F315559

General Info

Members Datasets Scaffolds Average Seq Length
206 134 199 265

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0036372|Ga0495625_0036372_2103_2978
Length 291
Sequence MADKVVIVVQARMASSRLPGKVLMPVLGKSILALMIERLQMIQHTATIVIATSINKEDDVIDNEAQLINIPCYRGDLNNLLDRHYQAALLFDADVVIKIPSDCPLIDPRIIDHVLAWFFEHKGQYDFVSNLHPATYPDGNDVEIMTMPCLKQTWENADKPLELEHTTPYIWENPQLFSIGNVSWETGLDYSMSHRFTIDYREDYLFIKRVFEELYPANKSFSCDDIINLLDRKPDIYQINAQYAGVNWYRHHLNELKTIQPEQTKQAPENLIVDSFIKIDLWKIQNIVSRN

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
3 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
4 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
5 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
6 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
7 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
8 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
9 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
10 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
11 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
12 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
13 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
14 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
17 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
21 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
22 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
23 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
24 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
25 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
28 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
29 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
30 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
33 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
88 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
89 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
90 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
91 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
92 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
93 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
96 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
97 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
98 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
99 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
100 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
109 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
115 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
120 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
121 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
125 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
128 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
131 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
132 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
133 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
134 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.15
Metatranscriptomes 0.97
Isolates 3.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.05
Nodule 0
Rhizoplane 0.49
Rhizosphere 75.24
Stem 0
Stem Tuber 0
Unclassified 9.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10004265 3300001979 Bacteria 6164
2 JGI24739J22299_10000609 3300001989 Bacteria 12933
3 JGI24739J22299_10001237 3300001989 Bacteria 9609
