F317501

General Info

Members Datasets Scaffolds Average Seq Length
208 136 416 410

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100014961|Ga0070707_1000149614
Length 440
Sequence MRALVCDVSIPRQVVTGLLGRLDKRFFFGPFAPTALRELPDPELPAPDWVTIRTGLCGICGSDYKQMFLNGSMDNPMTAVISFPQVLGHEVVGTIERVGPAVRTRRPGDRVVLNPWLSCAPRGIHPPCPECAEGQYSICRNFARGLLPPGIHTGNSSKATGGFAPLVPAHESMCIPIPDGVSDEQAVLADPFSVSLHGILKRPPAPGATALVYGCGTLGLLAVAILRALYPASRVLAVARFPHQRVLAERFGAAVLAHEPAREIVERVAVETGAQIMTPWYGLPWLHGGGVDVVYDTVGLPATIEVGLRVAAARGAIVVTGVEVPRRFEWTPLYFKEISLIGSNAFGVETFEGHRRHSMEIYLDLVAARRIDVTPILTHRFSLDHWREAFLACGEQGRSGAVKVLFEFRPETMSRGGGERGTSEDPAYVVPRLAKPARQT

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
41 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
42 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
43 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
48 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
49 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
54 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
55 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
56 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
57 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
58 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
59 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
60 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
61 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
62 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
63 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
71 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
79 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
85 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
88 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
89 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
90 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
91 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
94 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
98 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
99 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
109 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.48
Nodule 0
Rhizoplane 4.81
Rhizosphere 93.27
Stem 0
Stem Tuber 0
Unclassified 10.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100014961 3300005468 Bacteria 7281
2 Ga0065715_10096625 3300005293 Bacteria 3793
3 Ga0070680_100083848 3300005336 Bacteria 2632
4 Ga0068868_100084517 3300005338 Bacteria 2549
5 Ga0070709_10022384 3300005434 Bacteria 3695
6 Ga0070708_100038099 3300005445 Bacteria 4198
7 Ga0070662_100083661 3300005457 Unclassified 2382
8 Ga0070681_10104213 3300005458 Bacteria 2779
9 Ga0068867_100037908 3300005459 Bacteria 3506
10 Ga0070706_100009010 3300005467 Bacteria 9289
11 Ga0070706_100119179 3300005467 Bacteria 2460
12 Ga0070706_100206771 3300005467 Bacteria 1833
13 Ga0070707_100070914 3300005468 Bacteria 3357
14 Ga0070707_100347901 3300005468 Bacteria 1440
15 Ga0070698_100013963 3300005471 Bacteria 8494
16 Ga0070698_100018268 3300005471 Bacteria 7383
17 Ga0070699_100019788 3300005518 Bacteria 5802
18 Ga0070699_100126357 3300005518 Bacteria 2252
19 Ga0070699_100174105 3300005518 Bacteria 1907
20 Ga0070696_100017531 3300005546 Unclassified 4834
21 Ga0070696_100083770 3300005546 Bacteria 2262
22 Ga0070664_100090886 3300005564 Bacteria 2642
23 Ga0068856_100243551 3300005614 Bacteria 1813
24 Ga0068862_100254112 3300005844 Bacteria 1603
