F313134

General Info

Members Datasets Scaffolds Average Seq Length
204 136 408 444

Family's Representative Sequence

Representative Sequence 3300053139|Ga0500568_0003773|Ga0500568_0003773_1831_3231
Length 466
Sequence VVHRQEFAVYGASWRNDLAAGSIVFVTKKALSRRALLRGMGTAVALPFLDSMVPALAQAPKSPVRMAFVYVPNGMDMRNWSLDYEGPLAALSPIMKPMEVLKKDTLLLGNLTHNTGRALLDGAGDHGRCSGSYLTGVQVRKTMTDILASVSMDQVIANKIGSATRFASLELGLEDARQAGDCDSGYSCAYTNNLAWKSSTQPLPPILEPRQLFERLFGDGVAMSPEARQRQRKFRRSILDFVIEDARTLQGQLGPTDNRKLDEYMTSIREVEQQIEKSESEAKVDPHMERPYGTPPDFAEHFKLMADMLTIAFQADLTRVATFLVTHEGTSRAYRELGIDDGHHPLTHHRNQVDMMDKVTRINTYHVEQFSKWMQRMKATQEANGSVLDSSIIVYGAGLADPNNHLHENLPTMIVGNGGGFLKTGRNVVYRKETPMCNLFLSMMDRMGAPQEHFGDSTGYLDQLGA

