F317512

General Info

Members Datasets Scaffolds Average Seq Length
208 163 416 413

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100001731|Ga0070699_1000017316
Length 464
Sequence MTQADVIAAFVDRDFPRETEFLAELVRVPSDNPPGDCAAHAKRARQLLDRLGLAVETHEVPRAAVEAAGMKSVTNLIVRHRFGDGLVVALNAHGDVVPPGLGWRLDPYGAVIEDGAHGPVMYGRGVAVSKSDFASYTWALLALKAAAVQGGKLGGTLELHFTYDEEAGGIVGPKWLLDQGLVRPDAVIAAGFSYSVVTAHNGCLHLEVTVTGKQAHAAMPEAGVDALEATNAILAALYAHRATLPRIRSGTAGIVSPTLNVGLIKGGINTNVVPDQVVFRIDRRVIPEENPAEVEAELRELIATSARHNLQIKVAVRQLLSAAPLRPQPGTDRIVAAIQRRAKQILGVDAPVTGVPLYTDARHYAAAGIPIVLYGAGPRSIREANAHDANENLRLDDLRAATKIVALAVRFVRGRARSCLTRQSRCTAVAAVGLRQRSPFSFSLRSSTTFHTNGGKMCAPRRAH

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
39 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
41 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
42 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
77 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
78 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
79 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
80 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
88 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
89 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
93 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
94 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
97 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
98 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
99 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
100 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
103 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
123 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
137 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
146 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
147 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
148 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
149 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
155 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
156 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
157 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
158 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
159 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
160 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
161 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
162 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
163 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.67
Metatranscriptomes 0
Isolates 4.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.46
Nodule 1.44
Rhizoplane 15.87
Rhizosphere 62.98
Stem 0
Stem Tuber 0
Unclassified 0.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100001731 3300005518 Bacteria 19907
2 JGI25151J46595_10000619 3300003187 Bacteria 30988
3 JGI25160J50197_1014284 3300003354 Bacteria 2663
4 Ga0065707_10082537 3300005295 Bacteria 14012
5 Ga0070671_100035387 3300005355 Bacteria 4137
6 Ga0070709_10038154 3300005434 Bacteria 2940
7 Ga0070709_10071423 3300005434 Bacteria 2241
8 Ga0070714_100101894 3300005435 Bacteria 2530
9 Ga0070713_100028902 3300005436 Bacteria 4381
10 Ga0070710_10003861 3300005437 Bacteria 7092
11 Ga0070711_100049965 3300005439 Bacteria 2865
12 Ga0070665_100160797 3300005548 Bacteria 2248
13 Ga0070665_100421435 3300005548 Bacteria 1344
14 Ga0068854_100012197 3300005578 Bacteria 5623
15 Ga0070702_100002826 3300005615 Bacteria 7617
