F312555

General Info

Members Datasets Scaffolds Average Seq Length
204 143 408 246

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10054681|Ga0157375_100546814
Length 262
Sequence LYEDGVLIGEEVTPMSIVHSLRGAAVFALGAVMLPTTTALAATRDSLDSPRPVRVSAEDVEASNKKVALAYNALTEMWSKAFYYIGDQFAAPHIVRYNRGARTACGMIGPNNAMYCPTNNTVYYDQVFVAAVQKITGDATGTDGDMAGVGIIAHEVGHAVAMQLGHASRDSYKNESVADCLTGAFANQAKKDGSLEKGDVEEAEHAMAMVGDPAPESTGDARYDRFVQRQLERNSHGTKEQRMQNFRTGLDGGAGACLIEFR

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
121 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
122 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
128 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
129 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
130 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
131 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
132 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
133 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
134 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
135 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
136 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
137 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.53
Stem 0
Stem Tuber 0
Unclassified 25.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10054681 3300013308 Bacteria 3932
2 Ga0065712_10132593 3300005290 Bacteria 1532
3 Ga0070658_10265379 3300005327 Unclassified 1459
4 Ga0070658_10440756 3300005327 Bacteria 1122
5 Ga0070683_100081214 3300005329 Bacteria 3035
6 Ga0070690_100006605 3300005330 Bacteria 6591
7 Ga0070670_100040821 3300005331 Unclassified 3988
8 Ga0068869_100075374 3300005334 Bacteria 2506
9 Ga0070680_100006855 3300005336 Bacteria 8686
10 Ga0070682_100008390 3300005337 Bacteria 5826
11 Ga0070660_100035133 3300005339 Bacteria 3793
12 Ga0070660_100081352 3300005339 Bacteria 2543
13 Ga0070661_100011077 3300005344 Bacteria 6279
14 Ga0070692_10010379 3300005345 Unclassified 4234
15 Ga0070675_100215010 3300005354 Unclassified 1673
16 Ga0070671_100319682 3300005355 Bacteria 1322
17 Ga0070671_100371514 3300005355 Bacteria 1221
18 Ga0070673_100100877 3300005364 Bacteria 2377
19 Ga0070659_100008880 3300005366 Bacteria 7365
20 Ga0070667_100463173 3300005367 Bacteria 1159
21 Ga0070709_10114914 3300005434 Bacteria 1814
22 Ga0070709_10483228 3300005434 Unclassified 938
23 Ga0070714_100011423 3300005435 Bacteria 7043
24 Ga0070714_100293722 3300005435 Unclassified 1513
25 Ga0070714_100424671 3300005435 Bacteria 1260
26 Ga0070713_100000015 3300005436 Bacteria 121525
27 Ga0070713_100496017 3300005436 Bacteria 1152
28 Ga0070710_10065644 3300005437 Bacteria 2079
29 Ga0070701_10139265 3300005438 Bacteria 1386
30 Ga0070711_100348578 3300005439 Unclassified 1190
31 Ga0070662_100101969 3300005457 Unclassified 2173
32 Ga0070681_10007422 3300005458 Bacteria 10721
33 Ga0070681_10109567 3300005458 Bacteria 2701
34 Ga0070681_10169429 3300005458 Bacteria 2106
35 Ga0070679_100000341 3300005530 Bacteria 39607
36 Ga0070679_100012013 3300005530 Bacteria 8264
37 Ga0070679_100101160 3300005530 Bacteria 2869
38 Ga0070684_100039017 3300005535 Bacteria 4084
39 Ga0070684_100515150 3300005535 Bacteria 1108
40 Ga0068853_100226963 3300005539 Unclassified 1707
41 Ga0070695_100486734 3300005545 Unclassified 952
42 Ga0070696_100646388 3300005546 Bacteria 857
43 Ga0070693_100358005 3300005547 Bacteria 1001
44 Ga0068854_100248503 3300005578 Bacteria 1419