Samples

Sample ID Description Type Environment
1 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300036457 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
93 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
118 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
119 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
124 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
125 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
126 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
133 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.04
Metatranscriptomes 1.96
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.94
Nodule 0
Rhizoplane 1.96
Rhizosphere 95.1
Stem 0
Stem Tuber 0
Unclassified 20.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500568_0003773 3300053139 Bacteria 8293
2 Ga0058863_10009630 3300004799 Unclassified 3058
3 Ga0058862_10026916 3300004803 Unclassified 2186
4 Ga0065712_10079963 3300005290 Bacteria 3160
5 Ga0065715_10102723 3300005293 Bacteria 3090
6 Ga0065707_10119625 3300005295 Unclassified 2152
7 Ga0070658_10008713 3300005327 Bacteria 8146
8 Ga0070658_10161810 3300005327 Bacteria 1878
9 Ga0070683_100088770 3300005329 Unclassified 2901
10 Ga0070683_100147850 3300005329 Unclassified 2227
11 Ga0070690_100039025 3300005330 Unclassified 2999
12 Ga0070690_100042561 3300005330 Unclassified 2877
13 Ga0070690_100107098 3300005330 Bacteria 1860
14 Ga0068869_100013462 3300005334 Bacteria 5442
15 Ga0068869_100047860 3300005334 Unclassified 3090
16 Ga0070666_10068177 3300005335 Unclassified 2417
17 Ga0068868_100129098 3300005338 Unclassified 2067
18 Ga0070689_100050238 3300005340 Unclassified 3222
19 Ga0070689_100096579 3300005340 Bacteria 2336
20 Ga0070669_100047957 3300005353 Unclassified 3117
21 Ga0070669_100098469 3300005353 Unclassified 2203
22 Ga0070675_100007027 3300005354 Bacteria 8654
23 Ga0070675_100013825 3300005354 Bacteria 6355
24 Ga0070675_100076704 3300005354 Unclassified 2781
25 Ga0070674_100014844 3300005356 Bacteria 4848
26 Ga0070688_100014629 3300005365 Bacteria 4449
27 Ga0070688_100094388 3300005365 Unclassified 1961
28 Ga0070700_100161440 3300005441 Bacteria 1543
29 Ga0070681_10002851 3300005458 Bacteria 15976
30 Ga0070681_10012447 3300005458 Archaea 8440
31 Ga0068867_100030539 3300005459 Bacteria 3886
32 Ga0070685_10103894 3300005466 Bacteria 1739
33 Ga0070699_100086084 3300005518 Bacteria 2742
34 Ga0070679_100101568 3300005530 Unclassified 2863
35 Ga0070679_100242489 3300005530 Bacteria 1760
36 Ga0070684_100000011 3300005535 Bacteria 170628
37 Ga0070684_100027787 3300005535 Unclassified 4779
38 Ga0068853_100016850 3300005539 Bacteria 6021
39 Ga0070696_100000854 3300005546 Bacteria 19683
40 Ga0068855_100053083 3300005563 Bacteria 4770
41 Ga0068855_100072896 3300005563 Bacteria 3991
42 Ga0068857_100221758 3300005577 Bacteria 1727
43 Ga0070702_100141648 3300005615 Bacteria 1532
44 Ga0068859_100000857 3300005617 Bacteria 30967
45 Ga0068859_100020511 3300005617 Bacteria 6632
46 Ga0068859_100062857 3300005617 Bacteria 3743
47 Ga0068859_100292752 3300005617 Unclassified 1721
48 Ga0068861_100041090 3300005719 Bacteria 3463
49 Ga0068860_100038265 3300005843 Bacteria 4589
50 Ga0068862_100029316 3300005844 Bacteria 4637
51 Ga0081455_10029891 3300005937 Bacteria 4961
52 Ga0081455_10162378 3300005937 Bacteria 1711
53 Ga0075370_10022096 3300006353 Bacteria 3490
54 Ga0068871_100188268 3300006358 Unclassified 1776
55 Ga0075428_100008924 3300006844 Bacteria 11124
56 Ga0075428_100066200 3300006844 Bacteria 3956
57 Ga0075430_100005615 3300006846 Bacteria 10588
58 Ga0075430_100012321 3300006846 Bacteria 7274
59 Ga0075431_100000825 3300006847 Bacteria 27053
60 Ga0075431_100005560 3300006847 Bacteria 12442
61 Ga0075431_100012815 3300006847 Bacteria 8464
62 Ga0075431_100144948 3300006847 Bacteria 2447
63 Ga0075429_100038690 3300006880 Bacteria 4153
