648_10013692
370 Ga0207648_10016966
371 Ga0207676_10011940
372 Ga0207676_10043352
373 Ga0207674_10002058
374 Ga0207674_10078887
375 Ga0207675_100004745
376 Ga0207675_100011006
377 Ga0207675_100019431
378 Ga0207428_10006614
379 Ga0268264_10013803
380 Ga0307408_100016570
381 Ga0307405_10013792
382 Ga0307410_10007849
383 Ga0307406_10006896
384 Ga0307414_10008706
385 Ga0307411_10009023
386 Ga0307415_100023922
387 Ga0373927_0002680
388 Ga0453683_0044435
389 Ga0495594_0011098
390 Ga0495663_0000076
391 Ga0495598_0000940
392 Ga0495621_0000449
393 Ga0496108_0105328
394 Ga0501034_0061834
395 Ga0501038_0000491
396 Ga0501198_001006
397 Ga0501216_000669
398 Ga0501217_000896
399 Ga0501223_000893
400 Ga0501223_005782
401 Ga0501257_002164
402 Ga0501225_0001672
403 Ga0501234_001011
404 Ga0501081_0013458
405 Ga0501044_0054300
406 nmdc:mga05p37_182274_c1
407 nmdc:mga05p37_22163_c1
408 nmdc:mga06r32_57074_c1
409 nmdc:mga06r32_63125_c1
410 nmdc:mga08y16_10553_c1
411 nmdc:mga08y16_30398_c1
412 nmdc:mga0n895_25271_c1
413 nmdc:mga08x19_15448_c1
414 nmdc:mga0a205_121694_c1
415 nmdc:mga0a205_36285_c1
416 nmdc:mga0a205_78155_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

770

884

0.96

PF02687

FtsX

FtsX-like permease family

359

483

0.94

PF12704

MacB_PCD

MacB-like periplasmic core domain

102

321

0.79

PF12704

MacB_PCD

MacB-like periplasmic core domain

504

737

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w7c-assembly1.cif.gz_B-2 heme exporter in the unliganded form 0.8286 649 771
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7601 53 260
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7571 53 261
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.728 59 257
8tzj-assembly1.cif.gz_D cryo-em structure of vibrio cholerae ftse/ftsx complex 0.7188 634 767
ID Description Score Start End Superfamily
af_K7L4D0_610_722_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.4881 447 621 2.30.29.30
af_B0UYT6_64_335_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.4361 594 662 3.40.640.10
af_A0A1D8PHC9_73_353_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.4151 594 654 3.40.640.10
af_Q54SF7_84_353_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.4121 594 658 3.40.640.10
3ramD02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.3988 425 630 3.30.70.360
ID Description Score Start End GO Terms
AF-A0A2V9KRE3-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9259 94 207
AF-A0A2V5XYM2-F1-model_v4 FtsX-like permease family protein 0.915 380 774 GO:0005886
GO:0022857
AF-A0A2V5XYM2-F1-model_v4 FtsX-like permease family protein 0.9128 380 774 GO:0005886
GO:0022857
AF-A0A2V5PPJ4-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9051 5 258 GO:0005886
GO:0022857
AF-A0A7V8NP20-F1-model_v4 FtsX-like permease family protein 0.9042 653 774 GO:0005886
GO:0022857

Map