F315262
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 206 | 124 | 205 | 409 |
Family's Representative Sequence
| Representative Sequence | 3300028563|Ga0265319_1000772|Ga0265319_100077220 |
| Length | 432 |
| Sequence | VRESPRLPMPEDLTALVTAMAVRARAASLALAVSPGSARNAALMDLADRIERSHGALLASNALDLASAKAGGLAPAQVDRLTLTPERLAHLAESVRQVAALPDPLGEVLEESTRPNGLRLRKVRVPIGVIGVIFEARPNVTVDCAVLCLKSGNASILRGGKEIFETNRALAALISASLGAAGLPADAVQLVPTTDRAALEALLRLDAYIHCIIPRGGEGLIRFVAENSTIPVIKHFTGVCFVYLDKGADPAMAESIAVNAKTQRPGVCNAAEQILVHADVAAALLPRVGRALAAKGVALRCDGASAGILGNAGIAAEPASAADFTTEFLDLVVAVRVVASLDEAVATINRDGSAHSDAIVTADRAAADRFMAGVDSAAVFWNASTRFNDGFEFGFGAEIGISTDRLHARGPMGLRELCSYKWLVTGTGQVRG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2786546517 | Verrucomicrobia bacterium LW23 | Isolate | Rhizoplane |
| 2 | 3300000546 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 5 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 20 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 21 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 25 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 29 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 30 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 47 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 48 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 49 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 50 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 51 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 52 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 53 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 54 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 55 | 3300030760 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 56 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 57 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 58 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 59 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 60 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 61 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 62 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 63 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 64 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 65 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 66 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 67 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 68 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 69 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 70 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 71 | 3300033547 | Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 | Metagenome | Unclassified |
| 72 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 73 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 74 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 75 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 76 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 77 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 78 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 79 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 80 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 81 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 82 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 83 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 84 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 85 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 86 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 87 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 88 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 89 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 90 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 91 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 92 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 93 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 94 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 95 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 96 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 97 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 98 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 99 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 110 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 111 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 112 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049675 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control | Metagenome | Rhizosphere |
