F316841

General Info

Members Datasets Scaffolds Average Seq Length
207 137 414 433

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0000396|Ga0451576_0000396_83410_84888
Length 492
Sequence LLVRGRACRAGDAADVSAPGIQGNPRRETTGGRPGRTIGSRGAGLLCKAHGFGFVTDDMANPSPATLRFQNKEYSLPVIVGSEGEHGLDISKLRNESGAITYDEGFGNTGSCTSAITFIDGEVGILRYRGYPIEQLAEKSSFVETAYLVIYGELPTSEQRRNFGRLLTQAAPLREGMLRFIQNFPRDSHPMAVLSATMNALGAYYPHLASNNHQRDLEHFDEAATIAISKVRTIAAHTYRVSNGQPFNYPRPNIGYCENFLHLMFSEPYNEYIPTAEVASALNLFLLLHADHEQNCSTSTVRMVASAGANLFASISAGVNALWGPLHGGANMAVIQMLQSIHDEGDDGTKFLAAAKLGKGERLMGFGHRVYKNYDPRAKIIKESFEKALASLNIKGDPLLDIARKLEEAALNDDYFVSRKLYPNVDFYSGLIMRAIGIPLNMYTVMFAIGRMPGWIAQWREVAQNSKLKIYRPRQIYVGPTPRDYVPMEQRK

