F317068

General Info

Members Datasets Scaffolds Average Seq Length
207 141 414 418

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_169899_c1|nmdc:mga0n895_169899_c1_120_1616
Length 465
Sequence VTLPRPGRVPIWNPRRCGEFEESTFRHEPKQGRFSVTATIDFQGDSESVLPLARRLAETRRLSLALAEPLSAEDQVVQPMDDASPTKWHLAHTTWFFETFVLKPHLAGFRTLDERFAYCFNSYYEAAGPRQPRPKRGLLTRPSLEDVLRYRRHIDAAIDAIFKTGVVERNRAVAELIELGINHEQQHQELILTDILALFAAQPLRPAYRPASSSPFPRFSRGARWLDFPGGIHRVGHAGESFFYDNERPRHEVLLQDHRLANRLVTNREWLEFMADGGYATPAHWLSDGWAAVNTKGWTAPGYWEGEQGGWRRMTLQGLVPVNLDAPVCHVSYFEADAFARWAGKRLPTEFEWEVAAAALPVRGNMLGSGALRPLPHPASGTSDRPAQMFGDVWEWTQSAYAAYPGFRAGPGALGEYNGKFMCGQYVLRGASCVTPEGHSRATYRNFFYPHQRWQFTGVRLADDA

Samples

Sample ID Description Type Environment
1 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
114 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
118 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.52
Metatranscriptomes 0
Isolates 0.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.38
Nodule 0
Rhizoplane 7.73
Rhizosphere 87.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0n895_169899_c1 3300050512 Bacteria 2212
2 JGI24736J21556_1001132 3300001904 Bacteria 4888
3 JGI24750J21931_1001246 3300002070 Bacteria 3227
4 Ga0070658_10023146 3300005327 Bacteria 4988
5 Ga0070683_100010402 3300005329 Bacteria 8003
6 Ga0070683_100049957 3300005329 Bacteria 3870
7 Ga0070670_100162897 3300005331 Bacteria 1933
8 Ga0070680_100017663 3300005336 Bacteria 5627
9 Ga0070680_100137681 3300005336 Bacteria 2046
10 Ga0070660_100003097 3300005339 Bacteria 11429
11 Ga0070661_100000714 3300005344 Bacteria 24350
12 Ga0070661_100057762 3300005344 Bacteria 2843
13 Ga0070692_10022862 3300005345 Bacteria 3059
14 Ga0070671_100001236 3300005355 Bacteria 19155
15 Ga0070659_100082857 3300005366 Bacteria 2563
16 Ga0070659_100083551 3300005366 Bacteria 2552
17 Ga0070714_100015998 3300005435 Bacteria 6049
18 Ga0070663_100021561 3300005455 Bacteria 4288
19 Ga0070707_100022355 3300005468 Bacteria 5978
20 Ga0070699_100001766 3300005518 Bacteria 19714
21 Ga0070679_100011134 3300005530 Bacteria 8566
22 Ga0070684_100014099 3300005535 Bacteria 6463
23 Ga0070697_100007611 3300005536 Bacteria 8431
24 Ga0068853_100034926 3300005539 Bacteria 4269
25 Ga0070665_100328154 3300005548 Bacteria 1534
26 Ga0068855_100005328 3300005563 Bacteria 15708
27 Ga0068855_100011237 3300005563 Bacteria 10813
28 Ga0070664_100001055 3300005564 Bacteria 21689
29 Ga0070664_100039187 3300005564 Bacteria 3992
30 Ga0068857_100002491 3300005577 Bacteria 15063
31 Ga0068857_100054462 3300005577 Bacteria 3550
32 Ga0068854_100014681 3300005578 Bacteria 5168
33 Ga0068856_100006568 3300005614 Bacteria 11405
34 Ga0068856_100011254 3300005614 Bacteria 8686
35 Ga0068852_100005150 3300005616 Bacteria 9320
36 Ga0068852_100015758 3300005616 Bacteria 5877
37 Ga0068861_100022242 3300005719 Bacteria 4566
38 Ga0068851_10002854 3300005834 Bacteria 7630
39 Ga0068851_10043998 3300005834 Bacteria 2252
40 Ga0081455_10022607 3300005937 Bacteria 5873
41 Ga0081538_10009821 3300005981 Bacteria 7918
42 Ga0075365_10021908 3300006038 Bacteria 3994
43 Ga0075368_10010410 3300006042 Bacteria 3361
