F313923

General Info

Members Datasets Scaffolds Average Seq Length
205 150 203 294

Family's Representative Sequence

Representative Sequence 3300025918|Ga0207662_10110458|Ga0207662_101104582
Length 330
Sequence MVSSVGSKNKELTFNAIGAEAGPRSSDPIAIHTYGKGIDLKGIILAGGKGSRLFPLTVSISKQLLPVYNKPMIYYPLSLLMLGGIRDVLIITVPEDAESFRKLLGDGAKWGMTFSYAEQTEARGLADAFLVGSEFVGREPVCLILGDNIFFGTGLSDQLESAAKLDEGALIFAYAVRDAQRYGVVEVDEQGRAVGIEEKPVRPRSNYAVPGLYFYDGTVVERARRLRPSARGELEITDLNKSYLDSGELKVESIGRGVAWLDAGTHESLLQASNFVQTIEERQGLMISSPEEIAFHKGYITGGQLRDLATQLGTTSYAGYLLSLVDHHDH

Samples

Sample ID Description Type Environment
1 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
2 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
88 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
89 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
93 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
94 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
99 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
102 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
103 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
109 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
110 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
111 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
117 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
118 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
119 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
120 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
128 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.02
Metatranscriptomes 0
Isolates 0.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.88
Nodule 0
Rhizoplane 7.32
Rhizosphere 84.88
Stem 0
Stem Tuber 0
Unclassified 2.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055526_1030281 3300003771 Bacteria 1583
2 Ga0055531_10004683 3300003794 Bacteria 8197
3 Ga0065715_10000434 3300005293 Bacteria 20319
4 Ga0070676_10029323 3300005328 Bacteria 3129
5 Ga0070690_100171674 3300005330 Bacteria 1492
6 Ga0070670_100000025 3300005331 Bacteria 188514
7 Ga0070670_100001473 3300005331 Bacteria 18961
8 Ga0070680_100265752 3300005336 Bacteria 1452
9 Ga0070682_100064896 3300005337 Bacteria 2319
10 Ga0068868_100000159 3300005338 Bacteria 44200
11 Ga0070692_10158121 3300005345 Bacteria 1296
12 Ga0070675_100009516 3300005354 Bacteria 7563
13 Ga0070671_100016712 3300005355 Bacteria 5933
14 Ga0070673_100562154 3300005364 Bacteria 1037
15 Ga0070667_100015038 3300005367 Bacteria 6394
16 Ga0070701_10129302 3300005438 Bacteria 1433
17 Ga0070694_100010288 3300005444 Bacteria 5766
18 Ga0070662_100356190 3300005457 Bacteria 1200
19 Ga0068867_100272306 3300005459 Bacteria 1385
20 Ga0070685_10021906 3300005466 Bacteria 3477
21 Ga0070685_10236505 3300005466 Bacteria 1204
22 Ga0070706_100058884 3300005467 Bacteria 3545
23 Ga0070698_100010348 3300005471 Bacteria 9960
24 Ga0070686_100049493 3300005544 Bacteria 2667
25 Ga0070696_100141855 3300005546 Bacteria 1757
26 Ga0070665_100004630 3300005548 Bacteria 14377
27 Ga0068852_100187532 3300005616 Bacteria 1949
28 Ga0068859_100191069 3300005617 Bacteria 2132
29 Ga0068859_100600007 3300005617 Bacteria 1194
30 Ga0068861_100074764 3300005719 Bacteria 2635
31 Ga0068870_10006867 3300005840 Bacteria 5049
32 Ga0068863_100321087 3300005841 Bacteria 1504
33 Ga0068858_100142094 3300005842 Bacteria 2254
34 Ga0081539_10001259 3300005985 Bacteria 44898
35 Ga0081539_10010531 3300005985 Bacteria 7490
36 Ga0075365_10112969 3300006038 Bacteria 1868
37 Ga0075363_100092253 3300006048 Bacteria 1668
38 Ga0097621_100190683 3300006237 Bacteria 1775
39 Ga0068871_100000337 3300006358 Bacteria 32470
40 Ga0068871_100056167 3300006358 Bacteria 3199
41 Ga0075431_100006289 3300006847 Bacteria 11801
42 Ga0075431_100006910 3300006847 Bacteria 11281
43 Ga0075431_100401244 3300006847 Bacteria 1372