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
20 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
34 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
35 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
36 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
37 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
41 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
44 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
57 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
58 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
59 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
77 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
78 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
86 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
87 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
90 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
91 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
106 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
107 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
113 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
114 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
115 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
116 2643221613 Oerskovia sp. Root22 Isolate Unclassified
117 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
118 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
119 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
120 2643221721 Oerskovia sp. Root918 Isolate Unclassified
121 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
122 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
123 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
124 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
125 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
126 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
127 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
128 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
129 2808606394 Promicromonospora sp. C35 Isolate Unclassified
130 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
131 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
132 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
133 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
134 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
135 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
136 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
137 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.44
Metatranscriptomes 1.45
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.48
Nodule 0.48
Rhizoplane 2.42
Rhizosphere 84.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0000396 3300045051 Bacteria 101504
2 Ga0007423J48922_100153 3300003285 Bacteria 8190
3 rootH1_10036710 3300003323 Bacteria 12859
4 Ga0070690_100000664 3300005330 Bacteria 17506
5 Ga0068869_100000006 3300005334 Bacteria 87287
6 Ga0068868_100003928 3300005338 Bacteria 10386
7 Ga0068868_100027248 3300005338 Bacteria 4360
8 Ga0070689_100000848 3300005340 Bacteria 18997
9 Ga0068867_100001137 3300005459 Bacteria 18183
10 Ga0068867_100116649 3300005459 Bacteria 2058
11 Ga0068857_100001813 3300005577 Bacteria 17181
12 Ga0068856_100000954 3300005614 Bacteria 30954
13 Ga0068856_100002314 3300005614 Bacteria 19612
14 Ga0068863_100023232 3300005841 Bacteria 5925
15 Ga0068858_100085460 3300005842 Bacteria 2935
16 Ga0070717_10000003 3300006028 Bacteria 370103
17 Ga0097621_100010443 3300006237 Bacteria 6800
18 Ga0097621_100041596 3300006237 Bacteria 3700
19 Ga0068871_100018126 3300006358 Bacteria 5345
20 Ga0068865_100000462 3300006881 Bacteria 22708
21 Ga0097620_100396447 3300006931 Bacteria 1476
22 Ga0105242_10012091 3300009176 Bacteria 6641
23 Ga0105249_10118719 3300009553 Bacteria 2511
24 Ga0157372_10340795 3300013307 Bacteria 1746
25 Ga0163163_10278910 3300014325 Bacteria 1723
26 Ga0207686_10044461 3300025934 Bacteria 2727
27 Ga0207670_10001296 3300025936 Bacteria 13191
28 Ga0207704_10001263 3300025938 Bacteria 11307
29 Ga0207689_10000034 3300025942 Bacteria 95262
30 Ga0207661_10020938 3300025944 Bacteria 4897
31 Ga0207712_10068937 3300025961 Bacteria 2536
32 Ga0207677_10009345 3300026023 Bacteria 5516
