F314493

General Info

Members Datasets Scaffolds Average Seq Length
205 164 410 626

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2615840624|2616294523
Length 721
Sequence DSRIAARRHGIDFLRGSPIAEFPQVALLRSRHSRNTNFPYKSAQCPLLRRQGPVRRSAHLLLSFLCPGSGNPRDRWLLVVLLSSDEELNLNVSTLLFGRRLANREHEDKKIGWIEAVPAMGLDGLGSSSYGPEAALTILIPLGALGLFYIGPVMGCIITLLAILYFSYRQTLAAYPTSGGAYVVAKENLGEYPSLLAAAALMIDYVLNVAVGVSAGVGALVSAAPDLHPYILPLCLGIVLVVMLANLRGTGEAGWLFALPTYVFIVCFLGAIGYGLIEILMGERPSPVVPPPPLGPVAQGATIWLLMHAFASGCTAMTGVEAVSNGMGSFRQPVMRNAYITLTVIVVILGLLLGGIAAIATVFEIGAMDQTKEGYQSVLSQLIAAIAGHGSFYYIAMASLLSVLCLSANTSFVGFPRLCQMVAADGYLPKAFAQPGRRLVFTAGIIFLSGCAALLLTVFGGITDHLIPLFAIGAFLTFTISQAGMTVHWRRQSRRHAAKLTMNAVGAASTAVALVIILIAKFAEGAWITLITVPVTIVILKSIKNYYRSLQRELRKPGPITIEDVEPPTVLVVTETWNRLSERAIKFALTISPDVVAVHLIRLGGPERDERENALREEWRVEVEEPIAAHGLKPPRLMFIPAPYRQLHEPLLRLIEKLDADSPERRVAVLIPETVKDKWWQKLLHMNRAGRLRANLVKRGGARLTVATVPWRLYREEQEAV

