F313302

General Info

Members Datasets Scaffolds Average Seq Length
205 170 175 743

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10085602|rootL2_100856022
Length 789
Sequence MRRRTLLLTGAGALGALIVGWGALPPRSRLGDAHTLAPADGEVGLNGWIKIAGDGTVLLAMNRSEMGQGVHTALSQLVAEELDVPLSSVRLTEAGHDAIYGNVAALLGGVPFGPRDQQRRAFKFASWITAKVGRELGLNLTGGSSSTADAWDTLRLAAATARAQLLGAAALKHKLPVDELSVKDGVIQHASGVLSHYGELAAQAALTPPSEVRLKDRRQWTQIGRALPRKDLAAKVDGSARFGLDVREQGQVFAAIRHCPMLGGGLGPANVDAVRARPGVLRVVALGPVAGSTAGYAVVARTTWHAREAAKALEVDWQPPPNGRLESKAIRASLEAEARRAHAAGDGFAFLNQGDTGGVLAGAATKLEAVYSAPHLAHVTMEPMNCTAQVLDGHVTVWAPTQVPGFARDVAARVAGVPPEQVTVHVTYLGGGFGRRLDVDFIAQAVRIALEMGGLPVQLVWSREEDMTHDFYRPAEVAVLQAGLDANGQPLALAITGASDAIVPRWAERVMPGLATTLDVLNRNGFPDGRAPAALTMRGDAPDKTASEGLFDLAYAIPNTRVAHQPTHSGVPVGMWRGVGHSHHAFFKEGFIDELAHAAKADPVAFRLQLLEGLPRHQAVLKRAAEMAGWGQPLPAGVARGVAVHESFGSIVAQVVEVTKQDGKPHVKRVVCAIDCGTVVNPGIVAQQMEGGVIFGLSAALWGRVDIEDGVVRQRNFGPDPAAGNVRLLRLAEMPKVETHIVPSHRAPSGVGEPGTPPVAPALANALFALTGTRTRELPLNIPGLSSVA