25 Ga0081455_10060110 3300005937 Bacteria 3205
26 Ga0075428_100000048 3300006844 Bacteria 96714
27 Ga0075428_100000070 3300006844 Bacteria 82370
28 Ga0075428_100136674 3300006844 Bacteria 2665
29 Ga0075431_100010226 3300006847 Bacteria 9434
30 Ga0075431_100012455 3300006847 Bacteria 8585
31 Ga0075431_100122304 3300006847 Bacteria 2685
32 Ga0075431_100299913 3300006847 Bacteria 1623
33 Ga0075433_10027501 3300006852 Unclassified 4825
34 Ga0075433_10177421 3300006852 Unclassified 1896
35 Ga0075433_10180907 3300006852 Bacteria 1876
36 Ga0075434_100002390 3300006871 Bacteria 16476
37 Ga0075434_100005818 3300006871 Bacteria 11259
38 Ga0075434_100082741 3300006871 Unclassified 3207
39 Ga0075434_100161739 3300006871 Bacteria 2259
40 Ga0075436_100002465 3300006914 Bacteria 12738
41 Ga0075436_100010740 3300006914 Bacteria 6281
42 Ga0075435_100113887 3300007076 Unclassified 2251
43 Ga0075435_100186053 3300007076 Bacteria 1756
44 Ga0099794_10060206 3300007265 Bacteria 1844
45 Ga0111539_10018277 3300009094 Bacteria 8684
46 Ga0114129_10002474 3300009147 Bacteria 25654
47 Ga0114129_10015141 3300009147 Bacteria 10977
48 Ga0114129_10136704 3300009147 Bacteria 3363
49 Ga0105248_10247607 3300009177 Unclassified 2006
50 Ga0207684_10032958 3300025910 Bacteria 4406
51 Ga0207684_10046271 3300025910 Bacteria 3691
52 Ga0207684_10138825 3300025910 Bacteria 2089
53 Ga0207707_10024177 3300025912 Bacteria 5315
54 Ga0207646_10014163 3300025922 Bacteria 7584
55 Ga0207664_10191815 3300025929 Bacteria 1759
56 Ga0207679_10053167 3300025945 Bacteria 2974
57 Ga0207677_10062656 3300026023 Bacteria 2581
58 Ga0207703_10451761 3300026035 Bacteria 1200
59 Ga0207702_10380847 3300026078 Bacteria 1357
60 Ga0207683_10363682 3300026121 Bacteria 1329
61 Ga0207428_10048244 3300027907 Bacteria 3417
62 Ga0268265_10186991 3300028380 Bacteria 1785
63 Ga0268264_10082510 3300028381 Bacteria 2751
64 Ga0265332_10000071 3300031238 Bacteria 86362
65 Ga0265320_10014600 3300031240 Bacteria 4464
66 Ga0265325_10066075 3300031241 Unclassified 1825
67 Ga0265331_10000051 3300031250 Bacteria 181262
68 Ga0265331_10055111 3300031250 Bacteria 1892
69 Ga0265327_10054062 3300031251 Bacteria 2080
70 Ga0265316_10000030 3300031344 Bacteria 162620
71 Ga0265314_10000180 3300031711 Bacteria 93446
72 Ga0265314_10000386 3300031711 Bacteria 59716
73 Ga0265342_10023773 3300031712 Bacteria 3873
74 Ga0307413_10004462 3300031824 Bacteria 6095
75 Ga0307410_10001010 3300031852 Bacteria 12189
76 Ga0307409_100003895 3300031995 Bacteria 8254
77 Ga0307414_10006078 3300032004 Bacteria 6698
78 Ga0307411_10001679 3300032005 Bacteria 9268
79 Ga0373926_0007578 3300035083 Bacteria 3615
80 Ga0373934_0048711 3300035086 Unclassified 1678
81 Ga0373945_0033415 3300035116 Bacteria 1828
82 Ga0373956_0001698 3300035119 Bacteria 9084
83 Ga0373955_0004682 3300035172 Bacteria 6075
84 Ga0373931_0014870 3300035691 Bacteria 3812
85 Ga0373931_0179046 3300035691 Bacteria 1254
86 Ga0373935_0042399 3300035692 Bacteria 2861
87 Ga0373927_0039224 3300035695 Bacteria 3073
88 Ga0373927_0064094 3300035695 Bacteria 2377
89 Ga0373933_0002270 3300035724 Bacteria 10957
90 Ga0373947_0087369 3300035725 Bacteria 1939
91 Ga0373937_0004403 3300036401 Bacteria 11972
92 Ga0373937_0024086 3300036401 Bacteria 5489
93 Ga0373925_0069973 3300037068 Bacteria 2651
94 Ga0373925_0200989 3300037068 Bacteria 1585
95 Ga0436365_0529345 3300039437 Bacteria 33749
96 Ga0436365_1460743 3300039437 Bacteria 7444
