F313744

General Info

Members Datasets Scaffolds Average Seq Length
205 118 205 316

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10009089|Ga0105240_1000908914
Length 325
Sequence MHVLHEGGDVSQDLNLLRVFDVLLEERSVTRTGARLGLTQSAVSHALNRLRYSLGDELFVRGPAGMQPTPRAVEMGPQVHAALNQLQAALAPSDFDPATSERRFAVVTGAYASAILAPPLASRLAEAAPQAELMIAELALDVLERMDARRVDFMVGSVLAAPERFARETILTEELVWVVRTNHPAFQGERIDLATLVSVPHVVIARSLPGLIEDGGERRAFVSRASWEDAGAFEAALAARGLTRRVGVSVPDTYTALSVASRTDMATLIPRRLALLSAQSGRVRLIDPPYESPSVDVSLLYLHERLAEPAIRWMHEAIRAVAASL

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
73 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
88 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
89 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
90 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
91 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
92 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
93 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
94 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
115 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
116 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
117 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.44
Nodule 0
Rhizoplane 2.93
Rhizosphere 91.71
Stem 0
Stem Tuber 0
Unclassified 2.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10162904 3300005327 Bacteria 1871
2 Ga0070658_10294631 3300005327 Bacteria 1383
3 Ga0070683_100113528 3300005329 Bacteria 2557
4 Ga0070666_10063088 3300005335 Bacteria 2511
5 Ga0070680_100001881 3300005336 Bacteria 15400
6 Ga0070680_100010557 3300005336 Bacteria 7125
7 Ga0070660_100021305 3300005339 Bacteria 4777
8 Ga0070691_10026178 3300005341 Bacteria 2718
9 Ga0070668_100002811 3300005347 Bacteria 12814
10 Ga0070668_100003743 3300005347 Bacteria 11222
11 Ga0070668_100091624 3300005347 Bacteria 2397
12 Ga0070669_100009688 3300005353 Bacteria 6862
13 Ga0070669_100066193 3300005353 Bacteria 2663
14 Ga0070669_100130977 3300005353 Bacteria 1924
15 Ga0070671_100004719 3300005355 Bacteria 10824
16 Ga0070671_100030269 3300005355 Bacteria 4467
17 Ga0070671_100109278 3300005355 Bacteria 2322
18 Ga0070671_100116050 3300005355 Bacteria 2251
19 Ga0070659_100000056 3300005366 Bacteria 88478
20 Ga0070659_100000991 3300005366 Bacteria 20852
21 Ga0070667_100001005 3300005367 Bacteria 25837
22 Ga0070667_100004220 3300005367 Bacteria 12130
23 Ga0070681_10030266 3300005458 Bacteria 5431
24 Ga0070681_10062260 3300005458 Bacteria 3705
25 Ga0070681_10160444 3300005458 Bacteria 2172
26 Ga0070679_100008671 3300005530 Bacteria 9582
27 Ga0070679_100045505 3300005530 Bacteria 4373
28 Ga0070679_100599521 3300005530 Bacteria 1045
29 Ga0068853_100029856 3300005539 Bacteria 4599
30 Ga0068853_100407576 3300005539 Unclassified 1273
31 Ga0070665_100000015 3300005548 Bacteria 462744
32 Ga0068855_100011635 3300005563 Bacteria 10633
33 Ga0068855_100046327 3300005563 Bacteria 5141
34 Ga0068855_100065188 3300005563 Bacteria 4247
35 Ga0068855_100194866 3300005563 Bacteria 2283
36 Ga0068857_100057122 3300005577 Bacteria 3464
37 Ga0068854_100128836 3300005578 Bacteria 1930
38 Ga0068859_100003642 3300005617 Bacteria 15701
39 Ga0068859_100056148 3300005617 Bacteria 3962
40 Ga0068864_100045219 3300005618 Bacteria 3777
41 Ga0068864_100119824 3300005618 Bacteria 2352
42 Ga0068864_100138450 3300005618 Bacteria 2193
43 Ga0068861_100155441 3300005719 Bacteria 1881
44 Ga0068863_100003399 3300005841 Bacteria 15703
45 Ga0068863_100281203 3300005841 Bacteria 1612
46 Ga0068863_100512237 3300005841 Unclassified 1182
47 Ga0068858_100004589 3300005842 Bacteria 13524
48 Ga0068860_100003672 3300005843 Bacteria 15792
49 Ga0068860_100018582 3300005843 Bacteria 6761
50 Ga0068860_100022320 3300005843 Bacteria 6124
