F313919
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 205 | 135 | 184 | 435 |
Family's Representative Sequence
| Representative Sequence | 3300025913|Ga0207695_10017542|Ga0207695_100175425 |
| Length | 454 |
| Sequence | MSVLNSSTLKLQQLWQRFMDKQTVSIFWFRRDLRLDDNTGLYHALKGGKPVLPIFIFDKEILEKLEDKDDARVTFIYETIAALDKELHQHGSSLLVIYDTPARAWGKLLNDYNIAAVYTNHDYEPYAKERDEAVALILKKHNISFNTYKDQVIFDRDEVTKDDGKPYTVYTPYMRKWHQKLTPFYLKAYPNHKYFKNFYQTKSIPLPTLKSMGFEKSDLELPKIHYKELIADYAEKRDFPAIKGTTHIGLHLRFGTVSIRELARTSNTFNEKTWLNELVWREFYMMILYYFPHTADHAFRPEYDRINWNNDEKQFEAWCKGETGYPLVDAGMRELNATGYMHNRVRMVVASFLSKDLLIDWRWGERYFARKLLDYEMASNVGGWQWSAGSGTDAAPYFRIFNPESQMKKFDPKLEYVKKWVPEYADFSKYPKPIVDHAFARERCLKAFKEALSK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 2 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 3 | 2738541302 | Pedobacter sp. CF074 | Isolate | Unclassified |
| 4 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 5 | 2739367656 | Pedobacter sp. CF523 | Isolate | Unclassified |
| 6 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 7 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 8 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 9 | 2842909656 | Pedobacter sp. R-72393 | Isolate | Unclassified |
| 10 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 11 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 12 | 2857627736 | Pedobacter sp. R-74587 | Isolate | Unclassified |
| 13 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 14 | 2895498888 | Pseudoxanthomonas sp. SGD-10 | Isolate | Rhizosphere |
| 15 | 2904445276 | Pedobacter terrae 1734 | Isolate | Rhizosphere |
| 16 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 17 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 18 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 19 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 20 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 21 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 22 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 23 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 24 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 25 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 26 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 27 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 28 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 29 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 30 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 31 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 32 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 33 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 34 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 35 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 42 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 43 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 45 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 46 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 47 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 48 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 49 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 51 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 52 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 67 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 68 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 69 | 3300015682 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 | Metagenome | Rhizosphere |
| 70 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 71 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 74 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 75 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 76 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 77 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 78 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 79 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 80 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 81 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 82 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 101 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 