64 Ga0075436_100001704 3300006914 Bacteria 15044
65 Ga0097620_100000857 3300006931 Bacteria 30967
66 Ga0097620_100020511 3300006931 Bacteria 6632
67 Ga0097620_100062857 3300006931 Bacteria 3743
68 Ga0097620_100292774 3300006931 Unclassified 1721
69 Ga0105240_10017395 3300009093 Bacteria 9690
70 Ga0105240_10062105 3300009093 Bacteria 4652
71 Ga0111539_10000553 3300009094 Bacteria 47851
72 Ga0111539_10019875 3300009094 Bacteria 8276
73 Ga0111539_10022904 3300009094 Bacteria 7670
74 Ga0111539_10042611 3300009094 Bacteria 5448
75 Ga0111539_10080943 3300009094 Bacteria 3820
76 Ga0105245_10086739 3300009098 Bacteria 2871
77 Ga0114129_10000739 3300009147 Bacteria 41517
78 Ga0114129_10111397 3300009147 Unclassified 3776
79 Ga0114129_10177193 3300009147 Bacteria 2903
80 Ga0105241_10146245 3300009174 Bacteria 1929
81 Ga0105237_10035061 3300009545 Bacteria 5078
82 Ga0157369_10001793 3300013105 Bacteria 25982
83 Ga0157369_10152423 3300013105 Bacteria 2443
84 Ga0157374_10007701 3300013296 Bacteria 9195
85 Ga0157378_10217503 3300013297 Bacteria 1815
86 Ga0157375_10248041 3300013308 Bacteria 1941
87 Ga0163163_10047557 3300014325 Bacteria 4218
88 Ga0157380_10054158 3300014326 Bacteria 3183
89 Ga0157377_10011528 3300014745 Bacteria 4416
90 Ga0206356_10010986 3300020070 Bacteria 4232
91 Ga0207697_10000251 3300025315 Bacteria 29559
92 Ga0207688_10005141 3300025901 Bacteria 7110
93 Ga0207705_10054222 3300025909 Bacteria 2890
94 Ga0207705_10102490 3300025909 Unclassified 2107
95 Ga0207707_10003520 3300025912 Bacteria 13865
96 Ga0207707_10074318 3300025912 Unclassified 2964
97 Ga0207695_10090414 3300025913 Unclassified 3077
98 Ga0207652_10030501 3300025921 Unclassified 4516
99 Ga0207652_10064346 3300025921 Bacteria 3173
100 Ga0207659_10002354 3300025926 Bacteria 11258
101 Ga0207659_10002833 3300025926 Bacteria 10351
102 Ga0207706_10055526 3300025933 Unclassified 3492
103 Ga0207686_10013664 3300025934 Bacteria 4497
104 Ga0207670_10011336 3300025936 Bacteria 5170
105 Ga0207669_10016145 3300025937 Bacteria 3786
106 Ga0207704_10095250 3300025938 Bacteria 1968
107 Ga0207691_10014957 3300025940 Bacteria 7391
108 Ga0207691_10060802 3300025940 Bacteria 3432
109 Ga0207711_10383120 3300025941 Unclassified 1305
110 Ga0207689_10084449 3300025942 Bacteria 2610
111 Ga0207661_10000025 3300025944 Bacteria 195900
112 Ga0207661_10088221 3300025944 Unclassified 2578
113 Ga0207661_10131362 3300025944 Unclassified 2145
114 Ga0207667_10029800 3300025949 Bacteria 5912
115 Ga0207667_10160118 3300025949 Bacteria 2316
116 Ga0207651_10006652 3300025960 Bacteria 6081
117 Ga0207703_10156441 3300026035 Bacteria 1992
118 Ga0207703_10247289 3300026035 Unclassified 1606
119 Ga0207639_10055679 3300026041 Bacteria 3028
120 Ga0207678_10036436 3300026067 Bacteria 4282
121 Ga0207702_10028691 3300026078 Unclassified 4627
122 Ga0207648_10031119 3300026089 Bacteria 4719
123 Ga0207674_10241292 3300026116 Bacteria 1754
124 Ga0207675_100009075 3300026118 Bacteria 9332
125 Ga0207675_100248061 3300026118 Unclassified 1722
126 Ga0207683_10014032 3300026121 Bacteria 6831
127 Ga0207683_10188224 3300026121 Bacteria 1873
128 Ga0207428_10007393 3300027907 Bacteria 10017
129 Ga0207428_10066028 3300027907 Bacteria 2851
130 Ga0207428_10117115 3300027907 Unclassified 2045
131 Ga0268265_10061884 3300028380 Bacteria 2874
132 Ga0268265_10150476 3300028380 Unclassified 1962
133 Ga0268264_10028596 3300028381 Bacteria 4561
134 Ga0265331_10030021 3300031250 Bacteria 2709
135 Ga0265316_10029623 3300031344 Bacteria 4498
136 Ga0307408_100001432 3300031548 Bacteria 17746
137 Ga0307408_100021428 3300031548 Bacteria 4373
138 Ga0307408_100163033 3300031548 Bacteria 1772
139 Ga0373937_0155685 3300036401 Bacteria 2142
140 Ga0265778_000733 3300036457 Unclassified 2699
141 Ga0373925_0060140 3300037068 Bacteria 2853
142 Ga0439441_018111 3300042001 Bacteria 1271
143 Ga0439435_0021607 3300042436 Bacteria 1672