16 Ga0068861_100019223 3300005719 Bacteria 4881
17 Ga0068861_100028367 3300005719 Bacteria 4083
18 Ga0068860_100141653 3300005843 Bacteria 2311
19 Ga0068860_100217545 3300005843 Bacteria 1854
20 Ga0081455_10006628 3300005937 Bacteria 12385
21 Ga0081455_10009502 3300005937 Bacteria 9993
22 Ga0081455_10044675 3300005937 Bacteria 3862
23 Ga0081540_1023454 3300005983 Bacteria 3608
24 Ga0070717_10056263 3300006028 Bacteria 3249
25 Ga0070717_10157365 3300006028 Bacteria 1969
26 Ga0075365_10020668 3300006038 Bacteria 4087
27 Ga0075365_10077174 3300006038 Bacteria 2250
28 Ga0075368_10021912 3300006042 Bacteria 2429
29 Ga0075368_10021929 3300006042 Bacteria 2429
30 Ga0075363_100016860 3300006048 Bacteria 3613
31 Ga0070715_10006603 3300006163 Bacteria 3954
32 Ga0070716_100029901 3300006173 Bacteria 2950
33 Ga0075362_10016095 3300006177 Bacteria 3056
34 Ga0075366_10038564 3300006195 Bacteria 2822
35 Ga0075370_10035248 3300006353 Bacteria 2808
36 Ga0075430_100173748 3300006846 Bacteria 1793
37 Ga0075431_100034620 3300006847 Bacteria 5203
38 Ga0075431_100042547 3300006847 Bacteria 4686
39 Ga0075433_10027160 3300006852 Bacteria 4853
40 Ga0075434_100056679 3300006871 Bacteria 3894
41 Ga0099826_10032561 3300006948 Unclassified 3755
42 Ga0099826_10071714 3300006948 Unclassified 2196
43 Ga0111539_10047160 3300009094 Bacteria 5151
44 Ga0114129_10015608 3300009147 Bacteria 10801
45 Ga0105248_10097006 3300009177 Bacteria 3321
46 Ga0163163_10009179 3300014325 Bacteria 8814
47 Ga0157380_10001750 3300014326 Bacteria 14328
48 Ga0157376_10055018 3300014969 Bacteria 3319
49 Ga0213871_10019027 3300021441 Bacteria 1687
50 Ga0209130_1001232 3300025284 Bacteria 17970
51 Ga0209025_1000152 3300025294 Bacteria 171558
52 Ga0209758_1008712 3300025297 Bacteria 6487
53 Ga0207426_1000333 3300025302 Bacteria 88786
54 Ga0207653_10005240 3300025885 Bacteria 4051
55 Ga0207692_10033409 3300025898 Bacteria 2481
56 Ga0207710_10022273 3300025900 Bacteria 2719
57 Ga0207688_10001736 3300025901 Bacteria 11572
58 Ga0207647_10012456 3300025904 Bacteria 5918
59 Ga0207685_10021437 3300025905 Bacteria 2165
60 Ga0207699_10041522 3300025906 Bacteria 2658
61 Ga0207699_10043996 3300025906 Bacteria 2597
62 Ga0207643_10013382 3300025908 Bacteria 4443
63 Ga0207684_10014693 3300025910 Bacteria 6744
64 Ga0207671_10149929 3300025914 Bacteria 1801
65 Ga0207693_10026036 3300025915 Bacteria 4632
66 Ga0207662_10005187 3300025918 Bacteria 6914
67 Ga0207657_10091666 3300025919 Bacteria 2533
68 Ga0207700_10054774 3300025928 Bacteria 2995
69 Ga0207664_10017925 3300025929 Bacteria 5202
70 Ga0207644_10030837 3300025931 Bacteria 3732
71 Ga0207706_10006181 3300025933 Bacteria 11121
72 Ga0207665_10002835 3300025939 Bacteria 11632
73 Ga0207691_10002182 3300025940 Bacteria 19131
74 Ga0207668_10064125 3300025972 Bacteria 2595
75 Ga0207678_10011668 3300026067 Bacteria 7716
76 Ga0207708_10003873 3300026075 Bacteria 11012
77 Ga0207648_10010196 3300026089 Bacteria 8934
78 Ga0207676_10250064 3300026095 Bacteria 1595
79 Ga0207674_10041705 3300026116 Bacteria 4745
80 Ga0207675_100027875 3300026118 Bacteria 5261
81 Ga0207675_100032237 3300026118 Bacteria 4882
82 Ga0207698_10006761 3300026142 Bacteria 7164
83 Ga0268266_10252708 3300028379 Bacteria 1631
84 Ga0307511_10000001 3300030521 Bacteria 206079
85 Ga0265325_10030103 3300031241 Bacteria 2913
86 Ga0265313_10049284 3300031595 Bacteria 2028
87 Ga0307508_10027578 3300031616 Bacteria 5139
88 Ga0265342_10038775 3300031712 Bacteria 2900