| 122 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.06 |
| Metatranscriptomes | 1.46 |
| Isolates | 0.49 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 2.43 |
| Rhizosphere | 95.15 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | LJNas_1002495 | 3300000546 | Unclassified | 2212 |
| 2 | Ga0068869_100005476 | 3300005334 | Bacteria | 7988 |
| 3 | Ga0068868_100013319 | 3300005338 | Bacteria | 6028 |
| 4 | Ga0070661_100111889 | 3300005344 | Bacteria | 2040 |
| 5 | Ga0070709_10001176 | 3300005434 | Bacteria | 14381 |
| 6 | Ga0070709_10018303 | 3300005434 | Unclassified | 4032 |
| 7 | Ga0070709_10152732 | 3300005434 | Bacteria | 1597 |
| 8 | Ga0070714_100000054 | 3300005435 | Bacteria | 104948 |
| 9 | Ga0070714_100027172 | 3300005435 | Unclassified | 4736 |
| 10 | Ga0070714_100034601 | 3300005435 | Unclassified | 4231 |
| 11 | Ga0070713_100000498 | 3300005436 | Bacteria | 25128 |
| 12 | Ga0070713_100001446 | 3300005436 | Bacteria | 15197 |
| 13 | Ga0070713_100007595 | 3300005436 | Bacteria | 7625 |
| 14 | Ga0070713_100018115 | 3300005436 | Bacteria | 5350 |
| 15 | Ga0070713_100028240 | 3300005436 | Bacteria | 4429 |
| 16 | Ga0070710_10008212 | 3300005437 | Bacteria | 5079 |
| 17 | Ga0070711_100000884 | 3300005439 | Bacteria | 15765 |
| 18 | Ga0070708_100000264 | 3300005445 | Bacteria | 39070 |
| 19 | Ga0070706_100003783 | 3300005467 | Bacteria | 14772 |
| 20 | Ga0070706_100037475 | 3300005467 | Bacteria | 4478 |
| 21 | Ga0070707_100002864 | 3300005468 | Bacteria | 16421 |
| 22 | Ga0070707_100041082 | 3300005468 | Bacteria | 4426 |
| 23 | Ga0070698_100003301 | 3300005471 | Bacteria | 17744 |
| 24 | Ga0070698_100053361 | 3300005471 | Bacteria | 4108 |
| 25 | Ga0070699_100000890 | 3300005518 | Bacteria | 27902 |
| 26 | Ga0070697_100006468 | 3300005536 | Bacteria | 9069 |
| 27 | Ga0070693_100019068 | 3300005547 | Bacteria | 3590 |
| 28 | Ga0070665_100000201 | 3300005548 | Bacteria | 105051 |
| 29 | Ga0068863_100004239 | 3300005841 | Bacteria | 14162 |
| 30 | Ga0068858_100000093 | 3300005842 | Bacteria | 93236 |
| 31 | Ga0068858_100016590 | 3300005842 | Bacteria | 6918 |
| 32 | Ga0070717_10001747 | 3300006028 | Bacteria | 15137 |
| 33 | Ga0070717_10005527 | 3300006028 | Bacteria | 9220 |
| 34 | Ga0070717_10069427 | 3300006028 | Bacteria | 2934 |
| 35 | Ga0070712_100002863 | 3300006175 | Bacteria | 10685 |
| 36 | Ga0070712_100007552 | 3300006175 | Bacteria | 6795 |
| 37 | Ga0070712_100163454 | 3300006175 | Bacteria | 1721 |
| 38 | Ga0070712_100192953 | 3300006175 | Bacteria | 1595 |
| 39 | Ga0097621_100004026 | 3300006237 | Bacteria | 10190 |
| 40 | Ga0068871_100007250 | 3300006358 | Bacteria | 7908 |
| 41 | Ga0105240_10017693 | 3300009093 | Bacteria | 9598 |
| 42 | Ga0105240_10155091 | 3300009093 | Bacteria | 2724 |
| 43 | Ga0105245_10002634 | 3300009098 | Bacteria | 16148 |
| 44 | Ga0105237_10001781 | 3300009545 | Bacteria | 27847 |
| 45 | Ga0105237_10187195 | 3300009545 | Bacteria | 2070 |
| 46 | Ga0213872_10021331 | 3300021361 | Bacteria | 2983 |
| 47 | Ga0213872_10030362 | 3300021361 | Unclassified | 2477 |
| 48 | Ga0213872_10067411 | 3300021361 | Bacteria | 1615 |
| 49 | Ga0213876_10002293 | 3300021384 | Bacteria | 11290 |
| 50 | Ga0207685_10006699 | 3300025905 | Unclassified | 3158 |
| 51 | Ga0207699_10000189 | 3300025906 | Bacteria | 37481 |
| 52 | Ga0207684_10000831 | 3300025910 | Bacteria | 35568 |
| 53 | Ga0207684_10046672 | 3300025910 | Bacteria | 3675 |
| 54 | Ga0207695_10035290 | 3300025913 | Bacteria | 5426 |
| 55 | Ga0207671_10005621 | 3300025914 | Bacteria | 11501 |
| 56 | Ga0207671_10013138 | 3300025914 | Bacteria | 6614 |
| 57 | Ga0207693_10000210 | 3300025915 | Bacteria | 53555 |
| 58 | Ga0207693_10002274 | 3300025915 | Bacteria | 16708 |
| 59 | Ga0207693_10194707 | 3300025915 | Bacteria | 1595 |
| 60 | Ga0207663_10000312 | 3300025916 | Bacteria | 21175 |
| 61 | Ga0207663_10024440 | 3300025916 | Bacteria | 3480 |
| 62 | Ga0207646_10000694 | 3300025922 | Bacteria | 43557 |