44 Ga0075433_10039096 3300006852 Bacteria 4100
45 Ga0075433_10328271 3300006852 Bacteria 1353
46 Ga0075434_100039280 3300006871 Bacteria 4689
47 Ga0075436_100013728 3300006914 Bacteria 5548
48 Ga0097620_100191061 3300006931 Bacteria 2132
49 Ga0097620_100599999 3300006931 Bacteria 1194
50 Ga0099795_10083114 3300007788 Bacteria 1229
51 Ga0105240_10000859 3300009093 Bacteria 54758
52 Ga0105245_10000043 3300009098 Bacteria 136604
53 Ga0114129_10096235 3300009147 Bacteria 4099
54 Ga0114129_10191741 3300009147 Bacteria 2775
55 Ga0114129_10548154 3300009147 Bacteria 1504
56 Ga0105243_10441930 3300009148 Bacteria 1218
57 Ga0105243_10447392 3300009148 Bacteria 1211
58 Ga0105242_10000464 3300009176 Bacteria 32271
59 Ga0105242_10373540 3300009176 Bacteria 1323
60 Ga0105248_10001745 3300009177 Bacteria 24183
61 Ga0105238_10027822 3300009551 Bacteria 5761
62 Ga0099796_10029276 3300010159 Bacteria 1775
63 Ga0105239_10156810 3300010375 Bacteria 2542
64 Ga0105246_10077302 3300011119 Bacteria 2361
65 Ga0157378_10038255 3300013297 Bacteria 4251
66 Ga0163162_10024414 3300013306 Bacteria 5967
67 Ga0163162_10116491 3300013306 Bacteria 2772
68 Ga0157375_10000010 3300013308 Bacteria 361011
69 Ga0157375_10047401 3300013308 Bacteria 4196
70 Ga0157375_10141839 3300013308 Bacteria 2530
71 Ga0157380_10092261 3300014326 Bacteria 2502
72 Ga0157380_10133061 3300014326 Bacteria 2125
73 Ga0157376_10000018 3300014969 Bacteria 259397
74 Ga0163161_10024219 3300017792 Bacteria 4287
75 Ga0209784_100041 3300025224 Bacteria 228573
76 Ga0209676_1015224 3300025292 Bacteria 2841
77 Ga0209025_1001373 3300025294 Bacteria 32662
78 Ga0209257_1000307 3300025304 Bacteria 105179
79 Ga0207645_10036512 3300025907 Bacteria 3154
80 Ga0207695_10001410 3300025913 Bacteria 40494
81 Ga0207663_10015822 3300025916 Bacteria 4171
82 Ga0207662_10110458 3300025918 Bacteria 1714
83 Ga0207694_10061833 3300025924 Bacteria 2915
84 Ga0207650_10000117 3300025925 Bacteria 104348
85 Ga0207687_10000024 3300025927 Bacteria 187490
86 Ga0207700_10454061 3300025928 Bacteria 1130
87 Ga0207664_10001053 3300025929 Bacteria 18387
88 Ga0207644_10172559 3300025931 Bacteria 1689
89 Ga0207690_10474669 3300025932 Bacteria 1009
90 Ga0207686_10000090 3300025934 Bacteria 74224
91 Ga0207704_10110027 3300025938 Bacteria 1860
92 Ga0207691_10064793 3300025940 Bacteria 3309
93 Ga0207667_10219671 3300025949 Bacteria 1947
94 Ga0207651_10022871 3300025960 Bacteria 3833
95 Ga0207703_10500454 3300026035 Bacteria 1141
96 Ga0207641_10365789 3300026088 Bacteria 1378
97 Ga0207648_10348480 3300026089 Bacteria 1335
98 Ga0207675_100008257 3300026118 Bacteria 9808
99 Ga0268266_10006848 3300028379 Bacteria 10381
100 Ga0307515_10005687 3300028794 Bacteria 25166
101 Ga0265338_10005693 3300028800 Bacteria 16119
102 Ga0265338_10019812 3300028800 Bacteria 7110
103 Ga0307511_10001596 3300030521 Bacteria 24048
104 Ga0265332_10000106 3300031238 Bacteria 71076
105 Ga0265328_10004102 3300031239 Bacteria 6361
106 Ga0265320_10138111 3300031240 Bacteria 1105
107 Ga0265325_10000182 3300031241 Bacteria 44912
108 Ga0265329_10006546 3300031242 Bacteria 4610
109 Ga0265340_10080249 3300031247 Bacteria 1537
110 Ga0265339_10000130 3300031249 Bacteria 62250
111 Ga0265339_10125825 3300031249 Bacteria 1314
112 Ga0265331_10000074 3300031250 Bacteria 149282
113 Ga0265331_10000148 3300031250 Bacteria 90823
114 Ga0265327_10012522 3300031251 Bacteria 5713
115 Ga0265327_10092764 3300031251 Bacteria 1470
116 Ga0265316_10000037 3300031344 Bacteria 149295
117 Ga0265313_10003124 3300031595 Bacteria 13681
118 Ga0316579_10071395 3300031691 Bacteria 1646
119 Ga0265314_10000248 3300031711 Bacteria 79300
120 Ga0265314_10000315 3300031711 Bacteria 68251
121 Ga0265342_10052441 3300031712 Bacteria 2431
122 Ga0316576_10017505 3300031727 Bacteria 4872
123 Ga0316576_10036768 3300031727 Bacteria 3501