102 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 103 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 104 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 105 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 106 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 107 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 108 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 109 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 110 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 111 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 112 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 113 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 131 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 132 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 133 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 134 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 135 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.76 |
| Metatranscriptomes | 0 |
| Isolates | 10.24 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 13.17 |
| Nodule | 0 |
| Rhizoplane | 0.49 |
| Rhizosphere | 76.59 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.76 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24739J22299_10009119 | 3300001989 | Bacteria | 3700 |
| 2 | JGI24735J21928_10000003 | 3300002067 | Bacteria | 385983 |
| 3 | JGI25162J39368_1000039 | 3300002737 | Bacteria | 175976 |
| 4 | JGI25152J39213_1005850 | 3300002773 | Bacteria | 3482 |
| 5 | JGI25150J39212_1000003 | 3300002774 | Bacteria | 508651 |
| 6 | JGI25151J46595_10000002 | 3300003187 | Bacteria | 731381 |
| 7 | JGI25153J46596_10000030 | 3300003215 | Bacteria | 200879 |
| 8 | rootH1_10081745 | 3300003316 | Bacteria | 11447 |
| 9 | rootH1_10083589 | 3300003316 | Bacteria | 5918 |
| 10 | rootH2_10022000 | 3300003320 | Bacteria | 16585 |
| 11 | rootH1_10001800 | 3300003323 | Bacteria | 72551 |
| 12 | rootH1_10051067 | 3300003323 | Bacteria | 14425 |
| 13 | Ga0055536_1000137 | 3300003781 | Bacteria | 62695 |
| 14 | Ga0055530_10001074 | 3300003791 | Bacteria | 21509 |
| 15 | Ga0065714_10065216 | 3300005288 | Bacteria | 11808 |
| 16 | Ga0065714_10075432 | 3300005288 | Bacteria | 2908 |
| 17 | Ga0070658_10000027 | 3300005327 | Bacteria | 164254 |
| 18 | Ga0070658_10023604 | 3300005327 | Bacteria | 4935 |
| 19 | Ga0070658_10243263 | 3300005327 | Bacteria | 1525 |
| 20 | Ga0070676_10000794 | 3300005328 | Bacteria | 15592 |
| 21 | Ga0070660_100011677 | 3300005339 | Bacteria | 6253 |
| 22 | Ga0070659_100000120 | 3300005366 | Bacteria | 59172 |
| 23 | Ga0070678_100036675 | 3300005456 | Bacteria | 3434 |
| 24 | Ga0070662_100000281 | 3300005457 | Bacteria | 30079 |
| 25 | Ga0068867_100002773 | 3300005459 | Bacteria | 12340 |
| 26 | Ga0068853_100026193 | 3300005539 | Bacteria | 4896 |
| 27 | Ga0070665_100000178 | 3300005548 | Bacteria | 113002 |
| 28 | Ga0068855_100000149 | 3300005563 | Bacteria | 89273 |
| 29 | Ga0068855_100000311 | 3300005563 | Bacteria | 60403 |
| 30 | Ga0068855_100017726 | 3300005563 | Bacteria | 8561 |
| 31 | Ga0068855_100059602 | 3300005563 | Bacteria | 4466 |
| 32 | Ga0068854_100064173 | 3300005578 | Bacteria | 2668 |
| 33 | Ga0068856_100000040 | 3300005614 | Bacteria | 114443 |
| 34 | Ga0068856_100069805 | 3300005614 | Bacteria | 3474 |
| 35 | Ga0068852_100000732 | 3300005616 | Bacteria | 21522 |
| 36 | Ga0075366_10000298 | 3300006195 | Bacteria | 22373 |
| 37 | Ga0097621_100000917 | 3300006237 | Bacteria | 20622 |
| 38 | Ga0068871_100001037 | 3300006358 | Bacteria | 18605 |
| 39 | Ga0068865_100000129 | 3300006881 | Bacteria | 39057 |
| 40 | Ga0105244_10012431 | 3300009036 | Bacteria | 5030 |
| 41 | Ga0105240_10004547 | 3300009093 | Bacteria | 21059 |
| 42 | Ga0105240_10006987 | 3300009093 | Bacteria | 16484 |
| 43 | Ga0105240_10024114 | 3300009093 | Bacteria | 8030 |
| 44 | Ga0105240_10361771 | 3300009093 | Bacteria | 1643 |
| 45 | Ga0105241_10001900 | 3300009174 | Bacteria | 15819 |
| 46 | Ga0105242_10050022 | 3300009176 | Bacteria | 3402 |
| 47 | Ga0105237_10000109 | 3300009545 | Bacteria | 115699 |
| 48 | Ga0105237_10001397 | 3300009545 | Bacteria | 31884 |