144 Ga0495580_0064025 3300046472 Bacteria 2578
145 Ga0495608_0054892 3300046511 Unclassified 2633
146 Ga0495652_0184696 3300046529 Bacteria 1597
147 Ga0495667_0002123 3300046559 Bacteria 13194
148 Ga0495657_0013720 3300046675 Bacteria 5968
149 Ga0495674_0130112 3300047319 Unclassified 2121
150 Ga0496104_0349182 3300048907 Bacteria 1392
151 Ga0496114_0061473 3300048917 Bacteria 3142
152 Ga0496115_0026719 3300048918 Bacteria 4508
153 Ga0496115_0104928 3300048918 Bacteria 2319
154 Ga0501032_0003233 3300049569 Bacteria 12529
155 Ga0501033_0038323 3300049570 Bacteria 3585
156 Ga0501034_0022030 3300049571 Bacteria 6491
157 Ga0501036_0075263 3300049572 Bacteria 2855
158 Ga0501038_0092909 3300049574 Bacteria 2525
159 Ga0501039_0008453 3300049575 Bacteria 7844
160 Ga0501043_0004484 3300049579 Bacteria 11340
161 Ga0501046_0020177 3300049580 Bacteria 5516
162 Ga0501046_0180729 3300049580 Bacteria 1577
163 Ga0501047_0003671 3300049581 Bacteria 14466
164 Ga0501047_0004933 3300049581 Bacteria 12530
165 Ga0501047_0135907 3300049581 Unclassified 2339
166 Ga0501048_0013097 3300049582 Bacteria 6157
167 Ga0501071_0099688 3300049587 Bacteria 2141
168 Ga0501073_0010135 3300049589 Bacteria 6925
169 Ga0501075_0007934 3300049591 Bacteria 7375
170 Ga0501075_0020177 3300049591 Bacteria 4843
171 Ga0501076_0022771 3300049592 Bacteria 4818
172 Ga0501217_027713 3300049661 Bacteria 1376
173 Ga0501235_021242 3300049669 Bacteria 1443
174 Ga0501221_012685 3300049704 Bacteria 1537
175 Ga0501080_0241439 3300049742 Bacteria 1649
176 Ga0501080_0258952 3300049742 Bacteria 1585
177 Ga0501083_0000811 3300049744 Bacteria 20488
178 Ga0501083_0002709 3300049744 Bacteria 12225
179 Ga0501044_0144205 3300049823 Bacteria 2368
180 nmdc:mga0yw44_53131_c1 3300050492 Unclassified 2459
181 nmdc:mga06z11_56137_c1 3300050494 Bacteria 2036
182 nmdc:mga04h51_33291_c1 3300050495 Bacteria 1640
183 nmdc:mga07m45_91731_c1 3300050496 Bacteria 1741
184 nmdc:mga05p37_160320_c1 3300050507 Bacteria 2748
185 nmdc:mga05p37_4663_c1 3300050507 Bacteria 16018
186 nmdc:mga05p37_494300_c1 3300050507 Unclassified 1406
187 nmdc:mga09592_5231_c1 3300050508 Bacteria 10547
188 nmdc:mga0qj67_10617_c1 3300050509 Bacteria 6880
189 nmdc:mga0qj67_33355_c1 3300050509 Bacteria 4017
190 nmdc:mga06r32_125991_c1 3300050510 Unclassified 2530
191 nmdc:mga06r32_13507_c1 3300050510 Bacteria 7402
192 nmdc:mga06r32_195495_c1 3300050510 Bacteria 2010
193 nmdc:mga08y16_130046_c1 3300050511 Bacteria 2619
194 nmdc:mga08y16_21779_c1 3300050511 Bacteria 6763
195 nmdc:mga08y16_40452_c1 3300050511 Bacteria 4887
196 nmdc:mga08y16_40491_c1 3300050511 Bacteria 4885
197 nmdc:mga08x19_1454_c1 3300050514 Bacteria 14661
198 nmdc:mga0a205_106225_c1 3300050515 Bacteria 2706
199 nmdc:mga0a205_29289_c1 3300050515 Bacteria 5268
200 Ga0501084_0015731 3300054114 Bacteria 6273
201 Ga0501082_0001516 3300060353 Bacteria 20457
202 Ga0501082_0028373 3300060353 Bacteria 4823
203 Ga0501082_0073418 3300060353 Bacteria 2947
204 Ga0530510_0073917 3300061734 Bacteria 2475
205 Ga0500568_0003773
206 Ga0058863_10009630
207 Ga0058862_10026916
208 Ga0065712_10079963
209 Ga0065715_10102723
210 Ga0065707_10119625
211 Ga0070658_10008713
212 Ga0070658_10161810
213 Ga0070683_100088770
214 Ga0070683_100147850
215 Ga0070690_100039025
216 Ga0070690_100042561
217 Ga0070690_100107098
218 Ga0068869_100013462
219 Ga0068869_100047860
220 Ga0070666_10068177
221 Ga0068868_100129098
222 Ga0070689_100050238
223 Ga0070689_100096579
224 Ga0070669_100047957
225 Ga0070669_100098469
226 Ga0070675_100007027
227 Ga0070675_100013825
228 Ga0070675_100076704
229 Ga0070674_100014844
230 Ga0070688_100014629
231 Ga0070688_100094388
232 Ga0070700_100161440
233 Ga0070681_10002851
234 Ga0070681_10012447
235 Ga0068867_100030539
236 Ga0070685_10103894
237 Ga0070699_100086084
238 Ga0070679_100101568
239 Ga0070679_100242489
240 Ga0070684_100000011
241 Ga0070684_100027787
242 Ga0068853_100016850