| 63 | Ga0207646_10025816 | 3300025922 | Bacteria | 5371 |
| 64 | Ga0207646_10065964 | 3300025922 | Bacteria | 3231 |
| 65 | Ga0207700_10003215 | 3300025928 | Bacteria | 9431 |
| 66 | Ga0207700_10003648 | 3300025928 | Bacteria | 8977 |
| 67 | Ga0207700_10006287 | 3300025928 | Bacteria | 7167 |
| 68 | Ga0207700_10007117 | 3300025928 | Bacteria | 6814 |
| 69 | Ga0207664_10000166 | 3300025929 | Bacteria | 52994 |
| 70 | Ga0207664_10111945 | 3300025929 | Bacteria | 2272 |
| 71 | Ga0207706_10136381 | 3300025933 | Bacteria | 2159 |
| 72 | Ga0207689_10000433 | 3300025942 | Bacteria | 39201 |
| 73 | Ga0207677_10042349 | 3300026023 | Bacteria | 3018 |
| 74 | Ga0207703_10000241 | 3300026035 | Bacteria | 62119 |
| 75 | Ga0207703_10007923 | 3300026035 | Bacteria | 8398 |
| 76 | Ga0207648_10002742 | 3300026089 | Bacteria | 18716 |
| 77 | Ga0268266_10000197 | 3300028379 | Bacteria | 105077 |
| 78 | Ga0265337_1001663 | 3300028556 | Bacteria | 10798 |
| 79 | Ga0265337_1006043 | 3300028556 | Bacteria | 4722 |
| 80 | Ga0265319_1000772 | 3300028563 | Bacteria | 20801 |
| 81 | Ga0265319_1003266 | 3300028563 | Bacteria | 8533 |
| 82 | Ga0265319_1019304 | 3300028563 | Bacteria | 2547 |
| 83 | Ga0265319_1025176 | 3300028563 | Bacteria | 2133 |
| 84 | Ga0265319_1054559 | 3300028563 | Bacteria | 1310 |
| 85 | Ga0265334_10011274 | 3300028573 | Bacteria | 3766 |
| 86 | Ga0265318_10000500 | 3300028577 | Bacteria | 28677 |
| 87 | Ga0265318_10002837 | 3300028577 | Bacteria | 9045 |
| 88 | Ga0265318_10003495 | 3300028577 | Bacteria | 7878 |
| 89 | Ga0265323_10000171 | 3300028653 | Bacteria | 38942 |
| 90 | Ga0265323_10001177 | 3300028653 | Bacteria | 13355 |
| 91 | Ga0265323_10001939 | 3300028653 | Bacteria | 9760 |
| 92 | Ga0265323_10017656 | 3300028653 | Bacteria | 2769 |
| 93 | Ga0265322_10000427 | 3300028654 | Bacteria | 17150 |
| 94 | Ga0265322_10006284 | 3300028654 | Bacteria | 3495 |
| 95 | Ga0265338_10000407 | 3300028800 | Bacteria | 77238 |
| 96 | Ga0265338_10002745 | 3300028800 | Bacteria | 25824 |
| 97 | Ga0265324_10007193 | 3300029957 | Bacteria | 4544 |
| 98 | Ga0307511_10000128 | 3300030521 | Bacteria | 69098 |
| 99 | Ga0265762_1001841 | 3300030760 | Bacteria | 3855 |
| 100 | Ga0265760_10001169 | 3300031090 | Bacteria | 7662 |
| 101 | Ga0265760_10005788 | 3300031090 | Bacteria | 3534 |
| 102 | Ga0265320_10000143 | 3300031240 | Bacteria | 60406 |
| 103 | Ga0265320_10000753 | 3300031240 | Bacteria | 24878 |
| 104 | Ga0265320_10001500 | 3300031240 | Bacteria | 17002 |
| 105 | Ga0265320_10009344 | 3300031240 | Bacteria | 5921 |
| 106 | Ga0265320_10031849 | 3300031240 | Bacteria | 2705 |
| 107 | Ga0265320_10069914 | 3300031240 | Bacteria | 1656 |
| 108 | Ga0265325_10001881 | 3300031241 | Bacteria | 14484 |
| 109 | Ga0265325_10038330 | 3300031241 | Bacteria | 2530 |
| 110 | Ga0265339_10057914 | 3300031249 | Bacteria | 2094 |
| 111 | Ga0265331_10019608 | 3300031250 | Bacteria | 3490 |
| 112 | Ga0265327_10009426 | 3300031251 | Bacteria | 7046 |
| 113 | Ga0265316_10001877 | 3300031344 | Bacteria | 22057 |
| 114 | Ga0265316_10009521 | 3300031344 | Bacteria | 8943 |
| 115 | Ga0265316_10015485 | 3300031344 | Bacteria | 6665 |
| 116 | Ga0265316_10017768 | 3300031344 | Bacteria | 6132 |
| 117 | Ga0265316_10027941 | 3300031344 | Bacteria | 4661 |
| 118 | Ga0265316_10062813 | 3300031344 | Bacteria | 2882 |
| 119 | Ga0265316_10066777 | 3300031344 | Bacteria | 2782 |
| 120 | Ga0265316_10122667 | 3300031344 | Bacteria | 1962 |
| 121 | Ga0307408_100000007 | 3300031548 | Bacteria | 463086 |
| 122 | Ga0265313_10000706 | 3300031595 | Bacteria | 34509 |
| 123 | Ga0265313_10002266 | 3300031595 | Bacteria | 16903 |
| 124 | Ga0265313_10004205 | 3300031595 | Bacteria | 11169 |
| 125 | Ga0265313_10004355 | 3300031595 | Bacteria | 10934 |
| 126 | Ga0265314_10003558 | 3300031711 | Bacteria | 15029 |
| 127 | Ga0265314_10072583 | 3300031711 | Bacteria | 2298 |
| 128 | Ga0265342_10002108 | 3300031712 | Bacteria | 17547 |
| 129 | Ga0265342_10006849 | 3300031712 | Bacteria | 8423 |
| 130 | Ga0265342_10010088 | 3300031712 | Bacteria | 6585 |
| 131 | Ga0265342_10021770 | 3300031712 | Bacteria | 4087 |
| 132 | Ga0265342_10101713 | 3300031712 | Bacteria | 1636 |
| 133 | Ga0316576_10006347 | 3300031727 | Bacteria | 7349 |
