F317650

General Info

Members Datasets Scaffolds Average Seq Length
208 130 416 150

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100481041|Ga0075428_1004810412
Length 160
Sequence VKVSTRGDYASRALLSLALHGDEAGPTSVRDIAERTGLPQPYLEQILLALKGAGLVRSKRGVGGGYVLARAPDAITFGLPHQDGACDHEGQCVLLAIWNVVGEHMRRHLDALTLADIASMARGQREWPELSDVESSDSALGEAASRTRRAGPSALTAREG

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
69 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
70 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
71 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
72 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
73 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
74 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
75 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
76 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
77 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
78 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
79 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
83 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
84 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
85 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
86 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
87 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
88 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
89 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
90 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
113 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
116 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
117 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
118 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
121 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
125 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
128 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
129 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.52
Metatranscriptomes 0.48
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.21
Nodule 0
Rhizoplane 5.29
Rhizosphere 81.25
Stem 0
Stem Tuber 0
Unclassified 3.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100481041 3300006844 Bacteria 1329
2 Ga0065704_10349668 3300005289 Bacteria 812
3 Ga0070673_101109982 3300005364 Bacteria 739
4 Ga0070673_101358776 3300005364 Bacteria 668
5 Ga0070667_100710888 3300005367 Bacteria 930
6 Ga0070701_10518052 3300005438 Bacteria 777
7 Ga0070663_100122883 3300005455 Bacteria 1963
8 Ga0068867_100213797 3300005459 Bacteria 1550
9 Ga0070706_100016743 3300005467 Bacteria 6770
10 Ga0070672_101277773 3300005543 Bacteria 655
11 Ga0068856_100057546 3300005614 Bacteria 3838
12 Ga0070702_100140043 3300005615 Bacteria 1540
13 Ga0068859_102546370 3300005617 Bacteria 563
14 Ga0068864_100252402 3300005618 Bacteria 1638
15 Ga0068861_100250188 3300005719 Bacteria 1512
16 Ga0068861_101935271 3300005719 Bacteria 587
17 Ga0068863_101286753 3300005841 Bacteria 738
18 Ga0068858_101393052 3300005842 Bacteria 691
19 Ga0068860_100043184 3300005843 Bacteria 4302
20 Ga0068860_100229430 3300005843 Bacteria 1804
21 Ga0081538_10055093 3300005981 Bacteria 2344
22 Ga0075365_10133326 3300006038 Bacteria 1720
23 Ga0075363_100133358 3300006048 Bacteria 1394
24 Ga0075362_10372553 3300006177 Bacteria 717
25 Ga0075367_10130266 3300006178 Bacteria 1554
26 Ga0075369_10024511 3300006186 Bacteria 2501