97 Ga0436360_0065744 3300039438 Unclassified 1866
98 Ga0451577_0113576 3300042876 Bacteria 2424
99 Ga0466961_0031718 3300044693 Bacteria 3398
100 Ga0466963_0024508 3300044694 Bacteria 3842
101 Ga0466963_0106580 3300044694 Unclassified 1922
102 Ga0466963_0175193 3300044694 Bacteria 1496
103 Ga0466964_0049138 3300044706 Bacteria 1726
104 Ga0466957_0021424 3300044842 Bacteria 3808
105 Ga0466959_0105273 3300045049 Bacteria 2017
106 Ga0451576_0126259 3300045051 Bacteria 2665
107 Ga0466958_0002963 3300045836 Bacteria 8695
108 Ga0466958_0032760 3300045836 Unclassified 3093
109 Ga0466967_0027439 3300045976 Bacteria 4737
110 Ga0466967_0032531 3300045976 Bacteria 4405
111 Ga0466967_0070474 3300045976 Bacteria 3128
112 Ga0466967_0271516 3300045976 Bacteria 1625
113 Ga0495651_0041926 3300046462 Bacteria 3555
114 Ga0495653_0102046 3300046463 Bacteria 2077
115 Ga0495580_0009977 3300046472 Bacteria 7426
116 Ga0495587_0019841 3300046536 Bacteria 4156
117 Ga0495667_0064326 3300046559 Bacteria 2399
118 Ga0495657_0003747 3300046675 Bacteria 12305
119 Ga0495623_0006313 3300046679 Bacteria 7707
120 Ga0495658_0019911 3300046683 Bacteria 3510
121 Ga0495600_0095701 3300046809 Bacteria 1936
122 Ga0495674_0108622 3300047319 Bacteria 2354
123 Ga0495680_0031546 3300047322 Bacteria 4310
124 Ga0495675_0056017 3300047444 Bacteria 2500
125 Ga0495602_0007236 3300048088 Bacteria 11621
126 Ga0496100_0019916 3300048903 Bacteria 4013
127 Ga0496103_0022033 3300048906 Bacteria 3835
128 Ga0496106_0096608 3300048909 Bacteria 2287
129 Ga0496108_0100921 3300048911 Bacteria 2461
130 Ga0496109_0096413 3300048912 Bacteria 2740
131 Ga0496110_0011754 3300048913 Bacteria 7184
132 Ga0496110_0120358 3300048913 Bacteria 2365
133 Ga0496113_0089042 3300048916 Bacteria 2375
134 Ga0496114_0178535 3300048917 Unclassified 1853
135 Ga0496115_0006622 3300048918 Bacteria 8495
136 Ga0496126_0000027 3300048929 Bacteria 396518
137 Ga0501032_0046524 3300049569 Bacteria 2933
138 Ga0501032_0201007 3300049569 Bacteria 1300
139 Ga0501034_0000146 3300049571 Bacteria 132818
140 Ga0501034_0003188 3300049571 Bacteria 18862
141 Ga0501034_0041108 3300049571 Bacteria 4678
142 Ga0501034_0116520 3300049571 Bacteria 2660
143 Ga0501036_0072354 3300049572 Bacteria 2914
144 Ga0501037_0031364 3300049573 Bacteria 3924
145 Ga0501038_0048944 3300049574 Bacteria 3656
146 Ga0501040_0010209 3300049576 Bacteria 6140
147 Ga0501041_0011958 3300049577 Bacteria 5138
148 Ga0501046_0005969 3300049580 Bacteria 10840
149 Ga0501048_0009510 3300049582 Bacteria 7295
150 Ga0501067_0004920 3300049583 Bacteria 7426
151 Ga0501068_0000583 3300049584 Bacteria 18501
152 Ga0501068_0023083 3300049584 Bacteria 3644
153 Ga0501068_0107269 3300049584 Bacteria 1734
154 Ga0501069_0001755 3300049585 Bacteria 10818
155 Ga0501069_0009040 3300049585 Bacteria 5257
156 Ga0501070_0000325 3300049586 Bacteria 43267
157 Ga0501070_0007564 3300049586 Bacteria 9231
158 Ga0501070_0042189 3300049586 Bacteria 3800
159 Ga0501071_0033087 3300049587 Bacteria 3673
160 Ga0501072_0005431 3300049588 Bacteria 9704
161 Ga0501072_0011159 3300049588 Bacteria 6858
162 Ga0501073_0001818 3300049589 Bacteria 15876
163 Ga0501073_0025023 3300049589 Bacteria 4284
164 Ga0501074_0001214 3300049590 Bacteria 16965
165 Ga0501074_0004463 3300049590 Bacteria 10013
166 Ga0501075_0003862 3300049591 Bacteria 10092
167 Ga0501076_0016684 3300049592 Bacteria 5570
168 Ga0501076_0029003 3300049592 Bacteria 4301