| 134 | Ga0307410_10000036 | 3300031852 | Bacteria | 48225 |
| 135 | Ga0307409_100000294 | 3300031995 | Bacteria | 20206 |
| 136 | Ga0307416_100000065 | 3300032002 | Bacteria | 94719 |
| 137 | Ga0316212_1001241 | 3300033547 | Bacteria | 3439 |
| 138 | Ga0373944_0009117 | 3300035089 | Bacteria | 2686 |
| 139 | Ga0373936_0033363 | 3300035113 | Bacteria | 2040 |
| 140 | Ga0373953_0037717 | 3300035117 | Bacteria | 1908 |
| 141 | Ga0373954_0011269 | 3300035118 | Bacteria | 3959 |
| 142 | Ga0373956_0003855 | 3300035119 | Bacteria | 6028 |
| 143 | Ga0373943_0000013 | 3300035170 | Bacteria | 62136 |
| 144 | Ga0373955_0020877 | 3300035172 | Bacteria | 3297 |
| 145 | Ga0373955_0108276 | 3300035172 | Bacteria | 1604 |
| 146 | Ga0316574_0002789 | 3300035398 | Bacteria | 8872 |
| 147 | Ga0373935_0022367 | 3300035692 | Bacteria | 3876 |
| 148 | Ga0373927_0000478 | 3300035695 | Bacteria | 30759 |
| 149 | Ga0373947_0003915 | 3300035725 | Bacteria | 8753 |
| 150 | Ga0373947_0078307 | 3300035725 | Bacteria | 2040 |
| 151 | Ga0373947_0088509 | 3300035725 | Bacteria | 1927 |
| 152 | Ga0373937_0029343 | 3300036401 | Bacteria | 4982 |
| 153 | Ga0316584_0043970 | 3300036712 | Bacteria | 3331 |
| 154 | Ga0373925_0002498 | 3300037068 | Bacteria | 14692 |
| 155 | Ga0373925_0019878 | 3300037068 | Bacteria | 4885 |
| 156 | Ga0373925_0033684 | 3300037068 | Bacteria | 3774 |
| 157 | Ga0395905_0000016 | 3300037471 | Bacteria | 382308 |
| 158 | Ga0436364_0337469 | 3300037853 | Bacteria | 2281 |
| 159 | Ga0436365_1889837 | 3300039437 | Bacteria | 134049 |
| 160 | Ga0436360_0288584 | 3300039438 | Unclassified | 3264 |
| 161 | Ga0436361_1067905 | 3300039447 | Unclassified | 2207 |
| 162 | Ga0436361_1077812 | 3300039447 | Bacteria | 3616 |
| 163 | Ga0436361_1095601 | 3300039447 | Bacteria | 5623 |
| 164 | Ga0436361_1148886 | 3300039447 | Bacteria | 2929 |
| 165 | Ga0451577_0009452 | 3300042876 | Bacteria | 9388 |
| 166 | Ga0453683_0002601 | 3300044673 | Bacteria | 13857 |
| 167 | Ga0466966_0001705 | 3300044684 | Bacteria | 14200 |
| 168 | Ga0466961_0067863 | 3300044693 | Bacteria | 2265 |
| 169 | Ga0466963_0298763 | 3300044694 | Bacteria | 1132 |
| 170 | Ga0453684_0000045 | 3300044712 | Bacteria | 582917 |
| 171 | Ga0453684_0040170 | 3300044712 | Bacteria | 6361 |
| 172 | Ga0466957_0030781 | 3300044842 | Bacteria | 3205 |
| 173 | Ga0451576_0000146 | 3300045051 | Bacteria | 179707 |
| 174 | Ga0451576_0002143 | 3300045051 | Bacteria | 30592 |
| 175 | Ga0451576_0012136 | 3300045051 | Bacteria | 9714 |
| 176 | Ga0451576_0100355 | 3300045051 | Bacteria | 3010 |
| 177 | Ga0451576_0162315 | 3300045051 | Bacteria | 2332 |
| 178 | Ga0495653_0072711 | 3300046463 | Bacteria | 2567 |
| 179 | Ga0495580_0002148 | 3300046472 | Bacteria | 17314 |
| 180 | Ga0495580_0066740 | 3300046472 | Bacteria | 2518 |
| 181 | Ga0495582_0001982 | 3300046473 | Bacteria | 11477 |
| 182 | Ga0495630_0031031 | 3300046517 | Bacteria | 3978 |
| 183 | Ga0495588_0029817 | 3300046674 | Bacteria | 2738 |
| 184 | Ga0495623_0089134 | 3300046679 | Bacteria | 1897 |
| 185 | Ga0495669_0081111 | 3300046684 | Bacteria | 1489 |
| 186 | Ga0495674_0015167 | 3300047319 | Bacteria | 7208 |
| 187 | Ga0495674_0169580 | 3300047319 | Bacteria | 1822 |
| 188 | Ga0495602_0090298 | 3300048088 | Bacteria | 2545 |
| 189 | Ga0496100_0034965 | 3300048903 | Bacteria | 3158 |
| 190 | Ga0496104_0036707 | 3300048907 | Unclassified | 4582 |
| 191 | Ga0496105_0150838 | 3300048908 | Bacteria | 1910 |
| 192 | Ga0496115_0096926 | 3300048918 | Bacteria | 2415 |
| 193 | Ga0501031_0008669 | 3300049568 | Bacteria | 6612 |
| 194 | Ga0501032_0023956 | 3300049569 | Bacteria | 4216 |
| 195 | Ga0501034_0065976 | 3300049571 | Bacteria | 3633 |
| 196 | Ga0501036_0076585 | 3300049572 | Bacteria | 2829 |
| 197 | Ga0501037_0195333 | 3300049573 | Bacteria | 1431 |
| 198 | Ga0501038_0037666 | 3300049574 | Bacteria | 4239 |
| 199 | Ga0501042_0044559 | 3300049578 | Bacteria | 3161 |
| 200 | Ga0501068_0114781 | 3300049584 | Bacteria | 1676 |
| 201 | Ga0501073_0041326 | 3300049589 | Bacteria | 3258 |
| 202 | Ga0501243_000478 | 3300049675 | Bacteria | 5317 |
| 203 | Ga0501045_0189176 | 3300049824 | Bacteria | 1534 |
| 204 | Ga0495601_0031833 | 3300053077 | Bacteria | 3280 |