44 Ga0075367_10049100 3300006178 Bacteria 2487
45 Ga0075366_10021493 3300006195 Bacteria 3751
46 Ga0068871_100007459 3300006358 Bacteria 7819
47 Ga0075430_100031089 3300006846 Bacteria 4533
48 Ga0075431_100010757 3300006847 Bacteria 9200
49 Ga0075431_100179946 3300006847 Bacteria 2170
50 Ga0075434_100055376 3300006871 Bacteria 3941
51 Ga0075434_100067984 3300006871 Bacteria 3549
52 Ga0075435_100007298 3300007076 Bacteria 7870
53 Ga0075435_100101550 3300007076 Bacteria 2384
54 Ga0105240_10004813 3300009093 Bacteria 20346
55 Ga0105240_10060119 3300009093 Bacteria 4738
56 Ga0105240_10151060 3300009093 Bacteria 2766
57 Ga0111539_10048896 3300009094 Bacteria 5048
58 Ga0111539_10103987 3300009094 Bacteria 3332
59 Ga0105245_10212272 3300009098 Bacteria 1864
60 Ga0105247_10090530 3300009101 Bacteria 1941
61 Ga0114129_10011242 3300009147 Bacteria 12763
62 Ga0114129_10081439 3300009147 Bacteria 4499
63 Ga0105241_10001723 3300009174 Bacteria 16631
64 Ga0105241_10029437 3300009174 Bacteria 4098
65 Ga0105248_10109291 3300009177 Bacteria 3117
66 Ga0105237_10043498 3300009545 Bacteria 4523
67 Ga0105237_10079743 3300009545 Bacteria 3264
68 Ga0105239_10015914 3300010375 Bacteria 8327
69 Ga0157371_10110110 3300013102 Bacteria 1955
70 Ga0157370_10269217 3300013104 Bacteria 1574
71 Ga0157369_10031512 3300013105 Bacteria 5836
72 Ga0157372_10029354 3300013307 Bacteria 6004
73 Ga0157375_10069277 3300013308 Bacteria 3533
74 Ga0157380_10051284 3300014326 Bacteria 3263
75 Ga0207656_10006110 3300025321 Bacteria 4311
76 Ga0207656_10021967 3300025321 Bacteria 2555
77 Ga0207647_10004245 3300025904 Bacteria 10620
78 Ga0207705_10021700 3300025909 Bacteria 4581
79 Ga0207695_10009128 3300025913 Bacteria 12310
80 Ga0207695_10070095 3300025913 Bacteria 3585
81 Ga0207671_10064400 3300025914 Bacteria 2725
82 Ga0207660_10047839 3300025917 Bacteria 3025
83 Ga0207657_10016467 3300025919 Bacteria 7129
84 Ga0207652_10228819 3300025921 Bacteria 1676
85 Ga0207646_10049550 3300025922 Bacteria 3761
86 Ga0207694_10018221 3300025924 Bacteria 5307
87 Ga0207664_10012615 3300025929 Bacteria 6046
88 Ga0207644_10005196 3300025931 Bacteria 8507
89 Ga0207690_10011050 3300025932 Bacteria 5384
90 Ga0207690_10011884 3300025932 Bacteria 5206
91 Ga0207706_10057187 3300025933 Bacteria 3437
92 Ga0207669_10023234 3300025937 Bacteria 3309
93 Ga0207661_10015733 3300025944 Bacteria 5573
94 Ga0207661_10032878 3300025944 Bacteria 4023
95 Ga0207679_10013935 3300025945 Bacteria 5271
96 Ga0207667_10009334 3300025949 Bacteria 11568
97 Ga0207677_10090744 3300026023 Bacteria 2221
98 Ga0207639_10119388 3300026041 Bacteria 2164
99 Ga0207678_10107240 3300026067 Bacteria 2383
100 Ga0207702_10006410 3300026078 Bacteria 10150
101 Ga0207674_10000022 3300026116 Bacteria 161298
102 Ga0207674_10004201 3300026116 Bacteria 17381
103 Ga0207674_10024761 3300026116 Bacteria 6406
104 Ga0207675_100040857 3300026118 Bacteria 4332
105 Ga0207698_10002399 3300026142 Bacteria 11090
106 Ga0207698_10003220 3300026142 Bacteria 9801
107 Ga0207698_10005620 3300026142 Bacteria 7761
108 Ga0209813_10005940 3300027866 Bacteria 2996
109 Ga0207428_10073215 3300027907 Bacteria 2688
110 Ga0307408_100000337 3300031548 Bacteria 44537