124 Ga0316578_10234090 3300031728 Bacteria 1103
125 Ga0307406_10071827 3300031901 Bacteria 2269
126 Ga0307407_10022282 3300031903 Bacteria 3283
127 Ga0307409_100147510 3300031995 Bacteria 2037
128 Ga0307411_10057765 3300032005 Bacteria 2565
129 Ga0373940_0086129 3300035088 Bacteria 936
130 Ga0373945_0121379 3300035116 Bacteria 1039
131 Ga0373956_0245950 3300035119 Bacteria 850
132 Ga0316574_0021299 3300035398 Bacteria 3848
133 Ga0373937_0224376 3300036401 Bacteria 1769
134 Ga0316582_0143132 3300036647 Bacteria 1613
135 Ga0316582_0332085 3300036647 Bacteria 1045
136 Ga0316584_0047120 3300036712 Bacteria 3219
137 Ga0373925_0286940 3300037068 Bacteria 1327
138 Ga0400488_12273 3300038741 Bacteria 1583
139 Ga0451793_0517678 3300041452 Bacteria 2104
140 Ga0451841_1461100 3300041498 Bacteria 1328
141 Ga0451853_3887589 3300041512 Bacteria 2553
142 Ga0439452_004747 3300042010 Bacteria 4496
143 Ga0451577_0000472 3300042876 Bacteria 69166
144 Ga0453683_0007880 3300044673 Bacteria 7185
145 Ga0453683_0013790 3300044673 Bacteria 5259
146 Ga0453683_0077972 3300044673 Bacteria 2075
147 Ga0453683_0114523 3300044673 Bacteria 1696
148 Ga0453684_0002362 3300044712 Bacteria 46123
149 Ga0453684_0002410 3300044712 Bacteria 45577
150 Ga0453684_0012708 3300044712 Bacteria 13824
151 Ga0453684_0024335 3300044712 Bacteria 8856
152 Ga0453684_0052253 3300044712 Bacteria 5346
153 Ga0453684_0126736 3300044712 Bacteria 3071
154 Ga0453684_0143243 3300044712 Bacteria 2850
155 Ga0453684_0148994 3300044712 Bacteria 2783
156 Ga0453684_0209708 3300044712 Bacteria 2265
157 Ga0453684_0270863 3300044712 Bacteria 1940
158 Ga0453684_0294980 3300044712 Bacteria 1844
159 Ga0453684_0402339 3300044712 Bacteria 1533
160 Ga0453684_0419189 3300044712 Bacteria 1496
161 Ga0453684_0565136 3300044712 Bacteria 1251
162 Ga0453684_0680727 3300044712 Bacteria 1120
163 Ga0451576_0000009 3300045051 Bacteria 712666
164 Ga0451576_0001818 3300045051 Bacteria 34711
165 Ga0451576_0019361 3300045051 Bacteria 7429
166 Ga0451576_0044596 3300045051 Bacteria 4674
167 Ga0451576_0278253 3300045051 Bacteria 1750
168 Ga0495639_0042754 3300046475 Bacteria 2045
169 Ga0495630_0452432 3300046517 Bacteria 984
170 Ga0495656_0000847 3300046615 Bacteria 9876
171 Ga0495636_0022181 3300047318 Bacteria 2565
172 Ga0496100_0106507 3300048903 Bacteria 1941
173 Ga0496101_0132299 3300048904 Bacteria 1895
174 Ga0496102_0260584 3300048905 Bacteria 1635
175 Ga0496104_0005923 3300048907 Bacteria 10705
176 Ga0496105_0021369 3300048908 Bacteria 5238
177 Ga0496106_0042011 3300048909 Bacteria 3428
178 Ga0496106_0050513 3300048909 Bacteria 3134
179 Ga0496106_0056351 3300048909 Bacteria 2971
180 Ga0496107_0109622 3300048910 Bacteria 2028
181 Ga0496108_0000877 3300048911 Bacteria 23467
182 Ga0496109_0001669 3300048912 Bacteria 18492
183 Ga0496110_0170170 3300048913 Bacteria 1976
184 Ga0496111_0272744 3300048914 Bacteria 1255
185 Ga0496112_0376183 3300048915 Bacteria 1361
186 Ga0501073_0085140 3300049589 Bacteria 2200
187 Ga0501077_0009617 3300049593 Bacteria 6011
188 nmdc:mga03n38_173787_c1 3300050490 Bacteria 1099
189 nmdc:mga06z11_25665_c1 3300050494 Bacteria 2795
190 nmdc:mga05p37_533214_c1 3300050507 Bacteria 1340
191 nmdc:mga05p37_6031_c1 3300050507 Bacteria 14275
192 nmdc:mga05p37_86427_c1 3300050507 Bacteria 3865
193 nmdc:mga06r32_2851_c1 3300050510 Bacteria 15513
194 nmdc:mga06r32_5100_c1 3300050510 Bacteria 11809
195 nmdc:mga0n895_121767_c1 3300050512 Bacteria 2630
196 nmdc:mga0n895_182235_c1 3300050512 Bacteria 2132
197 nmdc:mga0n895_583777_c1 3300050512 Bacteria 1121
198 nmdc:mga0n895_843218_c1 3300050512 Bacteria 905
199 nmdc:mga0rr50_145821_c1 3300050513 Bacteria 1909
200 nmdc:mga0rr50_148504_c1 3300050513 Bacteria 1892
201 nmdc:mga08x19_91260_c1 3300050514 Bacteria 2011
202 nmdc:mga0a205_133489_c1 3300050515 Bacteria 2383
203 nmdc:mga0a205_220389_c1 3300050515 Bacteria 1783