33 Ga0207702_10000449 3300026078 Bacteria 46527
34 Ga0207702_10003073 3300026078 Bacteria 15502
35 Ga0207648_10004658 3300026089 Bacteria 14035
36 Ga0207648_10037087 3300026089 Bacteria 4294
37 Ga0207674_10072983 3300026116 Bacteria 3446
38 Ga0207674_10189146 3300026116 Bacteria 2008
39 Ga0207683_10057111 3300026121 Bacteria 3426
40 Ga0265337_1000534 3300028556 Bacteria 20228
41 Ga0265337_1000677 3300028556 Bacteria 18019
42 Ga0265337_1001499 3300028556 Bacteria 11457
43 Ga0265337_1013898 3300028556 Bacteria 2684
44 Ga0265337_1017304 3300028556 Bacteria 2313
45 Ga0265319_1000004 3300028563 Bacteria 305085
46 Ga0265319_1003636 3300028563 Bacteria 7971
47 Ga0265334_10020444 3300028573 Bacteria 2710
48 Ga0265323_10000005 3300028653 Bacteria 196003
49 Ga0265323_10003371 3300028653 Bacteria 7074
50 Ga0265323_10003908 3300028653 Bacteria 6480
51 Ga0265323_10004877 3300028653 Bacteria 5735
52 Ga0265323_10005248 3300028653 Bacteria 5507
53 Ga0265323_10008473 3300028653 Bacteria 4239
54 Ga0265323_10021537 3300028653 Bacteria 2469
55 Ga0265323_10028606 3300028653 Bacteria 2089
56 Ga0265336_10000950 3300028666 Bacteria 14550
57 Ga0265336_10011465 3300028666 Bacteria 3012
58 Ga0265338_10000274 3300028800 Bacteria 93897
59 Ga0265338_10000459 3300028800 Bacteria 72730
60 Ga0265338_10000843 3300028800 Bacteria 51673
61 Ga0265338_10002125 3300028800 Bacteria 30449
62 Ga0265338_10002612 3300028800 Bacteria 26603
63 Ga0265338_10004765 3300028800 Bacteria 18132
64 Ga0265338_10007287 3300028800 Bacteria 13802
65 Ga0265338_10007609 3300028800 Bacteria 13376
66 Ga0265338_10020255 3300028800 Bacteria 7008
67 Ga0265338_10027947 3300028800 Bacteria 5643
68 Ga0265338_10083976 3300028800 Bacteria 2661
69 Ga0265324_10030499 3300029957 Bacteria 1891
70 Ga0316181_1234409 3300030744 Bacteria 2086
71 Ga0265330_10003828 3300031235 Bacteria 7749
72 Ga0265330_10025506 3300031235 Bacteria 2679
73 Ga0265330_10071095 3300031235 Bacteria 1506
74 Ga0265320_10001005 3300031240 Bacteria 20964
75 Ga0265320_10020305 3300031240 Bacteria 3604
76 Ga0265320_10022973 3300031240 Bacteria 3328
77 Ga0265339_10003157 3300031249 Bacteria 11596
78 Ga0265316_10001559 3300031344 Bacteria 24560
79 Ga0265316_10008385 3300031344 Bacteria 9599
80 Ga0265316_10010884 3300031344 Bacteria 8259
81 Ga0265316_10013762 3300031344 Bacteria 7167
82 Ga0307408_100000009 3300031548 Bacteria 426576
83 Ga0265313_10002951 3300031595 Bacteria 14195
84 Ga0265313_10003264 3300031595 Bacteria 13320
85 Ga0265313_10007405 3300031595 Bacteria 7517
86 Ga0316575_10000188 3300031665 Bacteria 16260
87 Ga0265314_10002166 3300031711 Bacteria 20548
88 Ga0265314_10005041 3300031711 Bacteria 12036
89 Ga0265342_10002267 3300031712 Bacteria 16808
90 Ga0265342_10042928 3300031712 Bacteria 2730
91 Ga0316576_10005999 3300031727 Bacteria 7506
92 Ga0316576_10021114 3300031727 Bacteria 4497
93 Ga0316576_10090618 3300031727 Bacteria 2278
94 Ga0316578_10054788 3300031728 Bacteria 2339
95 Ga0307410_10000159 3300031852 Bacteria 24412
96 Ga0307407_10012917 3300031903 Bacteria 4034
97 Ga0307407_10035465 3300031903 Bacteria 2740
98 Ga0307409_100000062 3300031995 Bacteria 39648
99 Ga0307416_100000018 3300032002 Bacteria 200227
100 Ga0316583_10004220 3300032133 Bacteria 5116
101 Ga0316580_10009089 3300032139 Bacteria 2986
102 Ga0373951_0002710 3300035091 Bacteria 4434
103 Ga0373954_0003950 3300035118 Bacteria 6343
104 Ga0316574_0021263 3300035398 Bacteria 3851
105 Ga0373931_0127744 3300035691 Bacteria 1460
106 Ga0373937_0001257 3300036401 Bacteria 21283
107 Ga0316582_0009626 3300036647 Bacteria 5253
108 Ga0395899_0000067 3300037312 Bacteria 202348
109 Ga0395898_0000067 3300037466 Bacteria 255955
110 Ga0395905_0000064 3300037471 Bacteria 186494
111 Ga0451791_1313723 3300041451 Bacteria 2566
112 Ga0451577_0014618 3300042876 Bacteria 7313
113 Ga0451577_0015351 3300042876 Bacteria 7127
114 Ga0451577_0188084 3300042876 Bacteria 1862
115 Ga0453683_0002405 3300044673 Bacteria 14587
116 Ga0466961_0014809 3300044693 Bacteria 5011
117 Ga0466963_0079782 3300044694 Bacteria 2215
118 Ga0453684_0000001 3300044712 Bacteria 2623166
119 Ga0453684_0000115 3300044712 Bacteria 355501
120 Ga0453684_0005140 3300044712 Bacteria 26322
121 Ga0453684_0015312 3300044712 Bacteria 12155