111 Ga0307408_100014117 3300031548 Bacteria 5307
112 Ga0307405_10021297 3300031731 Bacteria 3641
113 Ga0307405_10061325 3300031731 Bacteria 2377
114 Ga0307405_10074626 3300031731 Bacteria 2194
115 Ga0307405_10076243 3300031731 Bacteria 2175
116 Ga0307413_10000171 3300031824 Bacteria 18223
117 Ga0307413_10013603 3300031824 Bacteria 4097
118 Ga0307413_10025155 3300031824 Bacteria 3259
119 Ga0307413_10038643 3300031824 Bacteria 2769
120 Ga0307413_10110080 3300031824 Bacteria 1842
121 Ga0307413_10121694 3300031824 Bacteria 1769
122 Ga0307410_10001729 3300031852 Bacteria 10087
123 Ga0307410_10107417 3300031852 Bacteria 2013
124 Ga0307406_10004849 3300031901 Bacteria 7327
125 Ga0307406_10005320 3300031901 Bacteria 7042
126 Ga0307406_10060963 3300031901 Bacteria 2434
127 Ga0307407_10014709 3300031903 Bacteria 3841
128 Ga0307412_10039475 3300031911 Bacteria 3048
129 Ga0307409_100051239 3300031995 Bacteria 3158
130 Ga0307409_100057265 3300031995 Bacteria 3019
131 Ga0307416_100128720 3300032002 Bacteria 2273
132 Ga0307414_10004674 3300032004 Bacteria 7463
133 Ga0307414_10024487 3300032004 Bacteria 3850
134 Ga0307414_10086696 3300032004 Bacteria 2311
135 Ga0307414_10106207 3300032004 Bacteria 2125
136 Ga0307414_10138376 3300032004 Bacteria 1902
137 Ga0307414_10173758 3300032004 Bacteria 1725
138 Ga0307414_10176586 3300032004 Bacteria 1713
139 Ga0307414_10204752 3300032004 Bacteria 1608
140 Ga0307411_10001411 3300032005 Bacteria 9772
141 Ga0307411_10011691 3300032005 Bacteria 4752
142 Ga0307411_10018803 3300032005 Bacteria 3974
143 Ga0307411_10027910 3300032005 Bacteria 3423
144 Ga0307411_10041933 3300032005 Bacteria 2916
145 Ga0307411_10081932 3300032005 Bacteria 2223
146 Ga0373955_0033537 3300035172 Bacteria 2705
147 Ga0373937_0019322 3300036401 Bacteria 6097
148 Ga0395899_0033477 3300037312 Bacteria 3859
149 Ga0395900_0018455 3300037418 Bacteria 7114
150 Ga0395898_0044993 3300037466 Bacteria 4340
151 Ga0395905_0053147 3300037471 Bacteria 3792
152 Ga0395901_0015514 3300038443 Bacteria 7759
153 Ga0395901_0058441 3300038443 Bacteria 4011
154 Ga0436361_0977392 3300039447 Bacteria 8911
155 Ga0451577_0010279 3300042876 Bacteria 8957
156 Ga0466969_0064140 3300044656 Bacteria 1779
157 Ga0466977_0000385 3300044666 Bacteria 13754
158 Ga0466965_0015612 3300044683 Bacteria 3608
159 Ga0466966_0022621 3300044684 Bacteria 4124
160 Ga0466966_0071512 3300044684 Bacteria 2173
161 Ga0466961_0006423 3300044693 Bacteria 7464
162 Ga0466963_0001244 3300044694 Bacteria 13468
163 Ga0466970_0002914 3300044765 Bacteria 8290
164 Ga0466959_0043317 3300045049 Bacteria 3317
165 Ga0466967_0003377 3300045976 Bacteria 10396
166 Ga0495638_0003917 3300046460 Bacteria 11507
167 Ga0495663_0018288 3300046525 Bacteria 1995
168 Ga0495621_0003047 3300046539 Bacteria 4572
169 Ga0495625_0001385 3300046660 Bacteria 29774
170 Ga0495669_0075755 3300046684 Bacteria 1539
171 Ga0495670_0011308 3300046691 Bacteria 4388
172 Ga0495677_0004306 3300047445 Bacteria 5470
173 Ga0496101_0003378 3300048904 Bacteria 9953
174 Ga0496104_0025510 3300048907 Bacteria 5449
175 Ga0496104_0129076 3300048907 Bacteria 2428
