F313972

General Info

Members Datasets Scaffolds Average Seq Length
205 111 410 404

Family's Representative Sequence

Representative Sequence 3300026089|Ga0207648_10065264|Ga0207648_100652642
Length 440
Sequence MPTENTTTGDNIFSGVKVVDLASFIAGPGAAVILSDFGADVIKVEPPMGELWRMANRFPPQPLAKDAYQWHLNNRNKRGLALDLKSPNAGKVLERLVKWADVLIVNTPHRARKKLKLEYGDVEQWNPRLIYADLTGYGEKGPDADLPGFDVTAYWSRTGLLSLTRDAGAPPTLPFAGTGDSPTAVGLFSAIVTGLYRRERTGKGSYVTTSLLSEGIWSASVAIQAALCEAKFSPQHDRKNPANAAMNVYKSSDDIWFLLVVTPDKLPAVATGIGRADLLKDPRFADPSQLTANMSQLTAIVDEIFSAQPMTHWREVLDKANITYGLVRDPSDVIKDPQLRENGIVVPLEGAGGNLKATISSPIQVHGVTKEPAKRAPELGEHDEVILEELGFDAKEIDDLRTSGTLGKPKGTVKATGCSKCTGSEMMGSEEAERREKVTI

Samples

Sample ID Description Type Environment
1 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
3 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
69 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
77 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
78 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
84 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
85 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
86 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
87 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
99 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
100 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
101 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
102 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
103 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
104 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
107 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.1
Metatranscriptomes 3.41
Isolates 0.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.9
Nodule 0
Rhizoplane 1.46
Rhizosphere 91.71
Stem 0
Stem Tuber 0
Unclassified 1.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207648_10065264 3300026089 Bacteria 3174
2 ARcpr5yngRDRAFT_c000266 3300000043 Bacteria 7488
3 ARSoilOldRDRAFT_c000837 3300000044 Bacteria 3084
4 JGI25404J52841_10002582 3300003659 Bacteria 3449
5 JGI25404J52841_10008172 3300003659 Bacteria 2224
6 Ga0065715_10125758 3300005293 Bacteria 2123
7 Ga0070676_10121461 3300005328 Bacteria 1640
8 Ga0068869_100003700 3300005334 Bacteria 9409
9 Ga0068868_100016804 3300005338 Bacteria 5443
10 Ga0070687_100079255 3300005343 Bacteria 1787
11 Ga0070668_100009770 3300005347 Bacteria 7112
12 Ga0070675_100002506 3300005354 Archaea 13750
13 Ga0070711_100017649 3300005439 Bacteria 4546
14 Ga0070706_100043142 3300005467 Bacteria 4166
15 Ga0070698_100217159 3300005471 Bacteria 1846
16 Ga0070698_100218341 3300005471 Bacteria 1841
17 Ga0070699_100016345 3300005518 Bacteria 6372
18 Ga0070696_100164590 3300005546 Bacteria 1636
19 Ga0068861_100000707 3300005719 Bacteria 19902
20 Ga0068860_100000071 3300005843 Bacteria 178413
21 Ga0068860_100015747 3300005843 Bacteria 7382
22 Ga0068862_100001998 3300005844 Bacteria 18487
23 Ga0081455_10124849 3300005937 Bacteria 2022
24 Ga0081540_1000288 3300005983 Bacteria 52745
25 Ga0081540_1002243 3300005983 Bacteria 15912
26 Ga0081540_1004557 3300005983 Bacteria 10503
27 Ga0081540_1004665 3300005983 Bacteria 10371
28 Ga0081540_1005530 3300005983 Bacteria 9415
29 Ga0075432_10015407 3300006058 Bacteria 2607
30 Ga0097621_100035958 3300006237 Bacteria 3959
31 Ga0068871_100008754 3300006358 Bacteria 7285