27 Ga0075428_100000321 3300006844 Bacteria 47452
28 Ga0075428_100148864 3300006844 Bacteria 2543
29 Ga0075428_100277938 3300006844 Bacteria 1802
30 Ga0075428_100894600 3300006844 Bacteria 942
31 Ga0075430_100016056 3300006846 Bacteria 6375
32 Ga0075430_100017609 3300006846 Bacteria 6084
33 Ga0075430_100032142 3300006846 Bacteria 4454
34 Ga0075430_100130580 3300006846 Bacteria 2094
35 Ga0075431_100000531 3300006847 Bacteria 31925
36 Ga0075431_100022176 3300006847 Bacteria 6494
37 Ga0075431_100031565 3300006847 Bacteria 5456
38 Ga0075429_100001711 3300006880 Bacteria 18143
39 Ga0075429_100049743 3300006880 Bacteria 3646
40 Ga0075429_100053815 3300006880 Bacteria 3502
41 Ga0097620_102546964 3300006931 Bacteria 563
42 Ga0111539_10017223 3300009094 Bacteria 8943
43 Ga0111539_10520267 3300009094 Bacteria 1386
44 Ga0111539_10575380 3300009094 Bacteria 1312
45 Ga0114129_10004205 3300009147 Bacteria 20343
46 Ga0114129_10026559 3300009147 Bacteria 8200
47 Ga0114129_10100862 3300009147 Bacteria 3994
48 Ga0114129_11742276 3300009147 Bacteria 759
49 Ga0105243_12368659 3300009148 Bacteria 569
50 Ga0105238_11401573 3300009551 Bacteria 726
51 Ga0163162_12044793 3300013306 Bacteria 657
52 Ga0157375_10068986 3300013308 Bacteria 3540
53 Ga0157375_10455088 3300013308 Bacteria 1445
54 Ga0163161_10142182 3300017792 Bacteria 1817
55 Ga0206354_10829568 3300020081 Bacteria 890
56 Ga0213875_10015128 3300021388 Bacteria 3757
57 Ga0207684_10037763 3300025910 Bacteria 4098
58 Ga0207681_10222207 3300025923 Bacteria 1462
59 Ga0207650_10080419 3300025925 Bacteria 2471
60 Ga0207706_10817752 3300025933 Unclassified 791
61 Ga0207686_11552749 3300025934 Bacteria 546
62 Ga0207704_10685363 3300025938 Bacteria 847
63 Ga0207691_10089863 3300025940 Bacteria 2753
64 Ga0207651_10569755 3300025960 Bacteria 987
65 Ga0207651_10995311 3300025960 Bacteria 749
66 Ga0207651_11236729 3300025960 Bacteria 671
67 Ga0207658_10245588 3300025986 Bacteria 1519
68 Ga0207703_11048030 3300026035 Unclassified 783
69 Ga0207641_10442565 3300026088 Bacteria 1255
70 Ga0207683_11466056 3300026121 Bacteria 630
71 Ga0268264_10045872 3300028381 Bacteria 3630
72 Ga0268264_10210639 3300028381 Bacteria 1784
73 Ga0307408_100554096 3300031548 Bacteria 1015
74 Ga0316576_10012155 3300031727 Bacteria 5678
75 Ga0316576_10091484 3300031727 Bacteria 2267
76 Ga0316576_10826066 3300031727 Bacteria 666
77 Ga0316578_10004064 3300031728 Bacteria 6839
78 Ga0307405_10699667 3300031731 Bacteria 839
79 Ga0316577_10112919 3300031733 Bacteria 1525
80 Ga0316577_10315802 3300031733 Bacteria 886
81 Ga0307413_10052879 3300031824 Bacteria 2456
82 Ga0307410_10261457 3300031852 Bacteria 1350
83 Ga0307406_10112700 3300031901 Bacteria 1876
84 Ga0307407_10354954 3300031903 Bacteria 1039
85 Ga0307409_100010540 3300031995 Bacteria 5755
86 Ga0307409_100613155 3300031995 Bacteria 1077
87 Ga0307416_100083646 3300032002 Bacteria 2709
88 Ga0307416_100586245 3300032002 Bacteria 1193
89 Ga0307414_10350390 3300032004 Bacteria 1267
90 Ga0307411_10543131 3300032005 Bacteria 990
91 Ga0307415_100021617 3300032126 Bacteria 3959
92 Ga0316574_0024287 3300035398 Bacteria 3626
93 Ga0316574_0137226 3300035398 Bacteria 1575
94 Ga0316574_0214842 3300035398 Bacteria 1233
95 Ga0316582_0301354 3300036647 Bacteria 1101
96 Ga0316584_0011290 3300036712 Bacteria 6270
97 Ga0316584_0062502 3300036712 Bacteria 2789
98 Ga0316584_0191214 3300036712 Bacteria 1513
