F316774

General Info

Members Datasets Scaffolds Average Seq Length
207 165 414 900

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_1665479|Ga0436363_1665479_1514_4312
Length 932
Sequence MNTDQAETIMGAVADPSTGRGLTAWHAMSAEGVVESLATDREKGLDAAEAAKRLLAYGPNRLPEGKKRGPLMRFLSQFNNVLVYVLLGAGFIKLMLNLWVDAAIIFGVVILNALLGFIQEGRAEKALDAIRNMLSAEARTVRGGETRMIAAEQLVPGDIVLLESGDKIPADMRLAEAKNLRTEEAALTGESVPADKNTDAVSDNSTVGDRECMAFSGTMVVSGRATGVVVATGEETELGRINALLSSVSALETPLLRQIKTFGYVITAVVAVVSVLVFAYGKWVKAMDFVELFQAVVGIAVSVIPEGLPAIITITLAIGVQRMAQRNAIIRRLPAVETLGSVSRICSDKTGTLTLMEMMVVSAVTAEAVYQVTGNGYAPEGEVKRDGEPAAMEPALTLMGRASMLCNDAELFQDEGAWKVEGDPTEGALYPFATKLGLDRRTEQAAFPRINAIPFESEHKFMATLHRSDDGKECLFVKGAPEVILEHCDRQQAASGQPLPLNRARFLQTADMLAGQGERVLALAWLENPGLTGSLTPGDLPKDLVLLGLIGLLDPPRKEAIEAVKECHGGGVRVTMITGDHKITAAAIAKMLGIGDGKTSVSGAEIEDMNEAALREKVRNVDVFARASPEHKLRLVKAIQANKQIVAMTGDGVNDAPALKKADIGVAMGIKGTEVTKEAAGMILADDNFASITAAVKEGRTVYNNIEKAILYMLPTNVAQGLVIMVAIFFHFTMPITAPQVLWVNMVTSVALALVISFEPHELDVMNRPPRAVDRPILTGFGIWRLLFIGVALLAITLWAFFWMRAQGASDELARTVAVNMITIGQVFYLLNSRYLLDSSLSFKAHLGNKYLPLGIAAVVILQLIFTYAPPLQAMFGNEAIPLWVWPWLFAAGLAFFLVVEAEKFVIRSSASLRRAVTASEAGTQLRQVTSA