Samples

Sample ID Description Type Environment
1 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
2 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
3 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
4 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
5 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
6 2643221570 Acidovorax sp. Root568 Isolate Unclassified
7 2643221585 Pelomonas sp. Root662 Isolate Unclassified
8 2643221596 Acidovorax sp. Root70 Isolate Unclassified
9 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
10 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
11 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
12 2643221652 Acidovorax sp. Root402 Isolate Unclassified
13 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
14 2643221656 Pelomonas sp. Root405 Isolate Unclassified
15 2738541337 Pelomonas sp. BT06 Isolate Unclassified
16 2818991446 Variovorax sp. 1180 Isolate Unclassified
17 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
18 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
19 2885198086 Variovorax sp. 679 Isolate Unclassified
20 2885211737 Variovorax sp. 553 Isolate Unclassified
21 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
22 2899924645 Variovorax sp. 369 Isolate Unclassified
23 2928037797 Variovorax sp. 1126 Isolate Unclassified
24 2928044640 Variovorax sp. 1128 Isolate Unclassified
25 2928051484 Variovorax sp. 1133 Isolate Unclassified
26 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
27 2928070936 Variovorax gossypii 1167 Isolate Unclassified
28 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
29 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
30 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
31 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
32 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
33 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
34 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
35 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
36 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
37 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
38 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
39 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
40 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
41 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
42 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
43 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
44 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
45 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
46 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
47 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
48 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
49 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
50 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
51 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
52 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
53 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
54 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
55 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
56 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
57 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
65 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
66 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
67 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
68 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
69 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
78 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
79 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
85 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
86 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
87 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
90 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
92 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
95 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
97 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
99 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
101 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
116 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
117 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
120 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
123 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