99 Ga0316584_0546257 3300036712 Bacteria 809
100 Ga0436364_1445929 3300037853 Bacteria 1882
101 Ga0400483_021979 3300039062 Bacteria 72013
102 Ga0400483_029757 3300039062 Bacteria 3287
103 Ga0400483_118684 3300039062 Bacteria 1311
104 Ga0400483_162332 3300039062 Bacteria 54875
105 Ga0400483_229924 3300039062 Bacteria 4067
106 Ga0400483_292111 3300039062 Bacteria 2616
107 Ga0436363_0853647 3300039450 Bacteria 619
108 Ga0451787_143633 3300041441 Bacteria 582
109 Ga0451791_0071606 3300041451 Bacteria 621
110 Ga0451791_0127057 3300041451 Bacteria 782
111 Ga0451802_0928711 3300041460 Unclassified 725
112 Ga0451807_1081441 3300041486 Bacteria 561
113 Ga0451837_0868168 3300041494 Bacteria 880
114 Ga0451837_1180755 3300041494 Bacteria 1287
115 Ga0451845_0582767 3300041501 Bacteria 604
116 Ga0451853_0808981 3300041512 Bacteria 2262
117 Ga0439446_0034117 3300042156 Bacteria 1480
118 Ga0439434_0012331 3300042435 Bacteria 2529
119 Ga0439434_0182611 3300042435 Bacteria 703
120 Ga0450901_002436 3300042533 Bacteria 2007
121 Ga0495653_0219098 3300046463 Bacteria 1280
122 Ga0495628_0177603 3300046516 Bacteria 1612
123 Ga0495644_0134719 3300046523 Bacteria 942
124 Ga0495647_0035176 3300046681 Bacteria 1880
125 Ga0495647_0273039 3300046681 Bacteria 757
126 Ga0495658_0128369 3300046683 Bacteria 1541
127 Ga0495600_0539812 3300046809 Bacteria 713
128 Ga0495676_0174021 3300047321 Bacteria 1513
129 Ga0495680_0126672 3300047322 Bacteria 1880
130 Ga0495684_0057027 3300047471 Bacteria 2977
131 Ga0496100_0977052 3300048903 Bacteria 666
132 Ga0496108_0712806 3300048911 Bacteria 870
133 Ga0496109_0088611 3300048912 Bacteria 2860
134 Ga0496111_0139536 3300048914 Bacteria 1796
135 Ga0496112_1931193 3300048915 Bacteria 502
136 Ga0496114_0026287 3300048917 Bacteria 4764
137 Ga0501034_0002748 3300049571 Bacteria 20688
138 Ga0501037_0066849 3300049573 Bacteria 2618
139 Ga0501039_0162498 3300049575 Bacteria 1756
140 Ga0501041_0640057 3300049577 Unclassified 679
141 Ga0501042_0229293 3300049578 Bacteria 1340
142 Ga0501067_0016036 3300049583 Bacteria 4144
143 Ga0501068_0000142 3300049584 Bacteria 32620
144 Ga0501068_0070306 3300049584 Bacteria 2135
145 Ga0501069_0001986 3300049585 Bacteria 10235
146 Ga0501069_0838159 3300049585 Bacteria 558
147 Ga0501070_0000439 3300049586 Bacteria 37789
148 Ga0501070_0059646 3300049586 Bacteria 3163
149 Ga0501071_0097879 3300049587 Bacteria 2160
150 Ga0501071_0144876 3300049587 Bacteria 1770
151 Ga0501071_0417155 3300049587 Bacteria 1026
152 Ga0501072_0002611 3300049588 Bacteria 13493
153 Ga0501072_0199594 3300049588 Bacteria 1595
154 Ga0501072_0286452 3300049588 Bacteria 1310
155 Ga0501073_0015242 3300049589 Bacteria 5576
156 Ga0501073_0023515 3300049589 Bacteria 4424
157 Ga0501074_0045663 3300049590 Bacteria 3168
158 Ga0501074_0449090 3300049590 Bacteria 914
159 Ga0501076_0116749 3300049592 Bacteria 2160
160 Ga0501076_0823401 3300049592 Bacteria 766
161 Ga0501077_1076902 3300049593 Unclassified 517
162 Ga0501079_0055532 3300049741 Bacteria 3056
163 Ga0501079_0152272 3300049741 Unclassified 1803
164 Ga0501079_0372887 3300049741 Bacteria 1119
165 Ga0501080_0010620 3300049742 Bacteria 8429
166 Ga0501080_0012410 3300049742 Bacteria 7811
167 Ga0501080_0305400 3300049742 Bacteria 1442
168 Ga0501080_0457712 3300049742 Bacteria 1143
169 Ga0501081_0386196 3300049743 Bacteria 1035
170 Ga0501083_0001325 3300049744 Bacteria 16788
