F313122

General Info

Members Datasets Scaffolds Average Seq Length
204 149 408 309

Family's Representative Sequence

Representative Sequence 3300053090|Ga0500646_0003607|Ga0500646_0003607_2832_3920
Length 342
Sequence VDGARYQYGVAVRTASTLFDIGIVDLGADLKDHPIPSARARALVEGAYDTHVHVAPDVMPRLIDDLSLARRFEDVGLAGFVLKSHYLPTAERAAVVRAAIPGVDVVGALTLNGSVGGMNPAAVEIAARAGARVVWFPTVDSANQVSSRATEPEGATPPMWAALQDDLKAQGIEPTPVEVLDADGEVRPEVVSVLRLLARHNLVLATGHLSAREILAVVTAAVREGVARIVVTHPEFTSQRLTVDQQRELADLGALMERCFTTPYTGKVDWSRMVEHVRAVGAAHSVLSSDLGQPFNPPVEDGLALMADWFLEAGFSEDEIQQMAVVNSRGLILLPAASTIDG

Samples

Sample ID Description Type Environment
1 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
58 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
61 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
62 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
63 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
64 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
66 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
81 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
90 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
91 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
102 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
105 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
135 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
136 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
137 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
138 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
139 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
140 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
143 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
144 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
145 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
146 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
147 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
148 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
149 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.08
Metatranscriptomes 0
Isolates 3.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.43
Nodule 0
Rhizoplane 5.88
Rhizosphere 66.67
Stem 0
Stem Tuber 0.49
Unclassified 1.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500646_0003607 3300053090 Bacteria 3965
2 JGI25406J46586_10001658 3300003203 Bacteria 10515
3 rootH1_10040092 3300003316 Bacteria 1656
4 rootL2_10099902 3300003322 Bacteria 1630
5 Ga0065707_10143270 3300005295 Bacteria 1743
6 Ga0070683_100001390 3300005329 Bacteria 18569
7 Ga0068869_100053077 3300005334 Bacteria 2945
8 Ga0070668_100000441 3300005347 Bacteria 27436
9 Ga0070668_100070861 3300005347 Bacteria 2714
10 Ga0070668_100198766 3300005347 Bacteria 1645
11 Ga0070667_100308242 3300005367 Bacteria 1427
12 Ga0070714_100121148 3300005435 Bacteria 2327
13 Ga0070713_100154453 3300005436 Unclassified 2044
14 Ga0070710_10144049 3300005437 Bacteria 1464
15 Ga0070711_100065315 3300005439 Bacteria 2545
16 Ga0070679_100037213 3300005530 Bacteria 4833
17 Ga0070679_100063440 3300005530 Bacteria 3682
18 Ga0070684_100013055 3300005535 Bacteria 6683
19 Ga0070665_100118623 3300005548 Bacteria 2648
20 Ga0070704_100319257 3300005549 Bacteria 1301
21 Ga0068859_100202067 3300005617 Bacteria 2072