169 Ga0501077_0004368 3300049593 Bacteria 8577
170 Ga0501079_0039471 3300049741 Bacteria 3641
171 Ga0501080_0000096 3300049742 Bacteria 59454
172 Ga0501080_0001092 3300049742 Bacteria 22354
173 Ga0501080_0016026 3300049742 Bacteria 6917
174 Ga0501080_0123600 3300049742 Bacteria 2397
175 Ga0501083_0001183 3300049744 Bacteria 17620
176 Ga0501083_0018720 3300049744 Bacteria 4822
177 Ga0501083_0020766 3300049744 Bacteria 4566
178 Ga0501044_0000201 3300049823 Bacteria 75685
179 Ga0501045_0006057 3300049824 Bacteria 8376
180 nmdc:mga0yw44_166998_c1 3300050492 Bacteria 1443
181 nmdc:mga05p37_11559_c1 3300050507 Bacteria 10516
182 nmdc:mga05p37_30429_c1 3300050507 Bacteria 6587
183 nmdc:mga05p37_3432_c1 3300050507 Bacteria 18488
184 nmdc:mga0qj67_6387_c1 3300050509 Bacteria 8658
185 nmdc:mga06r32_11885_c1 3300050510 Bacteria 7842
186 nmdc:mga06r32_25315_c1 3300050510 Bacteria 5520
187 nmdc:mga06r32_55827_c1 3300050510 Bacteria 3790
188 nmdc:mga08y16_25954_c1 3300050511 Bacteria 6181
189 nmdc:mga0n895_152092_c1 3300050512 Unclassified 2345
190 nmdc:mga0n895_159943_c1 3300050512 Bacteria 2284
191 nmdc:mga0n895_194725_c1 3300050512 Unclassified 2058
192 nmdc:mga0n895_47997_c1 3300050512 Unclassified 4177
193 nmdc:mga0rr50_211367_c1 3300050513 Unclassified 1598
194 nmdc:mga0rr50_236004_c1 3300050513 Unclassified 1514
195 nmdc:mga0rr50_86733_c1 3300050513 Bacteria 2429
196 nmdc:mga0a205_110410_c1 3300050515 Bacteria 2649
197 nmdc:mga0a205_144057_c1 3300050515 Unclassified 2283
198 nmdc:mga0a205_146976_c1 3300050515 Bacteria 2257
199 nmdc:mga0a205_226188_c1 3300050515 Unclassified 1755
200 nmdc:mga0a205_28821_c1 3300050515 Bacteria 5309
201 Ga0495595_0005805 3300053084 Bacteria 4997
202 Ga0495619_0108193 3300053085 Bacteria 1897
203 Ga0501084_0000675 3300054114 Bacteria 26009
204 Ga0501084_0005517 3300054114 Bacteria 10386
205 Ga0501084_0204562 3300054114 Bacteria 1666
206 Ga0466962_0036784 3300061719 Bacteria 2343
207 Ga0530510_0023985 3300061734 Bacteria 4351
208 Ga0530510_0135961 3300061734 Unclassified 1810
209 Ga0070707_100014961
210 Ga0065715_10096625
211 Ga0070680_100083848
212 Ga0068868_100084517
213 Ga0070709_10022384
214 Ga0070708_100038099
215 Ga0070662_100083661
216 Ga0070681_10104213
217 Ga0068867_100037908
218 Ga0070706_100009010
219 Ga0070706_100119179
220 Ga0070706_100206771
221 Ga0070707_100070914
222 Ga0070707_100347901
223 Ga0070698_100013963
224 Ga0070698_100018268
225 Ga0070699_100019788
226 Ga0070699_100126357
227 Ga0070699_100174105
228 Ga0070696_100017531
229 Ga0070696_100083770
230 Ga0070664_100090886
231 Ga0068856_100243551
232 Ga0068862_100254112
233 Ga0081455_10060110
234 Ga0075428_100000048
235 Ga0075428_100000070
236 Ga0075428_100136674
237 Ga0075431_100010226
238 Ga0075431_100012455
239 Ga0075431_100122304
240 Ga0075431_100299913
241 Ga0075433_10027501
242 Ga0075433_10177421
243 Ga0075433_10180907
244 Ga0075434_100002390
245 Ga0075434_100005818
246 Ga0075434_100082741
247 Ga0075434_100161739
248 Ga0075436_100002465
249 Ga0075436_100010740
250 Ga0075435_100113887
251 Ga0075435_100186053
252 Ga0099794_10060206
253 Ga0111539_10018277
254 Ga0114129_10002474
255 Ga0114129_10015141
256 Ga0114129_10136704
257 Ga0105248_10247607
258 Ga0207684_10032958
259 Ga0207684_10046271
260 Ga0207684_10138825
261 Ga0207707_10024177
262 Ga0207646_10014163
263 Ga0207664_10191815
264 Ga0207679_10053167
265 Ga0207677_10062656
266 Ga0207703_10451761