171 Ga0501083_0004155 3300049744 Bacteria 10198
172 Ga0501083_0040169 3300049744 Bacteria 3176
173 Ga0501044_0396172 3300049823 Bacteria 1294
174 Ga0501045_0805050 3300049824 Bacteria 692
175 nmdc:mga03n38_499087_c1 3300050490 Bacteria 683
176 nmdc:mga00v17_220919_c1 3300050491 Unclassified 1227
177 nmdc:mga00v17_568051_c1 3300050491 Bacteria 733
178 nmdc:mga00v17_691541_c1 3300050491 Bacteria 654
179 nmdc:mga0yw44_144678_c1 3300050492 Bacteria 1547
180 nmdc:mga0yw44_20500_c1 3300050492 Bacteria 3670
181 nmdc:mga0yw44_509732_c1 3300050492 Bacteria 816
182 nmdc:mga05p37_1360_c1 3300050507 Bacteria 28441
183 nmdc:mga05p37_138590_c1 3300050507 Bacteria 2981
184 nmdc:mga05p37_86572_c1 3300050507 Bacteria 3862
185 nmdc:mga05p37_964559_c1 3300050507 Bacteria 911
186 nmdc:mga09592_197006_c1 3300050508 Bacteria 1744
187 nmdc:mga09592_71582_c1 3300050508 Bacteria 2943
188 nmdc:mga09592_856752_c1 3300050508 Bacteria 766
189 nmdc:mga09592_915_c1 3300050508 Bacteria 23211
190 nmdc:mga0qj67_164257_c1 3300050509 Bacteria 1802
191 nmdc:mga0qj67_3050_c1 3300050509 Bacteria 12034
192 nmdc:mga0qj67_7233_c1 3300050509 Bacteria 8200
193 nmdc:mga06r32_11563_c1 3300050510 Bacteria 7950
194 nmdc:mga06r32_1238468_c1 3300050510 Bacteria 692
195 nmdc:mga06r32_17503_c1 3300050510 Bacteria 6542
196 nmdc:mga06r32_272330_c1 3300050510 Bacteria 1177
197 nmdc:mga08y16_60415_c1 3300050511 Bacteria 3959
198 nmdc:mga0a205_1197426_c1 3300050515 Bacteria 607
199 nmdc:mga0sz30_316760_c1 3300050516 Bacteria 696
200 Ga0495601_0198493 3300053077 Bacteria 1311
201 Ga0495619_0243327 3300053085 Bacteria 1246
202 Ga0500568_0024577 3300053139 Bacteria 2550
203 Ga0500616_0000994 3300053153 Bacteria 30646
204 Ga0501084_0002483 3300054114 Bacteria 14850
205 Ga0501084_0094752 3300054114 Bacteria 2507
206 Ga0501084_0211111 3300054114 Bacteria 1638
207 Ga0501084_0461341 3300054114 Bacteria 1074
208 Ga0501084_0872540 3300054114 Bacteria 757
209 Ga0075428_100481041
210 Ga0065704_10349668
211 Ga0070673_101109982
212 Ga0070673_101358776
213 Ga0070667_100710888
214 Ga0070701_10518052
215 Ga0070663_100122883
216 Ga0068867_100213797
217 Ga0070706_100016743
218 Ga0070672_101277773
219 Ga0068856_100057546
220 Ga0070702_100140043
221 Ga0068859_102546370
222 Ga0068864_100252402
223 Ga0068861_100250188
224 Ga0068861_101935271
225 Ga0068863_101286753
226 Ga0068858_101393052
227 Ga0068860_100043184
228 Ga0068860_100229430
229 Ga0081538_10055093
230 Ga0075365_10133326
231 Ga0075363_100133358
232 Ga0075362_10372553
233 Ga0075367_10130266
234 Ga0075369_10024511
235 Ga0075428_100000321
236 Ga0075428_100148864
237 Ga0075428_100277938
238 Ga0075428_100894600
239 Ga0075430_100016056
240 Ga0075430_100017609
241 Ga0075430_100032142
242 Ga0075430_100130580
243 Ga0075431_100000531
244 Ga0075431_100022176
245 Ga0075431_100031565
246 Ga0075429_100001711
247 Ga0075429_100049743
248 Ga0075429_100053815
249 Ga0097620_102546964
250 Ga0111539_10017223
251 Ga0111539_10520267
252 Ga0111539_10575380
253 Ga0114129_10004205
254 Ga0114129_10026559
255 Ga0114129_10100862
256 Ga0114129_11742276
257 Ga0105243_12368659
258 Ga0105238_11401573
259 Ga0163162_12044793
260 Ga0157375_10068986
261 Ga0157375_10455088
262 Ga0163161_10142182
263 Ga0206354_10829568
264 Ga0213875_10015128
265 Ga0207684_10037763
266 Ga0207681_10222207
267 Ga0207650_10080419
268 Ga0207706_10817752
269 Ga0207686_11552749
270 Ga0207704_10685363