22 Ga0068861_100072752 3300005719 Bacteria 2668
23 Ga0068863_100172515 3300005841 Bacteria 2075
24 Ga0068858_100015503 3300005842 Bacteria 7167
25 Ga0068858_100048756 3300005842 Bacteria 3923
26 Ga0068860_100023323 3300005843 Bacteria 5981
27 Ga0068862_100022277 3300005844 Bacteria 5298
28 Ga0081455_10016450 3300005937 Bacteria 7141
29 Ga0081540_1011983 3300005983 Bacteria 5747
30 Ga0081539_10000079 3300005985 Bacteria 223413
31 Ga0070717_10295406 3300006028 Bacteria 1439
32 Ga0070712_100016154 3300006175 Bacteria 4818
33 Ga0070712_100161159 3300006175 Bacteria 1732
34 Ga0097620_100202082 3300006931 Bacteria 2072
35 Ga0105247_10006849 3300009101 Bacteria 7022
36 Ga0105247_10056935 3300009101 Bacteria 2416
37 Ga0105248_10062303 3300009177 Bacteria 4189
38 Ga0105248_10244175 3300009177 Bacteria 2021
39 Ga0105248_10256699 3300009177 Bacteria 1968
40 Ga0105035_101599 3300009988 Bacteria 1590
41 Ga0157379_10025002 3300014968 Bacteria 5302
42 Ga0157379_10085614 3300014968 Bacteria 2825
43 Ga0213876_10041895 3300021384 Bacteria 2419
44 Ga0213876_10134391 3300021384 Bacteria 1315
45 Ga0213875_10001003 3300021388 Bacteria 20071
46 Ga0213875_10001861 3300021388 Bacteria 13118
47 Ga0213875_10004906 3300021388 Bacteria 7262
48 Ga0213875_10054584 3300021388 Bacteria 1871
49 Ga0207710_10042824 3300025900 Bacteria 2012
50 Ga0207699_10255023 3300025906 Bacteria 1210
51 Ga0207693_10002252 3300025915 Bacteria 16784
52 Ga0207663_10019760 3300025916 Bacteria 3803
53 Ga0207652_10029285 3300025921 Bacteria 4603
54 Ga0207700_10061762 3300025928 Bacteria 2843
55 Ga0207664_10069505 3300025929 Bacteria 2832
56 Ga0207664_10122635 3300025929 Bacteria 2177
57 Ga0207711_10181335 3300025941 Bacteria 1915
58 Ga0207661_10001492 3300025944 Bacteria 15841
59 Ga0207679_10578198 3300025945 Bacteria 1010
60 Ga0207668_10003529 3300025972 Bacteria 9188
61 Ga0207703_10004892 3300026035 Bacteria 10891
62 Ga0207703_10034837 3300026035 Bacteria 3997
63 Ga0207641_10099672 3300026088 Bacteria 2557
64 Ga0268266_10096516 3300028379 Bacteria 2598
65 Ga0268264_10042645 3300028381 Bacteria 3756
66 Ga0307517_10197456 3300028786 Bacteria 1264
67 Ga0307515_10002464 3300028794 Bacteria 40245
68 Ga0307515_10052033 3300028794 Bacteria 6086
69 Ga0307515_10231834 3300028794 Bacteria 1637
70 Ga0307512_10006265 3300030522 Bacteria 12105
71 Ga0307512_10006858 3300030522 Bacteria 11416
72 Ga0307512_10020469 3300030522 Bacteria 5988
73 Ga0307513_10006803 3300031456 Bacteria 14908
74 Ga0307513_10046755 3300031456 Bacteria 4714
75 Ga0307513_10087092 3300031456 Bacteria 3199
76 Ga0307509_10027903 3300031507 Bacteria 6279
77 Ga0307509_10308845 3300031507 Bacteria 1325
78 Ga0307508_10143427 3300031616 Bacteria 1992
79 Ga0307516_10019059 3300031730 Bacteria 7117
80 Ga0307516_10028033 3300031730 Bacteria 5705
81 Ga0307516_10221068 3300031730 Bacteria 1603
82 Ga0307518_10014190 3300031838 Bacteria 5693
83 Ga0307518_10139124 3300031838 Bacteria 1696
84 Ga0307410_10306882 3300031852 Bacteria 1254
85 Ga0307409_100377816 3300031995 Bacteria 1346
86 Ga0307507_10013703 3300033179 Bacteria 9795
87 Ga0307510_10092212 3300033180 Bacteria 2867
88 Ga0373940_0014751 3300035088 Bacteria 1911
89 Ga0373923_0074471 3300035111 Bacteria 1464
90 Ga0373954_0191420 3300035118 Bacteria 1004
91 Ga0373942_0000950 3300035207 Bacteria 7899