| 49 | Ga0105237_10003593 | 3300009545 | Bacteria | 18344 |
| 50 | Ga0105237_10003701 | 3300009545 | Bacteria | 18025 |
| 51 | Ga0105237_10012380 | 3300009545 | Bacteria | 8990 |
| 52 | Ga0105237_10015395 | 3300009545 | Bacteria | 7961 |
| 53 | Ga0105237_10016530 | 3300009545 | Bacteria | 7666 |
| 54 | Ga0105237_10053564 | 3300009545 | Bacteria | 4046 |
| 55 | Ga0105238_10002422 | 3300009551 | Bacteria | 18713 |
| 56 | Ga0105238_10071651 | 3300009551 | Bacteria | 3463 |
| 57 | Ga0105239_10000007 | 3300010375 | Bacteria | 385297 |
| 58 | Ga0105239_10000015 | 3300010375 | Bacteria | 319892 |
| 59 | Ga0105239_10000447 | 3300010375 | Bacteria | 60232 |
| 60 | Ga0105239_10001931 | 3300010375 | Bacteria | 27052 |
| 61 | Ga0105239_10001947 | 3300010375 | Bacteria | 26935 |
| 62 | Ga0105239_10003125 | 3300010375 | Bacteria | 20554 |
| 63 | Ga0105239_10079433 | 3300010375 | Bacteria | 3610 |
| 64 | Ga0157371_10000143 | 3300013102 | Bacteria | 103796 |
| 65 | Ga0157371_10002046 | 3300013102 | Bacteria | 19878 |
| 66 | Ga0157370_10000125 | 3300013104 | Bacteria | 91078 |
| 67 | Ga0157370_10010985 | 3300013104 | Bacteria | 9496 |
| 68 | Ga0157370_10036010 | 3300013104 | Bacteria | 4806 |
| 69 | Ga0157370_10070444 | 3300013104 | Bacteria | 3300 |
| 70 | Ga0157369_10000023 | 3300013105 | Bacteria | 226955 |
| 71 | Ga0157369_10033222 | 3300013105 | Bacteria | 5671 |
| 72 | Ga0157374_10002208 | 3300013296 | Bacteria | 16412 |
| 73 | Ga0157374_10029223 | 3300013296 | Bacteria | 4988 |
| 74 | Ga0157374_10030726 | 3300013296 | Bacteria | 4880 |
| 75 | Ga0157378_10247650 | 3300013297 | Bacteria | 1705 |
| 76 | Ga0163162_10000008 | 3300013306 | Bacteria | 316194 |
| 77 | Ga0163162_10000036 | 3300013306 | Bacteria | 144093 |
| 78 | Ga0163162_10069349 | 3300013306 | Bacteria | 3577 |
| 79 | Ga0163162_10105949 | 3300013306 | Bacteria | 2906 |
| 80 | Ga0157372_10003960 | 3300013307 | Bacteria | 15910 |
| 81 | Ga0157372_10007888 | 3300013307 | Bacteria | 11315 |
| 82 | Ga0182008_10000306 | 3300014497 | Bacteria | 38394 |
| 83 | Ga0182006_1000064 | 3300015261 | Bacteria | 153418 |
| 84 | Ga0182006_1000089 | 3300015261 | Bacteria | 110375 |
| 85 | Ga0182006_1003902 | 3300015261 | Bacteria | 7469 |
| 86 | Ga0182007_10000038 | 3300015262 | Bacteria | 123202 |
| 87 | Ga0183373_1009 | 3300015682 | Bacteria | 210158 |
| 88 | Ga0163161_10000047 | 3300017792 | Bacteria | 126839 |
| 89 | Ga0163161_10000090 | 3300017792 | Bacteria | 90964 |
| 90 | Ga0207427_100225 | 3300025231 | Bacteria | 48238 |
| 91 | Ga0209437_100112 | 3300025233 | Bacteria | 214292 |
| 92 | Ga0209437_100135 | 3300025233 | Bacteria | 176455 |
| 93 | Ga0207425_1000003 | 3300025245 | Bacteria | 1145342 |
| 94 | Ga0209026_1000251 | 3300025250 | Bacteria | 67956 |
| 95 | Ga0209026_1001764 | 3300025250 | Bacteria | 8968 |
| 96 | Ga0209129_1000014 | 3300025258 | Bacteria | 509018 |
| 97 | Ga0209233_1000126 | 3300025261 | Bacteria | 214298 |
| 98 | Ga0209233_1005628 | 3300025261 | Bacteria | 4142 |
| 99 | Ga0209455_1001156 | 3300025272 | Bacteria | 12733 |
| 100 | Ga0209676_1000009 | 3300025292 | Bacteria | 981719 |
| 101 | Ga0209025_1000007 | 3300025294 | Bacteria | 1145109 |
| 102 | Ga0209758_1000012 | 3300025297 | Bacteria | 949866 |
| 103 | Ga0209050_1000190 | 3300025298 | Bacteria | 138532 |
| 104 | Ga0207647_10000079 | 3300025904 | Bacteria | 72325 |
| 105 | Ga0207645_10000099 | 3300025907 | Bacteria | 64087 |
| 106 | Ga0207705_10000053 | 3300025909 | Bacteria | 162124 |
| 107 | Ga0207705_10197623 | 3300025909 | Bacteria | 1523 |
| 108 | Ga0207654_10054833 | 3300025911 | Bacteria | 2305 |
| 109 | Ga0207695_10000142 | 3300025913 | Bacteria | 214715 |
| 110 | Ga0207695_10003112 | 3300025913 | Bacteria | 23732 |
| 111 | Ga0207695_10003765 | 3300025913 | Bacteria | 21051 |
| 112 | Ga0207695_10017542 | 3300025913 | Bacteria | 8325 |
| 113 | Ga0207695_10154034 | 3300025913 | Bacteria | 2234 |
| 114 | Ga0207671_10000110 | 3300025914 | Bacteria | 126480 |
| 115 | Ga0207671_10001371 | 3300025914 | Bacteria | 28336 |
| 116 | Ga0207671_10007754 | 3300025914 | Bacteria | 9245 |
| 117 | Ga0207671_10011452 | 3300025914 | Bacteria | 7220 |