122 Ga0466957_0032532 3300044842 Bacteria 3123
123 Ga0451576_0000255 3300045051 Bacteria 131310
124 Ga0451576_0003570 3300045051 Bacteria 21168
125 Ga0451576_0035632 3300045051 Bacteria 5278
126 Ga0451576_0130985 3300045051 Bacteria 2614
127 Ga0451576_0156194 3300045051 Bacteria 2380
128 Ga0466967_0107797 3300045976 Bacteria 2555
129 Ga0495630_0120882 3300046517 Bacteria 1987
130 Ga0495586_0023551 3300046535 Bacteria 3289
131 Ga0495635_0059004 3300046663 Bacteria 2639
132 Ga0495588_0015340 3300046674 Bacteria 3686
133 Ga0495613_0052651 3300046689 Bacteria 2996
134 Ga0495684_0088515 3300047471 Bacteria 2347
135 Ga0496104_0059048 3300048907 Bacteria 3631
136 Ga0496105_0083618 3300048908 Bacteria 2636
137 Ga0496110_0123130 3300048913 Bacteria 2338
138 Ga0496115_0196593 3300048918 Bacteria 1666
139 Ga0496119_0106523 3300048922 Bacteria 1564
140 Ga0496122_0000832 3300048925 Bacteria 58580
141 Ga0496122_0001262 3300048925 Bacteria 42353
142 Ga0496123_0021672 3300048926 Bacteria 4984
143 Ga0496124_0000370 3300048927 Bacteria 82276
144 Ga0496125_0000015 3300048928 Bacteria 516648
145 Ga0496125_0007566 3300048928 Bacteria 11534
146 Ga0496126_0017809 3300048929 Bacteria 7070
147 Ga0501305_006544 3300049161 Bacteria 1449
148 Ga0501323_004815 3300049539 Bacteria 1447
149 Ga0501031_0064906 3300049568 Bacteria 2378
150 Ga0501031_0075817 3300049568 Bacteria 2190
151 Ga0501032_0001667 3300049569 Bacteria 17644
152 Ga0501032_0004288 3300049569 Bacteria 10767
153 Ga0501033_0016624 3300049570 Bacteria 5565
154 Ga0501034_0019940 3300049571 Bacteria 6847
155 Ga0501034_0022554 3300049571 Bacteria 6415
156 Ga0501034_0026929 3300049571 Bacteria 5850
157 Ga0501034_0030634 3300049571 Bacteria 5468
158 Ga0501034_0041350 3300049571 Bacteria 4663
159 Ga0501034_0076638 3300049571 Bacteria 3350
160 Ga0501036_0062451 3300049572 Bacteria 3155
161 Ga0501037_0038992 3300049573 Bacteria 3499
162 Ga0501038_0007433 3300049574 Bacteria 10110
163 Ga0501038_0071373 3300049574 Bacteria 2945
164 Ga0501039_0022297 3300049575 Bacteria 4861
165 Ga0501039_0044729 3300049575 Bacteria 3420
166 Ga0501042_0026380 3300049578 Bacteria 4082
167 Ga0501043_0021575 3300049579 Bacteria 5050
168 Ga0501046_0004091 3300049580 Bacteria 13295
169 Ga0501046_0150678 3300049580 Bacteria 1754
170 Ga0501047_0009853 3300049581 Bacteria 9029
171 Ga0501047_0010204 3300049581 Bacteria 8884
172 Ga0501047_0157591 3300049581 Bacteria 2143
173 Ga0501067_0060221 3300049583 Bacteria 2101
174 Ga0501074_0114442 3300049590 Bacteria 1930
175 Ga0501243_000166 3300049675 Bacteria 7695
176 Ga0501083_0037537 3300049744 Bacteria 3299
177 Ga0501035_0028785 3300049822 Bacteria 5069
178 Ga0501044_0005490 3300049823 Bacteria 14085
179 Ga0501044_0009395 3300049823 Bacteria 10653
180 nmdc:mga0rr50_57306_c1 3300050513 Bacteria 2914
181 Ga0495619_0045276 3300053085 Bacteria 2891
182 Ga0500643_003051 3300053087 Bacteria 8261
183 Ga0501082_0023906 3300060353 Bacteria 5269
184 Ga0501082_0047548 3300060353 Bacteria 3697
185 2644016578 2643221601 Bacteria 7493239
186 2644082787 2643221613 Bacteria 4622396
187 2644175025 2643221631 Bacteria 8168043
188 2644505116 2643221690 Bacteria 4654705
189 2644527439 2643221694 Bacteria 4392972
190 2644665742 2643221721 Bacteria 4486924
191 2644667493 2643221722 Bacteria 4247614
192 2738697424 2738541272 Bacteria 6848551
193 2739328020 2738543027 Bacteria 6409078
194 2739609709 2739367654 Bacteria 6049412
195 2760306369 2758568522 Bacteria 5953541
196 2760625172 2758568621 Bacteria 5967089
197 2776374390 2775506925 Bacteria 7237746
198 2788433972 2786546940 Bacteria 6396474
199 2809030035 2808606394 Bacteria 6248540
200 2812362282 2811994880 Bacteria 4147780
201 2835190013 2835188231 Bacteria 3476928
202 2839987518 2839986021 Bacteria 3685650
203 2884994430 2884994152 Bacteria 4492978
204 2932433852 2932431166 Bacteria 4215299
205 2935892543 2935890801 Bacteria 4593001
206 8055417861 8055412473 Bacteria 6257500
207 8056580584 8056579771 Bacteria 5840325
208 Ga0451576_0000396
209 Ga0007423J48922_100153
210 rootH1_10036710
211 Ga0070690_100000664
212 Ga0068869_100000006
213 Ga0068868_100003928
214 Ga0068868_100027248
215 Ga0070689_100000848
216 Ga0068867_100001137
217 Ga0068867_100116649
218 Ga0068857_100001813
219 Ga0068856_100000954