176 Ga0496105_0038015 3300048908 Bacteria 3965
177 Ga0496105_0060217 3300048908 Bacteria 3133
178 Ga0496106_0219753 3300048909 Bacteria 1515
179 Ga0496109_0206934 3300048912 Bacteria 1845
180 Ga0496111_0086136 3300048914 Bacteria 2298
181 Ga0496112_0010404 3300048915 Bacteria 8435
182 Ga0496112_0157856 3300048915 Bacteria 2235
183 Ga0496112_0221027 3300048915 Bacteria 1850
184 Ga0496112_0336449 3300048915 Bacteria 1453
185 Ga0496113_0016504 3300048916 Bacteria 5103
186 Ga0496113_0047667 3300048916 Bacteria 3185
187 Ga0496115_0004755 3300048918 Bacteria 9854
188 Ga0496115_0076891 3300048918 Bacteria 2713
189 Ga0496118_0088574 3300048921 Bacteria 2140
190 Ga0501036_0015107 3300049572 Bacteria 6446
191 Ga0501043_0045378 3300049579 Bacteria 3457
192 Ga0501048_0113306 3300049582 Bacteria 1916
193 Ga0501071_0006142 3300049587 Bacteria 7784
194 Ga0501071_0110690 3300049587 Bacteria 2030
195 Ga0501076_0067948 3300049592 Bacteria 2846
196 Ga0501077_0054593 3300049593 Bacteria 2537
197 Ga0501077_0159481 3300049593 Bacteria 1432
198 nmdc:mga0yw44_98656_c1 3300050492 Bacteria 1858
199 nmdc:mga06z11_8635_c1 3300050494 Bacteria 4261
200 nmdc:mga0qj67_198988_c1 3300050509 Bacteria 1628
201 nmdc:mga0qj67_61053_c1 3300050509 Bacteria 2992
202 nmdc:mga08y16_38683_c1 3300050511 Bacteria 5007
203 nmdc:mga0n895_165985_c1 3300050512 Bacteria 2239
204 Ga0501084_0062543 3300054114 Bacteria 3116
205 Ga0501084_0103173 3300054114 Bacteria 2395
206 Ga0530510_0022742 3300061734 Bacteria 4466
207 2837679234 2837678835 Bacteria 5252418
208 nmdc:mga0n895_169899_c1
209 JGI24736J21556_1001132
210 JGI24750J21931_1001246
211 Ga0070658_10023146
212 Ga0070683_100010402
213 Ga0070683_100049957
214 Ga0070670_100162897
215 Ga0070680_100017663
216 Ga0070680_100137681
217 Ga0070660_100003097
218 Ga0070661_100000714
219 Ga0070661_100057762
220 Ga0070692_10022862
221 Ga0070671_100001236
222 Ga0070659_100082857
223 Ga0070659_100083551
224 Ga0070714_100015998
225 Ga0070663_100021561
226 Ga0070707_100022355
227 Ga0070699_100001766
228 Ga0070679_100011134
229 Ga0070684_100014099
230 Ga0070697_100007611
231 Ga0068853_100034926
232 Ga0070665_100328154
233 Ga0068855_100005328
234 Ga0068855_100011237
235 Ga0070664_100001055
236 Ga0070664_100039187
237 Ga0068857_100002491
238 Ga0068857_100054462
239 Ga0068854_100014681
240 Ga0068856_100006568
241 Ga0068856_100011254
242 Ga0068852_100005150
243 Ga0068852_100015758
244 Ga0068861_100022242
245 Ga0068851_10002854
246 Ga0068851_10043998
247 Ga0081455_10022607
248 Ga0081538_10009821
249 Ga0075365_10021908
250 Ga0075368_10010410
251 Ga0075367_10049100
252 Ga0075366_10021493
253 Ga0068871_100007459
254 Ga0075430_100031089
255 Ga0075431_100010757
256 Ga0075431_100179946
257 Ga0075434_100055376
258 Ga0075434_100067984
259 Ga0075435_100007298
260 Ga0075435_100101550
261 Ga0105240_10004813
262 Ga0105240_10060119
263 Ga0105240_10151060
264 Ga0111539_10048896
265 Ga0111539_10103987
266 Ga0105245_10212272
267 Ga0105247_10090530
268 Ga0114129_10011242
269 Ga0114129_10081439
270 Ga0105241_10001723
271 Ga0105241_10029437
272 Ga0105248_10109291
273 Ga0105237_10043498
274 Ga0105237_10079743
275 Ga0105239_10015914
276 Ga0157371_10110110