89 Ga0307507_10023479 3300033179 Bacteria 6768
90 Ga0373944_0014205 3300035089 Bacteria 2220
91 Ga0373945_0002564 3300035116 Bacteria 5687
92 Ga0373943_0042836 3300035170 Bacteria 2195
93 Ga0373946_0013345 3300035171 Bacteria 3088
94 Ga0373955_0098308 3300035172 Bacteria 1677
95 Ga0373931_0117401 3300035691 Bacteria 1517
96 Ga0395899_0036517 3300037312 Bacteria 3686
97 Ga0395905_0076129 3300037471 Bacteria 3145
98 Ga0436364_1146829 3300037853 Bacteria 2259
99 Ga0436365_0220830 3300039437 Bacteria 3035
100 Ga0436360_0746039 3300039438 Bacteria 4089
101 Ga0436361_0149207 3300039447 Bacteria 7263
102 Ga0436362_0421473 3300039453 Bacteria 2490
103 Ga0495629_0030865 3300046459 Bacteria 3797
104 Ga0495638_0001165 3300046460 Bacteria 25305
105 Ga0495641_0023781 3300046461 Bacteria 3036
106 Ga0495584_0012502 3300046491 Bacteria 4333
107 Ga0495594_0035308 3300046499 Bacteria 2723
108 Ga0495610_0007366 3300046512 Bacteria 7344
109 Ga0495640_0086722 3300046533 Bacteria 2072
110 Ga0495656_0011986 3300046615 Bacteria 3191
111 Ga0495668_0057286 3300046616 Bacteria 2151
112 Ga0495625_0003547 3300046660 Bacteria 15416
113 Ga0495588_0089313 3300046674 Bacteria 1613
114 Ga0495658_0117768 3300046683 Bacteria 1603
115 Ga0495624_0064077 3300046690 Bacteria 2297
116 Ga0495649_0011526 3300046694 Bacteria 5180
117 Ga0495672_0059355 3300047320 Bacteria 2214
118 Ga0495614_0038581 3300048089 Bacteria 2050
119 Ga0496100_0017987 3300048903 Bacteria 4184
120 Ga0496100_0151575 3300048903 Bacteria 1654
121 Ga0496101_0075406 3300048904 Bacteria 2483
122 Ga0496101_0107047 3300048904 Bacteria 2100
123 Ga0496102_0033398 3300048905 Bacteria 4623
124 Ga0496103_0010189 3300048906 Bacteria 5557
125 Ga0496104_0002965 3300048907 Bacteria 14626
126 Ga0496104_0039090 3300048907 Bacteria 4441
127 Ga0496104_0167261 3300048907 Bacteria 2108
128 Ga0496105_0033069 3300048908 Bacteria 4245
129 Ga0496106_0024229 3300048909 Bacteria 4510
130 Ga0496108_0004725 3300048911 Bacteria 10981
131 Ga0496108_0013574 3300048911 Bacteria 6647
132 Ga0496108_0221406 3300048911 Bacteria 1644
133 Ga0496109_0099688 3300048912 Bacteria 2694
134 Ga0496109_0203874 3300048912 Bacteria 1860
135 Ga0496109_0269387 3300048912 Bacteria 1604
136 Ga0496109_0282028 3300048912 Bacteria 1566
137 Ga0496110_0004379 3300048913 Bacteria 10935
138 Ga0496110_0024703 3300048913 Bacteria 5124
139 Ga0496110_0033747 3300048913 Bacteria 4429
140 Ga0496110_0134870 3300048913 Bacteria 2230
141 Ga0496111_0014667 3300048914 Bacteria 5358
142 Ga0496111_0016962 3300048914 Bacteria 5027
143 Ga0496111_0082641 3300048914 Bacteria 2346
144 Ga0496112_0000904 3300048915 Bacteria 21386
145 Ga0496112_0212868 3300048915 Bacteria 1889
146 Ga0496112_0292195 3300048915 Bacteria 1576
147 Ga0496112_0372693 3300048915 Bacteria 1369
148 Ga0496113_0022735 3300048916 Bacteria 4439
149 Ga0496114_0262956 3300048917 Bacteria 1519
150 Ga0496114_0284045 3300048917 Bacteria 1459
151 Ga0496115_0002996 3300048918 Bacteria 12131
152 Ga0496118_0114681 3300048921 Bacteria 1776
153 Ga0495682_0055262 3300049460 Bacteria 1440
154 Ga0501042_0211997 3300049578 Bacteria 1397
155 Ga0501046_0170307 3300049580 Bacteria 1635
156 Ga0501072_0005258 3300049588 Bacteria 9855
157 Ga0501072_0043838 3300049588 Bacteria 3517
158 Ga0501072_0072663 3300049588 Bacteria 2719
159 Ga0501072_0105758 3300049588 Bacteria 2238
160 Ga0501075_0002380 3300049591 Bacteria 12510
161 Ga0501075_0096296 3300049591 Bacteria 2246
162 Ga0501076_0004504 3300049592 Bacteria 9925