45 Ga0068856_100022046 3300005614 Bacteria 6194
46 Ga0070702_100082121 3300005615 Bacteria 1933
47 Ga0070702_100358369 3300005615 Unclassified 1030
48 Ga0068852_100123200 3300005616 Bacteria 2377
49 Ga0068852_100537443 3300005616 Bacteria 1168
50 Ga0068859_100034377 3300005617 Bacteria 5087
51 Ga0068864_100003821 3300005618 Bacteria 12415
52 Ga0068864_100508259 3300005618 Bacteria 1160
53 Ga0068870_10261706 3300005840 Bacteria 1077
54 Ga0068863_100017664 3300005841 Bacteria 6831
55 Ga0068858_100097815 3300005842 Bacteria 2736
56 Ga0068860_100845946 3300005843 Unclassified 929
57 Ga0081455_10265393 3300005937 Bacteria 1248
58 Ga0070717_10017937 3300006028 Bacteria 5519
59 Ga0070716_100282357 3300006173 Unclassified 1146
60 Ga0097621_100168326 3300006237 Unclassified 1887
61 Ga0068871_100020596 3300006358 Bacteria 5055
62 Ga0075430_100001760 3300006846 Bacteria 17689
63 Ga0075430_100029511 3300006846 Bacteria 4656
64 Ga0075430_100104747 3300006846 Bacteria 2361
65 Ga0075431_100029191 3300006847 Bacteria 5674
66 Ga0075431_100069798 3300006847 Bacteria 3625
67 Ga0097620_100034377 3300006931 Bacteria 5087
68 Ga0105245_10056955 3300009098 Bacteria 3514
69 Ga0105245_10893875 3300009098 Bacteria 930
70 Ga0105241_10044801 3300009174 Bacteria 3353
71 Ga0105248_10371910 3300009177 Bacteria 1609
72 Ga0105248_10570003 3300009177 Unclassified 1277
73 Ga0105238_10541362 3300009551 Unclassified 1168
74 Ga0105239_10020431 3300010375 Bacteria 7306
75 Ga0105246_10102932 3300011119 Bacteria 2083
76 Ga0157371_10005621 3300013102 Bacteria 10531
77 Ga0157371_10017609 3300013102 Bacteria 5302
78 Ga0157369_10302099 3300013105 Bacteria 1665
79 Ga0157369_10324412 3300013105 Bacteria 1600
80 Ga0157374_10016605 3300013296 Bacteria 6475
81 Ga0157374_10237684 3300013296 Bacteria 1791
82 Ga0157372_10023760 3300013307 Bacteria 6649
83 Ga0157372_10041286 3300013307 Bacteria 5100
84 Ga0157372_10059360 3300013307 Bacteria 4278
85 Ga0157372_10121252 3300013307 Bacteria 3003
86 Ga0157372_10138983 3300013307 Unclassified 2798
87 Ga0157372_10456447 3300013307 Bacteria 1489
88 Ga0157372_10937170 3300013307 Unclassified 1004
89 Ga0157375_10387992 3300013308 Unclassified 1563
90 Ga0163163_10187770 3300014325 Bacteria 2115
91 Ga0157377_10074431 3300014745 Bacteria 1970
92 Ga0157376_10083896 3300014969 Bacteria 2742
93 Ga0213876_10003660 3300021384 Bacteria 8738
94 Ga0207680_10425523 3300025903 Unclassified 941
95 Ga0207647_10154803 3300025904 Bacteria 1339
96 Ga0207699_10036533 3300025906 Unclassified 2801
97 Ga0207699_10536455 3300025906 Unclassified 847
98 Ga0207705_10112170 3300025909 Bacteria 2015
99 Ga0207705_10310529 3300025909 Bacteria 1210
100 Ga0207705_10326248 3300025909 Bacteria 1180
101 Ga0207705_10352137 3300025909 Bacteria 1134
102 Ga0207654_10038985 3300025911 Bacteria 2669
103 Ga0207707_10130111 3300025912 Bacteria 2202
104 Ga0207707_10342795 3300025912 Bacteria 1288
105 Ga0207695_10148282 3300025913 Bacteria 2287
106 Ga0207693_10036305 3300025915 Bacteria 3885
107 Ga0207663_10286850 3300025916 Unclassified 1225
108 Ga0207660_10007286 3300025917 Bacteria 7160
109 Ga0207657_10056653 3300025919 Bacteria 3381
110 Ga0207657_10095905 3300025919 Bacteria 2468
111 Ga0207649_10059251 3300025920 Bacteria 2401
112 Ga0207652_10003915 3300025921 Bacteria 12172
113 Ga0207652_10028243 3300025921 Bacteria 4680
114 Ga0207650_10325706 3300025925 Bacteria 1259
115 Ga0207659_10114055 3300025926 Bacteria 2059
116 Ga0207687_10141754 3300025927 Unclassified 1824