277 Ga0157370_10269217
278 Ga0157369_10031512
279 Ga0157372_10029354
280 Ga0157375_10069277
281 Ga0157380_10051284
282 Ga0207656_10006110
283 Ga0207656_10021967
284 Ga0207647_10004245
285 Ga0207705_10021700
286 Ga0207695_10009128
287 Ga0207695_10070095
288 Ga0207671_10064400
289 Ga0207660_10047839
290 Ga0207657_10016467
291 Ga0207652_10228819
292 Ga0207646_10049550
293 Ga0207694_10018221
294 Ga0207664_10012615
295 Ga0207644_10005196
296 Ga0207690_10011050
297 Ga0207690_10011884
298 Ga0207706_10057187
299 Ga0207669_10023234
300 Ga0207661_10015733
301 Ga0207661_10032878
302 Ga0207679_10013935
303 Ga0207667_10009334
304 Ga0207677_10090744
305 Ga0207639_10119388
306 Ga0207678_10107240
307 Ga0207702_10006410
308 Ga0207674_10000022
309 Ga0207674_10004201
310 Ga0207674_10024761
311 Ga0207675_100040857
312 Ga0207698_10002399
313 Ga0207698_10003220
314 Ga0207698_10005620
315 Ga0209813_10005940
316 Ga0207428_10073215
317 Ga0307408_100000337
318 Ga0307408_100014117
319 Ga0307405_10021297
320 Ga0307405_10061325
321 Ga0307405_10074626
322 Ga0307405_10076243
323 Ga0307413_10000171
324 Ga0307413_10013603
325 Ga0307413_10025155
326 Ga0307413_10038643
327 Ga0307413_10110080
328 Ga0307413_10121694
329 Ga0307410_10001729
330 Ga0307410_10107417
331 Ga0307406_10004849
332 Ga0307406_10005320
333 Ga0307406_10060963
334 Ga0307407_10014709
335 Ga0307412_10039475
336 Ga0307409_100051239
337 Ga0307409_100057265
338 Ga0307416_100128720
339 Ga0307414_10004674
340 Ga0307414_10024487
341 Ga0307414_10086696
342 Ga0307414_10106207
343 Ga0307414_10138376
344 Ga0307414_10173758
345 Ga0307414_10176586
346 Ga0307414_10204752
347 Ga0307411_10001411
348 Ga0307411_10011691
349 Ga0307411_10018803
350 Ga0307411_10027910
351 Ga0307411_10041933
352 Ga0307411_10081932
353 Ga0373955_0033537
354 Ga0373937_0019322
355 Ga0395899_0033477
356 Ga0395900_0018455
357 Ga0395898_0044993
358 Ga0395905_0053147
359 Ga0395901_0015514
360 Ga0395901_0058441
361 Ga0436361_0977392
362 Ga0451577_0010279
363 Ga0466969_0064140
364 Ga0466977_0000385
365 Ga0466965_0015612
366 Ga0466966_0022621
367 Ga0466966_0071512
368 Ga0466961_0006423
369 Ga0466963_0001244
370 Ga0466970_0002914
371 Ga0466959_0043317
372 Ga0466967_0003377
373 Ga0495638_0003917
374 Ga0495663_0018288
375 Ga0495621_0003047
376 Ga0495625_0001385
377 Ga0495669_0075755
378 Ga0495670_0011308
379 Ga0495677_0004306
380 Ga0496101_0003378
381 Ga0496104_0025510
382 Ga0496104_0129076
383 Ga0496105_0038015
384 Ga0496105_0060217
385 Ga0496106_0219753
386 Ga0496109_0206934
387 Ga0496111_0086136
388 Ga0496112_0010404
389 Ga0496112_0157856
390 Ga0496112_0221027
391 Ga0496112_0336449
392 Ga0496113_0016504
393 Ga0496113_0047667
394 Ga0496115_0004755
395 Ga0496115_0076891
396 Ga0496118_0088574
397 Ga0501036_0015107
398 Ga0501043_0045378
399 Ga0501048_0113306
400 Ga0501071_0006142
401 Ga0501071_0110690
402 Ga0501076_0067948
403 Ga0501077_0054593
404 Ga0501077_0159481
405 nmdc:mga0yw44_98656_c1
406 nmdc:mga06z11_8635_c1
407 nmdc:mga0qj67_198988_c1
408 nmdc:mga0qj67_61053_c1
409 nmdc:mga08y16_38683_c1
410 nmdc:mga0n895_165985_c1
411 Ga0501084_0062543
412 Ga0501084_0103173
413 Ga0530510_0022742
414 2837679234