Samples

Sample ID Description Type Environment
1 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
40 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
41 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
69 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
70 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
74 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
83 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
84 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
85 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
86 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
87 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
95 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
96 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
97 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
100 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
126 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
127 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
128 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
129 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
130 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
131 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
132 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
133 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
134 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
135 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
136 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
137 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
138 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
139 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
140 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
141 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
142 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
143 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
144 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
145 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
146 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
147 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
148 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
149 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
150 2855730933 Achromobacter sp. HZ28 Isolate Nodule
151 2855767633 Achromobacter sp. HZ34 Isolate Nodule
152 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
153 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
154 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
155 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
156 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
157 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
158 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
159 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
160 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
161 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
162 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
163 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
164 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
165 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 78.74
Metatranscriptomes 1.93
Isolates 19.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.35
Nodule 9.66
Rhizoplane 6.28
Rhizosphere 66.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436363_1665479 3300039450 Bacteria 7626
2 JGI25151J46595_10000410 3300003187 Bacteria 44063
3 Ga0055531_10000704 3300003794 Bacteria 28474
4 Ga0065165_1001676 3300005262 Bacteria 22412
5 Ga0070670_100038108 3300005331 Bacteria 4133
6 Ga0068868_100050162 3300005338 Bacteria 3276
7 Ga0070661_100032780 3300005344 Bacteria 3761
8 Ga0070709_10006279 3300005434 Bacteria 6472
9 Ga0070714_100004982 3300005435 Bacteria 10093
10 Ga0070713_100001581 3300005436 Bacteria 14577
11 Ga0070713_100045185 3300005436 Bacteria 3607
12 Ga0070711_100001862 3300005439 Bacteria 11790
13 Ga0070711_100007667 3300005439 Bacteria 6572
14 Ga0070708_100014257 3300005445 Bacteria 6532
15 Ga0070698_100014844 3300005471 Bacteria 8234
16 Ga0070697_100022889 3300005536 Bacteria 4968
17 Ga0070686_100006950 3300005544 Bacteria 6306
18 Ga0070665_100013454 3300005548 Bacteria 8231
19 Ga0068855_100032866 3300005563 Bacteria 6193
20 Ga0068856_100028690 3300005614 Bacteria 5436
21 Ga0068864_100021492 3300005618 Bacteria 5406
22 Ga0081455_10000783 3300005937 Bacteria 40885
23 Ga0081455_10000965 3300005937 Bacteria 36798
24 Ga0081455_10001588 3300005937 Bacteria 27804
25 Ga0081455_10001760 3300005937 Bacteria 26161
26 Ga0081455_10004475 3300005937 Bacteria 15647
27 Ga0081455_10006502 3300005937 Bacteria 12518
28 Ga0081538_10016337 3300005981 Bacteria 5697
29 Ga0081538_10029325 3300005981 Bacteria 3761
30 Ga0081540_1000206 3300005983 Bacteria 61639
31 Ga0081540_1014582 3300005983 Bacteria 5025
32 Ga0081540_1023657 3300005983 Bacteria 3587
33 Ga0070717_10000150 3300006028 Bacteria 51802
34 Ga0070717_10023056 3300006028 Bacteria 4926
35 Ga0070715_10002600 3300006163 Bacteria 5579
36 Ga0070716_100006061 3300006173 Bacteria 5892
37 Ga0070712_100026851 3300006175 Bacteria 3840
38 Ga0068871_100004433 3300006358 Bacteria 9765
39 Ga0075428_100010495 3300006844 Bacteria 10292
40 Ga0075428_100017799 3300006844 Bacteria 7851
41 Ga0075428_100092954 3300006844 Bacteria 3288
42 Ga0075431_100008298 3300006847 Bacteria 10388
43 Ga0075431_100064152 3300006847 Bacteria 3792
44 Ga0075433_10007864 3300006852 Bacteria 8479
45 Ga0111539_10004919 3300009094 Bacteria 17383
46 Ga0114129_10006789 3300009147 Bacteria 16254
47 Ga0105248_10005720 3300009177 Bacteria 13655
48 Ga0105248_10044008 3300009177 Bacteria 5008
49 Ga0157372_10018916 3300013307 Bacteria 7412
50 Ga0183362_10001 3300015683 Bacteria 2046624
51 Ga0213872_10004828 3300021361 Bacteria 7037
52 Ga0213872_10006102 3300021361 Bacteria 6098
53 Ga0213874_10002378 3300021377 Bacteria 4042
54 Ga0213875_10000921 3300021388 Bacteria 21238
55 Ga0213875_10009850 3300021388 Bacteria 4817
56 Ga0213871_10000513 3300021441 Bacteria 5337
57 Ga0209233_1001121 3300025261 Bacteria 10940
58 Ga0209025_1000018 3300025294 Bacteria 686898
59 Ga0209564_1005628 3300025295 Bacteria 7044
60 Ga0209256_1003852 3300025299 Bacteria 10013
61 Ga0209051_1000353 3300025303 Bacteria 68321
62 Ga0209257_1000022 3300025304 Bacteria 765258
63 Ga0207692_10017417 3300025898 Bacteria 3204
64 Ga0207710_10006757 3300025900 Bacteria 4889
65 Ga0207699_10000434 3300025906 Bacteria 21301
66 Ga0207699_10016388 3300025906 Bacteria 3875
67 Ga0207684_10006951 3300025910 Bacteria 10233
68 Ga0207693_10001161 3300025915 Bacteria 23500
69 Ga0207693_10007014 3300025915 Bacteria 9307
70 Ga0207693_10015129 3300025915 Bacteria 6193
71 Ga0207693_10030114 3300025915 Bacteria 4286
72 Ga0207693_10049540 3300025915 Bacteria 3298
73 Ga0207663_10002185 3300025916 Bacteria 9348
74 Ga0207663_10026608 3300025916 Bacteria 3360
75 Ga0207700_10001395 3300025928 Bacteria 13709
76 Ga0207700_10048197 3300025928 Bacteria 3162
77 Ga0207644_10019504 3300025931 Bacteria 4600
78 Ga0207709_10025169 3300025935 Bacteria 3406
79 Ga0207665_10000228 3300025939 Bacteria 38348
80 Ga0207711_10021599 3300025941 Bacteria 5377