124 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
135 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
142 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
143 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
168 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.37
Metatranscriptomes 0
Isolates 14.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.78
Nodule 0.49
Rhizoplane 2.44
Rhizosphere 47.32
Stem 0
Stem Tuber 0
Unclassified 20.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000793 3300002987 Bacteria 13743
2 JGI25151J46595_10004344 3300003187 Bacteria 7517
3 JGI25153J46596_10004489 3300003215 Bacteria 7517
4 rootH1_10037623 3300003316 Bacteria 5127
5 rootL2_10085602 3300003322 Bacteria 2621
6 JGI25160J50197_1002272 3300003354 Bacteria 9010
7 Ga0055535_1001667 3300003761 Bacteria 10210
8 Ga0055542_1000052 3300003762 Bacteria 173583
9 Ga0055526_1002176 3300003771 Bacteria 13440
10 Ga0055537_1000206 3300003773 Bacteria 44166
11 Ga0055537_1001213 3300003773 Bacteria 10870
12 Ga0055524_1001478 3300003775 Bacteria 13410
13 Ga0055534_1000197 3300003784 Bacteria 44166
14 Ga0055534_1001158 3300003784 Bacteria 11134
15 Ga0055528_1000352 3300003790 Bacteria 37775
16 Ga0055528_1002140 3300003790 Bacteria 10870
17 Ga0055531_10000247 3300003794 Bacteria 58229
18 Ga0055531_10001847 3300003794 Bacteria 14935
19 Ga0055543_1000790 3300004625 Bacteria 15686
20 Ga0065165_1002452 3300005262 Bacteria 15678
21 Ga0068869_100004717 3300005334 Bacteria 8506
22 Ga0070682_100012952 3300005337 Bacteria 4788
23 Ga0068868_100013726 3300005338 Bacteria 5951
24 Ga0070689_100081278 3300005340 Bacteria 2544
25 Ga0070673_100012985 3300005364 Bacteria 5743
26 Ga0070681_10028539 3300005458 Bacteria 5611
27 Ga0070707_100002244 3300005468 Bacteria 18435
28 Ga0070698_100000025 3300005471 Bacteria 101563
29 Ga0070698_100033121 3300005471 Bacteria 5353
30 Ga0070696_100009606 3300005546 Bacteria 6469
31 Ga0070696_100062165 3300005546 Bacteria 2613
32 Ga0070704_100002893 3300005549 Bacteria 9742
33 Ga0075363_100004802 3300006048 Bacteria 5962
34 Ga0075366_10005773 3300006195 Bacteria 6723
35 Ga0075366_10010806 3300006195 Bacteria 5134
36 Ga0097621_100004186 3300006237 Bacteria 10010
37 Ga0075370_10004098 3300006353 Bacteria 7019
38 Ga0075370_10020861 3300006353 Bacteria 3586
39 Ga0068871_100002822 3300006358 Bacteria 11886
40 Ga0075428_100022901 3300006844 Bacteria 6914
41 Ga0075431_100029577 3300006847 Bacteria 5640
42 Ga0075433_10024206 3300006852 Bacteria 5121
43 Ga0075434_100025209 3300006871 Bacteria 5819
44 Ga0075429_100008469 3300006880 Bacteria 8954
45 Ga0099826_10001174 3300006948 Bacteria 15137
46 Ga0099794_10011322 3300007265 Bacteria 3815
47 Ga0099795_10002615 3300007788 Bacteria 4281
48 Ga0105240_10130163 3300009093 Bacteria 3019
49 Ga0111539_10003499 3300009094 Bacteria 20711
50 Ga0114129_10009042 3300009147 Bacteria 14197
51 Ga0114129_10015894 3300009147 Bacteria 10704
52 Ga0105243_10000443 3300009148 Bacteria 43196
53 Ga0105243_10033906 3300009148 Bacteria 3949
54 Ga0105242_10009238 3300009176 Bacteria 7564
55 Ga0105248_10004364 3300009177 Bacteria 15645
56 Ga0105249_10022002 3300009553 Bacteria 5710
57 Ga0099796_10001259 3300010159 Bacteria 4975
58 Ga0157319_1000004 3300012497 Bacteria 394735
59 Ga0157371_10034435 3300013102 Bacteria 3632
60 Ga0157370_10086821 3300013104 Bacteria 2939
61 Ga0157375_10029115 3300013308 Bacteria 5189
62 Ga0182008_10000413 3300014497 Bacteria 33054
63 Ga0157376_10040922 3300014969 Bacteria 3791
64 Ga0182006_1000002 3300015261 Bacteria 887990
65 Ga0182007_10000069 3300015262 Bacteria 82172
66 Ga0182005_1000002 3300015265 Bacteria 908499
67 Ga0209672_102894 3300025228 Bacteria 3848
68 Ga0209258_100009 3300025242 Bacteria 996276
69 Ga0207425_1000294 3300025245 Bacteria 36412
70 Ga0209148_1000007 3300025254 Bacteria 1592273
71 Ga0209129_1000083 3300025258 Bacteria 183270
72 Ga0209565_1000182 3300025263 Bacteria 77316
73 Ga0209565_1000194 3300025263 Bacteria 73024
74 Ga0209673_1000106 3300025273 Bacteria 185426
75 Ga0209673_1000412 3300025273 Bacteria 75374
76 Ga0209130_1001006 3300025284 Bacteria 21888
77 Ga0209675_1000058 3300025291 Bacteria 185426
78 Ga0209675_1000304 3300025291 Bacteria 44374
79 Ga0209675_1000586 3300025291 Bacteria 26257
80 Ga0209025_1000492 3300025294 Bacteria 75894
81 Ga0209564_1000244 3300025295 Bacteria 117606
82 Ga0209758_1000132 3300025297 Bacteria 183273
83 Ga0209256_1000192 3300025299 Bacteria 117606