271 Ga0207691_10089863
272 Ga0207651_10569755
273 Ga0207651_10995311
274 Ga0207651_11236729
275 Ga0207658_10245588
276 Ga0207703_11048030
277 Ga0207641_10442565
278 Ga0207683_11466056
279 Ga0268264_10045872
280 Ga0268264_10210639
281 Ga0307408_100554096
282 Ga0316576_10012155
283 Ga0316576_10091484
284 Ga0316576_10826066
285 Ga0316578_10004064
286 Ga0307405_10699667
287 Ga0316577_10112919
288 Ga0316577_10315802
289 Ga0307413_10052879
290 Ga0307410_10261457
291 Ga0307406_10112700
292 Ga0307407_10354954
293 Ga0307409_100010540
294 Ga0307409_100613155
295 Ga0307416_100083646
296 Ga0307416_100586245
297 Ga0307414_10350390
298 Ga0307411_10543131
299 Ga0307415_100021617
300 Ga0316574_0024287
301 Ga0316574_0137226
302 Ga0316574_0214842
303 Ga0316582_0301354
304 Ga0316584_0011290
305 Ga0316584_0062502
306 Ga0316584_0191214
307 Ga0316584_0546257
308 Ga0436364_1445929
309 Ga0400483_021979
310 Ga0400483_029757
311 Ga0400483_118684
312 Ga0400483_162332
313 Ga0400483_229924
314 Ga0400483_292111
315 Ga0436363_0853647
316 Ga0451787_143633
317 Ga0451791_0071606
318 Ga0451791_0127057
319 Ga0451802_0928711
320 Ga0451807_1081441
321 Ga0451837_0868168
322 Ga0451837_1180755
323 Ga0451845_0582767
324 Ga0451853_0808981
325 Ga0439446_0034117
326 Ga0439434_0012331
327 Ga0439434_0182611
328 Ga0450901_002436
329 Ga0495653_0219098
330 Ga0495628_0177603
331 Ga0495644_0134719
332 Ga0495647_0035176
333 Ga0495647_0273039
334 Ga0495658_0128369
335 Ga0495600_0539812
336 Ga0495676_0174021
337 Ga0495680_0126672
338 Ga0495684_0057027
339 Ga0496100_0977052
340 Ga0496108_0712806
341 Ga0496109_0088611
342 Ga0496111_0139536
343 Ga0496112_1931193
344 Ga0496114_0026287
345 Ga0501034_0002748
346 Ga0501037_0066849
347 Ga0501039_0162498
348 Ga0501041_0640057
349 Ga0501042_0229293
350 Ga0501067_0016036
351 Ga0501068_0000142
352 Ga0501068_0070306
353 Ga0501069_0001986
354 Ga0501069_0838159
355 Ga0501070_0000439
356 Ga0501070_0059646
357 Ga0501071_0097879
358 Ga0501071_0144876
359 Ga0501071_0417155
360 Ga0501072_0002611
361 Ga0501072_0199594
362 Ga0501072_0286452
363 Ga0501073_0015242
364 Ga0501073_0023515
365 Ga0501074_0045663
366 Ga0501074_0449090
367 Ga0501076_0116749
368 Ga0501076_0823401
369 Ga0501077_1076902
370 Ga0501079_0055532
371 Ga0501079_0152272
372 Ga0501079_0372887
373 Ga0501080_0010620
374 Ga0501080_0012410
375 Ga0501080_0305400
376 Ga0501080_0457712
377 Ga0501081_0386196
378 Ga0501083_0001325
379 Ga0501083_0004155
380 Ga0501083_0040169
381 Ga0501044_0396172
382 Ga0501045_0805050
383 nmdc:mga03n38_499087_c1
384 nmdc:mga00v17_220919_c1
385 nmdc:mga00v17_568051_c1
386 nmdc:mga00v17_691541_c1
387 nmdc:mga0yw44_144678_c1
388 nmdc:mga0yw44_20500_c1
389 nmdc:mga0yw44_509732_c1
390 nmdc:mga05p37_1360_c1
391 nmdc:mga05p37_138590_c1
392 nmdc:mga05p37_86572_c1
393 nmdc:mga05p37_964559_c1
394 nmdc:mga09592_197006_c1
395 nmdc:mga09592_71582_c1
396 nmdc:mga09592_856752_c1
397 nmdc:mga09592_915_c1
398 nmdc:mga0qj67_164257_c1
399 nmdc:mga0qj67_3050_c1
400 nmdc:mga0qj67_7233_c1
401 nmdc:mga06r32_11563_c1
402 nmdc:mga06r32_1238468_c1
403 nmdc:mga06r32_17503_c1
404 nmdc:mga06r32_272330_c1
405 nmdc:mga08y16_60415_c1
406 nmdc:mga0a205_1197426_c1
407 nmdc:mga0sz30_316760_c1
408 Ga0495601_0198493
409 Ga0495619_0243327
410 Ga0500568_0024577
411 Ga0500616_0000994
412 Ga0501084_0002483
413 Ga0501084_0094752
414 Ga0501084_0211111
415 Ga0501084_0461341
416 Ga0501084_0872540