32 Ga0075428_100021831 3300006844 Bacteria 7088
33 Ga0075428_100049261 3300006844 Bacteria 4622
34 Ga0075428_100075624 3300006844 Bacteria 3677
35 Ga0075428_100209578 3300006844 Bacteria 2106
36 Ga0075430_100008067 3300006846 Bacteria 8899
37 Ga0075430_100020121 3300006846 Bacteria 5679
38 Ga0075431_100055928 3300006847 Bacteria 4071
39 Ga0075431_100079076 3300006847 Bacteria 3395
40 Ga0075431_100118612 3300006847 Bacteria 2730
41 Ga0075433_10027081 3300006852 Bacteria 4859
42 Ga0075433_10055059 3300006852 Bacteria 3472
43 Ga0075433_10174090 3300006852 Bacteria 1915
44 Ga0075434_100020499 3300006871 Bacteria 6412
45 Ga0075434_100036576 3300006871 Bacteria 4857
46 Ga0075434_100059552 3300006871 Bacteria 3796
47 Ga0075434_100082239 3300006871 Bacteria 3218
48 Ga0075434_100157443 3300006871 Bacteria 2291
49 Ga0075434_100185004 3300006871 Bacteria 2104
50 Ga0075429_100009030 3300006880 Bacteria 8659
51 Ga0075429_100010088 3300006880 Bacteria 8184
52 Ga0075429_100028200 3300006880 Bacteria 4874
53 Ga0075429_100251851 3300006880 Bacteria 1546
54 Ga0075436_100006285 3300006914 Bacteria 8139
55 Ga0075436_100140922 3300006914 Bacteria 1694
56 Ga0075436_100186011 3300006914 Bacteria 1469
57 Ga0075435_100004979 3300007076 Bacteria 9221
58 Ga0075435_100018262 3300007076 Bacteria 5328
59 Ga0075435_100115223 3300007076 Bacteria 2238
60 Ga0099794_10017086 3300007265 Bacteria 3229
61 Ga0099795_10000922 3300007788 Bacteria 5950
62 Ga0099795_10012132 3300007788 Bacteria 2602
63 Ga0099795_10013756 3300007788 Bacteria 2492
64 Ga0111539_10010608 3300009094 Bacteria 11601
65 Ga0111539_10023003 3300009094 Bacteria 7653
66 Ga0111539_10025594 3300009094 Bacteria 7233
67 Ga0111539_10116680 3300009094 Bacteria 3130
68 Ga0111539_10146694 3300009094 Bacteria 2763
69 Ga0111539_10159497 3300009094 Bacteria 2638
70 Ga0111539_10265116 3300009094 Bacteria 2000
71 Ga0114129_10010093 3300009147 Bacteria 13463
72 Ga0114129_10021282 3300009147 Bacteria 9208
73 Ga0114129_10027448 3300009147 Bacteria 8059
74 Ga0114129_10029101 3300009147 Bacteria 7825
75 Ga0114129_10032552 3300009147 Bacteria 7368
76 Ga0114129_10041568 3300009147 Bacteria 6477
77 Ga0114129_10042698 3300009147 Bacteria 6382
78 Ga0114129_10109405 3300009147 Bacteria 3815
79 Ga0114129_10160920 3300009147 Bacteria 3066
80 Ga0114129_10217398 3300009147 Bacteria 2580
81 Ga0114129_10514429 3300009147 Bacteria 1561
82 Ga0114129_10584722 3300009147 Unclassified 1448
83 Ga0105243_10056546 3300009148 Bacteria 3121
84 Ga0105242_10240157 3300009176 Bacteria 1628
85 Ga0105248_10041549 3300009177 Bacteria 5155
86 Ga0105249_10108580 3300009553 Bacteria 2620
87 Ga0105249_10119222 3300009553 Bacteria 2506
88 Ga0099796_10005871 3300010159 Bacteria 3098
89 Ga0099796_10011328 3300010159 Bacteria 2485
90 Ga0105239_10386989 3300010375 Bacteria 1582
91 Ga0163162_10033808 3300013306 Bacteria 5083
92 Ga0157377_10001065 3300014745 Archaea 11591
93 Ga0157377_10045360 3300014745 Bacteria 2455
94 Ga0206352_10231121 3300020078 Bacteria 2593
95 Ga0207688_10047192 3300025901 Bacteria 2405
96 Ga0207699_10103813 3300025906 Bacteria 1809
97 Ga0207645_10037844 3300025907 Bacteria 3096
98 Ga0207684_10001499 3300025910 Bacteria 25075
99 Ga0207684_10112911 3300025910 Bacteria 2326
100 Ga0207663_10016970 3300025916 Bacteria 4048
101 Ga0207663_10025400 3300025916 Bacteria 3424