92 Ga0373935_0022147 3300035692 Bacteria 3894
93 Ga0373937_0015129 3300036401 Bacteria 6818
94 Ga0436364_0045875 3300037853 Bacteria 4610
95 Ga0436364_0053785 3300037853 Bacteria 3591
96 Ga0436364_0140372 3300037853 Unclassified 1113
97 Ga0436364_0273664 3300037853 Bacteria 21979
98 Ga0436364_0462954 3300037853 Bacteria 21686
99 Ga0436364_0566500 3300037853 Bacteria 56428
100 Ga0436364_1264011 3300037853 Bacteria 7715
101 Ga0436364_1438770 3300037853 Bacteria 2012
102 Ga0436365_0468896 3300039437 Bacteria 11494
103 Ga0436365_0530409 3300039437 Bacteria 4710
104 Ga0436365_0897074 3300039437 Bacteria 6301
105 Ga0436363_0275177 3300039450 Bacteria 88978
106 Ga0436363_1060343 3300039450 Bacteria 3809
107 Ga0436362_0998221 3300039453 Bacteria 7312
108 Ga0436362_1194444 3300039453 Bacteria 3205
109 Ga0466968_0124266 3300044735 Bacteria 1170
110 Ga0466959_0211459 3300045049 Bacteria 1348
111 Ga0466967_0002484 3300045976 Bacteria 11509
112 Ga0466967_0012175 3300045976 Bacteria 6564
113 Ga0466967_0071977 3300045976 Bacteria 3097
114 Ga0495592_0061694 3300046454 Bacteria 2755
115 Ga0495629_0000883 3300046459 Bacteria 24203
116 Ga0495651_0000659 3300046462 Bacteria 26765
117 Ga0495653_0072749 3300046463 Bacteria 2566
118 Ga0495662_0008399 3300046476 Bacteria 5079
119 Ga0495608_0167363 3300046511 Bacteria 1395
120 Ga0495628_0016964 3300046516 Bacteria 6068
121 Ga0495630_0169873 3300046517 Bacteria 1661
122 Ga0495640_0064694 3300046533 Bacteria 2472
123 Ga0495587_0147281 3300046536 Bacteria 1342
124 Ga0495667_0026651 3300046559 Bacteria 3895
125 Ga0495634_0044514 3300046642 Bacteria 3004
126 Ga0495634_0070895 3300046642 Bacteria 2296
127 Ga0495635_0001036 3300046663 Bacteria 18402
128 Ga0495657_0001056 3300046675 Bacteria 24095
129 Ga0495657_0059005 3300046675 Bacteria 2546
130 Ga0495599_0063388 3300046678 Bacteria 2310
131 Ga0495646_0009243 3300046680 Bacteria 6254
132 Ga0495646_0029762 3300046680 Bacteria 3412
133 Ga0495613_0112625 3300046689 Bacteria 1959
134 Ga0495600_0000124 3300046809 Bacteria 43037
135 Ga0495600_0072171 3300046809 Bacteria 2255
136 Ga0495581_0037820 3300047315 Bacteria 2793
137 Ga0495604_0056093 3300047317 Bacteria 3034
138 Ga0495674_0012557 3300047319 Bacteria 7980
139 Ga0495674_0284139 3300047319 Bacteria 1355
140 Ga0495680_0042064 3300047322 Bacteria 3628
141 Ga0495683_0008510 3300047323 Bacteria 5486
142 Ga0495675_0063825 3300047444 Bacteria 2330
143 Ga0495675_0168149 3300047444 Bacteria 1348
144 Ga0495684_0047610 3300047471 Bacteria 3279
145 Ga0495593_0064602 3300047673 Bacteria 1910
146 Ga0495614_0000414 3300048089 Bacteria 17463
147 Ga0496101_0296543 3300048904 Bacteria 1266
148 Ga0496104_0012809 3300048907 Bacteria 7553
149 Ga0496104_0064300 3300048907 Bacteria 3480
150 Ga0496105_0094424 3300048908 Bacteria 2470
151 Ga0496105_0455489 3300048908 Bacteria 1009
152 Ga0496108_0000085 3300048911 Bacteria 101144
153 Ga0496109_0067865 3300048912 Bacteria 3268
154 Ga0496110_0019173 3300048913 Bacteria 5752
155 Ga0496112_0138888 3300048915 Bacteria 2400
156 Ga0496113_0031338 3300048916 Bacteria 3858
157 Ga0496114_0317594 3300048917 Unclassified 1376
158 Ga0496115_0184458 3300048918 Bacteria 1724
159 Ga0501032_0168595 3300049569 Bacteria 1436
160 Ga0501032_0252055 3300049569 Bacteria 1146
161 Ga0501033_0001271 3300049570 Bacteria 22520