163 Ga0501076_0102403 3300049592 Bacteria 2308
164 Ga0501077_0090926 3300049593 Bacteria 1934
165 Ga0501079_0080165 3300049741 Bacteria 2524
166 Ga0501079_0093433 3300049741 Bacteria 2331
167 Ga0501079_0158529 3300049741 Bacteria 1764
168 Ga0501079_0290496 3300049741 Bacteria 1278
169 Ga0501080_0383156 3300049742 Bacteria 1267
170 Ga0501081_0266441 3300049743 Bacteria 1252
171 Ga0501044_0046190 3300049823 Bacteria 4510
172 Ga0501044_0297122 3300049823 Bacteria 1545
173 Ga0501045_0098368 3300049824 Bacteria 2165
174 nmdc:mga03n38_7450_c1 3300050490 Bacteria 3874
175 nmdc:mga0yw44_11812_c1 3300050492 Bacteria 4527
176 nmdc:mga0yw44_31926_c2 3300050492 Bacteria 2033
177 nmdc:mga0k408_64495_c1 3300050493 Bacteria 2132
178 nmdc:mga06z11_76458_c1 3300050494 Bacteria 1785
179 nmdc:mga07m45_12528_c1 3300050496 Bacteria 4483
180 nmdc:mga09592_58080_c1 3300050508 Bacteria 3272
181 nmdc:mga0qj67_72857_c1 3300050509 Bacteria 2743
182 nmdc:mga06r32_86668_c1 3300050510 Bacteria 3054
183 nmdc:mga08y16_21157_c1 3300050511 Bacteria 6867
184 nmdc:mga08y16_71750_c1 3300050511 Bacteria 3608
185 nmdc:mga0sz30_2423_c1 3300050516 Bacteria 6646
186 Ga0495601_0122447 3300053077 Bacteria 1690
187 Ga0500646_0000184 3300053090 Bacteria 18721
188 Ga0500583_0035131 3300053092 Bacteria 2234
189 Ga0500594_0001293 3300053118 Bacteria 5436
190 Ga0500568_0021685 3300053139 Bacteria 2760
191 Ga0500604_0000501 3300053151 Bacteria 10800
192 Ga0500616_0006292 3300053153 Bacteria 7802
193 Ga0500622_0001099 3300053156 Bacteria 22506
194 Ga0501084_0328190 3300054114 Bacteria 1292
195 Ga0501082_0000012 3300060353 Bacteria 119898
196 Ga0501082_0014967 3300060353 Bacteria 6685
197 Ga0530510_0085843 3300061734 Bacteria 2293
198 Ga0530510_0098183 3300061734 Bacteria 2142
199 Ga0530510_0102404 3300061734 Bacteria 2094
200 2523107961 2522572158 Bacteria 6514390
201 2550695318 2548876994 Bacteria 4904866
202 2599102318 2597490356 Bacteria 7030811
203 2821445938 2821443989 Bacteria 7658172
204 2844537973 2844533157 Bacteria 7517899
205 2846956982 2846952575 Bacteria 6587527
206 2848861486 2848858292 Bacteria 7391279
207 2906646475 2906643746 Bacteria 8722424
208 2908670556 2908669403 Bacteria 5740494
209 Ga0070699_100001731
210 JGI25151J46595_10000619
211 JGI25160J50197_1014284
212 Ga0065707_10082537
213 Ga0070671_100035387
214 Ga0070709_10038154
215 Ga0070709_10071423
216 Ga0070714_100101894
217 Ga0070713_100028902
218 Ga0070710_10003861
219 Ga0070711_100049965
220 Ga0070665_100160797
221 Ga0070665_100421435
222 Ga0068854_100012197
223 Ga0070702_100002826
224 Ga0068861_100019223
225 Ga0068861_100028367
226 Ga0068860_100141653
227 Ga0068860_100217545
228 Ga0081455_10006628
229 Ga0081455_10009502
230 Ga0081455_10044675
231 Ga0081540_1023454
232 Ga0070717_10056263
233 Ga0070717_10157365
234 Ga0075365_10020668
235 Ga0075365_10077174
236 Ga0075368_10021912
237 Ga0075368_10021929
238 Ga0075363_100016860
239 Ga0070715_10006603
240 Ga0070716_100029901
241 Ga0075362_10016095
242 Ga0075366_10038564
243 Ga0075370_10035248
244 Ga0075430_100173748
245 Ga0075431_100034620
246 Ga0075431_100042547
247 Ga0075433_10027160
248 Ga0075434_100056679
249 Ga0099826_10032561
250 Ga0099826_10071714
251 Ga0111539_10047160
252 Ga0114129_10015608
253 Ga0105248_10097006
254 Ga0163163_10009179
255 Ga0157380_10001750
256 Ga0157376_10055018
257 Ga0213871_10019027
258 Ga0209130_1001232
259 Ga0209025_1000152
260 Ga0209758_1008712
261 Ga0207426_1000333