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041498 Ga0451841_1461100 Ga0451841_1461100_548_1318 256
2 3300005471 Ga0070698_100010348 Ga0070698_1000103486 263
3 3300050512 nmdc:mga0n895_843218_c1 nmdc:mga0n895_843218_c1_89_886 265
4 3300035116 Ga0373945_0121379 Ga0373945_0121379_195_995 266
5 3300035119 Ga0373956_0245950 Ga0373956_0245950_35_835 266
6 3300050512 nmdc:mga0n895_121767_c1 nmdc:mga0n895_121767_c1_1814_2614 266
7 3300036647 Ga0316582_0332085 Ga0316582_0332085_20_826 267
8 3300026035 Ga0207703_10500454 Ga0207703_105004541 273
9 3300028800 Ga0265338_10019812 Ga0265338_100198124 276
10 3300005457 Ga0070662_100356190 Ga0070662_1003561901 279
11 3300005459 Ga0068867_100272306 Ga0068867_1002723062 279
12 3300005544 Ga0070686_100049493 Ga0070686_1000494932 279
13 3300005617 Ga0068859_100191069 Ga0068859_1001910692 279
14 3300006931 Ga0097620_100191061 Ga0097620_1001910612 279
15 3300025932 Ga0207690_10474669 Ga0207690_104746691 279
16 3300026089 Ga0207648_10348480 Ga0207648_103484802 279
17 3300005985 Ga0081539_10010531 Ga0081539_100105312 287
18 3300006038 Ga0075365_10112969 Ga0075365_101129692 287
19 3300006847 Ga0075431_100401244 Ga0075431_1004012442 287
20 3300048914 Ga0496111_0272744 Ga0496111_0272744_91_972 288
21 iso_pu_bacteria 2740891818 2740995343 288
22 iso_pu_bacteria 3006973921 3006976681 288
23 3300031240 Ga0265320_10138111 Ga0265320_101381111 289
24 3300044712 Ga0453684_0680727 Ga0453684_0680727_136_1005 289
25 3300045051 Ga0451576_0000009 Ga0451576_0000009_412632_413501 289
26 3300045051 Ga0451576_0019361 Ga0451576_0019361_2166_3035 289
27 3300005467 Ga0070706_100058884 Ga0070706_1000588842 290
28 3300006847 Ga0075431_100006289 Ga0075431_10000628913 290
29 3300009147 Ga0114129_10191741 Ga0114129_101917411 290
30 3300009147 Ga0114129_10548154 Ga0114129_105481542 290
31 3300013297 Ga0157378_10038255 Ga0157378_100382554 290
32 3300031727 Ga0316576_10017505 Ga0316576_100175056 290
33 3300041512 Ga0451853_3887589 Ga0451853_3887589_1539_2456 290
34 3300042876 Ga0451577_0000472 Ga0451577_0000472_62042_62914 290
35 3300044673 Ga0453683_0077972 Ga0453683_0077972_987_1859 290
36 3300044712 Ga0453684_0012708 Ga0453684_0012708_8922_9794 290
37 3300044712 Ga0453684_0052253 Ga0453684_0052253_993_1865 290
38 3300044712 Ga0453684_0209708 Ga0453684_0209708_242_1114 290
39 3300044712 Ga0453684_0270863 Ga0453684_0270863_776_1648 290
40 3300044712 Ga0453684_0294980 Ga0453684_0294980_197_1069 290
41 3300044712 Ga0453684_0402339 Ga0453684_0402339_382_1254 290
42 3300045051 Ga0451576_0044596 Ga0451576_0044596_3451_4323 290
43 3300046517 Ga0495630_0452432 Ga0495630_0452432_22_894 290
44 3300050510 nmdc:mga06r32_5100_c1 nmdc:mga06r32_5100_c1_10193_11065 290
45 3300005330 Ga0070690_100171674 Ga0070690_1001716742 291
46 3300005336 Ga0070680_100265752 Ga0070680_1002657522 291
47 3300005337 Ga0070682_100064896 Ga0070682_1000648962 291
48 3300005364 Ga0070673_100562154 Ga0070673_1005621542 291
49 3300005438 Ga0070701_10129302 Ga0070701_101293022 291
50 3300005466 Ga0070685_10236505 Ga0070685_102365052 291
51 3300005719 Ga0068861_100074764 Ga0068861_1000747642 291