162 Ga0501033_0267852 3300049570 Bacteria 1208
163 Ga0501034_0004641 3300049571 Bacteria 15217
164 Ga0501036_0000661 3300049572 Bacteria 25323
165 Ga0501037_0079034 3300049573 Bacteria 2387
166 Ga0501038_0014786 3300049574 Bacteria 7109
167 Ga0501039_0234955 3300049575 Bacteria 1441
168 Ga0501040_0012518 3300049576 Bacteria 5560
169 Ga0501040_0300276 3300049576 Bacteria 1148
170 Ga0501042_0001516 3300049578 Bacteria 13741
171 Ga0501042_0105092 3300049578 Bacteria 2032
172 Ga0501043_0005472 3300049579 Bacteria 10261
173 Ga0501046_0000188 3300049580 Bacteria 63345
174 Ga0501046_0145124 3300049580 Bacteria 1793
175 Ga0501046_0349521 3300049580 Bacteria 1074
176 Ga0501047_0036565 3300049581 Bacteria 4746
177 Ga0501048_0015559 3300049582 Bacteria 5619
178 Ga0501071_0018657 3300049587 Bacteria 4808
179 Ga0501072_0156099 3300049588 Unclassified 1819
180 Ga0501074_0012681 3300049590 Bacteria 6129
181 Ga0501074_0013322 3300049590 Bacteria 5980
182 Ga0501076_0135479 3300049592 Bacteria 1999
183 Ga0501081_0040831 3300049743 Bacteria 3176
184 Ga0501044_0013543 3300049823 Bacteria 8815
185 Ga0501044_0460367 3300049823 Bacteria 1177
186 Ga0501045_0033338 3300049824 Bacteria 3733
187 nmdc:mga0rr50_502054_c1 3300050513 Bacteria 1031
188 Ga0495595_0003841 3300053084 Bacteria 5988
189 Ga0500578_0249846 3300053086 Bacteria 1069
190 Ga0500640_004499 3300053095 Bacteria 5070
191 Ga0500641_0027922 3300053096 Bacteria 2200
192 Ga0500594_0024815 3300053118 Bacteria 1531
193 Ga0500588_0002893 3300053146 Bacteria 3562
194 Ga0500600_0146649 3300053149 Bacteria 1180
195 Ga0501084_0051093 3300054114 Bacteria 3459
196 Ga0501084_0121419 3300054114 Bacteria 2197
197 2558912109 2558860112 Bacteria 9931328
198 2738695283 2738541272 Bacteria 6848551
199 2739326357 2738543027 Bacteria 6409078
200 2867317614 2867312974 Bacteria 7058875
201 2867325682 2867319477 Bacteria 7069771
202 2895437656 2895427314 Bacteria 13147766
203 2899376213 2899370129 Bacteria 6781179
204 2990094466 2990088156 Bacteria 6657676
205 Ga0500646_0003607
206 JGI25406J46586_10001658
207 rootH1_10040092
208 rootL2_10099902
209 Ga0065707_10143270
210 Ga0070683_100001390
211 Ga0068869_100053077
212 Ga0070668_100000441
213 Ga0070668_100070861
214 Ga0070668_100198766
215 Ga0070667_100308242
216 Ga0070714_100121148
217 Ga0070713_100154453
218 Ga0070710_10144049
219 Ga0070711_100065315
220 Ga0070679_100037213
221 Ga0070679_100063440
222 Ga0070684_100013055
223 Ga0070665_100118623
224 Ga0070704_100319257
225 Ga0068859_100202067
226 Ga0068861_100072752
227 Ga0068863_100172515
228 Ga0068858_100015503
229 Ga0068858_100048756
230 Ga0068860_100023323
231 Ga0068862_100022277
232 Ga0081455_10016450
233 Ga0081540_1011983
234 Ga0081539_10000079
235 Ga0070717_10295406
236 Ga0070712_100016154
237 Ga0070712_100161159
238 Ga0097620_100202082
239 Ga0105247_10006849
240 Ga0105247_10056935
241 Ga0105248_10062303
242 Ga0105248_10244175
243 Ga0105248_10256699
244 Ga0105035_101599
245 Ga0157379_10025002
246 Ga0157379_10085614
247 Ga0213876_10041895
248 Ga0213876_10134391
249 Ga0213875_10001003
250 Ga0213875_10001861
251 Ga0213875_10004906
252 Ga0213875_10054584
253 Ga0207710_10042824
254 Ga0207699_10255023
255 Ga0207693_10002252
256 Ga0207663_10019760
257 Ga0207652_10029285
258 Ga0207700_10061762