| 205 | Ga0501082_0075550 | 3300060353 | Bacteria | 2903 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044694 | Ga0466963_0298763 | Ga0466963_0298763_22_1017 | 326 |
| 2 | 3300005842 | Ga0068858_100000093 | Ga0068858_10000009376 | 357 |
| 3 | 3300026035 | Ga0207703_10000241 | Ga0207703_1000024119 | 357 |
| 4 | 3300045051 | Ga0451576_0162315 | Ga0451576_0162315_382_1809 | 358 |
| 5 | 3300046674 | Ga0495588_0029817 | Ga0495588_0029817_475_1776 | 369 |
| 6 | 3300028577 | Ga0265318_10002837 | Ga0265318_100028376 | 370 |
| 7 | 3300031344 | Ga0265316_10015485 | Ga0265316_100154856 | 370 |
| 8 | 3300031595 | Ga0265313_10000706 | Ga0265313_100007069 | 370 |
| 9 | 3300031712 | Ga0265342_10006849 | Ga0265342_100068497 | 370 |
| 10 | 3300045051 | Ga0451576_0002143 | Ga0451576_0002143_4415_5689 | 371 |
| 11 | 3300025933 | Ga0207706_10136381 | Ga0207706_101363812 | 372 |
| 12 | 3300028563 | Ga0265319_1054559 | Ga0265319_10545591 | 372 |
| 13 | 3300028573 | Ga0265334_10011274 | Ga0265334_100112743 | 372 |
| 14 | 3300028800 | Ga0265338_10000407 | Ga0265338_1000040733 | 372 |
| 15 | 3300029957 | Ga0265324_10007193 | Ga0265324_100071932 | 372 |
| 16 | 3300031240 | Ga0265320_10031849 | Ga0265320_100318492 | 372 |
| 17 | 3300031241 | Ga0265325_10001881 | Ga0265325_100018815 | 372 |
| 18 | 3300031344 | Ga0265316_10027941 | Ga0265316_100279412 | 372 |
| 19 | 3300031595 | Ga0265313_10002266 | Ga0265313_100022661 | 372 |
| 20 | 3300049675 | Ga0501243_000478 | Ga0501243_000478_2082_3416 | 373 |
| 21 | 3300049571 | Ga0501034_0065976 | Ga0501034_0065976_2291_3568 | 378 |
| 22 | 3300049572 | Ga0501036_0076585 | Ga0501036_0076585_1312_2589 | 378 |
| 23 | 3300049573 | Ga0501037_0195333 | Ga0501037_0195333_124_1401 | 378 |
| 24 | 3300049578 | Ga0501042_0044559 | Ga0501042_0044559_243_1520 | 378 |
| 25 | 3300049584 | Ga0501068_0114781 | Ga0501068_0114781_251_1528 | 378 |
| 26 | 3300049824 | Ga0501045_0189176 | Ga0501045_0189176_124_1401 | 378 |
| 27 | 3300060353 | Ga0501082_0075550 | Ga0501082_0075550_1059_2336 | 378 |
| 28 | 3300005467 | Ga0070706_100037475 | Ga0070706_1000374752 | 379 |
| 29 | 3300005471 | Ga0070698_100053361 | Ga0070698_1000533615 | 379 |
| 30 | 3300021361 | Ga0213872_10030362 | Ga0213872_100303621 | 379 |
| 31 | 3300025910 | Ga0207684_10046672 | Ga0207684_100466724 | 379 |
| 32 | 3300039438 | Ga0436360_0288584 | Ga0436360_0288584_1474_2736 | 379 |
| 33 | 3300039447 | Ga0436361_1067905 | Ga0436361_1067905_105_1367 | 379 |
| 34 | 3300039437 | Ga0436365_1889837 | Ga0436365_1889837_73416_74579 | 380 |
| 35 | 3300005334 | Ga0068869_100005476 | Ga0068869_1000054765 | 381 |
| 36 | 3300005338 | Ga0068868_100013319 | Ga0068868_1000133193 | 381 |
| 37 | 3300006237 | Ga0097621_100004026 | Ga0097621_1000040262 | 381 |
| 38 | 3300006358 | Ga0068871_100007250 | Ga0068871_1000072502 | 381 |
| 39 | 3300025942 | Ga0207689_10000433 | Ga0207689_1000043334 | 381 |
| 40 | 3300026023 | Ga0207677_10042349 | Ga0207677_100423492 | 381 |
| 41 | 3300026089 | Ga0207648_10002742 | Ga0207648_1000274218 | 381 |
| 42 | 3300009098 | Ga0105245_10002634 | Ga0105245_1000263413 | 383 |
| 43 | 3300045051 | Ga0451576_0000146 | Ga0451576_0000146_136971_138248 | 383 |
| 44 | 3300045051 | Ga0451576_0012136 | Ga0451576_0012136_4901_6178 | 383 |
| 45 | 3300031548 | Ga0307408_100000007 | Ga0307408_100000007266 | 386 |
| 46 | 3300032002 | Ga0307416_100000065 | Ga0307416_10000006549 | 386 |
| 47 | 3300044842 | Ga0466957_0030781 | Ga0466957_0030781_1150_2412 | 386 |
| 48 | 3300049568 | Ga0501031_0008669 | Ga0501031_0008669_4979_6256 | 386 |
| 49 | 3300049569 | Ga0501032_0023956 | Ga0501032_0023956_2582_3859 | 386 |
| 50 | 3300049574 | Ga0501038_0037666 | Ga0501038_0037666_2931_4208 | 386 |
| 51 | 3300031727 | Ga0316576_10006347 | Ga0316576_100063477 | 387 |
| 52 | 3300035398 | Ga0316574_0002789 | Ga0316574_0002789_7339_8613 | 387 |
| 53 | 3300036712 | Ga0316584_0043970 | Ga0316584_0043970_1874_3148 | 387 |
| 54 | 3300037853 | Ga0436364_0337469 | Ga0436364_0337469_147_1409 | 389 |
| 55 | 3300031344 | Ga0265316_10062813 | Ga0265316_100628131 | 390 |
| 56 | 3300031712 | Ga0265342_10021770 | Ga0265342_100217701 | 392 |
| 57 | 3300048908 | Ga0496105_0150838 | Ga0496105_0150838_289_1581 | 392 |
| 58 | 3300028653 | Ga0265323_10000171 | Ga0265323_1000017120 | 393 |