4 JGI24739J22299_10008929 3300001989 Bacteria 3739
5 JGI24737J22298_10000858 3300001990 Bacteria 10841
6 JGI24735J21928_10000002 3300002067 Bacteria 624895
7 JGI25162J39368_1000022 3300002737 Bacteria 239510
8 JGI25154J39366_1000065 3300002738 Bacteria 104126
9 JGI25157J39369_1007497 3300002741 Bacteria 1572
10 JGI25153J46596_10051526 3300003215 Unclassified 1178
11 rootH1_10003740 3300003316 Bacteria 21380
12 rootH1_10003740 3300003323 Bacteria 6583
13 rootH2_10001891 3300003320 Bacteria 464318
14 rootH2_10033210 3300003320 Bacteria 28982
15 rootH2_10119283 3300003320 Bacteria 3100
16 rootL2_10100602 3300003322 Bacteria 17649
17 rootL2_10287367 3300003322 Bacteria 3264
18 rootH1_10045022 3300003323 Bacteria 11969
19 rootH1_10168402 3300003323 Bacteria 4046
20 rootH1_10200549 3300003323 Bacteria 1757
21 JGI25160J50197_1010690 3300003354 Bacteria 3301
22 JGI25160J50197_1019715 3300003354 Bacteria 2059
23 JGI25160J50197_1028074 3300003354 Bacteria 1518
24 Ga0055526_1026026 3300003771 Bacteria 1859
25 Ga0055526_1026393 3300003771 Bacteria 1833
26 Ga0055526_1044792 3300003771 Bacteria 1064
27 Ga0055528_1001114 3300003790 Bacteria 17623
28 Ga0055530_10001972 3300003791 Bacteria 13962
29 Ga0058863_11759973 3300004799 Bacteria 6002
30 Ga0058861_10722512 3300004800 Bacteria 2572
31 Ga0065165_1000328 3300005262 Bacteria 77624
32 Ga0070680_100025695 3300005336 Bacteria 4708
33 Ga0068868_100045573 3300005338 Bacteria 3431
34 Ga0070660_100079000 3300005339 Bacteria 2581
35 Ga0070674_100216337 3300005356 Unclassified 1488
36 Ga0070659_100320245 3300005366 Bacteria 1296
37 Ga0070714_100000098 3300005435 Bacteria 74167
38 Ga0070710_10127668 3300005437 Bacteria 1547
39 Ga0070681_10043758 3300005458 Bacteria 4483
40 Ga0068853_100070894 3300005539 Bacteria 3034
41 Ga0068855_100000426 3300005563 Bacteria 52084
42 Ga0068855_100013311 3300005563 Bacteria 9921
43 Ga0068855_100028056 3300005563 Bacteria 6733
44 Ga0068855_100209854 3300005563 Bacteria 2189
45 Ga0068855_100401530 3300005563 Bacteria 1502
46 Ga0068856_100017692 3300005614 Bacteria 6911
47 Ga0068856_100051872 3300005614 Bacteria 4044
48 Ga0068858_100124601 3300005842 Bacteria 2412
49 Ga0075366_10011311 3300006195 Bacteria 5036
50 Ga0068871_100000114 3300006358 Bacteria 49426
51 Ga0075429_100292439 3300006880 Bacteria 1426
52 Ga0105240_10019752 3300009093 Bacteria 8999
53 Ga0105240_10035558 3300009093 Bacteria 6418
54 Ga0105240_10382312 3300009093 Bacteria 1590
55 Ga0105240_10841829 3300009093 Bacteria 991
56 Ga0105247_10021405 3300009101 Bacteria 3891
57 Ga0114129_10527625 3300009147 Bacteria 1538
58 Ga0105241_10000611 3300009174 Bacteria 26865
59 Ga0105241_10389379 3300009174 Unclassified 1220
60 Ga0105237_10001755 3300009545 Bacteria 28040
61 Ga0105237_10030718 3300009545 Bacteria 5454
62 Ga0105237_10045332 3300009545 Bacteria 4426
63 Ga0105237_10048520 3300009545 Bacteria 4268
64 Ga0105238_10141878 3300009551 Unclassified 2379
65 Ga0105239_10000002 3300010375 Bacteria 610298
66 Ga0105239_10000094 3300010375 Bacteria 124925
67 Ga0105239_10000590 3300010375 Bacteria 51676
68 Ga0105239_10001710 3300010375 Bacteria 28899
69 Ga0105239_10006661 3300010375 Bacteria 13357
70 Ga0105239_10017749 3300010375 Bacteria 7872
71 Ga0105239_10045550 3300010375 Bacteria 4808
72 Ga0105239_10150815 3300010375 Bacteria 2594
73 Ga0105239_10655410 3300010375 Bacteria 1199