262 Ga0207653_10005240
263 Ga0207692_10033409
264 Ga0207710_10022273
265 Ga0207688_10001736
266 Ga0207647_10012456
267 Ga0207685_10021437
268 Ga0207699_10041522
269 Ga0207699_10043996
270 Ga0207643_10013382
271 Ga0207684_10014693
272 Ga0207671_10149929
273 Ga0207693_10026036
274 Ga0207662_10005187
275 Ga0207657_10091666
276 Ga0207700_10054774
277 Ga0207664_10017925
278 Ga0207644_10030837
279 Ga0207706_10006181
280 Ga0207665_10002835
281 Ga0207691_10002182
282 Ga0207668_10064125
283 Ga0207678_10011668
284 Ga0207708_10003873
285 Ga0207648_10010196
286 Ga0207676_10250064
287 Ga0207674_10041705
288 Ga0207675_100027875
289 Ga0207675_100032237
290 Ga0207698_10006761
291 Ga0268266_10252708
292 Ga0307511_10000001
293 Ga0265325_10030103
294 Ga0265313_10049284
295 Ga0307508_10027578
296 Ga0265342_10038775
297 Ga0307507_10023479
298 Ga0373944_0014205
299 Ga0373945_0002564
300 Ga0373943_0042836
301 Ga0373946_0013345
302 Ga0373955_0098308
303 Ga0373931_0117401
304 Ga0395899_0036517
305 Ga0395905_0076129
306 Ga0436364_1146829
307 Ga0436365_0220830
308 Ga0436360_0746039
309 Ga0436361_0149207
310 Ga0436362_0421473
311 Ga0495629_0030865
312 Ga0495638_0001165
313 Ga0495641_0023781
314 Ga0495584_0012502
315 Ga0495594_0035308
316 Ga0495610_0007366
317 Ga0495640_0086722
318 Ga0495656_0011986
319 Ga0495668_0057286
320 Ga0495625_0003547
321 Ga0495588_0089313
322 Ga0495658_0117768
323 Ga0495624_0064077
324 Ga0495649_0011526
325 Ga0495672_0059355
326 Ga0495614_0038581
327 Ga0496100_0017987
328 Ga0496100_0151575
329 Ga0496101_0075406
330 Ga0496101_0107047
331 Ga0496102_0033398
332 Ga0496103_0010189
333 Ga0496104_0002965
334 Ga0496104_0039090
335 Ga0496104_0167261
336 Ga0496105_0033069
337 Ga0496106_0024229
338 Ga0496108_0004725
339 Ga0496108_0013574
340 Ga0496108_0221406
341 Ga0496109_0099688
342 Ga0496109_0203874
343 Ga0496109_0269387
344 Ga0496109_0282028
345 Ga0496110_0004379
346 Ga0496110_0024703
347 Ga0496110_0033747
348 Ga0496110_0134870
349 Ga0496111_0014667
350 Ga0496111_0016962
351 Ga0496111_0082641
352 Ga0496112_0000904
353 Ga0496112_0212868
354 Ga0496112_0292195
355 Ga0496112_0372693
356 Ga0496113_0022735
357 Ga0496114_0262956
358 Ga0496114_0284045
359 Ga0496115_0002996
360 Ga0496118_0114681
361 Ga0495682_0055262
362 Ga0501042_0211997
363 Ga0501046_0170307
364 Ga0501072_0005258
365 Ga0501072_0043838
366 Ga0501072_0072663
367 Ga0501072_0105758
368 Ga0501075_0002380
369 Ga0501075_0096296
370 Ga0501076_0004504
371 Ga0501076_0102403
372 Ga0501077_0090926
373 Ga0501079_0080165
374 Ga0501079_0093433
375 Ga0501079_0158529
376 Ga0501079_0290496
377 Ga0501080_0383156
378 Ga0501081_0266441
379 Ga0501044_0046190
380 Ga0501044_0297122
381 Ga0501045_0098368
382 nmdc:mga03n38_7450_c1
383 nmdc:mga0yw44_11812_c1
384 nmdc:mga0yw44_31926_c2
385 nmdc:mga0k408_64495_c1
386 nmdc:mga06z11_76458_c1
387 nmdc:mga07m45_12528_c1
388 nmdc:mga09592_58080_c1
389 nmdc:mga0qj67_72857_c1
390 nmdc:mga06r32_86668_c1
391 nmdc:mga08y16_21157_c1
392 nmdc:mga08y16_71750_c1
393 nmdc:mga0sz30_2423_c1
394 Ga0495601_0122447
395 Ga0500646_0000184
396 Ga0500583_0035131
397 Ga0500594_0001293
398 Ga0500568_0021685
399 Ga0500604_0000501
400 Ga0500616_0006292
401 Ga0500622_0001099
402 Ga0501084_0328190
403 Ga0501082_0000012
404 Ga0501082_0014967
405 Ga0530510_0085843
406 Ga0530510_0098183
407 Ga0530510_0102404
408 2523107961
409 2550695318
410 2599102318
411 2821445938
412 2844537973
413 2846956982
414 2848861486
415 2906646475
416 2908670556