| 118 | Ga0207671_10013521 | 3300025914 | Bacteria | 6498 |
| 119 | Ga0207671_10018517 | 3300025914 | Bacteria | 5339 |
| 120 | Ga0207657_10012744 | 3300025919 | Bacteria | 8280 |
| 121 | Ga0207694_10013021 | 3300025924 | Bacteria | 6262 |
| 122 | Ga0207690_10000133 | 3300025932 | Bacteria | 60426 |
| 123 | Ga0207706_10000138 | 3300025933 | Bacteria | 79643 |
| 124 | Ga0207704_10000015 | 3300025938 | Bacteria | 163572 |
| 125 | Ga0207667_10000030 | 3300025949 | Bacteria | 327226 |
| 126 | Ga0207667_10003564 | 3300025949 | Bacteria | 19241 |
| 127 | Ga0207667_10007795 | 3300025949 | Bacteria | 12798 |
| 128 | Ga0207667_10017845 | 3300025949 | Bacteria | 7978 |
| 129 | Ga0207667_10071636 | 3300025949 | Bacteria | 3603 |
| 130 | Ga0207640_10068345 | 3300025981 | Bacteria | 2381 |
| 131 | Ga0207639_10018281 | 3300026041 | Bacteria | 4980 |
| 132 | Ga0207702_10000042 | 3300026078 | Bacteria | 150673 |
| 133 | Ga0207702_10010264 | 3300026078 | Bacteria | 7846 |
| 134 | Ga0207648_10000888 | 3300026089 | Bacteria | 33713 |
| 135 | Ga0207683_10152985 | 3300026121 | Bacteria | 2083 |
| 136 | Ga0268266_10000098 | 3300028379 | Bacteria | 182784 |
| 137 | Ga0307517_10012522 | 3300028786 | Bacteria | 11628 |
| 138 | Ga0307515_10001900 | 3300028794 | Bacteria | 46488 |
| 139 | Ga0265338_10048244 | 3300028800 | Bacteria | 3877 |
| 140 | Ga0307405_10000022 | 3300031731 | Bacteria | 148522 |
| 141 | Ga0307407_10000012 | 3300031903 | Bacteria | 172479 |
| 142 | Ga0307409_100143490 | 3300031995 | Bacteria | 2061 |
| 143 | Ga0307416_100000024 | 3300032002 | Bacteria | 186924 |
| 144 | Ga0307414_10000327 | 3300032004 | Bacteria | 27217 |
| 145 | Ga0307510_10005768 | 3300033180 | Bacteria | 14760 |
| 146 | Ga0395899_0000034 | 3300037312 | Bacteria | 302623 |
| 147 | Ga0395900_0001838 | 3300037418 | Bacteria | 24186 |
| 148 | Ga0395900_0031324 | 3300037418 | Bacteria | 5463 |
| 149 | Ga0395905_0058048 | 3300037471 | Bacteria | 3619 |
| 150 | Ga0436361_0250165 | 3300039447 | Bacteria | 5870 |
| 151 | Ga0495638_0078406 | 3300046460 | Bacteria | 2010 |
| 152 | Ga0495585_0000302 | 3300046492 | Bacteria | 49282 |
| 153 | Ga0495606_0012583 | 3300046507 | Bacteria | 6771 |
| 154 | Ga0495606_0013963 | 3300046507 | Bacteria | 6299 |
| 155 | Ga0495606_0091100 | 3300046507 | Bacteria | 1875 |
| 156 | Ga0495610_0000144 | 3300046512 | Bacteria | 78253 |
| 157 | Ga0495610_0000215 | 3300046512 | Bacteria | 62664 |
| 158 | Ga0495616_0007206 | 3300046513 | Bacteria | 6666 |
| 159 | Ga0495616_0011623 | 3300046513 | Bacteria | 5036 |
| 160 | Ga0495644_0006021 | 3300046523 | Bacteria | 4725 |
| 161 | Ga0495648_0015512 | 3300046524 | Bacteria | 5530 |
| 162 | Ga0495622_0093865 | 3300046557 | Bacteria | 1377 |
| 163 | Ga0495633_0000157 | 3300046558 | Bacteria | 89236 |
| 164 | Ga0495625_0000049 | 3300046660 | Bacteria | 197646 |
| 165 | Ga0495625_0000548 | 3300046660 | Bacteria | 55064 |
| 166 | Ga0495625_0003567 | 3300046660 | Bacteria | 15347 |
| 167 | Ga0495661_0000134 | 3300046665 | Bacteria | 87487 |
| 168 | Ga0495661_0006193 | 3300046665 | Bacteria | 8421 |
| 169 | Ga0495649_0000014 | 3300046694 | Bacteria | 287408 |
| 170 | Ga0495683_0052084 | 3300047323 | Unclassified | 2044 |
| 171 | Ga0495687_012896 | 3300047443 | Bacteria | 4392 |
| 172 | Ga0495673_0038692 | 3300047469 | Bacteria | 2168 |
| 173 | Ga0495686_0000419 | 3300047472 | Bacteria | 66923 |
| 174 | Ga0495686_0011978 | 3300047472 | Bacteria | 6094 |
| 175 | Ga0495686_0019622 | 3300047472 | Bacteria | 4517 |
| 176 | Ga0495614_0048053 | 3300048089 | Bacteria | 1830 |
| 177 | Ga0501223_001191 | 3300049663 | Bacteria | 6106 |
| 178 | nmdc:mga0k408_19441_c1 | 3300050493 | Bacteria | 3797 |
| 179 | nmdc:mga0k408_5863_c1 | 3300050493 | Bacteria | 6547 |
| 180 | Ga0500635_0000470 | 3300053080 | Bacteria | 11444 |
| 181 | Ga0500608_001588 | 3300053122 | Bacteria | 8156 |
| 182 | Ga0500608_040479 | 3300053122 | Bacteria | 2234 |
| 183 | Ga0500618_000005 | 3300053125 | Bacteria | 253092 |
| 184 | Ga0500622_0001678 | 3300053156 | Bacteria | 17257 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300053122 | Ga0500608_001588 | Ga0500608_001588_4518_5831 | 404 |
