F314309

General Info

Members Datasets Scaffolds Average Seq Length
205 118 410 397

Family's Representative Sequence

Representative Sequence 3300047317|Ga0495604_0062178|Ga0495604_0062178_227_1414
Length 395
Sequence VTFEGRRLWLAGIGGAGMSAYALLARGWGAEVSGWDRAETPYLAPLRAAGIDVVVAPDPPEPPAGAERYVSSAYKGVEGRPRADLLAELVSRGNSIVVAGAHGKTTTTAMIAFCLDRLGLDPAFVVGGEVPQLGANAHAGGGPLVVEGDESDRSVAALRPQVAVLLNVDLDHHTEFASKAEVEQLFEDWLAHVPEVVRGEELAPVALELAVPGEHNRRNAAAALAALERIGVDRAAAERAIVEFTGVGRRFERTGEAGGVTVVDDYGHNPAKVAAAIAAARSVAGEGRVLVLFQPHLFSRTRHLAHEFAVSLATADAVAVTAIYPAREEPLPGVTGKLVVDALAERRPGMTIGWTPRIEGGVELLARLARPGDVVLTLGAGDVDRAGPLLLAALR

Samples

Sample ID Description Type Environment
1 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
27 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
43 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
44 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
47 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
48 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
49 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
52 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
55 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
58 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
59 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
60 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
66 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
67 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
68 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
69 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
70 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
71 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
72 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
89 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
90 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
91 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
94 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
99 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
109 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
115 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
116 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
118 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.29
Rhizosphere 90.73
Stem 0
Stem Tuber 0
Unclassified 4.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495604_0062178 3300047317 Bacteria 2854
2 rootH2_10182402 3300003320 Bacteria 1695
3 Ga0070683_100005601 3300005329 Bacteria 10492
4 Ga0070683_100207674 3300005329 Bacteria 1860
5 Ga0070680_100085484 3300005336 Bacteria 2606
6 Ga0070660_100004360 3300005339 Bacteria 9770
7 Ga0070660_100009459 3300005339 Bacteria 6855
8 Ga0070659_100020944 3300005366 Bacteria 4973
9 Ga0070709_10000015 3300005434 Bacteria 145128
10 Ga0070714_100006143 3300005435 Bacteria 9233
11 Ga0070714_100310301 3300005435 Bacteria 1472
12 Ga0070710_10002060 3300005437 Bacteria 9524
13 Ga0070711_100017176 3300005439 Bacteria 4604
14 Ga0070711_100047300 3300005439 Bacteria 2936
15 Ga0070681_10079177 3300005458 Bacteria 3243
16 Ga0070698_100024269 3300005471 Bacteria 6327
17 Ga0070698_100037017 3300005471 Bacteria 5033
18 Ga0070698_100059981 3300005471 Bacteria 3840
19 Ga0070699_100157241 3300005518 Bacteria 2011
20 Ga0070679_100115012 3300005530 Bacteria 2676
21 Ga0070679_100276504 3300005530 Bacteria 1632