102 Ga0207663_10097566 3300025916 Bacteria 1966
103 Ga0207646_10017825 3300025922 Bacteria 6633
104 Ga0207659_10003122 3300025926 Bacteria 9898
105 Ga0207709_10020677 3300025935 Bacteria 3716
106 Ga0207711_10182582 3300025941 Bacteria 1909
107 Ga0207689_10003491 3300025942 Archaea 14363
108 Ga0207712_10003517 3300025961 Bacteria 9890
109 Ga0207668_10033589 3300025972 Bacteria 3399
110 Ga0207668_10062070 3300025972 Bacteria 2630
111 Ga0207640_10052407 3300025981 Bacteria 2658
112 Ga0207677_10010940 3300026023 Bacteria 5153
113 Ga0207641_10402178 3300026088 Bacteria 1315
114 Ga0207675_100001650 3300026118 Bacteria 22347
115 Ga0207675_100005438 3300026118 Bacteria 12208
116 Ga0207683_10110732 3300026121 Bacteria 2458
117 Ga0209588_1004182 3300027671 Bacteria 4052
118 Ga0209588_1010520 3300027671 Unclassified 2782
119 Ga0207428_10002322 3300027907 Archaea 19048
120 Ga0207428_10011286 3300027907 Bacteria 7912
121 Ga0207428_10057960 3300027907 Bacteria 3075
122 Ga0207428_10104167 3300027907 Bacteria 2190
123 Ga0268265_10004898 3300028380 Bacteria 9217
124 Ga0268265_10007013 3300028380 Bacteria 7619
125 Ga0268265_10289112 3300028380 Bacteria 1471
126 Ga0268264_10000073 3300028381 Bacteria 260615
127 Ga0268264_10229796 3300028381 Bacteria 1713
128 Ga0307515_10123349 3300028794 Bacteria 2915
129 Ga0307511_10000192 3300030521 Bacteria 60792
130 Ga0307511_10055182 3300030521 Bacteria 3121
131 Ga0265762_1003885 3300030760 Bacteria 2677
132 Ga0265320_10014916 3300031240 Bacteria 4407
133 Ga0265340_10075698 3300031247 Bacteria 1590
134 Ga0307510_10000003 3300033180 Bacteria 756654
135 Ga0307510_10000688 3300033180 Bacteria 34580
136 Ga0395900_0191346 3300037418 Bacteria 2075
137 Ga0395898_0033092 3300037466 Bacteria 5161
138 Ga0395905_0034257 3300037471 Bacteria 4768
139 Ga0436362_1002885 3300039453 Bacteria 2706
140 Ga0439460_0006517 3300042461 Bacteria 2901
141 Ga0453683_0056086 3300044673 Bacteria 2465
142 Ga0495638_0008289 3300046460 Bacteria 7379
143 Ga0495656_0051045 3300046615 Bacteria 1769
144 Ga0495634_0012329 3300046642 Bacteria 6194
145 Ga0495674_0007732 3300047319 Bacteria 10265
146 Ga0495672_0015893 3300047320 Bacteria 5096
147 Ga0495672_0054209 3300047320 Bacteria 2345
148 Ga0495687_027784 3300047443 Bacteria 2643
149 Ga0495684_0005292 3300047471 Bacteria 10052
150 Ga0496101_0157764 3300048904 Bacteria 1739
151 Ga0496105_0027218 3300048908 Bacteria 4669
152 Ga0496108_0229647 3300048911 Unclassified 1614
153 nmdc:mga05p37_10022_c1 3300050507 Bacteria 11250
154 nmdc:mga05p37_12506_c1 3300050507 Bacteria 10132
155 nmdc:mga05p37_16507_c1 3300050507 Bacteria 8895
156 nmdc:mga05p37_24030_c1 3300050507 Bacteria 7403
157 nmdc:mga05p37_32551_c1 3300050507 Bacteria 6377
158 nmdc:mga05p37_422571_c1 3300050507 Bacteria 1551
159 nmdc:mga05p37_53881_c1 3300050507 Bacteria 4948
160 nmdc:mga05p37_6930_c1 3300050507 Bacteria 13355
161 nmdc:mga09592_12509_c1 3300050508 Bacteria 6915
162 nmdc:mga09592_249455_c1 3300050508 Bacteria 1538
163 nmdc:mga09592_5857_c1 3300050508 Bacteria 10027
164 nmdc:mga0qj67_43855_c1 3300050509 Bacteria 3523
165 nmdc:mga0qj67_60284_c1 3300050509 Bacteria 3011
166 nmdc:mga0qj67_71527_c1 3300050509 Bacteria 2769
167 nmdc:mga06r32_112481_c1 3300050510 Bacteria 2679
168 nmdc:mga06r32_163351_c1 3300050510 Bacteria 2210
169 nmdc:mga06r32_363141_c1 3300050510 Bacteria 1432