259 Ga0207664_10069505
260 Ga0207664_10122635
261 Ga0207711_10181335
262 Ga0207661_10001492
263 Ga0207679_10578198
264 Ga0207668_10003529
265 Ga0207703_10004892
266 Ga0207703_10034837
267 Ga0207641_10099672
268 Ga0268266_10096516
269 Ga0268264_10042645
270 Ga0307517_10197456
271 Ga0307515_10002464
272 Ga0307515_10052033
273 Ga0307515_10231834
274 Ga0307512_10006265
275 Ga0307512_10006858
276 Ga0307512_10020469
277 Ga0307513_10006803
278 Ga0307513_10046755
279 Ga0307513_10087092
280 Ga0307509_10027903
281 Ga0307509_10308845
282 Ga0307508_10143427
283 Ga0307516_10019059
284 Ga0307516_10028033
285 Ga0307516_10221068
286 Ga0307518_10014190
287 Ga0307518_10139124
288 Ga0307410_10306882
289 Ga0307409_100377816
290 Ga0307507_10013703
291 Ga0307510_10092212
292 Ga0373940_0014751
293 Ga0373923_0074471
294 Ga0373954_0191420
295 Ga0373942_0000950
296 Ga0373935_0022147
297 Ga0373937_0015129
298 Ga0436364_0045875
299 Ga0436364_0053785
300 Ga0436364_0140372
301 Ga0436364_0273664
302 Ga0436364_0462954
303 Ga0436364_0566500
304 Ga0436364_1264011
305 Ga0436364_1438770
306 Ga0436365_0468896
307 Ga0436365_0530409
308 Ga0436365_0897074
309 Ga0436363_0275177
310 Ga0436363_1060343
311 Ga0436362_0998221
312 Ga0436362_1194444
313 Ga0466968_0124266
314 Ga0466959_0211459
315 Ga0466967_0002484
316 Ga0466967_0012175
317 Ga0466967_0071977
318 Ga0495592_0061694
319 Ga0495629_0000883
320 Ga0495651_0000659
321 Ga0495653_0072749
322 Ga0495662_0008399
323 Ga0495608_0167363
324 Ga0495628_0016964
325 Ga0495630_0169873
326 Ga0495640_0064694
327 Ga0495587_0147281
328 Ga0495667_0026651
329 Ga0495634_0044514
330 Ga0495634_0070895
331 Ga0495635_0001036
332 Ga0495657_0001056
333 Ga0495657_0059005
334 Ga0495599_0063388
335 Ga0495646_0009243
336 Ga0495646_0029762
337 Ga0495613_0112625
338 Ga0495600_0000124
339 Ga0495600_0072171
340 Ga0495581_0037820
341 Ga0495604_0056093
342 Ga0495674_0012557
343 Ga0495674_0284139
344 Ga0495680_0042064
345 Ga0495683_0008510
346 Ga0495675_0063825
347 Ga0495675_0168149
348 Ga0495684_0047610
349 Ga0495593_0064602
350 Ga0495614_0000414
351 Ga0496101_0296543
352 Ga0496104_0012809
353 Ga0496104_0064300
354 Ga0496105_0094424
355 Ga0496105_0455489
356 Ga0496108_0000085
357 Ga0496109_0067865
358 Ga0496110_0019173
359 Ga0496112_0138888
360 Ga0496113_0031338
361 Ga0496114_0317594
362 Ga0496115_0184458
363 Ga0501032_0168595
364 Ga0501032_0252055
365 Ga0501033_0001271
366 Ga0501033_0267852
367 Ga0501034_0004641
368 Ga0501036_0000661
369 Ga0501037_0079034
370 Ga0501038_0014786
371 Ga0501039_0234955
372 Ga0501040_0012518
373 Ga0501040_0300276
374 Ga0501042_0001516
375 Ga0501042_0105092
376 Ga0501043_0005472
377 Ga0501046_0000188
378 Ga0501046_0145124
379 Ga0501046_0349521
380 Ga0501047_0036565
381 Ga0501048_0015559
382 Ga0501071_0018657
383 Ga0501072_0156099
384 Ga0501074_0012681
385 Ga0501074_0013322
386 Ga0501076_0135479
387 Ga0501081_0040831
388 Ga0501044_0013543
389 Ga0501044_0460367
390 Ga0501045_0033338
391 nmdc:mga0rr50_502054_c1
392 Ga0495595_0003841
393 Ga0500578_0249846
394 Ga0500640_004499
395 Ga0500641_0027922
396 Ga0500594_0024815
397 Ga0500588_0002893
398 Ga0500600_0146649
399 Ga0501084_0051093
400 Ga0501084_0121419
401 2558912109
402 2738695283
403 2739326357
404 2867317614
405 2867325682
406 2895437656
407 2899376213
408 2990094466