| 2 | 3300005327 | Ga0070658_10023604 | Ga0070658_100236044 | 406 |
| 3 | 3300033180 | Ga0307510_10005768 | Ga0307510_100057686 | 408 |
| 4 | 3300047323 | Ga0495683_0052084 | Ga0495683_0052084_17_1330 | 408 |
| 5 | 3300005563 | Ga0068855_100000149 | Ga0068855_10000014964 | 419 |
| 6 | 3300025949 | Ga0207667_10003564 | Ga0207667_100035642 | 419 |
| 7 | 3300013306 | Ga0163162_10069349 | Ga0163162_100693492 | 421 |
| 8 | 3300015261 | Ga0182006_1000089 | Ga0182006_100008932 | 421 |
| 9 | 3300046492 | Ga0495585_0000302 | Ga0495585_0000302_44354_45667 | 421 |
| 10 | 3300009545 | Ga0105237_10015395 | Ga0105237_100153956 | 422 |
| 11 | 3300025914 | Ga0207671_10007754 | Ga0207671_100077543 | 422 |
| 12 | 3300046512 | Ga0495610_0000215 | Ga0495610_0000215_43158_44459 | 422 |
| 13 | 3300005288 | Ga0065714_10065216 | Ga0065714_100652167 | 423 |
| 14 | 3300009036 | Ga0105244_10012431 | Ga0105244_100124313 | 423 |
| 15 | 3300009551 | Ga0105238_10071651 | Ga0105238_100716513 | 423 |
| 16 | 3300013306 | Ga0163162_10000036 | Ga0163162_1000003665 | 423 |
| 17 | 3300025913 | Ga0207695_10154034 | Ga0207695_101540342 | 423 |
| 18 | 3300013104 | Ga0157370_10070444 | Ga0157370_100704442 | 424 |
| 19 | 3300014497 | Ga0182008_10000306 | Ga0182008_1000030619 | 424 |
| 20 | 3300009093 | Ga0105240_10361771 | Ga0105240_103617712 | 425 |
| 21 | 3300025250 | Ga0209026_1000251 | Ga0209026_100025132 | 425 |
| 22 | 3300025261 | Ga0209233_1005628 | Ga0209233_10056284 | 425 |
| 23 | 3300015682 | Ga0183373_1009 | Ga0183373_1009127 | 426 |
| 24 | 3300046507 | Ga0495606_0012583 | Ga0495606_0012583_5081_6382 | 426 |
| 25 | iso_pu_bacteria | 2818991437 | 2819545707 | 426 |
| 26 | iso_pu_bacteria | 2849281842 | 2849284906 | 426 |
| 27 | iso_pu_bacteria | 2904445276 | 2904448391 | 426 |
| 28 | iso_pu_bacteria | 2585427687 | 2586209032 | 427 |
| 29 | iso_pu_bacteria | 2739367651 | 2739587808 | 427 |
| 30 | iso_pu_bacteria | 2739367663 | 2739646524 | 427 |
| 31 | iso_pu_bacteria | 2857627736 | 2857629872 | 427 |
| 32 | iso_pu_bacteria | 2945997725 | 2945998760 | 427 |
| 33 | iso_pu_bacteria | 2954016120 | 2954021207 | 427 |
| 34 | 3300015261 | Ga0182006_1000064 | Ga0182006_100006474 | 430 |
| 35 | 3300046512 | Ga0495610_0000144 | Ga0495610_0000144_76488_77783 | 430 |
| 36 | iso_pu_bacteria | 2895498888 | 2895501027 | 430 |
| 37 | 3300013102 | Ga0157371_10000143 | Ga0157371_1000014320 | 431 |
| 38 | 3300013105 | Ga0157369_10000023 | Ga0157369_10000023140 | 431 |
| 39 | 3300015262 | Ga0182007_10000038 | Ga0182007_1000003837 | 431 |
| 40 | 3300017792 | Ga0163161_10000047 | Ga0163161_1000004736 | 431 |
| 41 | 3300031903 | Ga0307407_10000012 | Ga0307407_1000001256 | 431 |
| 42 | 3300031995 | Ga0307409_100143490 | Ga0307409_1001434902 | 431 |
| 43 | 3300032002 | Ga0307416_100000024 | Ga0307416_10000002469 | 431 |
| 44 | iso_pu_bacteria | 2842909656 | 2842912103 | 431 |
| 45 | 3300002773 | JGI25152J39213_1005850 | JGI25152J39213_10058504 | 432 |
| 46 | 3300002774 | JGI25150J39212_1000003 | JGI25150J39212_100000398 | 432 |
| 47 | 3300003187 | JGI25151J46595_10000002 | JGI25151J46595_1000000298 | 432 |
| 48 | 3300003215 | JGI25153J46596_10000030 | JGI25153J46596_1000003088 | 432 |
| 49 | 3300003781 | Ga0055536_1000137 | Ga0055536_100013728 | 432 |
| 50 | 3300003791 | Ga0055530_10001074 | Ga0055530_100010747 | 432 |
| 51 | 3300013104 | Ga0157370_10000125 | Ga0157370_1000012557 | 432 |
| 52 | 3300013104 | Ga0157370_10010985 | Ga0157370_100109855 | 432 |
| 53 | 3300025245 | Ga0207425_1000003 | Ga0207425_1000003738 | 432 |
| 54 | 3300025258 | Ga0209129_1000014 | Ga0209129_100001495 | 432 |
| 55 | 3300025292 | Ga0209676_1000009 | Ga0209676_1000009574 | 432 |
| 56 | 3300025294 | Ga0209025_1000007 | Ga0209025_1000007737 | 432 |
| 57 | 3300025297 | Ga0209758_1000012 | Ga0209758_1000012738 | 432 |
| 58 | 3300025298 | Ga0209050_1000190 | Ga0209050_100019083 | 432 |
| 59 | 3300032004 | Ga0307414_10000327 | Ga0307414_1000032718 | 432 |
| 60 | 3300049663 | Ga0501223_001191 | Ga0501223_001191_2199_3506 | 432 |
| 61 | iso_pu_bacteria | 2842722452 | 2842724404 | 432 |
| 62 | 3300015261 | Ga0182006_1003902 | Ga0182006_10039025 | 433 |
| 63 | iso_pu_bacteria | 2599185184 | 2599479728 | 433 |