22 Ga0068855_100222139 3300005563 Bacteria 2118
23 Ga0070664_100078410 3300005564 Unclassified 2842
24 Ga0068852_100083230 3300005616 Bacteria 2845
25 Ga0081539_10002673 3300005985 Bacteria 24252
26 Ga0070717_10042061 3300006028 Bacteria 3727
27 Ga0070717_10106225 3300006028 Bacteria 2390
28 Ga0070712_100013972 3300006175 Bacteria 5144
29 Ga0075434_100057870 3300006871 Bacteria 3852
30 Ga0105237_10111807 3300009545 Bacteria 2724
31 Ga0105238_10460506 3300009551 Bacteria 1269
32 Ga0157369_10031848 3300013105 Bacteria 5803
33 Ga0157369_10097414 3300013105 Bacteria 3138
34 Ga0157372_10009736 3300013307 Bacteria 10221
35 Ga0157372_10278062 3300013307 Bacteria 1946
36 Ga0213871_10001997 3300021441 Bacteria 3637
37 Ga0207699_10000011 3300025906 Bacteria 282783
38 Ga0207699_10079731 3300025906 Bacteria 2026
39 Ga0207707_10079039 3300025912 Bacteria 2872
40 Ga0207707_10124087 3300025912 Bacteria 2258
41 Ga0207695_10025260 3300025913 Bacteria 6656
42 Ga0207671_10015967 3300025914 Bacteria 5853
43 Ga0207660_10022198 3300025917 Bacteria 4275
44 Ga0207660_10212927 3300025917 Bacteria 1514
45 Ga0207657_10007859 3300025919 Bacteria 10887
46 Ga0207657_10013130 3300025919 Bacteria 8135
47 Ga0207657_10073487 3300025919 Bacteria 2889
48 Ga0207652_10021551 3300025921 Bacteria 5318
49 Ga0207646_10002005 3300025922 Bacteria 24487
50 Ga0207646_10039067 3300025922 Bacteria 4270
51 Ga0207700_10011302 3300025928 Bacteria 5686
52 Ga0207700_10198272 3300025928 Bacteria 1690
53 Ga0207700_10214640 3300025928 Bacteria 1628
54 Ga0207664_10016884 3300025929 Bacteria 5337
55 Ga0207664_10026497 3300025929 Bacteria 4383
56 Ga0207664_10042305 3300025929 Bacteria 3555
57 Ga0207664_10140089 3300025929 Bacteria 2045
58 Ga0207690_10227859 3300025932 Unclassified 1429
59 Ga0207665_10071684 3300025939 Bacteria 2365
60 Ga0207651_10189648 3300025960 Unclassified 1639
61 Ga0207698_10282749 3300026142 Bacteria 1535
62 Ga0209971_1004643 3300027682 Bacteria 3259
63 Ga0265334_10001942 3300028573 Bacteria 9809
64 Ga0265334_10009260 3300028573 Bacteria 4167
65 Ga0265318_10000858 3300028577 Bacteria 20003
66 Ga0265336_10052635 3300028666 Bacteria 1228
67 Ga0265338_10015327 3300028800 Bacteria 8432
68 Ga0265338_10027910 3300028800 Bacteria 5648
69 Ga0265330_10000745 3300031235 Bacteria 20548
70 Ga0265330_10046906 3300031235 Bacteria 1903
71 Ga0265332_10002053 3300031238 Bacteria 10530
72 Ga0265328_10005531 3300031239 Bacteria 5408
73 Ga0265320_10004743 3300031240 Bacteria 8855
74 Ga0265320_10087228 3300031240 Bacteria 1449
75 Ga0265325_10000817 3300031241 Bacteria 22571
76 Ga0265329_10001779 3300031242 Bacteria 10249
77 Ga0265329_10046436 3300031242 Bacteria 1388
78 Ga0265340_10002260 3300031247 Bacteria 11009
79 Ga0265340_10030938 3300031247 Bacteria 2680
80 Ga0265339_10042009 3300031249 Bacteria 2533
81 Ga0265316_10005490 3300031344 Bacteria 12307
82 Ga0265316_10018062 3300031344 Bacteria 6075
83 Ga0265313_10004403 3300031595 Bacteria 10859
84 Ga0265313_10019070 3300031595 Bacteria 3833
85 Ga0307508_10041777 3300031616 Bacteria 4114
86 Ga0265314_10011053 3300031711 Bacteria 7483
87 Ga0265314_10070539 3300031711 Bacteria 2340
88 Ga0265342_10082206 3300031712 Bacteria 1858
89 Ga0373929_0000009 3300035085 Bacteria 202242
90 Ga0373961_0001018 3300035241 Bacteria 9177
91 Ga0373935_0006054 3300035692 Bacteria 7188