51 Ga0068862_100002231 3300005844 Bacteria 17370
52 Ga0068862_100064514 3300005844 Bacteria 3153
53 Ga0068862_100198001 3300005844 Bacteria 1810
54 Ga0070717_10164334 3300006028 Bacteria 1927
55 Ga0068865_100000543 3300006881 Bacteria 20949
56 Ga0097620_100003642 3300006931 Bacteria 15701
57 Ga0097620_100056148 3300006931 Bacteria 3962
58 Ga0105240_10001280 3300009093 Bacteria 43524
59 Ga0105240_10009089 3300009093 Bacteria 14108
60 Ga0105240_10011508 3300009093 Bacteria 12314
61 Ga0105240_10026975 3300009093 Bacteria 7529
62 Ga0105240_10349026 3300009093 Bacteria 1679
63 Ga0105240_10365434 3300009093 Unclassified 1633
64 Ga0105242_10547948 3300009176 Bacteria 1108
65 Ga0105248_10001438 3300009177 Bacteria 26535
66 Ga0105248_10002553 3300009177 Bacteria 20265
67 Ga0105238_10016782 3300009551 Bacteria 7423
68 Ga0105238_10044109 3300009551 Bacteria 4510
69 Ga0105238_10058711 3300009551 Bacteria 3856
70 Ga0105238_10152727 3300009551 Bacteria 2284
71 Ga0105249_10111584 3300009553 Bacteria 2586
72 Ga0157369_10304524 3300013105 Bacteria 1657
73 Ga0163162_10024590 3300013306 Bacteria 5947
74 Ga0163163_10006945 3300014325 Bacteria 9946
75 Ga0163163_10010297 3300014325 Bacteria 8403
76 Ga0157379_10001045 3300014968 Bacteria 22478
77 Ga0213876_10002323 3300021384 Bacteria 11221
78 Ga0207680_10046584 3300025903 Bacteria 2564
79 Ga0207705_10081317 3300025909 Bacteria 2361
80 Ga0207705_10110236 3300025909 Bacteria 2033
81 Ga0207705_10294380 3300025909 Bacteria 1244
82 Ga0207707_10026892 3300025912 Bacteria 5028
83 Ga0207707_10050793 3300025912 Bacteria 3611
84 Ga0207707_10085848 3300025912 Bacteria 2750
85 Ga0207695_10000397 3300025913 Bacteria 98044
86 Ga0207695_10002860 3300025913 Bacteria 25097
87 Ga0207695_10005538 3300025913 Bacteria 16703
88 Ga0207695_10005948 3300025913 Bacteria 15963
89 Ga0207695_10020247 3300025913 Bacteria 7626
90 Ga0207660_10002417 3300025917 Bacteria 12264
91 Ga0207660_10100811 3300025917 Bacteria 2156
92 Ga0207657_10000906 3300025919 Bacteria 31293
93 Ga0207657_10032855 3300025919 Bacteria 4683
94 Ga0207652_10001016 3300025921 Bacteria 25826
95 Ga0207652_10134434 3300025921 Bacteria 2208
96 Ga0207681_10119287 3300025923 Bacteria 1932
97 Ga0207681_10192993 3300025923 Bacteria 1559
98 Ga0207694_10028554 3300025924 Bacteria 4253
99 Ga0207694_10033412 3300025924 Bacteria 3941
100 Ga0207694_10153945 3300025924 Bacteria 1853
101 Ga0207644_10002091 3300025931 Bacteria 12930
102 Ga0207644_10018867 3300025931 Bacteria 4674
103 Ga0207644_10083819 3300025931 Bacteria 2362
104 Ga0207644_10110675 3300025931 Bacteria 2076
105 Ga0207644_10279988 3300025931 Bacteria 1339
106 Ga0207690_10000568 3300025932 Bacteria 24144
107 Ga0207690_10010796 3300025932 Bacteria 5442
108 Ga0207706_10099186 3300025933 Bacteria 2563
109 Ga0207704_10001969 3300025938 Bacteria 9208
110 Ga0207711_10014954 3300025941 Bacteria 6446
111 Ga0207711_10016567 3300025941 Bacteria 6121
112 Ga0207667_10010407 3300025949 Bacteria 10874
113 Ga0207667_10099054 3300025949 Bacteria 3007
114 Ga0207667_10197606 3300025949 Bacteria 2063
115 Ga0207668_10001343 3300025972 Bacteria 14574
116 Ga0207668_10010261 3300025972 Bacteria 5655
117 Ga0207658_10019221 3300025986 Bacteria 4724
118 Ga0207703_10007974 3300026035 Bacteria 8370
119 Ga0207678_10145010 3300026067 Bacteria 2027
120 Ga0207702_10141709 3300026078 Bacteria 2176
121 Ga0207641_10013165 3300026088 Bacteria 6781
122 Ga0207641_10118430 3300026088 Bacteria 2359
123 Ga0207641_10229491 3300026088 Bacteria 1725
124 Ga0207641_10540967 3300026088 Unclassified 1135
125 Ga0207676_10029895 3300026095 Bacteria 4083
126 Ga0207676_10034903 3300026095 Bacteria 3811
127 Ga0207676_10503526 3300026095 Bacteria 1150