74 Ga0105246_10034555 3300011119 Bacteria 3371
75 Ga0157371_10005662 3300013102 Bacteria 10488
76 Ga0157371_10131944 3300013102 Bacteria 1778
77 Ga0157369_10087008 3300013105 Bacteria 3337
78 Ga0157369_10576797 3300013105 Bacteria 1162
79 Ga0157374_10000203 3300013296 Bacteria 54699
80 Ga0157374_10311725 3300013296 Bacteria 1558
81 Ga0157378_10049086 3300013297 Bacteria 3754
82 Ga0157378_10085985 3300013297 Unclassified 2850
83 Ga0163162_10000074 3300013306 Bacteria 91138
84 Ga0163162_10001325 3300013306 Bacteria 23128
85 Ga0157372_10001233 3300013307 Bacteria 27695
86 Ga0157372_10054843 3300013307 Bacteria 4449
87 Ga0157375_10003586 3300013308 Bacteria 13472
88 Ga0163163_10186971 3300014325 Bacteria 2119
89 Ga0157379_10042559 3300014968 Bacteria 4055
90 Ga0182007_10051263 3300015262 Bacteria 1362
91 Ga0163161_10146066 3300017792 Bacteria 1794
92 Ga0213872_10005165 3300021361 Bacteria 6759
93 Ga0209437_100024 3300025233 Bacteria 592878
94 Ga0209646_1000002 3300025246 Bacteria 1425781
95 Ga0209026_1001914 3300025250 Bacteria 8428
96 Ga0209455_1000960 3300025272 Bacteria 14685
97 Ga0209455_1004547 3300025272 Bacteria 4502
98 Ga0209673_1000464 3300025273 Bacteria 68394
99 Ga0209564_1004557 3300025295 Bacteria 8409
100 Ga0209564_1011365 3300025295 Bacteria 3999
101 Ga0209564_1034087 3300025295 Bacteria 1500
102 Ga0209758_1001454 3300025297 Bacteria 27809
103 Ga0209758_1013960 3300025297 Bacteria 4321
104 Ga0209758_1017641 3300025297 Bacteria 3540
105 Ga0209050_1000591 3300025298 Bacteria 57888
106 Ga0207426_1000009 3300025302 Bacteria 797229
107 Ga0207426_1001316 3300025302 Bacteria 21180
108 Ga0207426_1004769 3300025302 Bacteria 6452
109 Ga0209257_1005075 3300025304 Bacteria 9557
110 Ga0207710_10045632 3300025900 Unclassified 1954
111 Ga0207647_10009336 3300025904 Bacteria 6972
112 Ga0207654_10002517 3300025911 Bacteria 9311
113 Ga0207654_10236341 3300025911 Unclassified 1219
114 Ga0207707_10023104 3300025912 Bacteria 5441
115 Ga0207695_10030528 3300025913 Bacteria 5931
116 Ga0207695_10187011 3300025913 Bacteria 1990
117 Ga0207695_10256909 3300025913 Bacteria 1646
118 Ga0207695_10454105 3300025913 Bacteria 1164
119 Ga0207671_10003164 3300025914 Bacteria 16641
120 Ga0207671_10018292 3300025914 Bacteria 5379
121 Ga0207671_10026949 3300025914 Bacteria 4300
122 Ga0207671_10047300 3300025914 Bacteria 3184
123 Ga0207657_10053340 3300025919 Bacteria 3503
124 Ga0207664_10000208 3300025929 Bacteria 44416
125 Ga0207690_10274069 3300025932 Bacteria 1312
126 Ga0207667_10016254 3300025949 Bacteria 8408
127 Ga0207667_10020961 3300025949 Bacteria 7248
128 Ga0207667_10060790 3300025949 Bacteria 3954
129 Ga0207677_10271658 3300026023 Bacteria 1387
130 Ga0207703_10117401 3300026035 Bacteria 2279
131 Ga0207639_10038877 3300026041 Bacteria 3542
132 Ga0207702_10000133 3300026078 Bacteria 88338
133 Ga0207674_10304182 3300026116 Bacteria 1544
134 Ga0265337_1073118 3300028556 Bacteria 941
135 Ga0265319_1002289 3300028563 Bacteria 10564
136 Ga0265334_10012610 3300028573 Bacteria 3549
137 Ga0265318_10000841 3300028577 Bacteria 20210
138 Ga0265323_10011455 3300028653 Unclassified 3578
139 Ga0265322_10001681 3300028654 Bacteria 7037
140 Ga0265322_10007454 3300028654 Unclassified 3193
141 Ga0265336_10000071 3300028666 Bacteria 84442
142 Ga0265338_10001026 3300028800 Bacteria 46840