92 Ga0395899_0030202 3300037312 Bacteria 4076
93 Ga0395900_0107009 3300037418 Bacteria 2873
94 Ga0395898_0191812 3300037466 Bacteria 1952
95 Ga0395901_0132911 3300038443 Bacteria 2615
96 Ga0436360_0109347 3300039438 Bacteria 6308
97 Ga0466969_0025646 3300044656 Bacteria 3029
98 Ga0466966_0077684 3300044684 Bacteria 2071
99 Ga0466961_0031741 3300044693 Bacteria 3396
100 Ga0466963_0000052 3300044694 Bacteria 39227
101 Ga0466963_0012620 3300044694 Bacteria 5174
102 Ga0466963_0014296 3300044694 Bacteria 4891
103 Ga0466963_0018169 3300044694 Bacteria 4393
104 Ga0466963_0024500 3300044694 Bacteria 3843
105 Ga0466963_0026013 3300044694 Bacteria 3739
106 Ga0466963_0037120 3300044694 Unclassified 3180
107 Ga0466963_0050882 3300044694 Bacteria 2743
108 Ga0466963_0071867 3300044694 Unclassified 2329
109 Ga0466963_0075802 3300044694 Bacteria 2270
110 Ga0466963_0190545 3300044694 Bacteria 1432
111 Ga0466963_0190798 3300044694 Bacteria 1431
112 Ga0466964_0002111 3300044706 Bacteria 7001
113 Ga0466964_0005847 3300044706 Bacteria 4577
114 Ga0466964_0008160 3300044706 Bacteria 3930
115 Ga0466964_0024673 3300044706 Bacteria 2344
116 Ga0466964_0030261 3300044706 Bacteria 2141
117 Ga0466971_0071268 3300044719 Bacteria 1578
118 Ga0466971_0112356 3300044719 Bacteria 1258
119 Ga0466957_0008989 3300044842 Bacteria 5695
120 Ga0466957_0009069 3300044842 Bacteria 5672
121 Ga0466957_0013913 3300044842 Bacteria 4678
122 Ga0466957_0014906 3300044842 Bacteria 4534
123 Ga0466957_0027542 3300044842 Bacteria 3378
124 Ga0466959_0006509 3300045049 Bacteria 8097
125 Ga0466959_0019820 3300045049 Bacteria 4949
126 Ga0466958_0001783 3300045836 Bacteria 10439
127 Ga0466958_0002308 3300045836 Bacteria 9512
128 Ga0466958_0002682 3300045836 Bacteria 9015
129 Ga0466958_0005159 3300045836 Bacteria 6987
130 Ga0466958_0006542 3300045836 Bacteria 6349
131 Ga0466958_0013925 3300045836 Bacteria 4586
132 Ga0466958_0016398 3300045836 Bacteria 4265
133 Ga0466967_0000188 3300045976 Bacteria 25673
134 Ga0466967_0001998 3300045976 Bacteria 12401
135 Ga0466967_0005230 3300045976 Bacteria 8941
136 Ga0466967_0008382 3300045976 Bacteria 7566
137 Ga0466967_0020027 3300045976 Bacteria 5396
138 Ga0466967_0026770 3300045976 Bacteria 4784
139 Ga0466967_0034735 3300045976 Bacteria 4283
140 Ga0466967_0039780 3300045976 Bacteria 4045
141 Ga0466967_0044121 3300045976 Bacteria 3865
142 Ga0466967_0084357 3300045976 Bacteria 2874
143 Ga0466967_0084663 3300045976 Bacteria 2869
144 Ga0466967_0087251 3300045976 Bacteria 2828
145 Ga0466967_0177946 3300045976 Bacteria 2004
146 Ga0466967_0366648 3300045976 Bacteria 1396
147 Ga0466967_0386441 3300045976 Bacteria 1360
148 Ga0495592_0143265 3300046454 Bacteria 1660
149 Ga0495629_0052896 3300046459 Bacteria 2842
150 Ga0495629_0155768 3300046459 Bacteria 1587
151 Ga0495641_0013010 3300046461 Bacteria 4607
152 Ga0495641_0036789 3300046461 Bacteria 2298
153 Ga0495641_0074256 3300046461 Bacteria 1525
154 Ga0495582_0012880 3300046473 Bacteria 4608
155 Ga0495582_0019702 3300046473 Bacteria 3689
156 Ga0495662_0035949 3300046476 Bacteria 2391
157 Ga0495607_0010011 3300046501 Bacteria 6388
158 Ga0495608_0036055 3300046511 Bacteria 3331
159 Ga0495618_0091369 3300046514 Bacteria 1946
160 Ga0495630_0009431 3300046517 Bacteria 7017
161 Ga0495640_0026569 3300046533 Bacteria 4180
162 Ga0495609_0054582 3300046538 Bacteria 1774