267 Ga0207702_10380847
268 Ga0207683_10363682
269 Ga0207428_10048244
270 Ga0268265_10186991
271 Ga0268264_10082510
272 Ga0265332_10000071
273 Ga0265320_10014600
274 Ga0265325_10066075
275 Ga0265331_10000051
276 Ga0265331_10055111
277 Ga0265327_10054062
278 Ga0265316_10000030
279 Ga0265314_10000180
280 Ga0265314_10000386
281 Ga0265342_10023773
282 Ga0307413_10004462
283 Ga0307410_10001010
284 Ga0307409_100003895
285 Ga0307414_10006078
286 Ga0307411_10001679
287 Ga0373926_0007578
288 Ga0373934_0048711
289 Ga0373945_0033415
290 Ga0373956_0001698
291 Ga0373955_0004682
292 Ga0373931_0014870
293 Ga0373931_0179046
294 Ga0373935_0042399
295 Ga0373927_0039224
296 Ga0373927_0064094
297 Ga0373933_0002270
298 Ga0373947_0087369
299 Ga0373937_0004403
300 Ga0373937_0024086
301 Ga0373925_0069973
302 Ga0373925_0200989
303 Ga0436365_0529345
304 Ga0436365_1460743
305 Ga0436360_0065744
306 Ga0451577_0113576
307 Ga0466961_0031718
308 Ga0466963_0024508
309 Ga0466963_0106580
310 Ga0466963_0175193
311 Ga0466964_0049138
312 Ga0466957_0021424
313 Ga0466959_0105273
314 Ga0451576_0126259
315 Ga0466958_0002963
316 Ga0466958_0032760
317 Ga0466967_0027439
318 Ga0466967_0032531
319 Ga0466967_0070474
320 Ga0466967_0271516
321 Ga0495651_0041926
322 Ga0495653_0102046
323 Ga0495580_0009977
324 Ga0495587_0019841
325 Ga0495667_0064326
326 Ga0495657_0003747
327 Ga0495623_0006313
328 Ga0495658_0019911
329 Ga0495600_0095701
330 Ga0495674_0108622
331 Ga0495680_0031546
332 Ga0495675_0056017
333 Ga0495602_0007236
334 Ga0496100_0019916
335 Ga0496103_0022033
336 Ga0496106_0096608
337 Ga0496108_0100921
338 Ga0496109_0096413
339 Ga0496110_0011754
340 Ga0496110_0120358
341 Ga0496113_0089042
342 Ga0496114_0178535
343 Ga0496115_0006622
344 Ga0496126_0000027
345 Ga0501032_0046524
346 Ga0501032_0201007
347 Ga0501034_0000146
348 Ga0501034_0003188
349 Ga0501034_0041108
350 Ga0501034_0116520
351 Ga0501036_0072354
352 Ga0501037_0031364
353 Ga0501038_0048944
354 Ga0501040_0010209
355 Ga0501041_0011958
356 Ga0501046_0005969
357 Ga0501048_0009510
358 Ga0501067_0004920
359 Ga0501068_0000583
360 Ga0501068_0023083
361 Ga0501068_0107269
362 Ga0501069_0001755
363 Ga0501069_0009040
364 Ga0501070_0000325
365 Ga0501070_0007564
366 Ga0501070_0042189
367 Ga0501071_0033087
368 Ga0501072_0005431
369 Ga0501072_0011159
370 Ga0501073_0001818
371 Ga0501073_0025023
372 Ga0501074_0001214
373 Ga0501074_0004463
374 Ga0501075_0003862
375 Ga0501076_0016684
376 Ga0501076_0029003
377 Ga0501077_0004368
378 Ga0501079_0039471
379 Ga0501080_0000096
380 Ga0501080_0001092
381 Ga0501080_0016026
382 Ga0501080_0123600
383 Ga0501083_0001183
384 Ga0501083_0018720
385 Ga0501083_0020766
386 Ga0501044_0000201
387 Ga0501045_0006057
388 nmdc:mga0yw44_166998_c1
389 nmdc:mga05p37_11559_c1
390 nmdc:mga05p37_30429_c1
391 nmdc:mga05p37_3432_c1
392 nmdc:mga0qj67_6387_c1
393 nmdc:mga06r32_11885_c1
394 nmdc:mga06r32_25315_c1
395 nmdc:mga06r32_55827_c1
396 nmdc:mga08y16_25954_c1
397 nmdc:mga0n895_152092_c1
398 nmdc:mga0n895_159943_c1
399 nmdc:mga0n895_194725_c1
400 nmdc:mga0n895_47997_c1
401 nmdc:mga0rr50_211367_c1
402 nmdc:mga0rr50_236004_c1
403 nmdc:mga0rr50_86733_c1
404 nmdc:mga0a205_110410_c1
405 nmdc:mga0a205_144057_c1
406 nmdc:mga0a205_146976_c1
407 nmdc:mga0a205_226188_c1
408 nmdc:mga0a205_28821_c1
409 Ga0495595_0005805
410 Ga0495619_0108193
411 Ga0501084_0000675
412 Ga0501084_0005517
413 Ga0501084_0204562
414 Ga0466962_0036784
415 Ga0530510_0023985
416 Ga0530510_0135961