143 Ga0265338_10115907 3300028800 Unclassified 2147
144 Ga0265338_10179487 3300028800 Bacteria 1616
145 Ga0265338_10235360 3300028800 Bacteria 1359
146 Ga0265324_10000298 3300029957 Bacteria 36891
147 Ga0265324_10002727 3300029957 Bacteria 8782
148 Ga0265324_10012599 3300029957 Bacteria 3184
149 Ga0265330_10001291 3300031235 Bacteria 14654
150 Ga0265332_10002305 3300031238 Bacteria 9762
151 Ga0265320_10022794 3300031240 Bacteria 3343
152 Ga0265320_10031400 3300031240 Unclassified 2728
153 Ga0265325_10009751 3300031241 Bacteria 5596
154 Ga0265325_10125988 3300031241 Bacteria 1231
155 Ga0265329_10034822 3300031242 Unclassified 1626
156 Ga0265339_10021915 3300031249 Unclassified 3708
157 Ga0265331_10101289 3300031250 Bacteria 1325
158 Ga0265327_10000587 3300031251 Bacteria 61096
159 Ga0265327_10103991 3300031251 Unclassified 1366
160 Ga0265316_10025787 3300031344 Unclassified 4899
161 Ga0307509_10107247 3300031507 Bacteria 2809
162 Ga0265313_10007307 3300031595 Bacteria 7582
163 Ga0265314_10044542 3300031711 Unclassified 3145
164 Ga0265342_10002069 3300031712 Bacteria 17796
165 Ga0265342_10018292 3300031712 Bacteria 4542
166 Ga0316584_0288667 3300036712 Unclassified 1190
167 Ga0395899_0000001 3300037312 Bacteria 1750322
168 Ga0436361_0407050 3300039447 Bacteria 4797
169 Ga0453684_0085057 3300044712 Bacteria 3932
170 Ga0453684_0724509 3300044712 Bacteria 1079
171 Ga0495651_0124742 3300046462 Bacteria 1887
172 Ga0495650_0000014 3300046471 Bacteria 581606
173 Ga0495585_0002602 3300046492 Bacteria 12757
174 Ga0495583_0112010 3300046506 Bacteria 1155
175 Ga0495606_0000096 3300046507 Bacteria 151500
176 Ga0495606_0003823 3300046507 Bacteria 15606
177 Ga0495606_0010321 3300046507 Bacteria 7767
178 Ga0495610_0002514 3300046512 Bacteria 15313
179 Ga0495610_0127027 3300046512 Bacteria 1111
180 Ga0495616_0026734 3300046513 Bacteria 3067
181 Ga0495637_0074520 3300046520 Bacteria 1363
182 Ga0495652_0228590 3300046529 Bacteria 1393
183 Ga0495625_0000003 3300046660 Bacteria 686847
184 Ga0495625_0036372 3300046660 Bacteria 3620
185 Ga0495625_0073252 3300046660 Bacteria 2401
186 Ga0495661_0004785 3300046665 Bacteria 9713
187 Ga0495649_0000002 3300046694 Bacteria 1093458
188 Ga0495660_0016464 3300046810 Bacteria 4263
189 Ga0495687_003262 3300047443 Bacteria 11964
190 Ga0495679_043201 3300047446 Bacteria 1387
191 Ga0495673_0059997 3300047469 Bacteria 1633
192 Ga0495686_0000098 3300047472 Bacteria 183131
193 Ga0495686_0001302 3300047472 Bacteria 28111
194 Ga0495686_0001599 3300047472 Bacteria 23920
195 Ga0495686_0207781 3300047472 Bacteria 1120
196 nmdc:mga0k408_2803_c1 3300050493 Bacteria 9255
197 Ga0500557_129686 3300053105 Bacteria 835
198 Ga0500616_0139857 3300053153 Bacteria 1133
199 Ga0500624_002043 3300053157 Bacteria 2829

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025297 Ga0209758_1013960 Ga0209758_10139604 233
2 3300013306 Ga0163162_10000074 Ga0163162_1000007431 235
3 3300046660 Ga0495625_0073252 Ga0495625_0073252_112_819 235
4 3300028573 Ga0265334_10012610 Ga0265334_100126102 236
5 3300028577 Ga0265318_10000841 Ga0265318_100008418 236
6 3300028654 Ga0265322_10001681 Ga0265322_100016815 236
7 3300028666 Ga0265336_10000071 Ga0265336_1000007142 236
8 3300029957 Ga0265324_10012599 Ga0265324_100125993 236
9 3300031240 Ga0265320_10022794 Ga0265320_100227943 236
10 3300031241 Ga0265325_10009751 Ga0265325_100097512 236