163 Ga0495656_0003504 3300046615 Bacteria 5308
164 Ga0495635_0066076 3300046663 Bacteria 2481
165 Ga0495647_0004598 3300046681 Bacteria 4497
166 Ga0495658_0120938 3300046683 Bacteria 1584
167 Ga0495613_0024852 3300046689 Bacteria 4464
168 Ga0495624_0008405 3300046690 Bacteria 7198
169 Ga0495589_0046210 3300046794 Bacteria 2162
170 Ga0495674_0007243 3300047319 Bacteria 10617
171 Ga0495674_0057517 3300047319 Bacteria 3403
172 Ga0495674_0106393 3300047319 Bacteria 2383
173 Ga0495676_0017848 3300047321 Bacteria 6264
174 Ga0495680_0042691 3300047322 Bacteria 3596
175 Ga0495677_0020739 3300047445 Bacteria 2382
176 Ga0495684_0043989 3300047471 Bacteria 3419
177 Ga0496100_0081147 3300048903 Unclassified 2191
178 Ga0496104_0037763 3300048907 Bacteria 4515
179 Ga0496104_0067772 3300048907 Bacteria 3391
180 Ga0496104_0174897 3300048907 Bacteria 2057
181 Ga0496105_0002747 3300048908 Bacteria 12843
182 Ga0496108_0047306 3300048911 Unclassified 3596
183 Ga0496108_0077809 3300048911 Bacteria 2806
184 Ga0496109_0029950 3300048912 Bacteria 4878
185 Ga0496109_0174121 3300048912 Bacteria 2020
186 Ga0496111_0045744 3300048914 Bacteria 3150
187 Ga0496111_0240462 3300048914 Unclassified 1345
188 Ga0496112_0015247 3300048915 Bacteria 7165
189 Ga0496112_0047223 3300048915 Bacteria 4224
190 Ga0496112_0189876 3300048915 Bacteria 2017
191 Ga0496112_0352567 3300048915 Unclassified 1414
192 Ga0496114_0000031 3300048917 Bacteria 168230
193 Ga0496114_0033987 3300048917 Bacteria 4204
194 Ga0501067_0006346 3300049583 Bacteria 6555
195 Ga0501068_0028422 3300049584 Bacteria 3307
196 Ga0501075_0000335 3300049591 Bacteria 26522
197 Ga0501077_0000935 3300049593 Bacteria 17605
198 Ga0501080_0024447 3300049742 Bacteria 5599
199 nmdc:mga08y16_291836_c1 3300050511 Unclassified 1681
200 nmdc:mga0n895_117367_c1 3300050512 Bacteria 2680
201 Ga0495595_0071241 3300053084 Bacteria 1643
202 Ga0495619_0011030 3300053085 Bacteria 5685
203 Ga0495619_0068188 3300053085 Bacteria 2376
204 Ga0501082_0008368 3300060353 Bacteria 8922
205 Ga0466962_0018713 3300061719 Bacteria 3330
206 Ga0495604_0062178
207 rootH2_10182402
208 Ga0070683_100005601
209 Ga0070683_100207674
210 Ga0070680_100085484
211 Ga0070660_100004360
212 Ga0070660_100009459
213 Ga0070659_100020944
214 Ga0070709_10000015
215 Ga0070714_100006143
216 Ga0070714_100310301
217 Ga0070710_10002060
218 Ga0070711_100017176
219 Ga0070711_100047300
220 Ga0070681_10079177
221 Ga0070698_100024269
222 Ga0070698_100037017
223 Ga0070698_100059981
224 Ga0070699_100157241
225 Ga0070679_100115012
226 Ga0070679_100276504
227 Ga0068855_100222139
228 Ga0070664_100078410
229 Ga0068852_100083230
230 Ga0081539_10002673
231 Ga0070717_10042061
232 Ga0070717_10106225
233 Ga0070712_100013972
234 Ga0075434_100057870
235 Ga0105237_10111807
236 Ga0105238_10460506
237 Ga0157369_10031848
238 Ga0157369_10097414
239 Ga0157372_10009736
240 Ga0157372_10278062
241 Ga0213871_10001997
242 Ga0207699_10000011
243 Ga0207699_10079731
244 Ga0207707_10079039
245 Ga0207707_10124087
246 Ga0207695_10025260
247 Ga0207671_10015967
248 Ga0207660_10022198
249 Ga0207660_10212927
250 Ga0207657_10007859
251 Ga0207657_10013130
252 Ga0207657_10073487
253 Ga0207652_10021551
254 Ga0207646_10002005
255 Ga0207646_10039067
256 Ga0207700_10011302
257 Ga0207700_10198272
258 Ga0207700_10214640
259 Ga0207664_10016884
260 Ga0207664_10026497