128 Ga0207674_10045768 3300026116 Bacteria 4498
129 Ga0207675_100077484 3300026118 Bacteria 3114
130 Ga0209999_1007918 3300027543 Unclassified 1911
131 Ga0268266_10000005 3300028379 Bacteria 1448194
132 Ga0268266_10321941 3300028379 Bacteria 1447
133 Ga0268265_10001340 3300028380 Bacteria 21014
134 Ga0268265_10038927 3300028380 Bacteria 3501
135 Ga0268265_10271395 3300028380 Unclassified 1513
136 Ga0268264_10001080 3300028381 Bacteria 26978
137 Ga0268264_10008779 3300028381 Bacteria 8386
138 Ga0268264_10035375 3300028381 Bacteria 4112
139 Ga0265334_10023542 3300028573 Bacteria 2504
140 Ga0307517_10001422 3300028786 Bacteria 40266
141 Ga0265327_10000359 3300031251 Bacteria 86745
142 Ga0265327_10090339 3300031251 Bacteria 1495
143 Ga0307513_10007378 3300031456 Bacteria 14270
144 Ga0307510_10027619 3300033180 Bacteria 6496
145 Ga0373944_0023386 3300035089 Bacteria 1802
146 Ga0373936_0087121 3300035113 Bacteria 1305
147 Ga0373935_0211658 3300035692 Bacteria 1344
148 Ga0373927_0000100 3300035695 Bacteria 64984
149 Ga0373925_0000636 3300037068 Bacteria 33115
150 Ga0395899_0000197 3300037312 Bacteria 88596
151 Ga0395900_0000006 3300037418 Bacteria 495364
152 Ga0395900_0231398 3300037418 Bacteria 1858
153 Ga0395900_0289811 3300037418 Bacteria 1626
154 Ga0395898_0029308 3300037466 Bacteria 5515
155 Ga0395905_0024794 3300037471 Bacteria 5660
156 Ga0395905_0032588 3300037471 Bacteria 4900
157 Ga0395905_0069794 3300037471 Bacteria 3291
158 Ga0436364_0530610 3300037853 Bacteria 1226
159 Ga0395901_0000001 3300038443 Bacteria 800383
160 Ga0395901_0135227 3300038443 Bacteria 2591
161 Ga0436365_1315716 3300039437 Bacteria 37907
162 Ga0466960_0147858 3300044901 Unclassified 1253
163 Ga0495606_0068109 3300046507 Bacteria 2253
164 Ga0495628_0122265 3300046516 Bacteria 1996
165 Ga0495642_0034055 3300046528 Bacteria 2050
166 Ga0495642_0113763 3300046528 Unclassified 1158
167 Ga0495621_0078239 3300046539 Bacteria 1229
168 Ga0495668_0186909 3300046616 Bacteria 1135
169 Ga0495611_0007650 3300046648 Bacteria 4587
170 Ga0495625_0033182 3300046660 Bacteria 3820
171 Ga0495625_0155313 3300046660 Unclassified 1536
172 Ga0495669_0001973 3300046684 Bacteria 8423
173 Ga0495593_0018022 3300047673 Bacteria 3972
174 Ga0496101_0295446 3300048904 Bacteria 1268
175 Ga0496112_0076691 3300048915 Bacteria 3306
176 Ga0496112_0227115 3300048915 Bacteria 1822
177 Ga0496113_0242666 3300048916 Bacteria 1438
178 Ga0496115_0000414 3300048918 Bacteria 34790
179 Ga0496115_0014589 3300048918 Bacteria 5949
180 Ga0501032_0075857 3300049569 Bacteria 2239
181 Ga0501033_0063399 3300049570 Unclassified 2720
182 Ga0501034_0019820 3300049571 Bacteria 6874
183 Ga0501034_0418743 3300049571 Bacteria 1261
184 Ga0501036_0092673 3300049572 Bacteria 2553
185 Ga0501038_0024064 3300049574 Bacteria 5435
186 Ga0501043_0004483 3300049579 Bacteria 11341
187 Ga0501046_0008847 3300049580 Bacteria 8746
188 Ga0501047_0002886 3300049581 Bacteria 16302
189 Ga0501047_0004119 3300049581 Bacteria 13682
190 Ga0501047_0040655 3300049581 Bacteria 4496
191 Ga0501047_0194792 3300049581 Bacteria 1889
192 Ga0501048_0107526 3300049582 Bacteria 1969
193 Ga0501067_0013464 3300049583 Bacteria 4532
194 Ga0501068_0122324 3300049584 Bacteria 1623
195 Ga0501073_0004843 3300049589 Bacteria 10104
196 Ga0501080_0009676 3300049742 Bacteria 8801
197 Ga0501083_0006922 3300049744 Bacteria 8051
198 Ga0501035_0009705 3300049822 Bacteria 8954
199 Ga0501044_0011964 3300049823 Bacteria 9404
200 Ga0500635_0000492 3300053080 Bacteria 10979
201 Ga0500641_0011061 3300053096 Bacteria 3271
202 Ga0500595_010208 3300053119 Bacteria 3742
203 Ga0500595_024276 3300053119 Bacteria 2118
204 Ga0500638_076930 3300053162 Bacteria 1589
205 Ga0501082_0016759 3300060353 Bacteria 6310