11 3300031595 Ga0265313_10007307 Ga0265313_100073076 236
12 3300031712 Ga0265342_10018292 Ga0265342_100182924 236
13 3300047472 Ga0495686_0207781 Ga0495686_0207781_53_763 236
14 3300001989 JGI24739J22299_10008929 JGI24739J22299_100089292 239
15 3300001990 JGI24737J22298_10000858 JGI24737J22298_100008585 239
16 3300002067 JGI24735J21928_10000002 JGI24735J21928_10000002457 239
17 3300026116 Ga0207674_10304182 Ga0207674_103041822 239
18 3300003320 rootH2_10033210 rootH2_1003321014 244
19 3300005614 Ga0068856_100017692 Ga0068856_1000176925 244
20 3300010375 Ga0105239_10000590 Ga0105239_100005902 244
21 3300025913 Ga0207695_10454105 Ga0207695_104541052 244
22 3300025914 Ga0207671_10047300 Ga0207671_100473002 244
23 3300036712 Ga0316584_0288667 Ga0316584_0288667_408_1145 245
24 3300053105 Ga0500557_129686 Ga0500557_129686_64_801 245
25 3300025304 Ga0209257_1005075 Ga0209257_10050754 246
26 3300009093 Ga0105240_10382312 Ga0105240_103823122 247
27 3300009174 Ga0105241_10389379 Ga0105241_103893792 247
28 3300009545 Ga0105237_10045332 Ga0105237_100453323 247
29 3300025913 Ga0207695_10187011 Ga0207695_101870112 247
30 3300031250 Ga0265331_10101289 Ga0265331_101012891 247
31 3300009093 Ga0105240_10019752 Ga0105240_1001975210 249
32 3300009545 Ga0105237_10001755 Ga0105237_100017559 249
33 3300009551 Ga0105238_10141878 Ga0105238_101418783 249
34 3300010375 Ga0105239_10006661 Ga0105239_100066612 249
35 3300046512 Ga0495610_0002514 Ga0495610_0002514_1891_2649 250
36 3300046492 Ga0495585_0002602 Ga0495585_0002602_11666_12427 251
37 3300005435 Ga0070714_100000098 Ga0070714_10000009820 256
38 3300025929 Ga0207664_10000208 Ga0207664_1000020818 256
39 3300009147 Ga0114129_10527625 Ga0114129_105276252 257
40 3300031507 Ga0307509_10107247 Ga0307509_101072473 257
41 3300044712 Ga0453684_0724509 Ga0453684_0724509_191_1006 257
42 3300005356 Ga0070674_100216337 Ga0070674_1002163372 259
43 3300025295 Ga0209564_1004557 Ga0209564_10045579 259
44 3300003354 JGI25160J50197_1019715 JGI25160J50197_10197152 260
45 3300025302 Ga0207426_1000009 Ga0207426_100000917 260
46 3300046471 Ga0495650_0000014 Ga0495650_0000014_160878_161666 260
47 3300003322 rootL2_10100602 rootL2_101006027 261
48 3300013105 Ga0157369_10576797 Ga0157369_105767972 261
49 3300013306 Ga0163162_10001325 Ga0163162_1000132517 261
50 3300046506 Ga0495583_0112010 Ga0495583_0112010_32_823 261
51 3300046507 Ga0495606_0000096 Ga0495606_0000096_70235_71026 261
52 3300046507 Ga0495606_0003823 Ga0495606_0003823_14606_15391 261
53 3300046513 Ga0495616_0026734 Ga0495616_0026734_1665_2456 261
54 3300046520 Ga0495637_0074520 Ga0495637_0074520_88_879 261
55 3300046660 Ga0495625_0000003 Ga0495625_0000003_73885_74676 261
56 3300046665 Ga0495661_0004785 Ga0495661_0004785_4177_4968 261
57 3300046694 Ga0495649_0000002 Ga0495649_0000002_932288_933079 261
58 3300046810 Ga0495660_0016464 Ga0495660_0016464_2882_3667 261
59 3300047469 Ga0495673_0059997 Ga0495673_0059997_556_1347 261
60 3300009101 Ga0105247_10021405 Ga0105247_100214052 263
61 3300014325 Ga0163163_10186971 Ga0163163_101869712 263
62 3300014968 Ga0157379_10042559 Ga0157379_100425594 263
63 3300025272 Ga0209455_1004547 Ga0209455_10045473 263
64 3300025900 Ga0207710_10045632 Ga0207710_100456322 263
65 3300026035 Ga0207703_10117401 Ga0207703_101174011 263
66 3300046529 Ga0495652_0228590 Ga0495652_0228590_501_1292 263