170 nmdc:mga06r32_56417_c1 3300050510 Bacteria 3771
171 nmdc:mga06r32_6322_c1 3300050510 Bacteria 10636
172 nmdc:mga08y16_13361_c1 3300050511 Bacteria 8637
173 nmdc:mga08y16_155603_c1 3300050511 Bacteria 2376
174 nmdc:mga08y16_7065_c1 3300050511 Bacteria 11785
175 nmdc:mga08y16_77604_c1 3300050511 Bacteria 3464
176 nmdc:mga0n895_157622_c1 3300050512 Bacteria 2301
177 nmdc:mga0n895_165101_c1 3300050512 Bacteria 2246
178 nmdc:mga0n895_182780_c1 3300050512 Bacteria 2128
179 nmdc:mga0n895_18410_c1 3300050512 Bacteria 6463
180 nmdc:mga0n895_246898_c1 3300050512 Bacteria 1812
181 nmdc:mga0n895_3870_c1 3300050512 Bacteria 12156
182 nmdc:mga0rr50_11318_c1 3300050513 Bacteria 5706
183 nmdc:mga0rr50_15378_c1 3300050513 Bacteria 5049
184 nmdc:mga0rr50_3602_c1 3300050513 Bacteria 8955
185 nmdc:mga08x19_3005_c1 3300050514 Bacteria 10135
186 nmdc:mga0a205_126521_c1 3300050515 Bacteria 2455
187 nmdc:mga0a205_20078_c1 3300050515 Bacteria 6303
188 nmdc:mga0a205_25437_c1 3300050515 Bacteria 5640
189 nmdc:mga0a205_9051_c1 3300050515 Bacteria 9081
190 Ga0495601_0005953 3300053077 Bacteria 7114
191 Ga0495619_0185587 3300053085 Bacteria 1439
192 Ga0500583_0015576 3300053092 Bacteria 3011
193 Ga0500651_0017378 3300053093 Bacteria 4436
194 Ga0500651_0101371 3300053093 Bacteria 1765
195 Ga0500555_004479 3300053103 Bacteria 3966
196 Ga0500642_0040406 3300053130 Bacteria 2011
197 Ga0500568_0002574 3300053139 Bacteria 10560
198 Ga0500616_0000342 3300053153 Bacteria 66451
199 Ga0500637_0071374 3300053178 Bacteria 1997
200 Ga0587073_0004599 3300059492 Bacteria 1995
201 Ga0587082_003148 3300059504 Unclassified 1952
202 Ga0587082_004559 3300059504 Bacteria 1747
203 Ga0587085_002314 3300059506 Bacteria 1924
204 Ga0587091_005679 3300059511 Bacteria 1713
205 2824663930 2824661429 Bacteria 9877870
206 Ga0207648_10065264
207 ARcpr5yngRDRAFT_c000266
208 ARSoilOldRDRAFT_c000837
209 JGI25404J52841_10002582
210 JGI25404J52841_10008172
211 Ga0065715_10125758
212 Ga0070676_10121461
213 Ga0068869_100003700
214 Ga0068868_100016804
215 Ga0070687_100079255
216 Ga0070668_100009770
217 Ga0070675_100002506
218 Ga0070711_100017649
219 Ga0070706_100043142
220 Ga0070698_100217159
221 Ga0070698_100218341
222 Ga0070699_100016345
223 Ga0070696_100164590
224 Ga0068861_100000707
225 Ga0068860_100000071
226 Ga0068860_100015747
227 Ga0068862_100001998
228 Ga0081455_10124849
229 Ga0081540_1000288
230 Ga0081540_1002243
231 Ga0081540_1004557
232 Ga0081540_1004665
233 Ga0081540_1005530
234 Ga0075432_10015407
235 Ga0097621_100035958
236 Ga0068871_100008754
237 Ga0075428_100021831
238 Ga0075428_100049261
239 Ga0075428_100075624
240 Ga0075428_100209578
241 Ga0075430_100008067
242 Ga0075430_100020121
243 Ga0075431_100055928
244 Ga0075431_100079076
245 Ga0075431_100118612
246 Ga0075433_10027081
247 Ga0075433_10055059
248 Ga0075433_10174090
249 Ga0075434_100020499
250 Ga0075434_100036576
251 Ga0075434_100059552
252 Ga0075434_100082239
253 Ga0075434_100157443
254 Ga0075434_100185004
255 Ga0075429_100009030
256 Ga0075429_100010088
257 Ga0075429_100028200
258 Ga0075429_100251851
259 Ga0075436_100006285
260 Ga0075436_100140922
261 Ga0075436_100186011
262 Ga0075435_100004979
263 Ga0075435_100018262
264 Ga0075435_100115223
265 Ga0099794_10017086
266 Ga0099795_10000922
267 Ga0099795_10012132
268 Ga0099795_10013756
269 Ga0111539_10010608
270 Ga0111539_10023003