261 Ga0207664_10042305
262 Ga0207664_10140089
263 Ga0207690_10227859
264 Ga0207665_10071684
265 Ga0207651_10189648
266 Ga0207698_10282749
267 Ga0209971_1004643
268 Ga0265334_10001942
269 Ga0265334_10009260
270 Ga0265318_10000858
271 Ga0265336_10052635
272 Ga0265338_10015327
273 Ga0265338_10027910
274 Ga0265330_10000745
275 Ga0265330_10046906
276 Ga0265332_10002053
277 Ga0265328_10005531
278 Ga0265320_10004743
279 Ga0265320_10087228
280 Ga0265325_10000817
281 Ga0265329_10001779
282 Ga0265329_10046436
283 Ga0265340_10002260
284 Ga0265340_10030938
285 Ga0265339_10042009
286 Ga0265316_10005490
287 Ga0265316_10018062
288 Ga0265313_10004403
289 Ga0265313_10019070
290 Ga0307508_10041777
291 Ga0265314_10011053
292 Ga0265314_10070539
293 Ga0265342_10082206
294 Ga0373929_0000009
295 Ga0373961_0001018
296 Ga0373935_0006054
297 Ga0395899_0030202
298 Ga0395900_0107009
299 Ga0395898_0191812
300 Ga0395901_0132911
301 Ga0436360_0109347
302 Ga0466969_0025646
303 Ga0466966_0077684
304 Ga0466961_0031741
305 Ga0466963_0000052
306 Ga0466963_0012620
307 Ga0466963_0014296
308 Ga0466963_0018169
309 Ga0466963_0024500
310 Ga0466963_0026013
311 Ga0466963_0037120
312 Ga0466963_0050882
313 Ga0466963_0071867
314 Ga0466963_0075802
315 Ga0466963_0190545
316 Ga0466963_0190798
317 Ga0466964_0002111
318 Ga0466964_0005847
319 Ga0466964_0008160
320 Ga0466964_0024673
321 Ga0466964_0030261
322 Ga0466971_0071268
323 Ga0466971_0112356
324 Ga0466957_0008989
325 Ga0466957_0009069
326 Ga0466957_0013913
327 Ga0466957_0014906
328 Ga0466957_0027542
329 Ga0466959_0006509
330 Ga0466959_0019820
331 Ga0466958_0001783
332 Ga0466958_0002308
333 Ga0466958_0002682
334 Ga0466958_0005159
335 Ga0466958_0006542
336 Ga0466958_0013925
337 Ga0466958_0016398
338 Ga0466967_0000188
339 Ga0466967_0001998
340 Ga0466967_0005230
341 Ga0466967_0008382
342 Ga0466967_0020027
343 Ga0466967_0026770
344 Ga0466967_0034735
345 Ga0466967_0039780
346 Ga0466967_0044121
347 Ga0466967_0084357
348 Ga0466967_0084663
349 Ga0466967_0087251
350 Ga0466967_0177946
351 Ga0466967_0366648
352 Ga0466967_0386441
353 Ga0495592_0143265
354 Ga0495629_0052896
355 Ga0495629_0155768
356 Ga0495641_0013010
357 Ga0495641_0036789
358 Ga0495641_0074256
359 Ga0495582_0012880
360 Ga0495582_0019702
361 Ga0495662_0035949
362 Ga0495607_0010011
363 Ga0495608_0036055
364 Ga0495618_0091369
365 Ga0495630_0009431
366 Ga0495640_0026569
367 Ga0495609_0054582
368 Ga0495656_0003504
369 Ga0495635_0066076
370 Ga0495647_0004598
371 Ga0495658_0120938
372 Ga0495613_0024852
373 Ga0495624_0008405
374 Ga0495589_0046210
375 Ga0495674_0007243
376 Ga0495674_0057517
377 Ga0495674_0106393
378 Ga0495676_0017848
379 Ga0495680_0042691
380 Ga0495677_0020739
381 Ga0495684_0043989
382 Ga0496100_0081147
383 Ga0496104_0037763
384 Ga0496104_0067772
385 Ga0496104_0174897
386 Ga0496105_0002747
387 Ga0496108_0047306
388 Ga0496108_0077809
389 Ga0496109_0029950
390 Ga0496109_0174121
391 Ga0496111_0045744
392 Ga0496111_0240462
393 Ga0496112_0015247
394 Ga0496112_0047223
395 Ga0496112_0189876
396 Ga0496112_0352567
397 Ga0496114_0000031
398 Ga0496114_0033987
399 Ga0501067_0006346
400 Ga0501068_0028422
401 Ga0501075_0000335
402 Ga0501077_0000935
403 Ga0501080_0024447
404 nmdc:mga08y16_291836_c1
405 nmdc:mga0n895_117367_c1
406 Ga0495595_0071241
407 Ga0495619_0011030
408 Ga0495619_0068188
409 Ga0501082_0008368
410 Ga0466962_0018713