67 3300031241 Ga0265325_10125988 Ga0265325_101259882 264
68 3300028800 Ga0265338_10179487 Ga0265338_101794872 265
69 3300001989 JGI24739J22299_10000609 JGI24739J22299_100006094 266
70 3300003320 rootH2_10119283 rootH2_101192833 266
71 3300003354 JGI25160J50197_1010690 JGI25160J50197_10106902 266
72 3300003771 Ga0055526_1026026 Ga0055526_10260261 266
73 3300003771 Ga0055526_1026393 Ga0055526_10263931 266
74 3300003790 Ga0055528_1001114 Ga0055528_10011144 266
75 3300003791 Ga0055530_10001972 Ga0055530_100019723 266
76 3300005262 Ga0065165_1000328 Ga0065165_100032815 266
77 3300025273 Ga0209673_1000464 Ga0209673_100046441 266
78 3300025295 Ga0209564_1011365 Ga0209564_10113654 266
79 3300025295 Ga0209564_1034087 Ga0209564_10340872 266
80 3300025297 Ga0209758_1001454 Ga0209758_100145414 266
81 3300025298 Ga0209050_1000591 Ga0209050_100059116 266
82 3300025302 Ga0207426_1001316 Ga0207426_100131621 266
83 3300002737 JGI25162J39368_1000022 JGI25162J39368_100002247 267
84 3300003323 rootH1_10045022 rootH1_100450225 267
85 3300005563 Ga0068855_100028056 Ga0068855_1000280563 267
86 3300009545 Ga0105237_10048520 Ga0105237_100485201 267
87 3300010375 Ga0105239_10000094 Ga0105239_1000009447 267
88 3300010375 Ga0105239_10001710 Ga0105239_1000171012 267
89 3300017792 Ga0163161_10146066 Ga0163161_101460662 267
90 3300025233 Ga0209437_100024 Ga0209437_100024360 267
91 3300025914 Ga0207671_10018292 Ga0207671_100182924 267
92 3300025949 Ga0207667_10060790 Ga0207667_100607902 267
93 3300053153 Ga0500616_0139857 Ga0500616_0139857_280_1083 267
94 iso_pu_bacteria 2919437846 2919442120 267
95 3300006880 Ga0075429_100292439 Ga0075429_1002924392 268
96 3300009545 Ga0105237_10030718 Ga0105237_100307182 268
97 3300025914 Ga0207671_10003164 Ga0207671_1000316414 268
98 3300028556 Ga0265337_1073118 Ga0265337_10731182 268
99 3300028563 Ga0265319_1002289 Ga0265319_10022899 268
100 3300028653 Ga0265323_10011455 Ga0265323_100114554 268
101 3300028654 Ga0265322_10007454 Ga0265322_100074542 268
102 3300028800 Ga0265338_10001026 Ga0265338_1000102642 268
103 3300028800 Ga0265338_10115907 Ga0265338_101159072 268
104 3300028800 Ga0265338_10235360 Ga0265338_102353602 268
105 3300029957 Ga0265324_10000298 Ga0265324_1000029821 268
106 3300029957 Ga0265324_10002727 Ga0265324_100027277 268
107 3300031235 Ga0265330_10001291 Ga0265330_100012918 268
108 3300031238 Ga0265332_10002305 Ga0265332_100023057 268
109 3300031240 Ga0265320_10031400 Ga0265320_100314002 268
110 3300031242 Ga0265329_10034822 Ga0265329_100348222 268
111 3300031249 Ga0265339_10021915 Ga0265339_100219152 268
112 3300031344 Ga0265316_10025787 Ga0265316_100257873 268
113 3300031711 Ga0265314_10044542 Ga0265314_100445423 268
114 3300031712 Ga0265342_10002069 Ga0265342_100020692 268
115 iso_pu_bacteria 2977232053 2977236741 268
116 3300003323 rootH1_10200549 rootH1_102005492 269
117 3300004799 Ga0058863_11759973 Ga0058863_117599732 269
118 3300004800 Ga0058861_10722512 Ga0058861_107225122 269
119 3300005336 Ga0070680_100025695 Ga0070680_1000256953 269
120 3300005437 Ga0070710_10127668 Ga0070710_101276682 269
121 3300005458 Ga0070681_10043758 Ga0070681_100437582 269
122 3300005563 Ga0068855_100000426 Ga0068855_10000042619 269
123 3300005614 Ga0068856_100051872 Ga0068856_1000518723 269
124 3300009093 Ga0105240_10841829 Ga0105240_108418291 269