220 Ga0068856_100002314
221 Ga0068863_100023232
222 Ga0068858_100085460
223 Ga0070717_10000003
224 Ga0097621_100010443
225 Ga0097621_100041596
226 Ga0068871_100018126
227 Ga0068865_100000462
228 Ga0097620_100396447
229 Ga0105242_10012091
230 Ga0105249_10118719
231 Ga0157372_10340795
232 Ga0163163_10278910
233 Ga0207686_10044461
234 Ga0207670_10001296
235 Ga0207704_10001263
236 Ga0207689_10000034
237 Ga0207661_10020938
238 Ga0207712_10068937
239 Ga0207677_10009345
240 Ga0207702_10000449
241 Ga0207702_10003073
242 Ga0207648_10004658
243 Ga0207648_10037087
244 Ga0207674_10072983
245 Ga0207674_10189146
246 Ga0207683_10057111
247 Ga0265337_1000534
248 Ga0265337_1000677
249 Ga0265337_1001499
250 Ga0265337_1013898
251 Ga0265337_1017304
252 Ga0265319_1000004
253 Ga0265319_1003636
254 Ga0265334_10020444
255 Ga0265323_10000005
256 Ga0265323_10003371
257 Ga0265323_10003908
258 Ga0265323_10004877
259 Ga0265323_10005248
260 Ga0265323_10008473
261 Ga0265323_10021537
262 Ga0265323_10028606
263 Ga0265336_10000950
264 Ga0265336_10011465
265 Ga0265338_10000274
266 Ga0265338_10000459
267 Ga0265338_10000843
268 Ga0265338_10002125
269 Ga0265338_10002612
270 Ga0265338_10004765
271 Ga0265338_10007287
272 Ga0265338_10007609
273 Ga0265338_10020255
274 Ga0265338_10027947
275 Ga0265338_10083976
276 Ga0265324_10030499
277 Ga0316181_1234409
278 Ga0265330_10003828
279 Ga0265330_10025506
280 Ga0265330_10071095
281 Ga0265320_10001005
282 Ga0265320_10020305
283 Ga0265320_10022973
284 Ga0265339_10003157
285 Ga0265316_10001559
286 Ga0265316_10008385
287 Ga0265316_10010884
288 Ga0265316_10013762
289 Ga0307408_100000009
290 Ga0265313_10002951
291 Ga0265313_10003264
292 Ga0265313_10007405
293 Ga0316575_10000188
294 Ga0265314_10002166
295 Ga0265314_10005041
296 Ga0265342_10002267
297 Ga0265342_10042928
298 Ga0316576_10005999
299 Ga0316576_10021114
300 Ga0316576_10090618
301 Ga0316578_10054788
302 Ga0307410_10000159
303 Ga0307407_10012917
304 Ga0307407_10035465
305 Ga0307409_100000062
306 Ga0307416_100000018
307 Ga0316583_10004220
308 Ga0316580_10009089
309 Ga0373951_0002710
310 Ga0373954_0003950
311 Ga0316574_0021263
312 Ga0373931_0127744
313 Ga0373937_0001257
314 Ga0316582_0009626
315 Ga0395899_0000067
316 Ga0395898_0000067
317 Ga0395905_0000064
318 Ga0451791_1313723
319 Ga0451577_0014618
320 Ga0451577_0015351
321 Ga0451577_0188084
322 Ga0453683_0002405
323 Ga0466961_0014809
324 Ga0466963_0079782
325 Ga0453684_0000001
326 Ga0453684_0000115
327 Ga0453684_0005140
328 Ga0453684_0015312
329 Ga0466957_0032532
330 Ga0451576_0000255
331 Ga0451576_0003570
332 Ga0451576_0035632
333 Ga0451576_0130985
334 Ga0451576_0156194
335 Ga0466967_0107797
336 Ga0495630_0120882
337 Ga0495586_0023551
338 Ga0495635_0059004
339 Ga0495588_0015340
340 Ga0495613_0052651
341 Ga0495684_0088515
342 Ga0496104_0059048
343 Ga0496105_0083618
344 Ga0496110_0123130
345 Ga0496115_0196593
346 Ga0496119_0106523
347 Ga0496122_0000832
348 Ga0496122_0001262
349 Ga0496123_0021672
350 Ga0496124_0000370
351 Ga0496125_0000015
352 Ga0496125_0007566
353 Ga0496126_0017809
354 Ga0501305_006544
355 Ga0501323_004815
356 Ga0501031_0064906
357 Ga0501031_0075817
358 Ga0501032_0001667
359 Ga0501032_0004288
360 Ga0501033_0016624
361 Ga0501034_0019940
362 Ga0501034_0022554
363 Ga0501034_0026929
364 Ga0501034_0030634
365 Ga0501034_0041350
366 Ga0501034_0076638
367 Ga0501036_0062451
368 Ga0501037_0038992
369 Ga0501038_0007433
370 Ga0501038_0071373
371 Ga0501039_0022297
372 Ga0501039_0044729
373 Ga0501042_0026380
374 Ga0501043_0021575
375 Ga0501046_0004091
376 Ga0501046_0150678
377 Ga0501047_0009853
378 Ga0501047_0010204
379 Ga0501047_0157591
380 Ga0501067_0060221
381 Ga0501074_0114442
382 Ga0501243_000166
383 Ga0501083_0037537
384 Ga0501035_0028785
385 Ga0501044_0005490
386 Ga0501044_0009395
387 nmdc:mga0rr50_57306_c1
388 Ga0495619_0045276
389 Ga0500643_003051
390 Ga0501082_0023906
391 Ga0501082_0047548
392 2644016578
393 2644082787
394 2644175025
395 2644505116
396 2644527439
397 2644665742
398 2644667493
399 2738697424
400 2739328020
401 2739609709
402 2760306369
403 2760625172
404 2776374390
405 2788433972
406 2809030035
407 2812362282
408 2835190013
409 2839987518
410 2884994430
411 2932433852
412 2935892543
413 8055417861
414 8056580584