| 59 | 3300028654 | Ga0265322_10000427 | Ga0265322_100004271 | 393 |
| 60 | 3300031344 | Ga0265316_10001877 | Ga0265316_100018779 | 393 |
| 61 | 3300031712 | Ga0265342_10002108 | Ga0265342_100021084 | 393 |
| 62 | 3300031090 | Ga0265760_10005788 | Ga0265760_100057882 | 394 |
| 63 | 3300044712 | Ga0453684_0040170 | Ga0453684_0040170_4278_5576 | 396 |
| 64 | 3300045051 | Ga0451576_0100355 | Ga0451576_0100355_1122_2420 | 396 |
| 65 | 3300044673 | Ga0453683_0002601 | Ga0453683_0002601_11398_12696 | 397 |
| 66 | 3300021361 | Ga0213872_10067411 | Ga0213872_100674112 | 398 |
| 67 | 3300039447 | Ga0436361_1095601 | Ga0436361_1095601_192_1454 | 398 |
| 68 | 3300006175 | Ga0070712_100192953 | Ga0070712_1001929532 | 400 |
| 69 | 3300025915 | Ga0207693_10194707 | Ga0207693_101947072 | 400 |
| 70 | 3300028653 | Ga0265323_10001939 | Ga0265323_100019393 | 401 |
| 71 | 3300035089 | Ga0373944_0009117 | Ga0373944_0009117_605_1897 | 404 |
| 72 | 3300005436 | Ga0070713_100018115 | Ga0070713_1000181153 | 405 |
| 73 | 3300025928 | Ga0207700_10003648 | Ga0207700_100036483 | 405 |
| 74 | 3300028653 | Ga0265323_10017656 | Ga0265323_100176563 | 405 |
| 75 | 3300005434 | Ga0070709_10018303 | Ga0070709_100183034 | 406 |
| 76 | 3300005435 | Ga0070714_100034601 | Ga0070714_1000346014 | 406 |
| 77 | 3300005436 | Ga0070713_100001446 | Ga0070713_1000014463 | 406 |
| 78 | 3300005439 | Ga0070711_100000884 | Ga0070711_1000008843 | 406 |
| 79 | 3300006028 | Ga0070717_10069427 | Ga0070717_100694272 | 406 |
| 80 | 3300006175 | Ga0070712_100007552 | Ga0070712_1000075526 | 406 |
| 81 | 3300025905 | Ga0207685_10006699 | Ga0207685_100066992 | 406 |
| 82 | 3300025915 | Ga0207693_10002274 | Ga0207693_1000227417 | 406 |
| 83 | 3300025916 | Ga0207663_10000312 | Ga0207663_100003126 | 406 |
| 84 | 3300025928 | Ga0207700_10007117 | Ga0207700_100071173 | 406 |
| 85 | 3300025929 | Ga0207664_10111945 | Ga0207664_101119452 | 406 |
| 86 | 3300031344 | Ga0265316_10009521 | Ga0265316_100095218 | 406 |
| 87 | 3300031712 | Ga0265342_10101713 | Ga0265342_101017131 | 406 |
| 88 | 3300031852 | Ga0307410_10000036 | Ga0307410_1000003611 | 406 |
| 89 | 3300031995 | Ga0307409_100000294 | Ga0307409_10000029411 | 406 |
| 90 | 3300048903 | Ga0496100_0034965 | Ga0496100_0034965_1244_2497 | 406 |
| 91 | 3300048907 | Ga0496104_0036707 | Ga0496104_0036707_349_1602 | 406 |
| 92 | 3300048918 | Ga0496115_0096926 | Ga0496115_0096926_1054_2307 | 406 |
| 93 | 3300028563 | Ga0265319_1019304 | Ga0265319_10193041 | 407 |
| 94 | 3300028577 | Ga0265318_10003495 | Ga0265318_100034957 | 407 |
| 95 | 3300031240 | Ga0265320_10001500 | Ga0265320_100015007 | 407 |
| 96 | 3300031344 | Ga0265316_10066777 | Ga0265316_100667773 | 407 |
| 97 | 3300025922 | Ga0207646_10065964 | Ga0207646_100659642 | 409 |
| 98 | 3300005436 | Ga0070713_100007595 | Ga0070713_1000075951 | 411 |
| 99 | 3300031240 | Ga0265320_10000143 | Ga0265320_1000014323 | 411 |
| 100 | 3300005547 | Ga0070693_100019068 | Ga0070693_1000190682 | 412 |
| 101 | 3300009545 | Ga0105237_10187195 | Ga0105237_101871952 | 412 |
| 102 | 3300025914 | Ga0207671_10013138 | Ga0207671_100131384 | 412 |
| 103 | 3300044684 | Ga0466966_0001705 | Ga0466966_0001705_12221_13483 | 412 |
| 104 | 3300044693 | Ga0466961_0067863 | Ga0466961_0067863_669_1931 | 412 |
| 105 | 3300021361 | Ga0213872_10021331 | Ga0213872_100213311 | 413 |
| 106 | 3300021384 | Ga0213876_10002293 | Ga0213876_100022938 | 413 |
| 107 | 3300028563 | Ga0265319_1003266 | Ga0265319_10032667 | 413 |
| 108 | 3300039447 | Ga0436361_1077812 | Ga0436361_1077812_565_1827 | 413 |
| 109 | 3300039447 | Ga0436361_1148886 | Ga0436361_1148886_98_1360 | 413 |
| 110 | 3300049589 | Ga0501073_0041326 | Ga0501073_0041326_1262_2536 | 413 |
| 111 | 3300028653 | Ga0265323_10001177 | Ga0265323_100011775 | 414 |
| 112 | iso_pu_bacteria | 2786546517 | 2787436274 | 414 |
| 113 | 3300005344 | Ga0070661_100111889 | Ga0070661_1001118891 | 415 |
| 114 | 3300005548 | Ga0070665_100000201 | Ga0070665_10000020164 | 415 |
| 115 | 3300005841 | Ga0068863_100004239 | Ga0068863_10000423915 | 415 |
| 116 | 3300005842 | Ga0068858_100016590 | Ga0068858_1000165903 | 415 |
| 117 | 3300009093 | Ga0105240_10017693 | Ga0105240_100176939 | 415 |
| 118 | 3300009093 | Ga0105240_10155091 | Ga0105240_101550912 | 415 |