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
17 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
18 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
19 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
20 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
21 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
22 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
23 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
24 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
25 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
26 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
37 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
38 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
41 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
45 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
46 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
47 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
53 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
54 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
55 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
58 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
59 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
65 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
68 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
69 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
70 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
71 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
72 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
73 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
74 2718217882 Rhizobium sp. N741 Isolate Nodule
75 2718217927 Rhizobium sp. N324 Isolate Nodule
76 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
77 2718218009 Rhizobium sp. N561 Isolate Nodule
78 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
79 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
80 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
81 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
82 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
83 2718218363 Rhizobium sp. N113 Isolate Nodule
84 2718218365 Rhizobium sp. N731 Isolate Nodule
85 2718218366 Rhizobium sp. N621 Isolate Nodule
86 2718218423 Rhizobium sp. N941 Isolate Nodule
87 2721755514 Rhizobium sp. N6212 Isolate Nodule
88 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
89 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
90 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
91 2721755809 Rhizobium sp. N541 Isolate Nodule
92 2721755810 Rhizobium sp. N871 Isolate Nodule
93 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
94 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
95 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
96 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
97 2728369365 Rhizobium sp. N1341 Isolate Nodule
98 2728369397 Rhizobium sp. N1314 Isolate Nodule
99 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
100 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
101 2791355260 Rhizobium sp. L9 Isolate Nodule
102 2791355264 Rhizobium sp. S9 Isolate Nodule
103 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
104 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
105 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
106 2838048938 Rhizobium pisi 27/80 Isolate Nodule
107 2838061910 Rhizobium phaseoli L15 Isolate Nodule
108 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
109 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
110 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
111 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
112 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
113 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
114 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
115 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
116 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
117 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
118 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
119 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
120 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
121 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
122 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
123 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
124 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
125 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
126 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
127 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
128 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
129 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
130 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
131 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
132 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
133 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
134 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