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0019820 Ga0501034_0019820_12_806 262
2 3300044901 Ga0466960_0147858 Ga0466960_0147858_19_840 273
3 3300009093 Ga0105240_10365434 Ga0105240_103654342 286
4 3300037853 Ga0436364_0530610 Ga0436364_0530610_12_872 286
5 3300009551 Ga0105238_10016782 Ga0105238_100167825 290
6 3300025924 Ga0207694_10153945 Ga0207694_101539452 290
7 3300037312 Ga0395899_0000197 Ga0395899_0000197_72053_73012 302
8 3300037418 Ga0395900_0000006 Ga0395900_0000006_129677_130636 302
9 3300038443 Ga0395901_0000001 Ga0395901_0000001_172926_173885 302
10 3300046648 Ga0495611_0007650 Ga0495611_0007650_1218_2129 303
11 3300005335 Ga0070666_10063088 Ga0070666_100630882 310
12 3300005347 Ga0070668_100003743 Ga0070668_1000037433 310
13 3300005347 Ga0070668_100091624 Ga0070668_1000916242 310
14 3300005353 Ga0070669_100130977 Ga0070669_1001309771 310
15 3300005355 Ga0070671_100109278 Ga0070671_1001092782 310
16 3300005367 Ga0070667_100004220 Ga0070667_1000042205 310
17 3300005539 Ga0068853_100407576 Ga0068853_1004075761 310
18 3300005617 Ga0068859_100056148 Ga0068859_1000561483 310
19 3300005719 Ga0068861_100155441 Ga0068861_1001554411 310
20 3300005843 Ga0068860_100003672 Ga0068860_10000367210 310
21 3300005843 Ga0068860_100018582 Ga0068860_1000185824 310
22 3300005844 Ga0068862_100002231 Ga0068862_10000223117 310
23 3300005844 Ga0068862_100198001 Ga0068862_1001980012 310
24 3300006931 Ga0097620_100056148 Ga0097620_1000561482 310
25 3300009093 Ga0105240_10001280 Ga0105240_1000128031 310
26 3300021384 Ga0213876_10002323 Ga0213876_100023235 310
27 3300025903 Ga0207680_10046584 Ga0207680_100465843 310
28 3300025913 Ga0207695_10005948 Ga0207695_100059487 310
29 3300025923 Ga0207681_10119287 Ga0207681_101192871 310
30 3300025931 Ga0207644_10083819 Ga0207644_100838192 310
31 3300025972 Ga0207668_10001343 Ga0207668_1000134310 310
32 3300026118 Ga0207675_100077484 Ga0207675_1000774842 310
33 3300028380 Ga0268265_10001340 Ga0268265_100013402 310
34 3300028380 Ga0268265_10271395 Ga0268265_102713952 310
35 3300028381 Ga0268264_10001080 Ga0268264_100010805 310
36 3300028381 Ga0268264_10035375 Ga0268264_100353752 310
37 3300028573 Ga0265334_10023542 Ga0265334_100235422 310
38 3300035692 Ga0373935_0211658 Ga0373935_0211658_186_1139 310
39 3300039437 Ga0436365_1315716 Ga0436365_1315716_33639_34580 310
40 3300049569 Ga0501032_0075857 Ga0501032_0075857_1164_2120 310
41 3300049572 Ga0501036_0092673 Ga0501036_0092673_437_1393 310
42 3300049574 Ga0501038_0024064 Ga0501038_0024064_3361_4317 310
43 3300049579 Ga0501043_0004483 Ga0501043_0004483_6775_7731 310
44 3300049580 Ga0501046_0008847 Ga0501046_0008847_1536_2492 310
45 3300049581 Ga0501047_0004119 Ga0501047_0004119_6544_7500 310
46 3300049581 Ga0501047_0040655 Ga0501047_0040655_205_1161 310
47 3300049583 Ga0501067_0013464 Ga0501067_0013464_193_1149 310
48 3300049584 Ga0501068_0122324 Ga0501068_0122324_140_1096 310
49 3300049589 Ga0501073_0004843 Ga0501073_0004843_4673_5629 310
50 3300049742 Ga0501080_0009676 Ga0501080_0009676_6744_7700 310
51 3300049744 Ga0501083_0006922 Ga0501083_0006922_1277_2233 310