125 3300010375 Ga0105239_10150815 Ga0105239_101508153 269
126 3300013297 Ga0157378_10049086 Ga0157378_100490862 269
127 3300021361 Ga0213872_10005165 Ga0213872_100051655 269
128 3300025272 Ga0209455_1000960 Ga0209455_10009608 269
129 3300025911 Ga0207654_10236341 Ga0207654_102363412 269
130 3300025912 Ga0207707_10023104 Ga0207707_100231043 269
131 3300025913 Ga0207695_10256909 Ga0207695_102569092 269
132 3300025914 Ga0207671_10026949 Ga0207671_100269492 269
133 3300025949 Ga0207667_10016254 Ga0207667_100162545 269
134 3300031251 Ga0265327_10103991 Ga0265327_101039911 269
135 3300039447 Ga0436361_0407050 Ga0436361_0407050_2327_3136 269
136 3300044712 Ga0453684_0085057 Ga0453684_0085057_52_861 269
137 3300046462 Ga0495651_0124742 Ga0495651_0124742_540_1349 269
138 3300047472 Ga0495686_0000098 Ga0495686_0000098_181300_182109 269
139 3300047472 Ga0495686_0001599 Ga0495686_0001599_22124_22933 269
140 iso_pu_bacteria 2599185184 2599478498 269
141 iso_pu_bacteria 2928078545 2928080450 269
142 iso_pu_bacteria 2928147474 2928149378 269
143 iso_pu_bacteria 2932082852 2932083207 269
144 3300003322 rootL2_10287367 rootL2_102873673 270
145 3300003323 rootH1_10168402 rootH1_101684022 270
146 3300010375 Ga0105239_10045550 Ga0105239_100455503 271
147 3300026078 Ga0207702_10000133 Ga0207702_1000013396 271
148 3300037312 Ga0395899_0000001 Ga0395899_0000001_736010_736828 271
149 3300047472 Ga0495686_0001302 Ga0495686_0001302_5421_6236 271
150 3300013296 Ga0157374_10311725 Ga0157374_103117252 272
151 3300046512 Ga0495610_0127027 Ga0495610_0127027_40_864 272
152 iso_pu_bacteria 2929921140 2929923825 272
153 3300001989 JGI24739J22299_10001237 JGI24739J22299_100012375 273
154 3300003316 rootH1_10003740 rootH1_100037406 273
155 3300003320 rootH2_10001891 rootH2_10001891374 273
156 3300005338 Ga0068868_100045573 Ga0068868_1000455731 273
157 3300005339 Ga0070660_100079000 Ga0070660_1000790003 273
158 3300005366 Ga0070659_100320245 Ga0070659_1003202451 273
159 3300005539 Ga0068853_100070894 Ga0068853_1000708942 273
160 3300005563 Ga0068855_100013311 Ga0068855_1000133116 273
161 3300005563 Ga0068855_100209854 Ga0068855_1002098542 273
162 3300005563 Ga0068855_100401530 Ga0068855_1004015302 273
163 3300005842 Ga0068858_100124601 Ga0068858_1001246011 273
164 3300006195 Ga0075366_10011311 Ga0075366_100113115 273
165 3300006358 Ga0068871_100000114 Ga0068871_10000011434 273
166 3300009093 Ga0105240_10035558 Ga0105240_100355583 273
167 3300009174 Ga0105241_10000611 Ga0105241_100006113 273
168 3300010375 Ga0105239_10000002 Ga0105239_10000002534 273
169 3300010375 Ga0105239_10017749 Ga0105239_100177493 273
170 3300010375 Ga0105239_10655410 Ga0105239_106554102 273
171 3300011119 Ga0105246_10034555 Ga0105246_100345552 273
172 3300013102 Ga0157371_10005662 Ga0157371_100056623 273
173 3300013102 Ga0157371_10131944 Ga0157371_101319442 273
174 3300013105 Ga0157369_10087008 Ga0157369_100870082 273
175 3300013296 Ga0157374_10000203 Ga0157374_1000020358 273
176 3300013297 Ga0157378_10085985 Ga0157378_100859852 273
177 3300013307 Ga0157372_10001233 Ga0157372_1000123310 273
178 3300013307 Ga0157372_10054843 Ga0157372_100548432 273
179 3300013308 Ga0157375_10003586 Ga0157375_100035869 273
180 3300015262 Ga0182007_10051263 Ga0182007_100512632 273
181 3300025904 Ga0207647_10009336 Ga0207647_100093362 273
182 3300025911 Ga0207654_10002517 Ga0207654_100025177 273