| 119 | 3300009545 | Ga0105237_10001781 | Ga0105237_1000178122 | 415 |
| 120 | 3300025913 | Ga0207695_10035290 | Ga0207695_100352905 | 415 |
| 121 | 3300025914 | Ga0207671_10005621 | Ga0207671_1000562110 | 415 |
| 122 | 3300026035 | Ga0207703_10007923 | Ga0207703_100079235 | 415 |
| 123 | 3300028379 | Ga0268266_10000197 | Ga0268266_1000019736 | 415 |
| 124 | 3300028556 | Ga0265337_1001663 | Ga0265337_10016636 | 415 |
| 125 | 3300028556 | Ga0265337_1006043 | Ga0265337_10060433 | 415 |
| 126 | 3300028563 | Ga0265319_1000772 | Ga0265319_100077220 | 415 |
| 127 | 3300028563 | Ga0265319_1025176 | Ga0265319_10251762 | 415 |
| 128 | 3300028577 | Ga0265318_10000500 | Ga0265318_1000050027 | 415 |
| 129 | 3300028654 | Ga0265322_10006284 | Ga0265322_100062842 | 415 |
| 130 | 3300028800 | Ga0265338_10002745 | Ga0265338_1000274514 | 415 |
| 131 | 3300030521 | Ga0307511_10000128 | Ga0307511_1000012825 | 415 |
| 132 | 3300031240 | Ga0265320_10000753 | Ga0265320_100007539 | 415 |
| 133 | 3300031240 | Ga0265320_10009344 | Ga0265320_100093443 | 415 |
| 134 | 3300031240 | Ga0265320_10069914 | Ga0265320_100699141 | 415 |
| 135 | 3300031250 | Ga0265331_10019608 | Ga0265331_100196082 | 415 |
| 136 | 3300031251 | Ga0265327_10009426 | Ga0265327_100094269 | 415 |
| 137 | 3300031344 | Ga0265316_10017768 | Ga0265316_100177687 | 415 |
| 138 | 3300031595 | Ga0265313_10004205 | Ga0265313_100042058 | 415 |
| 139 | 3300031595 | Ga0265313_10004355 | Ga0265313_100043553 | 415 |
| 140 | 3300031711 | Ga0265314_10003558 | Ga0265314_100035589 | 415 |
| 141 | 3300031712 | Ga0265342_10010088 | Ga0265342_100100882 | 415 |
| 142 | 3300037471 | Ga0395905_0000016 | Ga0395905_0000016_380899_382173 | 415 |
| 143 | 3300042876 | Ga0451577_0009452 | Ga0451577_0009452_5444_6712 | 415 |
| 144 | 3300044712 | Ga0453684_0000045 | Ga0453684_0000045_390447_391730 | 415 |
| 145 | 3300030760 | Ga0265762_1001841 | Ga0265762_10018413 | 416 |
| 146 | 3300000546 | LJNas_1002495 | LJNas_10024952 | 417 |
| 147 | 3300005434 | Ga0070709_10001176 | Ga0070709_100011767 | 417 |
| 148 | 3300005434 | Ga0070709_10152732 | Ga0070709_101527322 | 417 |
| 149 | 3300005435 | Ga0070714_100000054 | Ga0070714_10000005461 | 417 |
| 150 | 3300005435 | Ga0070714_100027172 | Ga0070714_1000271722 | 417 |
| 151 | 3300005436 | Ga0070713_100000498 | Ga0070713_10000049812 | 417 |
| 152 | 3300005436 | Ga0070713_100028240 | Ga0070713_1000282402 | 417 |
| 153 | 3300005437 | Ga0070710_10008212 | Ga0070710_100082125 | 417 |
| 154 | 3300005445 | Ga0070708_100000264 | Ga0070708_1000002649 | 417 |
| 155 | 3300005467 | Ga0070706_100003783 | Ga0070706_10000378312 | 417 |
| 156 | 3300005468 | Ga0070707_100002864 | Ga0070707_10000286410 | 417 |
| 157 | 3300005468 | Ga0070707_100041082 | Ga0070707_1000410824 | 417 |
| 158 | 3300005471 | Ga0070698_100003301 | Ga0070698_1000033015 | 417 |
| 159 | 3300005518 | Ga0070699_100000890 | Ga0070699_1000008904 | 417 |
| 160 | 3300005536 | Ga0070697_100006468 | Ga0070697_1000064683 | 417 |
| 161 | 3300006028 | Ga0070717_10001747 | Ga0070717_100017476 | 417 |
| 162 | 3300006028 | Ga0070717_10005527 | Ga0070717_100055275 | 417 |
| 163 | 3300006175 | Ga0070712_100002863 | Ga0070712_1000028637 | 417 |
| 164 | 3300006175 | Ga0070712_100163454 | Ga0070712_1001634542 | 417 |
| 165 | 3300025906 | Ga0207699_10000189 | Ga0207699_100001896 | 417 |
| 166 | 3300025910 | Ga0207684_10000831 | Ga0207684_1000083126 | 417 |
| 167 | 3300025915 | Ga0207693_10000210 | Ga0207693_1000021037 | 417 |
| 168 | 3300025916 | Ga0207663_10024440 | Ga0207663_100244402 | 417 |
| 169 | 3300025922 | Ga0207646_10000694 | Ga0207646_1000069410 | 417 |
| 170 | 3300025922 | Ga0207646_10025816 | Ga0207646_100258164 | 417 |
| 171 | 3300025928 | Ga0207700_10003215 | Ga0207700_100032157 | 417 |
| 172 | 3300025928 | Ga0207700_10006287 | Ga0207700_100062875 | 417 |
| 173 | 3300025929 | Ga0207664_10000166 | Ga0207664_100001663 | 417 |
| 174 | 3300031090 | Ga0265760_10001169 | Ga0265760_100011699 | 417 |
| 175 | 3300031241 | Ga0265325_10038330 | Ga0265325_100383302 | 417 |
| 176 | 3300031249 | Ga0265339_10057914 | Ga0265339_100579142 | 417 |
| 177 | 3300031344 | Ga0265316_10122667 | Ga0265316_101226672 | 417 |
| 178 | 3300031711 | Ga0265314_10072583 | Ga0265314_100725832 | 417 |