81 Ga0207711_10022412 3300025941 Bacteria 5281
82 Ga0207703_10028203 3300026035 Bacteria 4423
83 Ga0207678_10004568 3300026067 Bacteria 12452
84 Ga0207702_10100051 3300026078 Bacteria 2557
85 Ga0207676_10004668 3300026095 Bacteria 9707
86 Ga0207683_10016661 3300026121 Bacteria 6254
87 Ga0268266_10026694 3300028379 Bacteria 4913
88 Ga0265338_10000037 3300028800 Bacteria 237244
89 Ga0265760_10003921 3300031090 Bacteria 4299
90 Ga0265339_10001462 3300031249 Bacteria 17474
91 Ga0316579_10005759 3300031691 Bacteria 5020
92 Ga0316576_10001991 3300031727 Bacteria 11433
93 Ga0316576_10006653 3300031727 Bacteria 7220
94 Ga0316576_10013526 3300031727 Bacteria 5429
95 Ga0316576_10037073 3300031727 Bacteria 3488
96 Ga0316583_10006842 3300032133 Bacteria 4107
97 Ga0316580_10001032 3300032139 Bacteria 6984
98 Ga0316593_10000531 3300032168 Bacteria 7095
99 Ga0316588_1001658 3300033528 Bacteria 3718
100 Ga0316596_1001594 3300033541 Bacteria 4640
101 Ga0373932_0001868 3300035112 Bacteria 5641
102 Ga0373945_0005505 3300035116 Bacteria 4054
103 Ga0373937_0058650 3300036401 Bacteria 3536
104 Ga0316584_0031612 3300036712 Bacteria 3914
105 Ga0373925_0005085 3300037068 Bacteria 9843
106 Ga0373925_0027277 3300037068 Bacteria 4182
107 Ga0395898_0007859 3300037466 Bacteria 11316
108 Ga0436364_0046915 3300037853 Bacteria 7988
109 Ga0436365_0283327 3300039437 Bacteria 8341
110 Ga0436365_1399118 3300039437 Bacteria 4935
111 Ga0436361_0113791 3300039447 Bacteria 4749
112 Ga0436361_0309863 3300039447 Bacteria 9695
113 Ga0436361_0846926 3300039447 Bacteria 9820
114 Ga0436361_0848360 3300039447 Bacteria 59191
115 Ga0436363_1115381 3300039450 Bacteria 8755
116 Ga0436363_1244476 3300039450 Bacteria 19872
117 Ga0466960_0010941 3300044901 Bacteria 3778
118 Ga0466967_0002498 3300045976 Bacteria 11486
119 Ga0495592_0015102 3300046454 Bacteria 5865
120 Ga0495629_0003861 3300046459 Bacteria 11297
121 Ga0495639_0009154 3300046475 Bacteria 4244
122 Ga0495662_0005008 3300046476 Bacteria 6638
123 Ga0495664_0023102 3300046477 Bacteria 3606
124 Ga0495594_0012318 3300046499 Bacteria 4455
125 Ga0495618_0006646 3300046514 Bacteria 7008
126 Ga0495630_0008853 3300046517 Bacteria 7229
127 Ga0495666_0005840 3300046526 Bacteria 6203
128 Ga0495652_0043133 3300046529 Bacteria 3887
129 Ga0495665_0011095 3300046531 Bacteria 4876
130 Ga0495640_0029903 3300046533 Bacteria 3904
131 Ga0495587_0032283 3300046536 Bacteria 3166
132 Ga0495622_0007766 3300046557 Bacteria 4982
133 Ga0495635_0015986 3300046663 Bacteria 5242
134 Ga0495588_0022435 3300046674 Bacteria 3120
135 Ga0495646_0020374 3300046680 Bacteria 4196
136 Ga0495658_0003236 3300046683 Bacteria 8110
137 Ga0495658_0006161 3300046683 Bacteria 5884
138 Ga0495613_0020839 3300046689 Bacteria 4887
139 Ga0495600_0002479 3300046809 Bacteria 10594
140 Ga0495604_0042904 3300047317 Bacteria 3543
141 Ga0495674_0015457 3300047319 Bacteria 7132
142 Ga0495674_0053888 3300047319 Bacteria 3534
143 Ga0495680_0008485 3300047322 Bacteria 9335
144 Ga0495680_0017861 3300047322 Bacteria 6037
145 Ga0495614_0001699 3300048089 Bacteria 9602
146 Ga0496101_0023158 3300048904 Bacteria 4286
147 Ga0496102_0060069 3300048905 Bacteria 3478
148 Ga0496104_0000615 3300048907 Bacteria 30527
149 Ga0496104_0000908 3300048907 Bacteria 25370
150 Ga0496105_0000053 3300048908 Bacteria 89666
151 Ga0496105_0006793 3300048908 Bacteria 8800
152 Ga0496106_0025593 3300048909 Bacteria 4393
153 Ga0496107_0015063 3300048910 Bacteria 5417
154 Ga0496110_0027130 3300048913 Bacteria 4907
155 Ga0496111_0010255 3300048914 Bacteria 6277
156 Ga0496114_0017855 3300048917 Bacteria 5734