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12867

DinB_2

DinB superfamily

55

191

0.91

PF03781

FGE-sulfatase

Sulfatase-modifying factor enzyme 1

221

374

0.87

PF03781

FGE-sulfatase

Sulfatase-modifying factor enzyme 1

386

463

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6o6m-assembly1.cif.gz_C the structure of egtb (cabther) 0.8679 12 397
6o6m-assembly1.cif.gz_B the structure of egtb (cabther) 0.8668 12 397
6o6l-assembly1.cif.gz_D the structure of egtb(cabther) in complex with hercynine 0.8591 12 397
6o6l-assembly1.cif.gz_C the structure of egtb(cabther) in complex with hercynine 0.856 12 397
6qkj-assembly1.cif.gz_A egtb from chloracidobacterium thermophilum, a type ii sulfoxide synthase in complex with n,n,n-trimethyl-histidine 0.8553 12 397
ID Description Score Start End Superfamily
af_Q8BHC0_41_132_3.10.100.10 Alpha Beta;Roll;Mannose-Binding Protein A; Chain A;Mannose-Binding Protein A, subunit A 0.815 270 300 3.10.100.10
af_O69671_154_424_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.7531 172 396 3.90.1580.10
af_O53728_4_171_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7123 12 150 1.20.120.450
af_A4I4F2_49_196_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7093 19 146 1.20.120.450
3cexB00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7062 9 150 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A2R7T5V8-F1-model_v4 Ergothioneine biosynthesis protein EgtB 1.002 15 120
AF-A0A7K2BPB4-F1-model_v4 deleted 0.9961 12 121
AF-A0A2A2KEI6-F1-model_v4 DinB-like domain-containing protein 0.994 10 125
AF-A0A836ZQV9-F1-model_v4 Ergothioneine biosynthesis protein EgtB 0.9916 29 115
AF-A0A522W9G2-F1-model_v4 Uncharacterized protein 0.9904 14 100

Map