135 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
136 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
137 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
138 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
139 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
140 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
141 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
142 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
143 2933599457 Rhizobium phaseoli M3 Isolate Nodule
144 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
145 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
146 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
147 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
148 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
149 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
150 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
151 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
152 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
153 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
154 8005275841 Rhizobium sp. N4311 Isolate Nodule
155 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
156 8005382845 Rhizobium sp. R634 Isolate Nodule
157 8005395548 Rhizobium sp. R339 Isolate Nodule
158 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
159 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
160 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
161 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
162 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
163 8018176218 Rhizobium sp. N122 Isolate Nodule
164 8024501048 Rhizobium sp. H4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 54.15
Metatranscriptomes 0
Isolates 45.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.98
Nodule 44.39
Rhizoplane 4.39
Rhizosphere 38.05
Stem 0
Stem Tuber 0
Unclassified 1.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10009164 3300003320 Bacteria 9122
2 rootH2_10093747 3300003320 Bacteria 7217
3 Ga0070658_10000320 3300005327 Bacteria 41089
4 Ga0070658_10034336 3300005327 Bacteria 4081
5 Ga0070683_100131038 3300005329 Bacteria 2373
6 Ga0070671_100056742 3300005355 Bacteria 3258
7 Ga0070710_10022296 3300005437 Bacteria 3310
8 Ga0070679_100058429 3300005530 Bacteria 3843
9 Ga0070679_100072053 3300005530 Bacteria 3447
10 Ga0068853_100008544 3300005539 Bacteria 8229
11 Ga0070665_100000770 3300005548 Bacteria 42271
12 Ga0068855_100002971 3300005563 Bacteria 20719
13 Ga0068855_100005586 3300005563 Bacteria 15344
14 Ga0068855_100050889 3300005563 Bacteria 4880
15 Ga0070664_100007930 3300005564 Bacteria 8577
16 Ga0068856_100022004 3300005614 Bacteria 6199
17 Ga0105240_10021514 3300009093 Bacteria 8577
18 Ga0114129_10238247 3300009147 Bacteria 2447
19 Ga0105237_10000881 3300009545 Bacteria 40599
20 Ga0105238_10001270 3300009551 Bacteria 25380
21 Ga0105238_10008926 3300009551 Bacteria 10033
22 Ga0105238_10032289 3300009551 Bacteria 5327
23 Ga0123341_1000010 3300009765 Bacteria 118450
24 Ga0157369_10016680 3300013105 Bacteria 8256
25 Ga0157378_10100798 3300013297 Unclassified 2637
26 Ga0157372_10023289 3300013307 Bacteria 6712
27 Ga0163163_10003426 3300014325 Bacteria 13479
28 Ga0182007_10001408 3300015262 Bacteria 12939
29 Ga0183362_10002 3300015683 Bacteria 1432711
30 Ga0213876_10000315 3300021384 Bacteria 42554
31 Ga0213876_10002071 3300021384 Bacteria 11885
32 Ga0213876_10002159 3300021384 Bacteria 11633
33 Ga0213876_10003204 3300021384 Bacteria 9399
34 Ga0213875_10001692 3300021388 Bacteria 13879
35 Ga0213875_10004612 3300021388 Bacteria 7517
36 Ga0213875_10014240 3300021388 Unclassified 3884
37 Ga0213875_10015562 3300021388 Bacteria 3699
38 Ga0209758_1003453 3300025297 Bacteria 14335
39 Ga0207705_10002877 3300025909 Bacteria 13169
40 Ga0207705_10018925 3300025909 Bacteria 4924
41 Ga0207671_10001403 3300025914 Bacteria 28043
42 Ga0207693_10005348 3300025915 Bacteria 10728
43 Ga0207657_10001296 3300025919 Bacteria 26557
44 Ga0207652_10049757 3300025921 Bacteria 3589
45 Ga0207694_10038352 3300025924 Bacteria 3684
46 Ga0207665_10020101 3300025939 Bacteria 4385
47 Ga0207661_10116230 3300025944 Bacteria 2271
48 Ga0207667_10002192 3300025949 Bacteria 24516
49 Ga0207667_10002716 3300025949 Bacteria 21879
50 Ga0268266_10003144 3300028379 Bacteria 16769
51 Ga0373947_0027018 3300035725 Bacteria 3358
52 Ga0395899_0001252 3300037312 Bacteria 22072
53 Ga0395900_0044325 3300037418 Bacteria 4584
54 Ga0395898_0001253 3300037466 Bacteria 37794
55 Ga0395898_0092316 3300037466 Bacteria 2911
56 Ga0395905_0002180 3300037471 Bacteria 22137
57 Ga0395905_0003994 3300037471 Bacteria 15499
58 Ga0395905_0050739 3300037471 Bacteria 3886
59 Ga0395905_0072951 3300037471 Bacteria 3218
60 Ga0436364_0467758 3300037853 Bacteria 119174
61 Ga0436364_0558108 3300037853 Bacteria 39499
62 Ga0436364_0714160 3300037853 Bacteria 6208
63 Ga0436364_1028327 3300037853 Bacteria 1947
64 Ga0436364_1326072 3300037853 Bacteria 4873
65 Ga0395901_0000682 3300038443 Bacteria 38923