84 Ga0207426_1000385 3300025302 Bacteria 75897
85 Ga0209051_1002423 3300025303 Bacteria 13406
86 Ga0209051_1006550 3300025303 Bacteria 6538
87 Ga0209257_1000016 3300025304 Bacteria 908015
88 Ga0209257_1001234 3300025304 Bacteria 31754
89 Ga0209257_1002378 3300025304 Bacteria 18857
90 Ga0207653_10007781 3300025885 Bacteria 3344
91 Ga0207695_10132929 3300025913 Bacteria 2444
92 Ga0207660_10013346 3300025917 Bacteria 5383
93 Ga0207659_10018555 3300025926 Bacteria 4563
94 Ga0207644_10045098 3300025931 Bacteria 3135
95 Ga0207686_10004950 3300025934 Bacteria 7169
96 Ga0207670_10018097 3300025936 Bacteria 4273
97 Ga0207691_10006376 3300025940 Bacteria 11396
98 Ga0207677_10036903 3300026023 Bacteria 3190
99 Ga0207678_10055446 3300026067 Bacteria 3414
100 Ga0207674_10009270 3300026116 Bacteria 11279
101 Ga0307515_10000006 3300028794 Bacteria 725810
102 Ga0307515_10000041 3300028794 Bacteria 319110
103 Ga0307515_10000043 3300028794 Bacteria 304612
104 Ga0307515_10012201 3300028794 Bacteria 16196
105 Ga0307515_10071448 3300028794 Bacteria 4703
106 Ga0307515_10077108 3300028794 Bacteria 4407
107 Ga0265327_10000056 3300031251 Bacteria 243974
108 Ga0307513_10004377 3300031456 Bacteria 18868
109 Ga0307509_10025831 3300031507 Bacteria 6558
110 Ga0307408_100000016 3300031548 Bacteria 356896
111 Ga0307408_100008204 3300031548 Bacteria 6898
112 Ga0307508_10033217 3300031616 Bacteria 4657
113 Ga0307516_10003242 3300031730 Bacteria 21112
114 Ga0307412_10019808 3300031911 Bacteria 4083
115 Ga0373955_0023678 3300035172 Bacteria 3131
116 Ga0373955_0046556 3300035172 Bacteria 2345
117 Ga0373961_0000034 3300035241 Bacteria 83736
118 Ga0316582_0014235 3300036647 Bacteria 4506
119 Ga0395899_0010746 3300037312 Bacteria 7019
120 Ga0395905_0000572 3300037471 Bacteria 49936
121 Ga0395905_0000951 3300037471 Bacteria 37161
122 Ga0395905_0020727 3300037471 Bacteria 6223
123 Ga0439449_0000768 3300042007 Bacteria 12331
124 Ga0450890_000940 3300042127 Bacteria 4218
125 Ga0451577_0040187 3300042876 Bacteria 4200
126 Ga0451576_0019052 3300045051 Bacteria 7499
127 Ga0495592_0012552 3300046454 Bacteria 6438
128 Ga0495608_0019477 3300046511 Bacteria 4669
129 Ga0495645_0000842 3300046543 Bacteria 20871
130 Ga0495622_0012899 3300046557 Bacteria 3876
131 Ga0495633_0003054 3300046558 Bacteria 11390
132 Ga0495667_0004691 3300046559 Bacteria 9241
133 Ga0495668_0002305 3300046616 Bacteria 16009
134 Ga0495657_0013668 3300046675 Bacteria 5980
135 Ga0495658_0008564 3300046683 Bacteria 5075
136 Ga0496106_0000425 3300048909 Bacteria 30060
137 Ga0496116_0024277 3300048919 Bacteria 4489
138 Ga0496117_0000001 3300048920 Bacteria 2526244
139 Ga0496118_0000002 3300048921 Bacteria 1690764
140 Ga0496118_0004162 3300048921 Bacteria 17457
141 Ga0496121_0002234 3300048924 Bacteria 30187
142 Ga0496121_0019187 3300048924 Bacteria 6851
143 Ga0496121_0023209 3300048924 Bacteria 5984
144 Ga0496122_0018776 3300048925 Bacteria 6360
145 Ga0496123_0014846 3300048926 Bacteria 6428
146 Ga0496124_0075170 3300048927 Bacteria 2791
147 Ga0496125_0045963 3300048928 Bacteria 3668
148 Ga0496126_0001830 3300048929 Bacteria 31034
149 Ga0501032_0041568 3300049569 Bacteria 3121
150 Ga0501034_0063137 3300049571 Bacteria 3718
151 Ga0501043_0000101 3300049579 Bacteria 78983
152 Ga0501046_0000135 3300049580 Bacteria 79084
153 Ga0501047_0000173 3300049581 Bacteria 79071
154 Ga0501048_0001244 3300049582 Bacteria 19301
155 Ga0501045_0008555 3300049824 Bacteria 7132
156 nmdc:mga03n38_1197_c1 3300050490 Bacteria 7258
157 nmdc:mga0k408_18981_c1 3300050493 Bacteria 3839
158 nmdc:mga0k408_5382_c1 3300050493 Bacteria 6807
159 nmdc:mga07m45_14111_c1 3300050496 Bacteria 4251
160 nmdc:mga07m45_23185_c1 3300050496 Bacteria 3392
161 nmdc:mga07m45_6225_c1 3300050496 Bacteria 6026
162 nmdc:mga05p37_19455_c1 3300050507 Bacteria 8213
163 nmdc:mga05p37_21661_c1 3300050507 Bacteria 7787
164 nmdc:mga09592_474_c1 3300050508 Bacteria 30004
165 nmdc:mga06r32_9386_c1 3300050510 Bacteria 8822
166 nmdc:mga08y16_50515_c1 3300050511 Bacteria 4352
167 nmdc:mga0n895_2554_c1 3300050512 Bacteria 14266
168 nmdc:mga08x19_14231_c1 3300050514 Bacteria 4822
169 Ga0495601_0036203 3300053077 Bacteria 3081
170 Ga0500555_000116 3300053103 Bacteria 37945
171 Ga0500556_0000117 3300053104 Bacteria 69237
172 Ga0500616_0000468 3300053153 Bacteria 52556
173 Ga0500616_0003215 3300053153 Bacteria 12669
174 Ga0500645_000103 3300053730 Bacteria 67414
175 Ga0500645_000685 3300053730 Bacteria 21170