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19799

DUF6282

Family of unknown function (DUF6282)

46

257

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2y1h-assembly1.cif.gz_A crystal structure of the human tatd-domain protein 3 (tatdn3) 0.6672 16 304
1xrt-assembly2.cif.gz_B the crystal structure of a novel, latent dihydroorotase from aquifex aeolicus at 1.7 a resolution 0.6666 15 313
2y1h-assembly1.cif.gz_A crystal structure of the human tatd-domain protein 3 (tatdn3) 0.6479 16 304
7smj-assembly1.cif.gz_A f2n structure, protein design with deep learning 0.6381 19 260
6rue-assembly1.cif.gz_D wolinella succinogenes l-asparaginase mutant v23q,k24t with l-asp 0.6339 79 178
ID Description Score Start End Superfamily
af_P37689_82_304_3.40.1450.10 Alpha Beta;3-Layer(aba) Sandwich;2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain;BPG-independent phosphoglycerate mutase, domain B 0.7123 161 227 3.40.1450.10
af_Q9F1K0_1_146_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6733 20 77 3.20.20.140
2vunD02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6509 17 302 3.20.20.140
af_Q58977_2_248_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6445 15 306 3.20.20.140
2vunD02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6444 17 302 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A0M8Y1N8-F1-model_v4 Cytosolic protein 0.9926 4 312
AF-A0A4R4RN13-F1-model_v4 Cytosolic protein 0.9754 1 315
AF-A0A4R4RN13-F1-model_v4 Cytosolic protein 0.9724 1 315
AF-A0A430S770-F1-model_v4 Cytosolic protein 0.9642 5 304
AF-A0A101ED33-F1-model_v4 Uncharacterized protein 0.9553 150 227

Map