66 Ga0395901_0172373 3300038443 Bacteria 2270
67 Ga0436365_0019296 3300039437 Bacteria 15749
68 Ga0436365_1215804 3300039437 Unclassified 3102
69 Ga0436365_1332443 3300039437 Bacteria 50115
70 Ga0436361_0500158 3300039447 Bacteria 10867
71 Ga0436361_0590784 3300039447 Bacteria 9840
72 Ga0436363_0136493 3300039450 Bacteria 6866
73 Ga0436363_0478306 3300039450 Bacteria 8045
74 Ga0436363_0660718 3300039450 Bacteria 4438
75 Ga0436362_0525706 3300039453 Bacteria 6272
76 Ga0466969_0002474 3300044656 Bacteria 9865
77 Ga0466969_0002822 3300044656 Bacteria 9287
78 Ga0466972_0008590 3300044658 Bacteria 5125
79 Ga0466966_0000285 3300044684 Bacteria 33126
80 Ga0466966_0019033 3300044684 Bacteria 4525
81 Ga0466961_0003796 3300044693 Bacteria 9447
82 Ga0466961_0012350 3300044693 Bacteria 5461
83 Ga0466963_0013347 3300044694 Bacteria 5044
84 Ga0466964_0030552 3300044706 Bacteria 2133
85 Ga0466971_0003298 3300044719 Bacteria 6892
86 Ga0466970_0000386 3300044765 Bacteria 21345
87 Ga0466970_0001080 3300044765 Bacteria 13202
88 Ga0466970_0003711 3300044765 Bacteria 7463
89 Ga0466957_0004799 3300044842 Bacteria 7569
90 Ga0466959_0000935 3300045049 Bacteria 17325
91 Ga0466959_0004383 3300045049 Bacteria 9441
92 Ga0466959_0006848 3300045049 Bacteria 7944
93 Ga0466959_0074686 3300045049 Bacteria 2451
94 Ga0495632_0013877 3300046519 Bacteria 4579
95 Ga0496101_0020962 3300048904 Bacteria 4485
96 Ga0496104_0009773 3300048907 Bacteria 8554
97 Ga0496108_0000702 3300048911 Bacteria 25959
98 Ga0496108_0018560 3300048911 Bacteria 5697
99 Ga0496109_0031461 3300048912 Bacteria 4761
100 Ga0496109_0082324 3300048912 Bacteria 2966
101 Ga0496110_0007454 3300048913 Bacteria 8741
102 Ga0496112_0020709 3300048915 Bacteria 6238
103 Ga0496113_0016509 3300048916 Bacteria 5102
104 Ga0501036_0058403 3300049572 Bacteria 3268
105 Ga0501043_0081100 3300049579 Bacteria 2549
106 Ga0501070_0045524 3300049586 Bacteria 3649
107 Ga0501070_0064099 3300049586 Bacteria 3044
108 Ga0501080_0060667 3300049742 Bacteria 3521
109 Ga0501044_0071223 3300049823 Bacteria 3535
110 Ga0500609_000375 3300053731 Bacteria 6640
111 Ga0466962_0001825 3300061719 Bacteria 10017
112 2616294523 2615840624 Bacteria 6557588
113 2513671258 2513237098 Bacteria 9902361
114 2719184554 2718217882 Bacteria 6556348
115 2719388790 2718217927 Bacteria 6972593
116 2719668590 2718217997 Bacteria 6740740
117 2719728574 2718218009 Bacteria 6478651
118 2720489283 2718218199 Bacteria 6740745
119 2720609964 2718218232 Bacteria 6720332
120 2720617388 2718218233 Bacteria 6662049
121 2720628534 2718218235 Bacteria 6630699
122 2720772484 2718218269 Bacteria 6906114
123 2721144265 2718218363 Bacteria 6524337
124 2721161060 2718218365 Bacteria 6274507
125 2721161635 2718218366 Bacteria 6425255
126 2721402511 2718218423 Bacteria 6438183
127 2722842780 2721755514 Bacteria 6424414
128 2723029919 2721755556 Bacteria 6745503
129 2723564329 2721755684 Bacteria 6859907
130 2723570031 2721755685 Bacteria 6704835
131 2724034577 2721755809 Bacteria 6438790
132 2724041599 2721755810 Bacteria 6479005
133 2724092513 2721755819 Bacteria 6906405
134 2724101578 2721755822 Bacteria 6726041
135 2724112889 2721755823 Bacteria 6752556
136 2730110452 2728369352 Bacteria 6745171
137 2730160669 2728369365 Bacteria 6555560
138 2730301168 2728369397 Bacteria 6274511
139 2792640628 2791355094 Bacteria 7011481
140 2793317102 2791355259 Bacteria 7254731
141 2793322624 2791355260 Bacteria 6598818
142 2793345443 2791355264 Bacteria 6429314
143 2805928648 2802429605 Bacteria 6875453
144 2838016205 2838016132 Bacteria 6577831
145 2838024662 2838022645 Bacteria 6494267
146 2838049706 2838048938 Bacteria 6044578
147 2838061973 2838061910 Bacteria 6794874
148 2838068737 2838068647 Bacteria 6208656
149 2838668800 2838668709 Bacteria 6671819
150 2838701540 2838701080 Bacteria 6669771
151 2842146395 2842146304 Bacteria 5957337
152 2842198355 2842192696 Bacteria 6147454
153 2842200232 2842198810 Bacteria 6608673
154 2842251375 2842250916 Bacteria 6579627
155 2842265074 2842264693 Bacteria 6472963
156 2842288213 2842285085 Bacteria 6011953
157 2842315693 2842311132 Bacteria 6616990
158 2842319622 2842317721 Bacteria 6793725
159 2842405479 2842402390 Bacteria 6681310
160 2842411764 2842409023 Bacteria 6687331
161 2842418709 2842415677 Bacteria 6596907
162 2842422883 2842422224 Bacteria 6239196
163 2842428872 2842428310 Bacteria 6767288
164 2842435485 2842434925 Bacteria 6502746
165 2842441652 2842441272 Bacteria 6769273
166 2842448306 2842447887 Bacteria 6754142
167 2842463296 2842462802 Bacteria 6588055
168 2842469816 2842469257 Bacteria 6752936
169 2842490495 2842489311 Bacteria 6620893
170 2842501526 2842495871 Bacteria 6820686
171 2856367798 2856364286 Bacteria 6939991
172 2857352071 2857349434 Bacteria 7926032
173 2869290573 2869285874 Bacteria 6901219
174 2871432857 2871429161 Bacteria 6547891
175 2874152837 2874146452 Bacteria 7533118
176 2874160224 2874155637 Bacteria 6724144
177 2876418750 2876413966 Bacteria 6831344
178 2878750471 2878745973 Bacteria 6867388
179 2903502229 2903492973 Bacteria 13473544