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046543 Ga0495645_0000842 Ga0495645_0000842_29_1780 566
2 3300048928 Ga0496125_0045963 Ga0496125_0045963_20_1906 617
3 3300050493 nmdc:mga0k408_18981_c1 nmdc:mga0k408_18981_c1_1083_3221 659
4 3300003316 rootH1_10037623 rootH1_100376235 668
5 3300005546 Ga0070696_100009606 Ga0070696_1000096062 668
6 3300025885 Ga0207653_10007781 Ga0207653_100077812 671
7 3300005468 Ga0070707_100002244 Ga0070707_10000224414 675
8 3300005471 Ga0070698_100033121 Ga0070698_1000331213 675
9 3300005549 Ga0070704_100002893 Ga0070704_1000028936 675
10 3300006847 Ga0075431_100029577 Ga0075431_1000295772 675
11 3300050510 nmdc:mga06r32_9386_c1 nmdc:mga06r32_9386_c1_3915_6026 675
12 3300025291 Ga0209675_1000586 Ga0209675_100058618 677
13 3300005340 Ga0070689_100081278 Ga0070689_1000812781 680
14 3300025936 Ga0207670_10018097 Ga0207670_100180972 680
15 3300045051 Ga0451576_0019052 Ga0451576_0019052_1378_3555 680
16 3300035241 Ga0373961_0000034 Ga0373961_0000034_66447_68549 681
17 3300050514 nmdc:mga08x19_14231_c1 nmdc:mga08x19_14231_c1_470_2581 685
18 3300006852 Ga0075433_10024206 Ga0075433_100242063 688
19 3300006871 Ga0075434_100025209 Ga0075434_1000252092 688
20 3300009147 Ga0114129_10015894 Ga0114129_100158943 688
21 3300009553 Ga0105249_10022002 Ga0105249_100220024 688
22 3300050507 nmdc:mga05p37_21661_c1 nmdc:mga05p37_21661_c1_1858_3993 688
23 3300050512 nmdc:mga0n895_2554_c1 nmdc:mga0n895_2554_c1_4228_6363 688
24 3300036647 Ga0316582_0014235 Ga0316582_0014235_1768_3960 689
25 3300053730 Ga0500645_000103 Ga0500645_000103_25867_28164 689
26 3300035172 Ga0373955_0023678 Ga0373955_0023678_24_2165 690
27 3300046454 Ga0495592_0012552 Ga0495592_0012552_529_2670 690
28 3300046511 Ga0495608_0019477 Ga0495608_0019477_445_2586 690
29 3300046559 Ga0495667_0004691 Ga0495667_0004691_2381_4522 690
30 3300046675 Ga0495657_0013668 Ga0495657_0013668_2686_4827 690
31 3300053077 Ga0495601_0036203 Ga0495601_0036203_497_2638 690
32 3300053103 Ga0500555_000116 Ga0500555_000116_10559_12847 690
33 3300006237 Ga0097621_100004186 Ga0097621_1000041866 691
34 3300006358 Ga0068871_100002822 Ga0068871_1000028226 691
35 3300009176 Ga0105242_10009238 Ga0105242_100092386 691
36 3300014969 Ga0157376_10040922 Ga0157376_100409222 691
37 3300025934 Ga0207686_10004950 Ga0207686_100049506 691
38 3300028794 Ga0307515_10000041 Ga0307515_1000004187 691
39 3300006844 Ga0075428_100022901 Ga0075428_1000229014 692
40 3300009094 Ga0111539_10003499 Ga0111539_100034994 692
41 3300050511 nmdc:mga08y16_50515_c1 nmdc:mga08y16_50515_c1_1723_3870 692
42 3300042876 Ga0451577_0040187 Ga0451577_0040187_443_2605 693
43 3300006880 Ga0075429_100008469 Ga0075429_1000084693 694
44 3300009147 Ga0114129_10009042 Ga0114129_1000904212 694
45 3300031911 Ga0307412_10019808 Ga0307412_100198082 694
46 3300050507 nmdc:mga05p37_19455_c1 nmdc:mga05p37_19455_c1_1885_4065 694
47 3300050508 nmdc:mga09592_474_c1 nmdc:mga09592_474_c1_4504_6684 694
48 3300037471 Ga0395905_0020727 Ga0395905_0020727_484_2619 695
49 3300026067 Ga0207678_10055446 Ga0207678_100554462 696
50 3300053104 Ga0500556_0000117 Ga0500556_0000117_32847_35015 696
51 3300005471 Ga0070698_100000025 Ga0070698_10000002518 697
52 3300035172 Ga0373955_0046556 Ga0373955_0046556_36_2249 697
53 3300053153 Ga0500616_0003215 Ga0500616_0003215_13_2184 697
54 3300053153 Ga0500616_0000468 Ga0500616_0000468_1975_4266 699
55 3300005458 Ga0070681_10028539 Ga0070681_100285392 702
56 3300005546 Ga0070696_100062165 Ga0070696_1000621651 702
57 3300009093 Ga0105240_10130163 Ga0105240_101301632 702
58 3300013104 Ga0157370_10086821 Ga0157370_100868212 702
59 3300025913 Ga0207695_10132929 Ga0207695_101329292 702
60 3300025917 Ga0207660_10013346 Ga0207660_100133463 702
61 3300046616 Ga0495668_0002305 Ga0495668_0002305_10645_12828 704
62 3300048927 Ga0496124_0075170 Ga0496124_0075170_547_2715 722
63 3300009177 Ga0105248_10004364 Ga0105248_100043642 724
64 3300028794 Ga0307515_10000043 Ga0307515_10000043171 726
65 3300007265 Ga0099794_10011322 Ga0099794_100113224 727