157 Ga0496114_0024884 3300048917 Bacteria 4888
158 Ga0496115_0002178 3300048918 Bacteria 14019
159 Ga0496119_0001698 3300048922 Bacteria 25728
160 Ga0501034_0005597 3300049571 Bacteria 13683
161 Ga0501077_0018412 3300049593 Bacteria 4419
162 nmdc:mga05p37_7923_c1 3300050507 Bacteria 12538
163 nmdc:mga06r32_3030_c1 3300050510 Bacteria 15057
164 nmdc:mga0a205_4489_c1 3300050515 Bacteria 12521
165 Ga0495601_0034591 3300053077 Bacteria 3153
166 Ga0495595_0018024 3300053084 Bacteria 3045
167 Ga0495619_0000439 3300053085 Bacteria 28081
168 2501071548 2501025501 Bacteria 7768574
169 2501077064 2501025502 Bacteria 9641094
170 2501407046 2501025504 Bacteria 8008976
171 2509146817 2508501128 Bacteria 8613869
172 2510246558 2510065045 Bacteria 7761063
173 2511092747 2510917013 Bacteria 9951648
174 2511097941 2510917014 Bacteria 8296963
175 2511108128 2510917015 Bacteria 7950052
176 2512353246 2512047030 Bacteria 9031815
177 2513554895 2513237082 Bacteria 8640282
178 2513562982 2513237083 Bacteria 8410967
179 2513675607 2513237098 Bacteria 9902361
180 2513716291 2513237104 Bacteria 10034502
181 2513889942 2513237141 Bacteria 8496279
182 2515683960 2515154122 Bacteria 8609520
183 2516019843 2515154189 Bacteria 9629850
184 2524437097 2524023205 Bacteria 8918781
185 2524463800 2524023210 Bacteria 9029266
186 2719644122 2718217991 Bacteria 7829542
187 2728754162 2728368998 Bacteria 8720350
188 2745076310 2744054633 Bacteria 8678936
189 2753565442 2751185846 Bacteria 7242164
190 2753568301 2751185846 Bacteria 7242164
191 2852391731 2852387548 Bacteria 8025568
192 2855731713 2855730933 Bacteria 7047938
193 2855768419 2855767633 Bacteria 7049357
194 2876770173 2876761206 Bacteria 10111113
195 2881413384 2881412998 Bacteria 6492157
196 2883091903 2883087390 Bacteria 9532701
197 2885278629 2885270888 Bacteria 9831543
198 2885375216 2885374607 Bacteria 8927485
199 2885387463 2885383462 Bacteria 9473874
200 2885416518 2885409591 Bacteria 9235467
201 2902687133 2902682994 Bacteria 8951596
202 2903756423 2903748898 Bacteria 9972761
203 2903769137 2903768456 Bacteria 9749579
204 8003955857 8003955200 Bacteria 8601927
205 8046767258 8046767195 Bacteria 7547379
206 8056682486 8056681323 Bacteria 8472857
207 8057581647 8057575449 Bacteria 7367519
208 Ga0436363_1665479
209 JGI25151J46595_10000410
210 Ga0055531_10000704
211 Ga0065165_1001676
212 Ga0070670_100038108
213 Ga0068868_100050162
214 Ga0070661_100032780
215 Ga0070709_10006279
216 Ga0070714_100004982
217 Ga0070713_100001581
218 Ga0070713_100045185
219 Ga0070711_100001862
220 Ga0070711_100007667
221 Ga0070708_100014257
222 Ga0070698_100014844
223 Ga0070697_100022889
224 Ga0070686_100006950
225 Ga0070665_100013454
226 Ga0068855_100032866
227 Ga0068856_100028690
228 Ga0068864_100021492
229 Ga0081455_10000783
230 Ga0081455_10000965
231 Ga0081455_10001588
232 Ga0081455_10001760
233 Ga0081455_10004475
234 Ga0081455_10006502
235 Ga0081538_10016337
236 Ga0081538_10029325
237 Ga0081540_1000206
238 Ga0081540_1014582
239 Ga0081540_1023657
240 Ga0070717_10000150
241 Ga0070717_10023056
242 Ga0070715_10002600
243 Ga0070716_100006061
244 Ga0070712_100026851
245 Ga0068871_100004433
246 Ga0075428_100010495
247 Ga0075428_100017799
248 Ga0075428_100092954
249 Ga0075431_100008298
250 Ga0075431_100064152
251 Ga0075433_10007864
252 Ga0111539_10004919
253 Ga0114129_10006789
254 Ga0105248_10005720
255 Ga0105248_10044008
256 Ga0157372_10018916
257 Ga0183362_10001
258 Ga0213872_10004828
259 Ga0213872_10006102
260 Ga0213874_10002378
261 Ga0213875_10000921
262 Ga0213875_10009850
263 Ga0213871_10000513
264 Ga0209233_1001121
265 Ga0209025_1000018