180 2903768672 2903768456 Bacteria 9749579
181 2906312830 2906308376 Bacteria 6841989
182 2906325537 2906321335 Bacteria 6579571
183 2933600355 2933599457 Bacteria 5858799
184 2937819027 2937813078 Bacteria 7783518
185 2958134960 2958130278 Bacteria 6897202
186 2958186260 2958179912 Bacteria 6874908
187 2961084759 2961077736 Bacteria 7079850
188 2977848617 2977843712 Bacteria 6753583
189 2977945029 2977942078 Bacteria 7570577
190 2987639255 2987636660 Bacteria 8088555
191 3004204501 3004203850 Bacteria 7307914
192 8004392779 8004387939 Bacteria 7049250
193 8004719087 8004714634 Bacteria 6776161
194 8005276201 8005275841 Bacteria 6929066
195 8005288579 8005282627 Bacteria 6675747
196 8005386746 8005382845 Bacteria 6732062
197 8005387012 8005382845 Bacteria 6732062
198 8005401724 8005395548 Bacteria 6806915
199 8005431499 8005430974 Bacteria 6689030
200 8005502840 8005497431 Bacteria 6477605
201 8005623988 8005619151 Bacteria 7030230
202 8005629253 8005626139 Bacteria 6534237
203 8005674270 8005668836 Bacteria 6953162
204 8018179358 8018176218 Bacteria 6896178
205 8024501953 8024501048 Bacteria 6427847
206 rootH2_10009164
207 rootH2_10093747
208 Ga0070658_10000320
209 Ga0070658_10034336
210 Ga0070683_100131038
211 Ga0070671_100056742
212 Ga0070710_10022296
213 Ga0070679_100058429
214 Ga0070679_100072053
215 Ga0068853_100008544
216 Ga0070665_100000770
217 Ga0068855_100002971
218 Ga0068855_100005586
219 Ga0068855_100050889
220 Ga0070664_100007930
221 Ga0068856_100022004
222 Ga0105240_10021514
223 Ga0114129_10238247
224 Ga0105237_10000881
225 Ga0105238_10001270
226 Ga0105238_10008926
227 Ga0105238_10032289
228 Ga0123341_1000010
229 Ga0157369_10016680
230 Ga0157378_10100798
231 Ga0157372_10023289
232 Ga0163163_10003426
233 Ga0182007_10001408
234 Ga0183362_10002
235 Ga0213876_10000315
236 Ga0213876_10002071
237 Ga0213876_10002159
238 Ga0213876_10003204
239 Ga0213875_10001692
240 Ga0213875_10004612
241 Ga0213875_10014240
242 Ga0213875_10015562
243 Ga0209758_1003453
244 Ga0207705_10002877
245 Ga0207705_10018925
246 Ga0207671_10001403
247 Ga0207693_10005348
248 Ga0207657_10001296
249 Ga0207652_10049757
250 Ga0207694_10038352
251 Ga0207665_10020101
252 Ga0207661_10116230
253 Ga0207667_10002192
254 Ga0207667_10002716
255 Ga0268266_10003144
256 Ga0373947_0027018
257 Ga0395899_0001252
258 Ga0395900_0044325
259 Ga0395898_0001253
260 Ga0395898_0092316
261 Ga0395905_0002180
262 Ga0395905_0003994
263 Ga0395905_0050739
264 Ga0395905_0072951
265 Ga0436364_0467758
266 Ga0436364_0558108
267 Ga0436364_0714160
268 Ga0436364_1028327
269 Ga0436364_1326072
270 Ga0395901_0000682
271 Ga0395901_0172373
272 Ga0436365_0019296
273 Ga0436365_1215804
274 Ga0436365_1332443
275 Ga0436361_0500158
276 Ga0436361_0590784
277 Ga0436363_0136493
278 Ga0436363_0478306
279 Ga0436363_0660718
280 Ga0436362_0525706
281 Ga0466969_0002474
282 Ga0466969_0002822
283 Ga0466972_0008590
284 Ga0466966_0000285
285 Ga0466966_0019033
286 Ga0466961_0003796
287 Ga0466961_0012350
288 Ga0466963_0013347
289 Ga0466964_0030552
290 Ga0466971_0003298
291 Ga0466970_0000386
292 Ga0466970_0001080
293 Ga0466970_0003711
294 Ga0466957_0004799
295 Ga0466959_0000935
296 Ga0466959_0004383
297 Ga0466959_0006848
298 Ga0466959_0074686
299 Ga0495632_0013877
300 Ga0496101_0020962
301 Ga0496104_0009773
302 Ga0496108_0000702
303 Ga0496108_0018560
304 Ga0496109_0031461
305 Ga0496109_0082324
306 Ga0496110_0007454
307 Ga0496112_0020709
308 Ga0496113_0016509
309 Ga0501036_0058403
310 Ga0501043_0081100
311 Ga0501070_0045524
312 Ga0501070_0064099
313 Ga0501080_0060667
314 Ga0501044_0071223
315 Ga0500609_000375
316 Ga0466962_0001825
317 2616294523
318 2513671258
319 2719184554
320 2719388790
321 2719668590
322 2719728574
323 2720489283
324 2720609964
325 2720617388
326 2720628534
327 2720772484
328 2721144265
329 2721161060
330 2721161635
331 2721402511
332 2722842780
333 2723029919
334 2723564329
335 2723570031
336 2724034577
337 2724041599
338 2724092513
339 2724101578
340 2724112889
341 2730110452
342 2730160669
343 2730301168
344 2792640628
345 2793317102
346 2793322624
347 2793345443
348 2805928648
349 2838016205
350 2838024662
351 2838049706
352 2838061973
353 2838068737
354 2838668800
355 2838701540
356 2842146395
357 2842198355
358 2842200232
359 2842251375
360 2842265074
361 2842288213
362 2842315693
363 2842319622
364 2842405479
365 2842411764
366 2842418709
367 2842422883
368 2842428872
369 2842435485
370 2842441652
371 2842448306
372 2842463296
373 2842469816
374 2842490495
375 2842501526
376 2856367798
377 2857352071
378 2869290573
379 2871432857
380 2874152837
381 2874160224
382 2876418750
383 2878750471
384 2903502229
385 2903768672
386 2906312830
387 2906325537
388 2933600355
389 2937819027
390 2958134960
391 2958186260
392 2961084759
393 2977848617
394 2977945029
395 2987639255
396 3004204501
397 8004392779
398 8004719087
399 8005276201
400 8005288579
401 8005386746
402 8005387012
403 8005401724
404 8005431499
405 8005502840
406 8005623988
407 8005629253
408 8005674270
409 8018179358
410 8024501953