66 3300010159 Ga0099796_10001259 Ga0099796_100012596 727
67 3300028794 Ga0307515_10077108 Ga0307515_100771084 728
68 3300007788 Ga0099795_10002615 Ga0099795_100026154 729
69 iso_pu_bacteria 2643221639 2644220350 731
70 iso_pu_bacteria 2643221646 2644259275 731
71 3300028794 Ga0307515_10000006 Ga0307515_10000006198 732
72 iso_pu_bacteria 2643221585 2643935022 732
73 iso_pu_bacteria 2643221654 2644303772 732
74 iso_pu_bacteria 2643221656 2644316509 732
75 iso_pu_bacteria 2738541337 2739053536 732
76 3300031251 Ga0265327_10000056 Ga0265327_1000005685 734
77 3300037471 Ga0395905_0000572 Ga0395905_0000572_37141_39411 734
78 iso_pu_bacteria 2886848708 2886853609 734
79 3300003794 Ga0055531_10000247 Ga0055531_1000024731 735
80 3300025303 Ga0209051_1006550 Ga0209051_10065503 735
81 3300025304 Ga0209257_1000016 Ga0209257_1000016449 735
82 3300028794 Ga0307515_10071448 Ga0307515_100714482 735
83 3300053730 Ga0500645_000685 Ga0500645_000685_11542_13818 735
84 iso_pu_bacteria 2643221603 2644026548 735
85 3300005334 Ga0068869_100004717 Ga0068869_1000047173 736
86 3300005337 Ga0070682_100012952 Ga0070682_1000129524 736
87 3300005338 Ga0068868_100013726 Ga0068868_1000137261 736
88 3300005364 Ga0070673_100012985 Ga0070673_1000129852 736
89 3300009148 Ga0105243_10033906 Ga0105243_100339061 736
90 3300013308 Ga0157375_10029115 Ga0157375_100291153 736
91 3300025926 Ga0207659_10018555 Ga0207659_100185552 736
92 3300025931 Ga0207644_10045098 Ga0207644_100450982 736
93 3300025940 Ga0207691_10006376 Ga0207691_100063763 736
94 3300026023 Ga0207677_10036903 Ga0207677_100369032 736
95 3300026116 Ga0207674_10009270 Ga0207674_100092707 736
96 3300037471 Ga0395905_0000951 Ga0395905_0000951_9237_11567 736
97 3300049569 Ga0501032_0041568 Ga0501032_0041568_446_2725 736
98 3300049579 Ga0501043_0000101 Ga0501043_0000101_76408_78687 736
99 3300049580 Ga0501046_0000135 Ga0501046_0000135_277_2556 736
100 3300049581 Ga0501047_0000173 Ga0501047_0000173_76515_78794 736
101 3300049582 Ga0501048_0001244 Ga0501048_0001244_286_2565 736
102 3300049824 Ga0501045_0008555 Ga0501045_0008555_4565_6844 736
103 3300003322 rootL2_10085602 rootL2_100856022 737
104 3300006353 Ga0075370_10004098 Ga0075370_100040984 737
105 3300028794 Ga0307515_10012201 Ga0307515_100122015 737
106 3300031507 Ga0307509_10025831 Ga0307509_100258314 737
107 3300031616 Ga0307508_10033217 Ga0307508_100332173 737
108 3300046683 Ga0495658_0008564 Ga0495658_0008564_2455_4749 737
109 3300050496 nmdc:mga07m45_6225_c1 nmdc:mga07m45_6225_c1_1628_3907 737
110 iso_pu_bacteria 2600255292 2601667663 737
111 iso_pu_bacteria 2857547612 2857550310 737
112 iso_pu_bacteria 2885080285 2885085403 737
113 iso_pu_bacteria 2932410948 2932411268 737
114 iso_pu_bacteria 2932416698 2932419165 737
115 3300012497 Ga0157319_1000004 Ga0157319_100000495 739
116 3300014497 Ga0182008_10000413 Ga0182008_1000041330 739
117 3300015261 Ga0182006_1000002 Ga0182006_1000002567 739
118 3300015262 Ga0182007_10000069 Ga0182007_1000006922 739
119 3300015265 Ga0182005_1000002 Ga0182005_1000002526 739
120 3300042127 Ga0450890_000940 Ga0450890_000940_734_2995 739
121 3300046557 Ga0495622_0012899 Ga0495622_0012899_122_2395 739
122 3300046558 Ga0495633_0003054 Ga0495633_0003054_568_2841 739
123 3300048919 Ga0496116_0024277 Ga0496116_0024277_326_2599 739
124 3300048920 Ga0496117_0000001 Ga0496117_0000001_1457303_1459576 739
125 3300048921 Ga0496118_0000002 Ga0496118_0000002_1457303_1459576 739
126 3300048924 Ga0496121_0019187 Ga0496121_0019187_3768_6041 739
127 3300048924 Ga0496121_0023209 Ga0496121_0023209_3438_5711 739
128 3300048925 Ga0496122_0018776 Ga0496122_0018776_122_2395 739
129 3300048926 Ga0496123_0014846 Ga0496123_0014846_3949_6222 739
130 3300050496 nmdc:mga07m45_23185_c1 nmdc:mga07m45_23185_c1_936_3197 739
131 3300031548 Ga0307408_100000016 Ga0307408_100000016266 740
132 3300037312 Ga0395899_0010746 Ga0395899_0010746_3865_6177 740
133 3300049571 Ga0501034_0063137 Ga0501034_0063137_947_3259 740
134 iso_pu_bacteria 2643221570 2643867875 741