52 3300005841 Ga0068863_100321087 Ga0068863_1003210872 291
53 3300006358 Ga0068871_100000337 Ga0068871_10000033715 291
54 3300006358 Ga0068871_100056167 Ga0068871_1000561674 291
55 3300006847 Ga0075431_100006910 Ga0075431_1000069103 291
56 3300006852 Ga0075433_10039096 Ga0075433_100390962 291
57 3300007788 Ga0099795_10083114 Ga0099795_100831142 291
58 3300009176 Ga0105242_10000464 Ga0105242_1000046414 291
59 3300009176 Ga0105242_10373540 Ga0105242_103735402 291
60 3300010159 Ga0099796_10029276 Ga0099796_100292761 291
61 3300013306 Ga0163162_10024414 Ga0163162_100244145 291
62 3300014326 Ga0157380_10092261 Ga0157380_100922612 291
63 3300025934 Ga0207686_10000090 Ga0207686_1000009027 291
64 3300026088 Ga0207641_10365789 Ga0207641_103657892 291
65 3300026118 Ga0207675_100008257 Ga0207675_1000082578 291
66 3300031251 Ga0265327_10012522 Ga0265327_100125227 291
67 3300031903 Ga0307407_10022282 Ga0307407_100222823 291
68 3300031995 Ga0307409_100147510 Ga0307409_1001475103 291
69 3300032005 Ga0307411_10057765 Ga0307411_100577652 291
70 3300035088 Ga0373940_0086129 Ga0373940_0086129_47_922 291
71 3300036401 Ga0373937_0224376 Ga0373937_0224376_455_1330 291
72 3300037068 Ga0373925_0286940 Ga0373925_0286940_179_1060 291
73 3300044673 Ga0453683_0007880 Ga0453683_0007880_307_1182 291
74 3300044712 Ga0453684_0002410 Ga0453684_0002410_2730_3605 291
75 3300044712 Ga0453684_0024335 Ga0453684_0024335_13_891 291
76 3300044712 Ga0453684_0126736 Ga0453684_0126736_611_1486 291
77 3300044712 Ga0453684_0143243 Ga0453684_0143243_815_1717 291
78 3300044712 Ga0453684_0148994 Ga0453684_0148994_826_1701 291
79 3300045051 Ga0451576_0278253 Ga0451576_0278253_414_1289 291
80 3300046475 Ga0495639_0042754 Ga0495639_0042754_1030_1905 291
81 3300049589 Ga0501073_0085140 Ga0501073_0085140_1267_2142 291
82 3300049593 Ga0501077_0009617 Ga0501077_0009617_921_1796 291
83 3300050494 nmdc:mga06z11_25665_c1 nmdc:mga06z11_25665_c1_1905_2780 291
84 3300050507 nmdc:mga05p37_86427_c1 nmdc:mga05p37_86427_c1_1706_2581 291
85 3300050510 nmdc:mga06r32_2851_c1 nmdc:mga06r32_2851_c1_3111_3986 291
86 3300050513 nmdc:mga0rr50_148504_c1 nmdc:mga0rr50_148504_c1_892_1767 291
87 3300050515 nmdc:mga0a205_220389_c1 nmdc:mga0a205_220389_c1_625_1500 291
88 3300005328 Ga0070676_10029323 Ga0070676_100293232 292
89 3300005355 Ga0070671_100016712 Ga0070671_1000167125 292
90 3300005367 Ga0070667_100015038 Ga0070667_1000150381 292
91 3300005444 Ga0070694_100010288 Ga0070694_1000102883 292
92 3300005617 Ga0068859_100600007 Ga0068859_1006000072 292
93 3300005842 Ga0068858_100142094 Ga0068858_1001420942 292
94 3300005985 Ga0081539_10001259 Ga0081539_1000125910 292
95 3300006048 Ga0075363_100092253 Ga0075363_1000922533 292
96 3300006237 Ga0097621_100190683 Ga0097621_1001906832 292
97 3300006852 Ga0075433_10328271 Ga0075433_103282711 292
98 3300006871 Ga0075434_100039280 Ga0075434_1000392803 292
99 3300006914 Ga0075436_100013728 Ga0075436_1000137282 292
100 3300006931 Ga0097620_100599999 Ga0097620_1005999992 292
101 3300009147 Ga0114129_10096235 Ga0114129_100962353 292
102 3300009148 Ga0105243_10441930 Ga0105243_104419301 292
103 3300009148 Ga0105243_10447392 Ga0105243_104473922 292