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

217

361

0.92

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

46

179

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lov-assembly1.cif.gz_A crystal structure of putative protoporphyrinogen oxidase (yp_001813199.1) from exiguobacterium sp. 255-15 at 2.06 a resolution 0.9078 207 241
1h2b-assembly1.cif.gz_B crystal structure of the alcohol dehydrogenase from the hyperthermophilic archaeon aeropyrum pernix at 1.65a resolution 0.8776 1 406
1h2b-assembly1.cif.gz_B crystal structure of the alcohol dehydrogenase from the hyperthermophilic archaeon aeropyrum pernix at 1.65a resolution 0.8752 1 406
1e3j-assembly1.cif.gz_A ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly 0.8726 34 408
4ilk-assembly1.cif.gz_A crystal structure of short chain alcohol dehydrogenase (rspb) from e. coli cft073 (efi target efi-506413) complexed with cofactor nadh 0.8719 1 405
ID Description Score Start End Superfamily
af_Q2FV16_5_493_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9344 206 239 3.50.50.60
af_Q10062_1_488_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9192 208 241 3.50.50.60
af_Q4DY51_38_295_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8993 207 240 3.50.50.60
af_P33940_30_518_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8913 207 239 3.50.50.60
1h2bB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8835 193 341 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7K4GNR4-F1-model_v4 Alcohol dehydrogenase catalytic domain-containing protein 0.9716 1 405 GO:0008270
GO:0016616
GO:0030554
GO:0043168
GO:0051262
AF-A0A538FFB4-F1-model_v4 Zinc-binding dehydrogenase 0.9666 51 406 GO:0016491
AF-A0A538FFB4-F1-model_v4 Zinc-binding dehydrogenase 0.9612 51 406 GO:0016491
AF-A0A534Q2H0-F1-model_v4 Alcohol dehydrogenase 0.9595 1 151 GO:0016491
AF-A0A534R7F3-F1-model_v4 Zinc-binding dehydrogenase 0.9551 117 404 GO:0016020
GO:0016491

Map