| 179 | 3300033547 | Ga0316212_1001241 | Ga0316212_10012412 | 417 |
| 180 | 3300035113 | Ga0373936_0033363 | Ga0373936_0033363_239_1492 | 417 |
| 181 | 3300035117 | Ga0373953_0037717 | Ga0373953_0037717_218_1471 | 417 |
| 182 | 3300035118 | Ga0373954_0011269 | Ga0373954_0011269_1161_2414 | 417 |
| 183 | 3300035119 | Ga0373956_0003855 | Ga0373956_0003855_176_1429 | 417 |
| 184 | 3300035170 | Ga0373943_0000013 | Ga0373943_0000013_59961_61214 | 417 |
| 185 | 3300035172 | Ga0373955_0020877 | Ga0373955_0020877_259_1512 | 417 |
| 186 | 3300035172 | Ga0373955_0108276 | Ga0373955_0108276_109_1362 | 417 |
| 187 | 3300035692 | Ga0373935_0022367 | Ga0373935_0022367_1661_2914 | 417 |
| 188 | 3300035695 | Ga0373927_0000478 | Ga0373927_0000478_6832_8085 | 417 |
| 189 | 3300035725 | Ga0373947_0003915 | Ga0373947_0003915_3656_4909 | 417 |
| 190 | 3300035725 | Ga0373947_0078307 | Ga0373947_0078307_228_1481 | 417 |
| 191 | 3300035725 | Ga0373947_0088509 | Ga0373947_0088509_230_1489 | 417 |
| 192 | 3300036401 | Ga0373937_0029343 | Ga0373937_0029343_1451_2704 | 417 |
| 193 | 3300037068 | Ga0373925_0002498 | Ga0373925_0002498_7252_8505 | 417 |
| 194 | 3300037068 | Ga0373925_0019878 | Ga0373925_0019878_2117_3370 | 417 |
| 195 | 3300037068 | Ga0373925_0033684 | Ga0373925_0033684_982_2235 | 417 |
| 196 | 3300046463 | Ga0495653_0072711 | Ga0495653_0072711_634_1887 | 417 |
| 197 | 3300046472 | Ga0495580_0002148 | Ga0495580_0002148_4811_6064 | 417 |
| 198 | 3300046472 | Ga0495580_0066740 | Ga0495580_0066740_350_1603 | 417 |
| 199 | 3300046473 | Ga0495582_0001982 | Ga0495582_0001982_4437_5690 | 417 |
| 200 | 3300046517 | Ga0495630_0031031 | Ga0495630_0031031_1663_2916 | 417 |
| 201 | 3300046679 | Ga0495623_0089134 | Ga0495623_0089134_245_1498 | 417 |
| 202 | 3300046684 | Ga0495669_0081111 | Ga0495669_0081111_153_1406 | 417 |
| 203 | 3300047319 | Ga0495674_0015167 | Ga0495674_0015167_3300_4553 | 417 |
| 204 | 3300047319 | Ga0495674_0169580 | Ga0495674_0169580_515_1768 | 417 |
| 205 | 3300048088 | Ga0495602_0090298 | Ga0495602_0090298_572_1825 | 417 |
| 206 | 3300053077 | Ga0495601_0031833 | Ga0495601_0031833_739_1992 | 417 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1o20-assembly1.cif.gz_A | crystal structure of gamma-glutamyl phosphate reductase (tm0293) from thermotoga maritima at 2.00 a resolution | 0.9142 | 11 | 413 |
| 1o20-assembly1.cif.gz_A | crystal structure of gamma-glutamyl phosphate reductase (tm0293) from thermotoga maritima at 2.00 a resolution | 0.8912 | 11 | 413 |
| 4ghk-assembly2.cif.gz_A | x-ray crystal structure of gamma-glutamyl phosphate reductase from burkholderia thailandensis | 0.8896 | 11 | 413 |
| 4ghk-assembly2.cif.gz_B | x-ray crystal structure of gamma-glutamyl phosphate reductase from burkholderia thailandensis | 0.8868 | 11 | 413 |
| 4ghk-assembly3.cif.gz_C | x-ray crystal structure of gamma-glutamyl phosphate reductase from burkholderia thailandensis | 0.8862 | 11 | 413 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WHV1_235_371_3.40.605.10 | Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 | 0.9875 | 225 | 375 | 3.40.605.10 |
| 1o20A02 | Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 | 0.9824 | 225 | 375 | 3.40.309.10 |
| af_P9WHV1_235_371_3.40.605.10 | Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 | 0.9804 | 225 | 375 | 3.40.605.10 |
| af_Q9UT44_226_381_3.40.605.10 | Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 | 0.9767 | 225 | 375 | 3.40.605.10 |
| 1o20A02 | Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 | 0.9759 | 225 | 375 | 3.40.309.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A355XSF2-F1-model_v4 | Gamma-glutamyl-phosphate reductase | 0.9825 | 26 | 148 |
GO:0004350
|
| AF-A0A455U8L6-F1-model_v4 | Aldehyde dehydrogenase domain-containing protein | 0.9777 | 12 | 177 |
GO:0004350
|
| AF-A0A753YDI2-F1-model_v4 | glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) | 0.9752 | 10 | 231 |
GO:0004350
GO:0055129 |
| AF-S7HMF0-F1-model_v4 | Gamma-glutamyl phosphate reductase (EC 1.2.1.41) | 0.9742 | 9 | 220 |
GO:0004350
|
| AF-A0A7X9F430-F1-model_v4 | Gamma-glutamyl-phosphate reductase | 0.9734 | 9 | 212 |
GO:0004350
|
Predicted Structure (AlphaFold2)
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