183 3300025913 Ga0207695_10030528 Ga0207695_100305283 273
184 3300025919 Ga0207657_10053340 Ga0207657_100533402 273
185 3300025932 Ga0207690_10274069 Ga0207690_102740691 273
186 3300025949 Ga0207667_10020961 Ga0207667_100209614 273
187 3300026023 Ga0207677_10271658 Ga0207677_102716582 273
188 3300026041 Ga0207639_10038877 Ga0207639_100388772 273
189 3300031251 Ga0265327_10000587 Ga0265327_1000058728 273
190 3300046507 Ga0495606_0010321 Ga0495606_0010321_1477_2304 273
191 3300046660 Ga0495625_0036372 Ga0495625_0036372_2103_2978 273
192 3300047443 Ga0495687_003262 Ga0495687_003262_6822_7655 273
193 3300047446 Ga0495679_043201 Ga0495679_043201_114_941 273
194 3300050493 nmdc:mga0k408_2803_c1 nmdc:mga0k408_2803_c1_3284_4111 273
195 3300053157 Ga0500624_002043 Ga0500624_002043_86_913 273
196 iso_pu_bacteria 8003151029 8003153530 274
197 3300003215 JGI25153J46596_10051526 JGI25153J46596_100515261 275
198 3300003771 Ga0055526_1044792 Ga0055526_10447922 275
199 3300001979 JGI24740J21852_10004265 JGI24740J21852_100042654 277
200 3300002738 JGI25154J39366_1000065 JGI25154J39366_100006524 277
201 3300002741 JGI25157J39369_1007497 JGI25157J39369_10074972 277
202 3300003354 JGI25160J50197_1028074 JGI25160J50197_10280742 277
203 3300025246 Ga0209646_1000002 Ga0209646_10000021149 277
204 3300025250 Ga0209026_1001914 Ga0209026_10019147 277
205 3300025297 Ga0209758_1017641 Ga0209758_10176413 277
206 3300025302 Ga0207426_1004769 Ga0207426_10047692 277

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02348

CTP_transf_3

Cytidylyltransferase

6

267

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6oew-assembly1.cif.gz_A structure of a cytidylyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.9645 7 241
6oew-assembly1.cif.gz_A structure of a cytidylyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.9291 7 241
4xwi-assembly1.cif.gz_A x-ray crystal structure of cmp-kdo synthase from pseudomonas aeruginosa 0.7737 9 216
2we9-assembly1.cif.gz_A crystal structure of rv0371c from mycobacterium tuberculosis h37rv 0.7645 9 213
3oam-assembly2.cif.gz_D crystal structure of cytidylyltransferase from vibrio cholerae 0.7621 9 217
ID Description Score Start End Superfamily
af_Q58463_1_208_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9618 7 216 3.90.550.10
af_Q58463_1_208_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9394 7 216 3.90.550.10
af_Q58059_26_153_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8821 53 79 3.40.50.1980
af_Q58282_93_223_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8792 53 78 3.40.50.1980
af_A0A2R8RQE4_29_167_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7864 9 126 3.90.550.10
ID Description Score Start End GO Terms
AF-I0AJS3-F1-model_v4 Polysaccharide biosynthesis protein 0.9985 7 271 GO:0005829
AF-I0AJS3-F1-model_v4 Polysaccharide biosynthesis protein 0.9948 7 271 GO:0005829
AF-A0A7Y8J383-F1-model_v4 NTP transferase domain-containing protein 0.9939 17 184 GO:0005829
GO:0016740
AF-A0A7Y7TLX7-F1-model_v4 Glycosyltransferase family protein 0.9921 7 244 GO:0005829
GO:0016740
AF-A0A519SU71-F1-model_v4 Acylneuraminate cytidylyltransferase 0.9921 41 271 GO:0016779

Feature Viewer

pLDDT pTM Quality
94.19 0.91 High
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Predicted Structure (AlphaFold2)

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