52 3300049822 Ga0501035_0009705 Ga0501035_0009705_3007_3963 310
53 3300060353 Ga0501082_0016759 Ga0501082_0016759_4123_5079 310
54 3300005563 Ga0068855_100065188 Ga0068855_1000651882 311
55 3300046539 Ga0495621_0078239 Ga0495621_0078239_131_1066 311
56 3300049571 Ga0501034_0418743 Ga0501034_0418743_307_1242 311
57 3300053119 Ga0500595_010208 Ga0500595_010208_629_1588 311
58 3300031251 Ga0265327_10000359 Ga0265327_1000035972 312
59 3300046684 Ga0495669_0001973 Ga0495669_0001973_2297_3262 312
60 3300053119 Ga0500595_024276 Ga0500595_024276_682_1638 312
61 3300005336 Ga0070680_100010557 Ga0070680_1000105575 313
62 3300005458 Ga0070681_10160444 Ga0070681_101604441 313
63 3300005563 Ga0068855_100046327 Ga0068855_1000463274 313
64 3300005841 Ga0068863_100512237 Ga0068863_1005122371 313
65 3300009093 Ga0105240_10011508 Ga0105240_100115089 313
66 3300009176 Ga0105242_10547948 Ga0105242_105479481 313
67 3300013105 Ga0157369_10304524 Ga0157369_103045242 313
68 3300025912 Ga0207707_10085848 Ga0207707_100858482 313
69 3300025913 Ga0207695_10005538 Ga0207695_100055386 313
70 3300025949 Ga0207667_10099054 Ga0207667_100990543 313
71 3300026088 Ga0207641_10540967 Ga0207641_105409671 313
72 3300037471 Ga0395905_0024794 Ga0395905_0024794_3055_3999 313
73 3300037471 Ga0395905_0032588 Ga0395905_0032588_3099_4043 313
74 3300053096 Ga0500641_0011061 Ga0500641_0011061_561_1511 313
75 3300005327 Ga0070658_10294631 Ga0070658_102946312 314
76 3300005329 Ga0070683_100113528 Ga0070683_1001135281 314
77 3300005618 Ga0068864_100045219 Ga0068864_1000452193 314
78 3300026095 Ga0207676_10034903 Ga0207676_100349035 314
79 3300037418 Ga0395900_0289811 Ga0395900_0289811_283_1230 314
80 3300046507 Ga0495606_0068109 Ga0495606_0068109_767_1711 314
81 3300047673 Ga0495593_0018022 Ga0495593_0018022_267_1211 314
82 3300049570 Ga0501033_0063399 Ga0501033_0063399_640_1587 314
83 3300049823 Ga0501044_0011964 Ga0501044_0011964_8241_9188 314
84 3300053080 Ga0500635_0000492 Ga0500635_0000492_2494_3438 314
85 3300053162 Ga0500638_076930 Ga0500638_076930_487_1431 314
86 3300005353 Ga0070669_100066193 Ga0070669_1000661932 315
87 3300006881 Ga0068865_100000543 Ga0068865_1000005437 315
88 3300025938 Ga0207704_10001969 Ga0207704_100019694 315
89 3300046516 Ga0495628_0122265 Ga0495628_0122265_166_1113 315
90 3300005327 Ga0070658_10162904 Ga0070658_101629042 316
91 3300005336 Ga0070680_100001881 Ga0070680_1000018815 316
92 3300005339 Ga0070660_100021305 Ga0070660_1000213053 316
93 3300005341 Ga0070691_10026178 Ga0070691_100261782 316
94 3300005347 Ga0070668_100002811 Ga0070668_1000028113 316
95 3300005353 Ga0070669_100009688 Ga0070669_1000096882 316
96 3300005355 Ga0070671_100004719 Ga0070671_10000471913 316
97 3300005355 Ga0070671_100030269 Ga0070671_1000302695 316
98 3300005355 Ga0070671_100116050 Ga0070671_1001160501 316
99 3300005366 Ga0070659_100000056 Ga0070659_10000005682 316
100 3300005366 Ga0070659_100000991 Ga0070659_1000009916 316
101 3300005367 Ga0070667_100001005 Ga0070667_10000100517 316
102 3300005458 Ga0070681_10030266 Ga0070681_100302664 316