135 iso_pu_bacteria 2643221596 2643991746 741
136 iso_pu_bacteria 2643221652 2644293486 741
137 iso_pu_bacteria 2990710928 2990713753 741
138 3300003773 Ga0055537_1000206 Ga0055537_100020632 745
139 3300003784 Ga0055534_1000197 Ga0055534_100019732 745
140 3300003790 Ga0055528_1000352 Ga0055528_100035210 745
141 3300003794 Ga0055531_10001847 Ga0055531_1000184710 745
142 3300006195 Ga0075366_10010806 Ga0075366_100108064 745
143 3300006353 Ga0075370_10020861 Ga0075370_100208612 745
144 3300006948 Ga0099826_10001174 Ga0099826_100011748 745
145 3300025263 Ga0209565_1000182 Ga0209565_100018261 745
146 3300025273 Ga0209673_1000106 Ga0209673_100010613 745
147 3300025291 Ga0209675_1000058 Ga0209675_100005813 745
148 3300025304 Ga0209257_1001234 Ga0209257_100123416 745
149 3300031456 Ga0307513_10004377 Ga0307513_100043772 745
150 3300031548 Ga0307408_100008204 Ga0307408_1000082046 745
151 3300031730 Ga0307516_10003242 Ga0307516_100032423 745
152 3300042007 Ga0439449_0000768 Ga0439449_0000768_1984_4263 745
153 3300050490 nmdc:mga03n38_1197_c1 nmdc:mga03n38_1197_c1_3774_6047 746
154 3300050493 nmdc:mga0k408_5382_c1 nmdc:mga0k408_5382_c1_904_3177 746
155 3300050496 nmdc:mga07m45_14111_c1 nmdc:mga07m45_14111_c1_1354_3627 746
156 3300006048 Ga0075363_100004802 Ga0075363_1000048024 748
157 3300006195 Ga0075366_10005773 Ga0075366_100057733 748
158 iso_pu_bacteria 2599185214 2599622780 752
159 iso_pu_bacteria 2599185226 2599671259 752
160 iso_pu_bacteria 2599185227 2599679704 752
161 iso_pu_bacteria 2599185229 2599691720 752
162 iso_pu_bacteria 2818991446 2819599884 752
163 iso_pu_bacteria 2885198086 2885204727 752
164 iso_pu_bacteria 2885211737 2885218586 752
165 iso_pu_bacteria 2899924645 2899926624 752
166 iso_pu_bacteria 2928037797 2928044290 752
167 iso_pu_bacteria 2928044640 2928051413 752
168 iso_pu_bacteria 2928051484 2928052391 752
169 iso_pu_bacteria 2928064002 2928064942 752
170 iso_pu_bacteria 2928070936 2928074575 752
171 3300048909 Ga0496106_0000425 Ga0496106_0000425_5484_7751 755
172 3300048924 Ga0496121_0002234 Ga0496121_0002234_22480_24747 755
173 3300048929 Ga0496126_0001830 Ga0496126_0001830_7737_10013 755
174 3300002987 JGI25159J45721_1000793 JGI25159J45721_100079311 756
175 3300003187 JGI25151J46595_10004344 JGI25151J46595_100043445 756
176 3300003215 JGI25153J46596_10004489 JGI25153J46596_100044895 756
177 3300003354 JGI25160J50197_1002272 JGI25160J50197_10022726 756
178 3300003761 Ga0055535_1001667 Ga0055535_10016676 756
179 3300003762 Ga0055542_1000052 Ga0055542_10000526 756
180 3300003771 Ga0055526_1002176 Ga0055526_100217611 756
181 3300003773 Ga0055537_1001213 Ga0055537_10012136 756
182 3300003775 Ga0055524_1001478 Ga0055524_100147811 756
183 3300003784 Ga0055534_1001158 Ga0055534_10011586 756
184 3300003790 Ga0055528_1002140 Ga0055528_10021406 756
185 3300004625 Ga0055543_1000790 Ga0055543_100079011 756
186 3300005262 Ga0065165_1002452 Ga0065165_100245211 756
187 3300009148 Ga0105243_10000443 Ga0105243_100004435 756
188 3300013102 Ga0157371_10034435 Ga0157371_100344352 756
189 3300025228 Ga0209672_102894 Ga0209672_1028943 756
190 3300025242 Ga0209258_100009 Ga0209258_100009159 756
191 3300025245 Ga0207425_1000294 Ga0207425_100029428 756
192 3300025254 Ga0209148_1000007 Ga0209148_1000007159 756
193 3300025258 Ga0209129_1000083 Ga0209129_10000837 756
194 3300025263 Ga0209565_1000194 Ga0209565_100019464 756
195 3300025273 Ga0209673_1000412 Ga0209673_10004127 756
196 3300025284 Ga0209130_1001006 Ga0209130_100100613 756
197 3300025291 Ga0209675_1000304 Ga0209675_10003047 756
198 3300025294 Ga0209025_1000492 Ga0209025_10004927 756
199 3300025295 Ga0209564_1000244 Ga0209564_1000244122 756
200 3300025297 Ga0209758_1000132 Ga0209758_10001327 756
201 3300025299 Ga0209256_1000192 Ga0209256_10001927 756
202 3300025302 Ga0207426_1000385 Ga0207426_10003857 756
203 3300025303 Ga0209051_1002423 Ga0209051_100242311 756
204 3300025304 Ga0209257_1002378 Ga0209257_100237811 756
205 3300048921 Ga0496118_0004162 Ga0496118_0004162_7620_9890 756