243 Ga0070696_100000854
244 Ga0068855_100053083
245 Ga0068855_100072896
246 Ga0068857_100221758
247 Ga0070702_100141648
248 Ga0068859_100000857
249 Ga0068859_100020511
250 Ga0068859_100062857
251 Ga0068859_100292752
252 Ga0068861_100041090
253 Ga0068860_100038265
254 Ga0068862_100029316
255 Ga0081455_10029891
256 Ga0081455_10162378
257 Ga0075370_10022096
258 Ga0068871_100188268
259 Ga0075428_100008924
260 Ga0075428_100066200
261 Ga0075430_100005615
262 Ga0075430_100012321
263 Ga0075431_100000825
264 Ga0075431_100005560
265 Ga0075431_100012815
266 Ga0075431_100144948
267 Ga0075429_100038690
268 Ga0075436_100001704
269 Ga0097620_100000857
270 Ga0097620_100020511
271 Ga0097620_100062857
272 Ga0097620_100292774
273 Ga0105240_10017395
274 Ga0105240_10062105
275 Ga0111539_10000553
276 Ga0111539_10019875
277 Ga0111539_10022904
278 Ga0111539_10042611
279 Ga0111539_10080943
280 Ga0105245_10086739
281 Ga0114129_10000739
282 Ga0114129_10111397
283 Ga0114129_10177193
284 Ga0105241_10146245
285 Ga0105237_10035061
286 Ga0157369_10001793
287 Ga0157369_10152423
288 Ga0157374_10007701
289 Ga0157378_10217503
290 Ga0157375_10248041
291 Ga0163163_10047557
292 Ga0157380_10054158
293 Ga0157377_10011528
294 Ga0206356_10010986
295 Ga0207697_10000251
296 Ga0207688_10005141
297 Ga0207705_10054222
298 Ga0207705_10102490
299 Ga0207707_10003520
300 Ga0207707_10074318
301 Ga0207695_10090414
302 Ga0207652_10030501
303 Ga0207652_10064346
304 Ga0207659_10002354
305 Ga0207659_10002833
306 Ga0207706_10055526
307 Ga0207686_10013664
308 Ga0207670_10011336
309 Ga0207669_10016145
310 Ga0207704_10095250
311 Ga0207691_10014957
312 Ga0207691_10060802
313 Ga0207711_10383120
314 Ga0207689_10084449
315 Ga0207661_10000025
316 Ga0207661_10088221
317 Ga0207661_10131362
318 Ga0207667_10029800
319 Ga0207667_10160118
320 Ga0207651_10006652
321 Ga0207703_10156441
322 Ga0207703_10247289
323 Ga0207639_10055679
324 Ga0207678_10036436
325 Ga0207702_10028691
326 Ga0207648_10031119
327 Ga0207674_10241292
328 Ga0207675_100009075
329 Ga0207675_100248061
330 Ga0207683_10014032
331 Ga0207683_10188224
332 Ga0207428_10007393
333 Ga0207428_10066028
334 Ga0207428_10117115
335 Ga0268265_10061884
336 Ga0268265_10150476
337 Ga0268264_10028596
338 Ga0265331_10030021
339 Ga0265316_10029623
340 Ga0307408_100001432
341 Ga0307408_100021428
342 Ga0307408_100163033
343 Ga0373937_0155685
344 Ga0265778_000733
345 Ga0373925_0060140
346 Ga0439441_018111
347 Ga0439435_0021607
348 Ga0495580_0064025
349 Ga0495608_0054892
350 Ga0495652_0184696
351 Ga0495667_0002123
352 Ga0495657_0013720
353 Ga0495674_0130112
354 Ga0496104_0349182
355 Ga0496114_0061473
356 Ga0496115_0026719
357 Ga0496115_0104928
358 Ga0501032_0003233
359 Ga0501033_0038323
360 Ga0501034_0022030
361 Ga0501036_0075263
362 Ga0501038_0092909
363 Ga0501039_0008453
364 Ga0501043_0004484
365 Ga0501046_0020177
366 Ga0501046_0180729
367 Ga0501047_0003671
368 Ga0501047_0004933
369 Ga0501047_0135907
370 Ga0501048_0013097
371 Ga0501071_0099688
372 Ga0501073_0010135
373 Ga0501075_0007934
374 Ga0501075_0020177
375 Ga0501076_0022771
376 Ga0501217_027713
377 Ga0501235_021242
378 Ga0501221_012685
379 Ga0501080_0241439
380 Ga0501080_0258952
381 Ga0501083_0000811
382 Ga0501083_0002709
383 Ga0501044_0144205
384 nmdc:mga0yw44_53131_c1
385 nmdc:mga06z11_56137_c1
386 nmdc:mga04h51_33291_c1
387 nmdc:mga07m45_91731_c1
388 nmdc:mga05p37_160320_c1
389 nmdc:mga05p37_4663_c1
390 nmdc:mga05p37_494300_c1
391 nmdc:mga09592_5231_c1
392 nmdc:mga0qj67_10617_c1
393 nmdc:mga0qj67_33355_c1
394 nmdc:mga06r32_125991_c1
395 nmdc:mga06r32_13507_c1
396 nmdc:mga06r32_195495_c1
397 nmdc:mga08y16_130046_c1
398 nmdc:mga08y16_21779_c1
399 nmdc:mga08y16_40452_c1
400 nmdc:mga08y16_40491_c1
401 nmdc:mga08x19_1454_c1
402 nmdc:mga0a205_106225_c1
403 nmdc:mga0a205_29289_c1
404 Ga0501084_0015731
405 Ga0501082_0001516
406 Ga0501082_0028373
407 Ga0501082_0073418
408 Ga0530510_0073917