271 Ga0111539_10025594
272 Ga0111539_10116680
273 Ga0111539_10146694
274 Ga0111539_10159497
275 Ga0111539_10265116
276 Ga0114129_10010093
277 Ga0114129_10021282
278 Ga0114129_10027448
279 Ga0114129_10029101
280 Ga0114129_10032552
281 Ga0114129_10041568
282 Ga0114129_10042698
283 Ga0114129_10109405
284 Ga0114129_10160920
285 Ga0114129_10217398
286 Ga0114129_10514429
287 Ga0114129_10584722
288 Ga0105243_10056546
289 Ga0105242_10240157
290 Ga0105248_10041549
291 Ga0105249_10108580
292 Ga0105249_10119222
293 Ga0099796_10005871
294 Ga0099796_10011328
295 Ga0105239_10386989
296 Ga0163162_10033808
297 Ga0157377_10001065
298 Ga0157377_10045360
299 Ga0206352_10231121
300 Ga0207688_10047192
301 Ga0207699_10103813
302 Ga0207645_10037844
303 Ga0207684_10001499
304 Ga0207684_10112911
305 Ga0207663_10016970
306 Ga0207663_10025400
307 Ga0207663_10097566
308 Ga0207646_10017825
309 Ga0207659_10003122
310 Ga0207709_10020677
311 Ga0207711_10182582
312 Ga0207689_10003491
313 Ga0207712_10003517
314 Ga0207668_10033589
315 Ga0207668_10062070
316 Ga0207640_10052407
317 Ga0207677_10010940
318 Ga0207641_10402178
319 Ga0207675_100001650
320 Ga0207675_100005438
321 Ga0207683_10110732
322 Ga0209588_1004182
323 Ga0209588_1010520
324 Ga0207428_10002322
325 Ga0207428_10011286
326 Ga0207428_10057960
327 Ga0207428_10104167
328 Ga0268265_10004898
329 Ga0268265_10007013
330 Ga0268265_10289112
331 Ga0268264_10000073
332 Ga0268264_10229796
333 Ga0307515_10123349
334 Ga0307511_10000192
335 Ga0307511_10055182
336 Ga0265762_1003885
337 Ga0265320_10014916
338 Ga0265340_10075698
339 Ga0307510_10000003
340 Ga0307510_10000688
341 Ga0395900_0191346
342 Ga0395898_0033092
343 Ga0395905_0034257
344 Ga0436362_1002885
345 Ga0439460_0006517
346 Ga0453683_0056086
347 Ga0495638_0008289
348 Ga0495656_0051045
349 Ga0495634_0012329
350 Ga0495674_0007732
351 Ga0495672_0015893
352 Ga0495672_0054209
353 Ga0495687_027784
354 Ga0495684_0005292
355 Ga0496101_0157764
356 Ga0496105_0027218
357 Ga0496108_0229647
358 nmdc:mga05p37_10022_c1
359 nmdc:mga05p37_12506_c1
360 nmdc:mga05p37_16507_c1
361 nmdc:mga05p37_24030_c1
362 nmdc:mga05p37_32551_c1
363 nmdc:mga05p37_422571_c1
364 nmdc:mga05p37_53881_c1
365 nmdc:mga05p37_6930_c1
366 nmdc:mga09592_12509_c1
367 nmdc:mga09592_249455_c1
368 nmdc:mga09592_5857_c1
369 nmdc:mga0qj67_43855_c1
370 nmdc:mga0qj67_60284_c1
371 nmdc:mga0qj67_71527_c1
372 nmdc:mga06r32_112481_c1
373 nmdc:mga06r32_163351_c1
374 nmdc:mga06r32_363141_c1
375 nmdc:mga06r32_56417_c1
376 nmdc:mga06r32_6322_c1
377 nmdc:mga08y16_13361_c1
378 nmdc:mga08y16_155603_c1
379 nmdc:mga08y16_7065_c1
380 nmdc:mga08y16_77604_c1
381 nmdc:mga0n895_157622_c1
382 nmdc:mga0n895_165101_c1
383 nmdc:mga0n895_182780_c1
384 nmdc:mga0n895_18410_c1
385 nmdc:mga0n895_246898_c1
386 nmdc:mga0n895_3870_c1
387 nmdc:mga0rr50_11318_c1
388 nmdc:mga0rr50_15378_c1
389 nmdc:mga0rr50_3602_c1
390 nmdc:mga08x19_3005_c1
391 nmdc:mga0a205_126521_c1
392 nmdc:mga0a205_20078_c1
393 nmdc:mga0a205_25437_c1
394 nmdc:mga0a205_9051_c1
395 Ga0495601_0005953
396 Ga0495619_0185587
397 Ga0500583_0015576
398 Ga0500651_0017378
399 Ga0500651_0101371
400 Ga0500555_004479
401 Ga0500642_0040406
402 Ga0500568_0002574
403 Ga0500616_0000342
404 Ga0500637_0071374
405 Ga0587073_0004599
406 Ga0587082_003148
407 Ga0587082_004559
408 Ga0587085_002314
409 Ga0587091_005679
410 2824663930