104 3300013308 Ga0157375_10141839 Ga0157375_101418392 292
105 3300017792 Ga0163161_10024219 Ga0163161_100242192 292
106 3300025224 Ga0209784_100041 Ga0209784_100041174 292
107 3300025907 Ga0207645_10036512 Ga0207645_100365122 292
108 3300025931 Ga0207644_10172559 Ga0207644_101725592 292
109 3300025940 Ga0207691_10064793 Ga0207691_100647932 292
110 3300028794 Ga0307515_10005687 Ga0307515_100056877 292
111 3300031238 Ga0265332_10000106 Ga0265332_1000010619 292
112 3300031239 Ga0265328_10004102 Ga0265328_100041023 292
113 3300031242 Ga0265329_10006546 Ga0265329_100065464 292
114 3300031247 Ga0265340_10080249 Ga0265340_100802492 292
115 3300031249 Ga0265339_10125825 Ga0265339_101258252 292
116 3300031250 Ga0265331_10000074 Ga0265331_1000007445 292
117 3300031251 Ga0265327_10092764 Ga0265327_100927642 292
118 3300031344 Ga0265316_10000037 Ga0265316_1000003745 292
119 3300031691 Ga0316579_10071395 Ga0316579_100713952 292
120 3300031711 Ga0265314_10000248 Ga0265314_1000024850 292
121 3300031712 Ga0265342_10052441 Ga0265342_100524412 292
122 3300031728 Ga0316578_10234090 Ga0316578_102340902 292
123 3300035398 Ga0316574_0021299 Ga0316574_0021299_459_1358 292
124 3300036647 Ga0316582_0143132 Ga0316582_0143132_11_898 292
125 3300038741 Ga0400488_12273 Ga0400488_12273_368_1261 292
126 3300044673 Ga0453683_0013790 Ga0453683_0013790_3482_4360 292
127 3300044673 Ga0453683_0114523 Ga0453683_0114523_43_921 292
128 3300044712 Ga0453684_0002362 Ga0453684_0002362_20212_21090 292
129 3300044712 Ga0453684_0419189 Ga0453684_0419189_60_938 292
130 3300044712 Ga0453684_0565136 Ga0453684_0565136_26_904 292
131 3300045051 Ga0451576_0001818 Ga0451576_0001818_28441_29319 292
132 3300048903 Ga0496100_0106507 Ga0496100_0106507_913_1800 292
133 3300048904 Ga0496101_0132299 Ga0496101_0132299_881_1759 292
134 3300048905 Ga0496102_0260584 Ga0496102_0260584_247_1134 292
135 3300050490 nmdc:mga03n38_173787_c1 nmdc:mga03n38_173787_c1_87_968 292
136 3300050507 nmdc:mga05p37_533214_c1 nmdc:mga05p37_533214_c1_413_1294 292
137 3300050507 nmdc:mga05p37_6031_c1 nmdc:mga05p37_6031_c1_985_1887 292
138 3300050512 nmdc:mga0n895_182235_c1 nmdc:mga0n895_182235_c1_647_1528 292
139 3300050513 nmdc:mga0rr50_145821_c1 nmdc:mga0rr50_145821_c1_34_915 292
140 3300050514 nmdc:mga08x19_91260_c1 nmdc:mga08x19_91260_c1_529_1410 292
141 3300050515 nmdc:mga0a205_133489_c1 nmdc:mga0a205_133489_c1_381_1262 292
142 3300005331 Ga0070670_100000025 Ga0070670_10000002554 293
143 3300005338 Ga0068868_100000159 Ga0068868_10000015930 293
144 3300005345 Ga0070692_10158121 Ga0070692_101581212 293
145 3300009098 Ga0105245_10000043 Ga0105245_1000004372 293
146 3300013308 Ga0157375_10000010 Ga0157375_10000010272 293
147 3300014969 Ga0157376_10000018 Ga0157376_10000018104 293
148 3300025916 Ga0207663_10015822 Ga0207663_100158222 293
149 3300025918 Ga0207662_10110458 Ga0207662_101104582 293
150 3300025925 Ga0207650_10000117 Ga0207650_1000011763 293
151 3300025927 Ga0207687_10000024 Ga0207687_10000024117 293
152 3300025928 Ga0207700_10454061 Ga0207700_104540612 293
153 3300025929 Ga0207664_10001053 Ga0207664_100010534 293