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07586

HXXSHH

Protein of unknown function (DUF1552)

65

371

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7d89-assembly1.cif.gz_A crystal structure of an inactivated double mutant (e182ae280a) of a novel thermostable gh10 xylanase xyna 0.7101 276 306
2zkt-assembly1.cif.gz_A structure of ph0037 protein from pyrococcus horikoshii 0.5628 273 437
5udy-assembly1.cif.gz_A human alkaline sphingomyelinase (alk-smase, enpp7, npp7) 0.529 267 379
4uop-assembly1.cif.gz_A crystal structure of the lipoteichoic acid synthase ltap from listeria monocytogenes 0.5245 29 449
8j0h-assembly8.cif.gz_H crystal structure of the fission yeast rex1bd protein(c4h3.06) 0.5226 190 298
ID Description Score Start End Superfamily
5udyA01 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.6254 267 437 3.40.720.10
4uopA02 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.5711 40 435 3.40.720.10
af_P39401_154_449_3.40.720.10 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.5642 40 433 3.40.720.10
af_Q2R8W6_14_135_1.20.5.4130 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.5638 220 298 1.20.5.4130
2zktA01 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.5628 273 437 3.40.720.10
ID Description Score Start End GO Terms
AF-A0A2V8DTC8-F1-model_v4 DUF1552 domain-containing protein 0.9789 276 407
AF-A0A383D054-F1-model_v4 DUF1552 domain-containing protein 0.978 312 443
AF-A0A4Q2YC30-F1-model_v4 DUF1552 domain-containing protein 0.9767 281 443
AF-A0A2V8C5N5-F1-model_v4 DUF1552 domain-containing protein 0.9761 315 430
AF-A0A356FG59-F1-model_v4 DUF1552 domain-containing protein 0.974 325 444

Map