266 Ga0209564_1005628
267 Ga0209256_1003852
268 Ga0209051_1000353
269 Ga0209257_1000022
270 Ga0207692_10017417
271 Ga0207710_10006757
272 Ga0207699_10000434
273 Ga0207699_10016388
274 Ga0207684_10006951
275 Ga0207693_10001161
276 Ga0207693_10007014
277 Ga0207693_10015129
278 Ga0207693_10030114
279 Ga0207693_10049540
280 Ga0207663_10002185
281 Ga0207663_10026608
282 Ga0207700_10001395
283 Ga0207700_10048197
284 Ga0207644_10019504
285 Ga0207709_10025169
286 Ga0207665_10000228
287 Ga0207711_10021599
288 Ga0207711_10022412
289 Ga0207703_10028203
290 Ga0207678_10004568
291 Ga0207702_10100051
292 Ga0207676_10004668
293 Ga0207683_10016661
294 Ga0268266_10026694
295 Ga0265338_10000037
296 Ga0265760_10003921
297 Ga0265339_10001462
298 Ga0316579_10005759
299 Ga0316576_10001991
300 Ga0316576_10006653
301 Ga0316576_10013526
302 Ga0316576_10037073
303 Ga0316583_10006842
304 Ga0316580_10001032
305 Ga0316593_10000531
306 Ga0316588_1001658
307 Ga0316596_1001594
308 Ga0373932_0001868
309 Ga0373945_0005505
310 Ga0373937_0058650
311 Ga0316584_0031612
312 Ga0373925_0005085
313 Ga0373925_0027277
314 Ga0395898_0007859
315 Ga0436364_0046915
316 Ga0436365_0283327
317 Ga0436365_1399118
318 Ga0436361_0113791
319 Ga0436361_0309863
320 Ga0436361_0846926
321 Ga0436361_0848360
322 Ga0436363_1115381
323 Ga0436363_1244476
324 Ga0466960_0010941
325 Ga0466967_0002498
326 Ga0495592_0015102
327 Ga0495629_0003861
328 Ga0495639_0009154
329 Ga0495662_0005008
330 Ga0495664_0023102
331 Ga0495594_0012318
332 Ga0495618_0006646
333 Ga0495630_0008853
334 Ga0495666_0005840
335 Ga0495652_0043133
336 Ga0495665_0011095
337 Ga0495640_0029903
338 Ga0495587_0032283
339 Ga0495622_0007766
340 Ga0495635_0015986
341 Ga0495588_0022435
342 Ga0495646_0020374
343 Ga0495658_0003236
344 Ga0495658_0006161
345 Ga0495613_0020839
346 Ga0495600_0002479
347 Ga0495604_0042904
348 Ga0495674_0015457
349 Ga0495674_0053888
350 Ga0495680_0008485
351 Ga0495680_0017861
352 Ga0495614_0001699
353 Ga0496101_0023158
354 Ga0496102_0060069
355 Ga0496104_0000615
356 Ga0496104_0000908
357 Ga0496105_0000053
358 Ga0496105_0006793
359 Ga0496106_0025593
360 Ga0496107_0015063
361 Ga0496110_0027130
362 Ga0496111_0010255
363 Ga0496114_0017855
364 Ga0496114_0024884
365 Ga0496115_0002178
366 Ga0496119_0001698
367 Ga0501034_0005597
368 Ga0501077_0018412
369 nmdc:mga05p37_7923_c1
370 nmdc:mga06r32_3030_c1
371 nmdc:mga0a205_4489_c1
372 Ga0495601_0034591
373 Ga0495595_0018024
374 Ga0495619_0000439
375 2501071548
376 2501077064
377 2501407046
378 2509146817
379 2510246558
380 2511092747
381 2511097941
382 2511108128
383 2512353246
384 2513554895
385 2513562982
386 2513675607
387 2513716291
388 2513889942
389 2515683960
390 2516019843
391 2524437097
392 2524463800
393 2719644122
394 2728754162
395 2745076310
396 2753565442
397 2753568301
398 2852391731
399 2855731713
400 2855768419
401 2876770173
402 2881413384
403 2883091903
404 2885278629
405 2885375216
406 2885387463
407 2885416518
408 2902687133
409 2903756423
410 2903769137
411 8003955857
412 8046767258
413 8056682486
414 8057581647

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00690

Cation_ATPase_N

Cation transporter/ATPase, N-terminus

25

93

0.98

PF13246

Cation_ATPase

Cation transport ATPase (P-type)

404

491

0.98

PF00122

E1-E2_ATPase

E1-E2 ATPase

132

326

0.96

PF00689

Cation_ATPase_C

Cation transporting ATPase, C-terminus

733

906

0.96

PF12710

HAD

haloacid dehalogenase-like hydrolase

538

660

0.86

PF08282

Hydrolase_3

haloacid dehalogenase-like hydrolase

632

696

0.84

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

469

663

0.83

Map