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02082

Rrf2

Iron-dependent Transcriptional regulator

3

79

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hf0-assembly1.cif.gz_B crystal structure of apo iscr 0.9082 3 143
6cda-assembly1.cif.gz_A-2 crystal structure of l34a czra in the zn(ii)bound state 0.9021 12 72
4hf0-assembly1.cif.gz_B crystal structure of apo iscr 0.901 3 143
4hf0-assembly1.cif.gz_A crystal structure of apo iscr 0.8931 3 138
1r1u-assembly1.cif.gz_B crystal structure of the metal-sensing transcriptional repressor czra from staphylococcus aureus in the apo-form 0.8918 12 72
ID Description Score Start End Superfamily
5zuoA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8918 29 72 1.10.10.10
4hobC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8905 10 59 1.10.10.10
af_O53838_4_115_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8836 11 72 1.10.10.10
4hf2A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8748 3 135 1.10.10.10
5aipB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8728 10 70 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A382BWC2-F1-model_v4 Rrf2 family transcriptional regulator 0.9343 6 135 GO:0003700
GO:0005829
AF-A0A1M4S538-F1-model_v4 Transcriptional regulator, BadM/Rrf2 family 0.9315 3 145 GO:0003700
GO:0005829
AF-A0A381SFS3-F1-model_v4 Rrf2 family transcriptional regulator 0.9247 1 148 GO:0003700
GO:0005829
AF-A0A6J7PT77-F1-model_v4 Unannotated protein 0.9244 2 151 GO:0003700
GO:0005829
AF-A0A382BWC2-F1-model_v4 Rrf2 family transcriptional regulator 0.9207 6 135 GO:0003700
GO:0005829

Map