| 64 | iso_pu_bacteria | 2739367656 | 2739614505 | 433 |
| 65 | iso_pu_bacteria | 2852623160 | 2852624928 | 433 |
| 66 | iso_pu_bacteria | 2884933994 | 2884936176 | 433 |
| 67 | iso_pu_bacteria | 2919437846 | 2919437957 | 433 |
| 68 | iso_pu_bacteria | 2928078545 | 2928083717 | 433 |
| 69 | iso_pu_bacteria | 2928147474 | 2928152156 | 433 |
| 70 | iso_pu_bacteria | 2932082852 | 2932084719 | 433 |
| 71 | 3300005339 | Ga0070660_100011677 | Ga0070660_1000116774 | 434 |
| 72 | 3300005366 | Ga0070659_100000120 | Ga0070659_10000012057 | 434 |
| 73 | 3300017792 | Ga0163161_10000090 | Ga0163161_1000009054 | 434 |
| 74 | 3300025932 | Ga0207690_10000133 | Ga0207690_1000013324 | 434 |
| 75 | 3300031731 | Ga0307405_10000022 | Ga0307405_1000002262 | 434 |
| 76 | iso_pu_bacteria | 2738541302 | 2738856379 | 434 |
| 77 | 3300005327 | Ga0070658_10243263 | Ga0070658_102432632 | 435 |
| 78 | 3300010375 | Ga0105239_10000015 | Ga0105239_10000015152 | 435 |
| 79 | 3300013102 | Ga0157371_10002046 | Ga0157371_100020466 | 435 |
| 80 | 3300013307 | Ga0157372_10003960 | Ga0157372_100039602 | 435 |
| 81 | 3300025250 | Ga0209026_1001764 | Ga0209026_10017641 | 435 |
| 82 | 3300025909 | Ga0207705_10197623 | Ga0207705_101976232 | 435 |
| 83 | 3300047472 | Ga0495686_0011978 | Ga0495686_0011978_2152_3459 | 435 |
| 84 | 3300053080 | Ga0500635_0000470 | Ga0500635_0000470_2906_4213 | 435 |
| 85 | 3300005328 | Ga0070676_10000794 | Ga0070676_100007943 | 436 |
| 86 | 3300005456 | Ga0070678_100036675 | Ga0070678_1000366752 | 436 |
| 87 | 3300005457 | Ga0070662_100000281 | Ga0070662_1000002817 | 436 |
| 88 | 3300005459 | Ga0068867_100002773 | Ga0068867_1000027739 | 436 |
| 89 | 3300005539 | Ga0068853_100026193 | Ga0068853_1000261932 | 436 |
| 90 | 3300005548 | Ga0070665_100000178 | Ga0070665_1000001789 | 436 |
| 91 | 3300005616 | Ga0068852_100000732 | Ga0068852_10000073212 | 436 |
| 92 | 3300006237 | Ga0097621_100000917 | Ga0097621_10000091711 | 436 |
| 93 | 3300006358 | Ga0068871_100001037 | Ga0068871_10000103711 | 436 |
| 94 | 3300006881 | Ga0068865_100000129 | Ga0068865_10000012928 | 436 |
| 95 | 3300009093 | Ga0105240_10004547 | Ga0105240_1000454715 | 436 |
| 96 | 3300009093 | Ga0105240_10006987 | Ga0105240_100069879 | 436 |
| 97 | 3300009093 | Ga0105240_10024114 | Ga0105240_100241145 | 436 |
| 98 | 3300009174 | Ga0105241_10001900 | Ga0105241_100019005 | 436 |
| 99 | 3300009176 | Ga0105242_10050022 | Ga0105242_100500223 | 436 |
| 100 | 3300009545 | Ga0105237_10003701 | Ga0105237_1000370110 | 436 |
| 101 | 3300009545 | Ga0105237_10012380 | Ga0105237_100123803 | 436 |
| 102 | 3300009551 | Ga0105238_10002422 | Ga0105238_100024225 | 436 |
| 103 | 3300010375 | Ga0105239_10000007 | Ga0105239_10000007275 | 436 |
| 104 | 3300010375 | Ga0105239_10001931 | Ga0105239_1000193116 | 436 |
| 105 | 3300013104 | Ga0157370_10036010 | Ga0157370_100360105 | 436 |
| 106 | 3300013296 | Ga0157374_10002208 | Ga0157374_100022087 | 436 |
| 107 | 3300013296 | Ga0157374_10030726 | Ga0157374_100307262 | 436 |
| 108 | 3300013297 | Ga0157378_10247650 | Ga0157378_102476501 | 436 |
| 109 | 3300013306 | Ga0163162_10000008 | Ga0163162_10000008180 | 436 |
| 110 | 3300025272 | Ga0209455_1001156 | Ga0209455_10011566 | 436 |
| 111 | 3300025907 | Ga0207645_10000099 | Ga0207645_1000009915 | 436 |
| 112 | 3300025911 | Ga0207654_10054833 | Ga0207654_100548332 | 436 |
| 113 | 3300025913 | Ga0207695_10003112 | Ga0207695_100031126 | 436 |
| 114 | 3300025913 | Ga0207695_10003765 | Ga0207695_1000376510 | 436 |
| 115 | 3300025913 | Ga0207695_10017542 | Ga0207695_100175425 | 436 |
| 116 | 3300025914 | Ga0207671_10018517 | Ga0207671_100185176 | 436 |
| 117 | 3300025924 | Ga0207694_10013021 | Ga0207694_100130216 | 436 |
| 118 | 3300025933 | Ga0207706_10000138 | Ga0207706_1000013840 | 436 |
| 119 | 3300025938 | Ga0207704_10000015 | Ga0207704_1000001559 | 436 |
| 120 | 3300025949 | Ga0207667_10007795 | Ga0207667_1000779510 | 436 |
| 121 | 3300026041 | Ga0207639_10018281 | Ga0207639_100182815 | 436 |
| 122 | 3300026089 | Ga0207648_10000888 | Ga0207648_1000088816 | 436 |
| 123 | 3300026121 | Ga0207683_10152985 | Ga0207683_101529852 | 436 |