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

13

383

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kgy-assembly1.cif.gz_A hocl-induced flavoprotein disulfide reductase rcla from escherichia coli 0.6594 11 47
1sc6-assembly1.cif.gz_D crystal structure of w139g d-3-phosphoglycerate dehydrogenase complexed with nad+ 0.6489 8 118
2cuk-assembly2.cif.gz_D crystal structure of tt0316 protein from thermus thermophilus hb8 0.6459 7 107
4air-assembly1.cif.gz_A leishmania major cysteine synthase 0.6394 10 49
3gvx-assembly1.cif.gz_A crystal structure of glycerate dehydrogenase related protein from thermoplasma acidophilum 0.6361 6 103
ID Description Score Start End Superfamily
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.8273 219 302 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.8243 218 305 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.8195 218 305 3.30.1540.10
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.7855 219 302 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.7846 218 305 3.30.1540.10
ID Description Score Start End GO Terms
AF-A0A6L7N055-F1-model_v4 CoA transferase 0.8535 1 128 GO:0008410
AF-A0A2E6YVI6-F1-model_v4 deleted 0.8525 1 143
AF-A0A2A5WWM1-F1-model_v4 CoA transferase 0.8365 2 128 GO:0003824
AF-A0A0P1EIV9-F1-model_v4 Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF (EC 2.8.3.15) 0.8236 1 129 GO:0033877
AF-A0A7H4Q5G3-F1-model_v4 CoA transferase 0.8235 223 380 GO:0008410

Map