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

127

540

0.8

PF02705

K_trans

K+ potassium transporter integral membrane domain

155

565

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b71-assembly1.cif.gz_B upright kima dimer with bound c-di-amp from b. subtilis 0.814 29 585
8b71-assembly1.cif.gz_B upright kima dimer with bound c-di-amp from b. subtilis 0.8086 29 585
8b70-assembly1.cif.gz_A kima from b. subtilis with nucleotide second-messenger c-di-amp bound 0.7666 21 585
8b70-assembly1.cif.gz_A kima from b. subtilis with nucleotide second-messenger c-di-amp bound 0.757 21 585
6s3k-assembly1.cif.gz_B kima from bacillus subtilis in inward-facing, occluded state 0.7463 28 585
ID Description Score Start End Superfamily
af_Q2FVH8_33_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8446 32 439 1.20.1740.10
af_I6Y1H7_43_499_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.844 39 432 1.20.1740.10
af_Q2FVH8_33_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7936 32 439 1.20.1740.10
af_I6Y1H7_43_499_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7329 39 432 1.20.1740.10
af_Q86I87_92_535_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7326 22 433 1.20.1740.10
ID Description Score Start End GO Terms
AF-T0PRI9-F1-model_v4 Amino acid permease/ SLC12A domain-containing protein 0.9162 232 431 GO:0016020
GO:0022857
AF-A0A4V3ANP5-F1-model_v4 APC family permease 0.9158 32 586 GO:0016020
GO:0022857
AF-A0A4Q9WM70-F1-model_v4 deleted 0.9097 178 432
AF-A0A532BZZ3-F1-model_v4 Amino acid permease 0.9065 100 587 GO:0016020
GO:0022857
AF-A0A447SVZ4-F1-model_v4 deleted 0.9056 490 585

Map