154 3300025949 Ga0207667_10219671 Ga0207667_102196713 293
155 3300028800 Ga0265338_10005693 Ga0265338_1000569311 293
156 3300030521 Ga0307511_10001596 Ga0307511_100015965 293
157 3300031241 Ga0265325_10000182 Ga0265325_100001825 293
158 3300031249 Ga0265339_10000130 Ga0265339_1000013032 293
159 3300031250 Ga0265331_10000148 Ga0265331_1000014837 293
160 3300031595 Ga0265313_10003124 Ga0265313_100031248 293
161 3300031711 Ga0265314_10000315 Ga0265314_1000031527 293
162 3300048909 Ga0496106_0042011 Ga0496106_0042011_303_1202 293
163 3300050512 nmdc:mga0n895_583777_c1 nmdc:mga0n895_583777_c1_217_1098 293
164 3300003771 Ga0055526_1030281 Ga0055526_10302812 294
165 3300003794 Ga0055531_10004683 Ga0055531_100046835 294
166 3300005293 Ga0065715_10000434 Ga0065715_100004344 294
167 3300005331 Ga0070670_100001473 Ga0070670_1000014738 294
168 3300005354 Ga0070675_100009516 Ga0070675_1000095166 294
169 3300005466 Ga0070685_10021906 Ga0070685_100219065 294
170 3300005546 Ga0070696_100141855 Ga0070696_1001418552 294
171 3300005548 Ga0070665_100004630 Ga0070665_1000046306 294
172 3300005616 Ga0068852_100187532 Ga0068852_1001875321 294
173 3300005840 Ga0068870_10006867 Ga0068870_100068673 294
174 3300009093 Ga0105240_10000859 Ga0105240_1000085919 294
175 3300009177 Ga0105248_10001745 Ga0105248_100017457 294
176 3300009551 Ga0105238_10027822 Ga0105238_100278226 294
177 3300010375 Ga0105239_10156810 Ga0105239_101568102 294
178 3300011119 Ga0105246_10077302 Ga0105246_100773022 294
179 3300013306 Ga0163162_10116491 Ga0163162_101164912 294
180 3300013308 Ga0157375_10047401 Ga0157375_100474014 294
181 3300014326 Ga0157380_10133061 Ga0157380_101330612 294
182 3300025292 Ga0209676_1015224 Ga0209676_10152242 294
183 3300025294 Ga0209025_1001373 Ga0209025_100137313 294
184 3300025304 Ga0209257_1000307 Ga0209257_100030785 294
185 3300025913 Ga0207695_10001410 Ga0207695_1000141019 294
186 3300025924 Ga0207694_10061833 Ga0207694_100618333 294
187 3300025938 Ga0207704_10110027 Ga0207704_101100272 294
188 3300025960 Ga0207651_10022871 Ga0207651_100228715 294
189 3300028379 Ga0268266_10006848 Ga0268266_100068482 294
190 3300031727 Ga0316576_10036768 Ga0316576_100367682 294
191 3300031901 Ga0307406_10071827 Ga0307406_100718272 294
192 3300036712 Ga0316584_0047120 Ga0316584_0047120_188_1117 294
193 3300041452 Ga0451793_0517678 Ga0451793_0517678_110_1051 294
194 3300042010 Ga0439452_004747 Ga0439452_004747_62_946 294
195 3300046615 Ga0495656_0000847 Ga0495656_0000847_4911_5795 294
196 3300047318 Ga0495636_0022181 Ga0495636_0022181_448_1332 294
197 3300048907 Ga0496104_0005923 Ga0496104_0005923_4403_5296 294
198 3300048908 Ga0496105_0021369 Ga0496105_0021369_1745_2638 294
199 3300048909 Ga0496106_0050513 Ga0496106_0050513_874_1767 294
200 3300048909 Ga0496106_0056351 Ga0496106_0056351_1519_2412 294
201 3300048910 Ga0496107_0109622 Ga0496107_0109622_90_983 294
202 3300048911 Ga0496108_0000877 Ga0496108_0000877_14003_14896 294
203 3300048912 Ga0496109_0001669 Ga0496109_0001669_15492_16385 294
204 3300048913 Ga0496110_0170170 Ga0496110_0170170_328_1221 294
205 3300048915 Ga0496112_0376183 Ga0496112_0376183_301_1194 294