| 124 | 3300028379 | Ga0268266_10000098 | Ga0268266_1000009855 | 436 |
| 125 | 3300028786 | Ga0307517_10012522 | Ga0307517_100125224 | 436 |
| 126 | 3300037418 | Ga0395900_0001838 | Ga0395900_0001838_7599_8909 | 436 |
| 127 | 3300037418 | Ga0395900_0031324 | Ga0395900_0031324_1188_2501 | 436 |
| 128 | 3300037471 | Ga0395905_0058048 | Ga0395905_0058048_398_1711 | 436 |
| 129 | 3300039447 | Ga0436361_0250165 | Ga0436361_0250165_749_2062 | 436 |
| 130 | 3300046507 | Ga0495606_0013963 | Ga0495606_0013963_2283_3593 | 436 |
| 131 | 3300053156 | Ga0500622_0001678 | Ga0500622_0001678_4334_5644 | 436 |
| 132 | 3300001989 | JGI24739J22299_10009119 | JGI24739J22299_100091193 | 437 |
| 133 | 3300002067 | JGI24735J21928_10000003 | JGI24735J21928_1000000336 | 437 |
| 134 | 3300002737 | JGI25162J39368_1000039 | JGI25162J39368_100003936 | 437 |
| 135 | 3300003316 | rootH1_10081745 | rootH1_100817457 | 437 |
| 136 | 3300003316 | rootH1_10083589 | rootH1_100835893 | 437 |
| 137 | 3300003320 | rootH2_10022000 | rootH2_1002200011 | 437 |
| 138 | 3300003323 | rootH1_10001800 | rootH1_1000180011 | 437 |
| 139 | 3300003323 | rootH1_10051067 | rootH1_100510675 | 437 |
| 140 | 3300005288 | Ga0065714_10075432 | Ga0065714_100754322 | 437 |
| 141 | 3300005327 | Ga0070658_10000027 | Ga0070658_1000002772 | 437 |
| 142 | 3300005563 | Ga0068855_100000311 | Ga0068855_10000031121 | 437 |
| 143 | 3300005563 | Ga0068855_100017726 | Ga0068855_1000177269 | 437 |
| 144 | 3300005563 | Ga0068855_100059602 | Ga0068855_1000596023 | 437 |
| 145 | 3300005578 | Ga0068854_100064173 | Ga0068854_1000641732 | 437 |
| 146 | 3300005614 | Ga0068856_100000040 | Ga0068856_100000040111 | 437 |
| 147 | 3300005614 | Ga0068856_100069805 | Ga0068856_1000698053 | 437 |
| 148 | 3300006195 | Ga0075366_10000298 | Ga0075366_1000029818 | 437 |
| 149 | 3300009545 | Ga0105237_10000109 | Ga0105237_1000010910 | 437 |
| 150 | 3300009545 | Ga0105237_10001397 | Ga0105237_1000139713 | 437 |
| 151 | 3300009545 | Ga0105237_10003593 | Ga0105237_100035937 | 437 |
| 152 | 3300009545 | Ga0105237_10016530 | Ga0105237_100165302 | 437 |
| 153 | 3300009545 | Ga0105237_10053564 | Ga0105237_100535643 | 437 |
| 154 | 3300010375 | Ga0105239_10000447 | Ga0105239_1000044743 | 437 |
| 155 | 3300010375 | Ga0105239_10001947 | Ga0105239_100019478 | 437 |
| 156 | 3300010375 | Ga0105239_10003125 | Ga0105239_1000312512 | 437 |
| 157 | 3300010375 | Ga0105239_10079433 | Ga0105239_100794335 | 437 |
| 158 | 3300013105 | Ga0157369_10033222 | Ga0157369_100332226 | 437 |
| 159 | 3300013296 | Ga0157374_10029223 | Ga0157374_100292235 | 437 |
| 160 | 3300013306 | Ga0163162_10105949 | Ga0163162_101059492 | 437 |
| 161 | 3300013307 | Ga0157372_10007888 | Ga0157372_100078887 | 437 |
| 162 | 3300025231 | Ga0207427_100225 | Ga0207427_10022527 | 437 |
| 163 | 3300025233 | Ga0209437_100112 | Ga0209437_10011233 | 437 |
| 164 | 3300025233 | Ga0209437_100135 | Ga0209437_100135145 | 437 |
| 165 | 3300025261 | Ga0209233_1000126 | Ga0209233_1000126148 | 437 |
| 166 | 3300025904 | Ga0207647_10000079 | Ga0207647_100000798 | 437 |
| 167 | 3300025909 | Ga0207705_10000053 | Ga0207705_1000005372 | 437 |
| 168 | 3300025913 | Ga0207695_10000142 | Ga0207695_10000142135 | 437 |
| 169 | 3300025914 | Ga0207671_10000110 | Ga0207671_10000110116 | 437 |
| 170 | 3300025914 | Ga0207671_10001371 | Ga0207671_1000137119 | 437 |
| 171 | 3300025914 | Ga0207671_10011452 | Ga0207671_100114524 | 437 |
| 172 | 3300025914 | Ga0207671_10013521 | Ga0207671_100135213 | 437 |
| 173 | 3300025919 | Ga0207657_10012744 | Ga0207657_100127445 | 437 |
| 174 | 3300025949 | Ga0207667_10000030 | Ga0207667_10000030128 | 437 |
| 175 | 3300025949 | Ga0207667_10017845 | Ga0207667_100178457 | 437 |
| 176 | 3300025949 | Ga0207667_10071636 | Ga0207667_100716363 | 437 |
| 177 | 3300025981 | Ga0207640_10068345 | Ga0207640_100683452 | 437 |
| 178 | 3300026078 | Ga0207702_10000042 | Ga0207702_1000004283 | 437 |
| 179 | 3300026078 | Ga0207702_10010264 | Ga0207702_100102643 | 437 |
| 180 | 3300028794 | Ga0307515_10001900 | Ga0307515_1000190031 | 437 |
| 181 | 3300028800 | Ga0265338_10048244 | Ga0265338_100482443 | 437 |