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20256

MoCoBD_2

Molybdopterin cofactor-binding domain

637

719

0.91

PF02738

MoCoBD_1

Molybdopterin cofactor-binding domain

341

519

0.9

PF20256

MoCoBD_2

Molybdopterin cofactor-binding domain

17

105

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5g5h-assembly1.cif.gz_C escherichia coli periplasmic aldehyde oxidase r440h mutant 0.8692 226 753
8gy3-assembly1.cif.gz_C cryo-em structure of membrane-bound aldehyde dehydrogenase from gluconobacter oxydans 0.868 33 754
5g5g-assembly1.cif.gz_C escherichia coli periplasmic aldehyde oxidase 0.8539 220 753
8gy3-assembly1.cif.gz_C cryo-em structure of membrane-bound aldehyde dehydrogenase from gluconobacter oxydans 0.8485 33 754
1ffv-assembly1.cif.gz_E carbon monoxide dehydrogenase from hydrogenophaga pseudoflava 0.845 227 752
ID Description Score Start End Superfamily
3hrdF01 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9398 616 753 3.30.365.10
af_Q46799_603_751_3.30.365.10 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9307 628 753 3.30.365.10
1rm6D04 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9109 555 753 3.30.365.10
2w55F03 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.8932 390 475 3.30.365.10
1sb3D01 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.8873 385 473 3.30.365.10
ID Description Score Start End GO Terms
AF-W7VR31-F1-model_v4 Isoquinoline 1-oxidoreductase subunit beta (EC 1.3.99.16) 0.9936 622 754 GO:0047121
AF-A0A359EA85-F1-model_v4 Aldehyde oxidase/xanthine dehydrogenase second molybdopterin binding domain-containing protein 0.9916 643 754 GO:0016491
AF-A0A349LIZ9-F1-model_v4 Aldehyde oxidase/xanthine dehydrogenase second molybdopterin binding domain-containing protein 0.9891 645 755 GO:0016491
AF-A0A177RPR4-F1-model_v4 deleted 0.984 600 753
AF-A0A2R7SNA6-F1-model_v4 deleted 0.9789 612 753

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Predicted Structure (AlphaFold2)

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