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00285

Citrate_synt

Citrate synthase, C-terminal domain

105

474

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zu0-assembly1.cif.gz_E crystal structure of citrate synthase (glta) from pseudomonas aeruginosa 0.9082 6 427
7e8n-assembly1.cif.gz_A-2 crystal structure of type ii citrate synthase (hycs) from hymenobacter sp. pamc 26554 0.903 8 432
7e8n-assembly1.cif.gz_B-2 crystal structure of type ii citrate synthase (hycs) from hymenobacter sp. pamc 26554 0.9016 8 432
4e6y-assembly1.cif.gz_A type ii citrate synthase from vibrio vulnificus. 0.901 6 432
6zu0-assembly1.cif.gz_E crystal structure of citrate synthase (glta) from pseudomonas aeruginosa 0.8999 6 427
ID Description Score Start End Superfamily
3hwkC01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.9648 58 402 1.10.580.10
1ixeD01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.9572 57 408 1.10.580.10
2c6xA01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.957 57 268 1.10.580.10
1aj8B01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.9517 57 269 1.10.580.10
1ixeD01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.938 57 408 1.10.580.10
ID Description Score Start End GO Terms
AF-A0A2S1PGY7-F1-model_v4 Citrate synthase 0.9856 73 204 GO:0046912
AF-A0A7V8A9S1-F1-model_v4 Citrate synthase 0.9831 73 218 GO:0046912
AF-A1ED54-F1-model_v4 Citrate synthase 0.982 97 209 GO:0046912
AF-A0A1V3YYA6-F1-model_v4 deleted 0.9818 69 191
AF-A0A378BT05-F1-model_v4 Citrate synthase (Si) (EC 2.3.3.1) 0.9811 88 217 GO:0004108

Map