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00483

NTP_transferase

Nucleotidyl transferase

41

279

0.99

PF12804

NTP_transf_3

MobA-like NTP transferase domain

42

237

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pkq-assembly3.cif.gz_D q83d variant of s. enterica rmla with dgtp 0.9911 3 288
3pkq-assembly2.cif.gz_B q83d variant of s. enterica rmla with dgtp 0.991 2 288
3pkq-assembly3.cif.gz_C q83d variant of s. enterica rmla with dgtp 0.9898 3 288
3pkq-assembly2.cif.gz_A q83d variant of s. enterica rmla with dgtp 0.9882 2 288
3pkp-assembly2.cif.gz_L q83s variant of s. enterica rmla with datp 0.9869 1 288
ID Description Score Start End Superfamily
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.976 1 293 3.90.550.10
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9695 1 293 3.90.550.10
4ecmA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.941 1 238 3.90.550.10
5z0aE01 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9177 4 226 3.90.550.10
af_Q58501_1_209_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9136 4 225 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A351VA12-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 1.001 4 114 GO:0008879
GO:0045226
AF-A0A382I4J4-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.999 4 128 GO:0008879
GO:0045226
AF-A0A5K1ISM2-F1-model_v4 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) (dTDP-glucose pyrophosphorylase) (dTDP-glucose synthase) 0.999 4 82 GO:0008879
GO:0045226
AF-A0A377XHL9-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9978 4 124 GO:0008879
GO:0045226
AF-A0A6I3TEG1-F1-model_v4 deleted 0.9978 16 128

Feature Viewer

pLDDT pTM Quality
93.15 0.92 High
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Predicted Structure (AlphaFold2)

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