103 3300005458 Ga0070681_10062260 Ga0070681_100622603 316
104 3300005530 Ga0070679_100008671 Ga0070679_1000086716 316
105 3300005530 Ga0070679_100045505 Ga0070679_1000455054 316
106 3300005530 Ga0070679_100599521 Ga0070679_1005995211 316
107 3300005539 Ga0068853_100029856 Ga0068853_1000298563 316
108 3300005548 Ga0070665_100000015 Ga0070665_100000015234 316
109 3300005563 Ga0068855_100011635 Ga0068855_1000116354 316
110 3300005563 Ga0068855_100194866 Ga0068855_1001948662 316
111 3300005577 Ga0068857_100057122 Ga0068857_1000571225 316
112 3300005578 Ga0068854_100128836 Ga0068854_1001288362 316
113 3300005617 Ga0068859_100003642 Ga0068859_1000036425 316
114 3300005618 Ga0068864_100119824 Ga0068864_1001198241 316
115 3300005618 Ga0068864_100138450 Ga0068864_1001384501 316
116 3300005841 Ga0068863_100003399 Ga0068863_1000033995 316
117 3300005841 Ga0068863_100281203 Ga0068863_1002812032 316
118 3300005842 Ga0068858_100004589 Ga0068858_1000045896 316
119 3300005843 Ga0068860_100022320 Ga0068860_1000223204 316
120 3300005844 Ga0068862_100064514 Ga0068862_1000645142 316
121 3300006028 Ga0070717_10164334 Ga0070717_101643342 316
122 3300006931 Ga0097620_100003642 Ga0097620_1000036428 316
123 3300009093 Ga0105240_10009089 Ga0105240_1000908914 316
124 3300009093 Ga0105240_10026975 Ga0105240_100269755 316
125 3300009093 Ga0105240_10349026 Ga0105240_103490262 316
126 3300009177 Ga0105248_10001438 Ga0105248_1000143826 316
127 3300009177 Ga0105248_10002553 Ga0105248_100025539 316
128 3300009551 Ga0105238_10044109 Ga0105238_100441094 316
129 3300009551 Ga0105238_10058711 Ga0105238_100587113 316
130 3300009551 Ga0105238_10152727 Ga0105238_101527273 316
131 3300009553 Ga0105249_10111584 Ga0105249_101115843 316
132 3300013306 Ga0163162_10024590 Ga0163162_100245904 316
133 3300014325 Ga0163163_10006945 Ga0163163_100069453 316
134 3300014325 Ga0163163_10010297 Ga0163163_100102976 316
135 3300014968 Ga0157379_10001045 Ga0157379_1000104522 316
136 3300025909 Ga0207705_10081317 Ga0207705_100813172 316
137 3300025909 Ga0207705_10110236 Ga0207705_101102362 316
138 3300025909 Ga0207705_10294380 Ga0207705_102943801 316
139 3300025912 Ga0207707_10026892 Ga0207707_100268922 316
140 3300025912 Ga0207707_10050793 Ga0207707_100507932 316
141 3300025913 Ga0207695_10000397 Ga0207695_100003972 316
142 3300025913 Ga0207695_10002860 Ga0207695_100028602 316
143 3300025913 Ga0207695_10020247 Ga0207695_100202472 316
144 3300025917 Ga0207660_10002417 Ga0207660_100024176 316
145 3300025917 Ga0207660_10100811 Ga0207660_101008113 316
146 3300025919 Ga0207657_10000906 Ga0207657_100009066 316
147 3300025919 Ga0207657_10032855 Ga0207657_100328555 316
148 3300025921 Ga0207652_10001016 Ga0207652_100010166 316
149 3300025921 Ga0207652_10134434 Ga0207652_101344342 316
150 3300025923 Ga0207681_10192993 Ga0207681_101929932 316
151 3300025924 Ga0207694_10028554 Ga0207694_100285543 316
152 3300025924 Ga0207694_10033412 Ga0207694_100334123 316
153 3300025931 Ga0207644_10002091 Ga0207644_100020912 316
154 3300025931 Ga0207644_10018867 Ga0207644_100188674 316