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

198

309

0.95

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

89

410

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pfo-assembly1.cif.gz_B crystal structure of a putative acetylornithine deacetylase (rpa2325) from rhodopseudomonas palustris cga009 at 1.90 a resolution 0.8708 3 408
7uoi-assembly1.cif.gz_A-2 crystallographic structure of dape from enterococcus faecium 0.8686 17 408
5vo3-assembly1.cif.gz_A-2 crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) 0.8638 13 408
3pfo-assembly1.cif.gz_B crystal structure of a putative acetylornithine deacetylase (rpa2325) from rhodopseudomonas palustris cga009 at 1.90 a resolution 0.8609 3 408
5vo3-assembly1.cif.gz_A-2 crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) 0.8575 13 408
ID Description Score Start End Superfamily
af_P23908_180_301_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8942 198 313 3.30.70.360
af_P65807_191_290_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8691 204 300 3.30.70.360
af_P65807_4_190_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8641 7 184 3.40.630.10
af_Q2FWN8_3_180_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8624 18 184 3.40.630.10
1q7lC00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8488 19 186 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A4Q3P8E8-F1-model_v4 deleted 0.9654 7 199
AF-A0A0G4N2B1-F1-model_v4 Probable succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) 0.9622 1 407 GO:0006508
GO:0008233
GO:0009014
GO:0009089
GO:0046872
AF-A0A433WST9-F1-model_v4 Peptidase M20 0.9617 2 408 GO:0016787
GO:0046872
AF-A0A536UHF9-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9601 7 180 GO:0016787
AF-A0A3B9IMS3-F1-model_v4 Peptidase M20 0.9582 4 167 GO:0016787

Map