| 182 | 3300037312 | Ga0395899_0000034 | Ga0395899_0000034_85288_86601 | 437 |
| 183 | 3300046460 | Ga0495638_0078406 | Ga0495638_0078406_447_1760 | 437 |
| 184 | 3300046507 | Ga0495606_0091100 | Ga0495606_0091100_326_1639 | 437 |
| 185 | 3300046513 | Ga0495616_0007206 | Ga0495616_0007206_2985_4298 | 437 |
| 186 | 3300046513 | Ga0495616_0011623 | Ga0495616_0011623_2365_3678 | 437 |
| 187 | 3300046523 | Ga0495644_0006021 | Ga0495644_0006021_2643_3956 | 437 |
| 188 | 3300046524 | Ga0495648_0015512 | Ga0495648_0015512_139_1452 | 437 |
| 189 | 3300046557 | Ga0495622_0093865 | Ga0495622_0093865_24_1337 | 437 |
| 190 | 3300046558 | Ga0495633_0000157 | Ga0495633_0000157_85416_86729 | 437 |
| 191 | 3300046660 | Ga0495625_0000049 | Ga0495625_0000049_38388_39701 | 437 |
| 192 | 3300046660 | Ga0495625_0000548 | Ga0495625_0000548_5608_6921 | 437 |
| 193 | 3300046660 | Ga0495625_0003567 | Ga0495625_0003567_9606_10919 | 437 |
| 194 | 3300046665 | Ga0495661_0000134 | Ga0495661_0000134_26917_28230 | 437 |
| 195 | 3300046665 | Ga0495661_0006193 | Ga0495661_0006193_2669_3982 | 437 |
| 196 | 3300046694 | Ga0495649_0000014 | Ga0495649_0000014_156255_157568 | 437 |
| 197 | 3300047443 | Ga0495687_012896 | Ga0495687_012896_567_1880 | 437 |
| 198 | 3300047469 | Ga0495673_0038692 | Ga0495673_0038692_473_1786 | 437 |
| 199 | 3300047472 | Ga0495686_0000419 | Ga0495686_0000419_20117_21430 | 437 |
| 200 | 3300047472 | Ga0495686_0019622 | Ga0495686_0019622_1003_2316 | 437 |
| 201 | 3300048089 | Ga0495614_0048053 | Ga0495614_0048053_100_1413 | 437 |
| 202 | 3300050493 | nmdc:mga0k408_19441_c1 | nmdc:mga0k408_19441_c1_1711_3024 | 437 |
| 203 | 3300050493 | nmdc:mga0k408_5863_c1 | nmdc:mga0k408_5863_c1_5067_6380 | 437 |
| 204 | 3300053122 | Ga0500608_040479 | Ga0500608_040479_342_1655 | 437 |
| 205 | 3300053125 | Ga0500618_000005 | Ga0500618_000005_206728_208041 | 437 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1owo-assembly1.cif.gz_A | data4:photoreduced dna photolyase / received x-rays dose 1.2 exp15 photons/mm2 | 0.8828 | 5 | 436 |
| 2j07-assembly1.cif.gz_A | thermus dna photolyase with 8-hdf antenna chromophore | 0.8731 | 6 | 437 |
| 1owo-assembly1.cif.gz_A | data4:photoreduced dna photolyase / received x-rays dose 1.2 exp15 photons/mm2 | 0.8712 | 5 | 436 |
| 2j07-assembly1.cif.gz_A | thermus dna photolyase with 8-hdf antenna chromophore | 0.8692 | 6 | 437 |
| 3cvx-assembly1.cif.gz_A | drosophila melanogaster (6-4) photolyase h369m mutant bound to ds dna with a t-t (6-4) photolesion | 0.8605 | 4 | 435 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2e0iB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9324 | 7 | 133 | 3.40.50.620 |
| af_P05066_403_565_1.10.579.10 | Mainly Alpha;Orthogonal Bundle;DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3;DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 | 0.9314 | 280 | 434 | 1.10.579.10 |
| 1owmA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.928 | 5 | 133 | 3.40.50.620 |
| 4u63A03 | Mainly Alpha;Orthogonal Bundle;DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3;DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 | 0.9246 | 275 | 437 | 1.10.579.10 |
| af_A0A0R0HV48_301_502_1.10.579.10 | Mainly Alpha;Orthogonal Bundle;DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3;DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 | 0.923 | 275 | 435 | 1.10.579.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A520BBB0-F1-model_v4 | Deoxyribodipyrimidine photo-lyase | 0.9912 | 4 | 319 |
GO:0003677
GO:0003904 GO:0006139 GO:0006950 GO:0009416 GO:0071949 |
| AF-A0A4Q3CA72-F1-model_v4 | Deoxyribodipyrimidine photo-lyase | 0.9896 | 1 | 135 |
GO:0003677
GO:0003904 GO:0071949 |
| AF-A0A4Q3ELW9-F1-model_v4 | Deoxyribodipyrimidine photo-lyase | 0.9876 | 5 | 173 |
GO:0003677
GO:0003904 GO:0071949 |
| AF-A0A1W2C6J7-F1-model_v4 | FAD binding domain of DNA photolyase | 0.9854 | 4 | 261 |
GO:0003677
GO:0003904 GO:0009416 GO:0071949 |
| AF-A0A520BBB0-F1-model_v4 | Deoxyribodipyrimidine photo-lyase | 0.985 | 4 | 319 |
GO:0003677
GO:0003904 GO:0006139 GO:0006950 GO:0009416 GO:0071949 |
Predicted Structure (AlphaFold2)
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