155 3300025931 Ga0207644_10110675 Ga0207644_101106751 316
156 3300025931 Ga0207644_10279988 Ga0207644_102799882 316
157 3300025932 Ga0207690_10000568 Ga0207690_1000056820 316
158 3300025932 Ga0207690_10010796 Ga0207690_100107963 316
159 3300025933 Ga0207706_10099186 Ga0207706_100991863 316
160 3300025941 Ga0207711_10014954 Ga0207711_100149543 316
161 3300025941 Ga0207711_10016567 Ga0207711_100165674 316
162 3300025949 Ga0207667_10010407 Ga0207667_1001040711 316
163 3300025949 Ga0207667_10197606 Ga0207667_101976063 316
164 3300025972 Ga0207668_10010261 Ga0207668_100102613 316
165 3300025986 Ga0207658_10019221 Ga0207658_100192211 316
166 3300026035 Ga0207703_10007974 Ga0207703_100079743 316
167 3300026067 Ga0207678_10145010 Ga0207678_101450102 316
168 3300026078 Ga0207702_10141709 Ga0207702_101417092 316
169 3300026088 Ga0207641_10013165 Ga0207641_100131653 316
170 3300026088 Ga0207641_10118430 Ga0207641_101184302 316
171 3300026088 Ga0207641_10229491 Ga0207641_102294912 316
172 3300026095 Ga0207676_10029895 Ga0207676_100298953 316
173 3300026095 Ga0207676_10503526 Ga0207676_105035261 316
174 3300026116 Ga0207674_10045768 Ga0207674_100457683 316
175 3300027543 Ga0209999_1007918 Ga0209999_10079182 316
176 3300028379 Ga0268266_10000005 Ga0268266_10000005884 316
177 3300028379 Ga0268266_10321941 Ga0268266_103219411 316
178 3300028380 Ga0268265_10038927 Ga0268265_100389272 316
179 3300028381 Ga0268264_10008779 Ga0268264_100087795 316
180 3300028786 Ga0307517_10001422 Ga0307517_1000142229 316
181 3300031251 Ga0265327_10090339 Ga0265327_100903392 316
182 3300031456 Ga0307513_10007378 Ga0307513_1000737811 316
183 3300033180 Ga0307510_10027619 Ga0307510_100276195 316
184 3300035089 Ga0373944_0023386 Ga0373944_0023386_173_1123 316
185 3300035113 Ga0373936_0087121 Ga0373936_0087121_285_1247 316
186 3300035695 Ga0373927_0000100 Ga0373927_0000100_18754_19704 316
187 3300037068 Ga0373925_0000636 Ga0373925_0000636_13017_13967 316
188 3300037418 Ga0395900_0231398 Ga0395900_0231398_420_1370 316
189 3300037466 Ga0395898_0029308 Ga0395898_0029308_1702_2652 316
190 3300037471 Ga0395905_0069794 Ga0395905_0069794_1616_2566 316
191 3300038443 Ga0395901_0135227 Ga0395901_0135227_783_1733 316
192 3300046528 Ga0495642_0034055 Ga0495642_0034055_347_1297 316
193 3300046528 Ga0495642_0113763 Ga0495642_0113763_184_1134 316
194 3300046616 Ga0495668_0186909 Ga0495668_0186909_120_1082 316
195 3300046660 Ga0495625_0033182 Ga0495625_0033182_2233_3201 316
196 3300046660 Ga0495625_0155313 Ga0495625_0155313_269_1237 316
197 3300048904 Ga0496101_0295446 Ga0496101_0295446_83_1036 316
198 3300048915 Ga0496112_0076691 Ga0496112_0076691_1901_2851 316
199 3300048915 Ga0496112_0227115 Ga0496112_0227115_695_1645 316
200 3300048916 Ga0496113_0242666 Ga0496113_0242666_177_1127 316
201 3300048918 Ga0496115_0000414 Ga0496115_0000414_3909_4871 316
202 3300048918 Ga0496115_0014589 Ga0496115_0014589_4216_5166 316
203 3300049581 Ga0501047_0002886 Ga0501047_0002886_7575_8528 316
204 3300049581 Ga0501047_0194792 Ga0501047_0194792_230_1183 316
205 3300049582 Ga0501048_0107526 Ga0501048_0107526_197_1150 316