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

249

381

0.94

PF01225

Mur_ligase

Mur ligase family, catalytic domain

10

94

0.92

PF08245

Mur_ligase_M

Mur ligase middle domain

98

196

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f00-assembly1.cif.gz_B escherichia coli murc 0.9075 12 396
1p3d-assembly2.cif.gz_B crystal structure of udp-n-acetylmuramic acid:l-alanine ligase (murc) in complex with uma and anp. 0.9073 12 395
1gqy-assembly1.cif.gz_A murc - crystal structure of the enzyme from haemophilus influenzae complexed with amppcp 0.8921 12 396
7bva-assembly2.cif.gz_B crystal structure of udp-n-acetylmuramic acid l-alanine ligase (murc) from mycobacterium bovis 0.8892 12 396
2f00-assembly1.cif.gz_A escherichia coli murc 0.8857 12 393
ID Description Score Start End Superfamily
af_P9WJL7_104_328_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.903 87 251 3.40.1190.10
af_P9WJL7_329_485_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8957 254 396 3.90.190.20
1j6uA02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8888 87 251 3.40.1190.10
2f00B02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8805 87 251 3.40.1190.10
af_Q2FXJ0_297_436_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8735 254 396 3.90.190.20
ID Description Score Start End GO Terms
AF-A0A538GR10-F1-model_v4 Mur ligase C-terminal domain-containing protein 0.9762 116 397 GO:0005524
GO:0009058
GO:0016881
AF-A0A538GR10-F1-model_v4 Mur ligase C-terminal domain-containing protein 0.9694 116 397 GO:0005524
GO:0009058
GO:0016881
AF-A0A7W1AB17-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.968 7 280 GO:0005524
GO:0009058
GO:0016881
AF-A0A538ERQ5-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.966 24 397 GO:0005524
GO:0008360
GO:0009252
GO:0016881
GO:0051301
GO:0071555
AF-A0A7W1AB17-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.961 7 280 GO:0005524
GO:0009058
GO:0016881

Map