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

14

73

0.97

PF03466

LysR_substrate

LysR substrate binding domain

98

228

0.89

PF03466

LysR_substrate

LysR substrate binding domain

212

323

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.949 3 81
4ihs-assembly3.cif.gz_C crystal structure of benm_dbd/catb site 1 dna complex 0.9465 3 81
4iht-assembly2.cif.gz_C crystal structure of benm_dbd/bena site 1 dna complex 0.9424 3 81
4iht-assembly1.cif.gz_A crystal structure of benm_dbd/bena site 1 dna complex 0.9391 3 81
4ihs-assembly1.cif.gz_B crystal structure of benm_dbd/catb site 1 dna complex 0.9352 3 81
ID Description Score Start End Superfamily
af_P10151_15_101_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9723 3 79 1.10.10.10
af_P31463_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9709 3 77 1.10.10.10
af_P30979_21_108_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9586 2 81 1.10.10.10
af_P37682_6_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9539 3 81 1.10.10.10
af_P52696_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.951 4 81 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3C1Y027-F1-model_v4 LysR family transcriptional regulator 0.9645 3 81 GO:0003700
GO:0005829
AF-A0A3S4IF02-F1-model_v4 Cat operon transcriptional regulator 0.9626 1 81 GO:0000976
GO:0003700
AF-A0A2S3YSY6-F1-model_v4 HTH lysR-type domain-containing protein 0.9555 3 76 GO:0003700
AF-A0A1Q5IPR2-F1-model_v4 Transcriptional regulator 0.9546 3 80 GO:0000976
GO:0003700
AF-A0A0F4JEL2-F1-model_v4 LysR family transcriptional regulator 0.9506 3 77 GO:0003677
GO:0003700
GO:0032993

Feature Viewer

pLDDT pTM Quality
87.57 0.69 Medium
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Predicted Structure (AlphaFold2)

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