117 Ga0207700_10076355 3300025928 Bacteria 2599
118 Ga0207664_10070237 3300025929 Bacteria 2818
119 Ga0207664_10129583 3300025929 Bacteria 2122
120 Ga0207690_10248070 3300025932 Unclassified 1374
121 Ga0207704_10291239 3300025938 Bacteria 1246
122 Ga0207711_10132034 3300025941 Bacteria 2240
123 Ga0207711_10620198 3300025941 Unclassified 1009
124 Ga0207689_10004689 3300025942 Bacteria 12335
125 Ga0207661_10099258 3300025944 Bacteria 2441
126 Ga0207661_10516149 3300025944 Unclassified 1093
127 Ga0207679_10037179 3300025945 Unclassified 3459
128 Ga0207658_10353823 3300025986 Bacteria 1280
129 Ga0207703_10507871 3300026035 Unclassified 1132
130 Ga0207639_10199113 3300026041 Unclassified 1716
131 Ga0207702_10475417 3300026078 Bacteria 1215
132 Ga0207702_10620600 3300026078 Bacteria 1062
133 Ga0207641_10016269 3300026088 Bacteria 6092
134 Ga0207676_10299552 3300026095 Unclassified 1467
135 Ga0207674_10001901 3300026116 Bacteria 26573
136 Ga0207698_10221213 3300026142 Bacteria 1711
137 Ga0207698_10461928 3300026142 Bacteria 1228
138 Ga0209998_10003005 3300027717 Bacteria 3754
139 Ga0268264_10022532 3300028381 Bacteria 5141
140 Ga0307408_100106467 3300031548 Unclassified 2146
141 Ga0307405_10330233 3300031731 Bacteria 1168
142 Ga0307405_10578899 3300031731 Bacteria 913
143 Ga0307413_10113309 3300031824 Unclassified 1820
144 Ga0307413_10190551 3300031824 Bacteria 1472
145 Ga0307410_10113471 3300031852 Bacteria 1964
146 Ga0307406_10206469 3300031901 Bacteria 1450
147 Ga0307407_10102645 3300031903 Bacteria 1778
148 Ga0307407_10134628 3300031903 Bacteria 1586
149 Ga0307407_10529150 3300031903 Bacteria 868
150 Ga0307412_10090788 3300031911 Unclassified 2136
151 Ga0307412_10200279 3300031911 Unclassified 1516
152 Ga0307409_100034780 3300031995 Bacteria 3685
153 Ga0307409_100231561 3300031995 Bacteria 1675
154 Ga0307409_100266063 3300031995 Bacteria 1576
155 Ga0307409_100347909 3300031995 Unclassified 1397
156 Ga0307416_100078578 3300032002 Unclassified 2777
157 Ga0307416_100254967 3300032002 Bacteria 1710
158 Ga0307416_100774819 3300032002 Bacteria 1053
159 Ga0307414_10111728 3300032004 Bacteria 2082
160 Ga0307414_10116838 3300032004 Unclassified 2043
161 Ga0307414_10536344 3300032004 Bacteria 1041
162 Ga0307414_10765443 3300032004 Bacteria 878
163 Ga0307415_100162123 3300032126 Bacteria 1734
164 Ga0395899_0093598 3300037312 Bacteria 2175
165 Ga0395898_0169012 3300037466 Bacteria 2090
166 Ga0395905_0020268 3300037471 Bacteria 6300
167 Ga0436364_0503076 3300037853 Bacteria 912
168 Ga0395901_0010639 3300038443 Bacteria 9322
169 Ga0395901_1024613 3300038443 Unclassified 800
170 Ga0436365_1369701 3300039437 Bacteria 14298
171 Ga0466963_0093433 3300044694 Bacteria 2051
172 Ga0466959_0052619 3300045049 Unclassified 2981
173 Ga0451576_0715783 3300045051 Bacteria 1052
174 Ga0466958_0056013 3300045836 Bacteria 2394
175 Ga0466967_0138423 3300045976 Unclassified 2266
176 Ga0466967_0185392 3300045976 Bacteria 1965
177 Ga0466967_0664303 3300045976 Unclassified 1031
178 Ga0495598_0115287 3300046537 Bacteria 905
179 Ga0495588_0138095 3300046674 Unclassified 1287
180 Ga0495672_0005729 3300047320 Bacteria 9783
181 Ga0501033_0455342 3300049570 Unclassified 888
182 Ga0501036_0039272 3300049572 Bacteria 4006
183 Ga0501038_0054220 3300049574 Bacteria 3449
184 Ga0501067_0160021 3300049583 Bacteria 1254
185 Ga0501208_011048 3300049655 Unclassified 1293
186 Ga0501217_006616 3300049661 Unclassified 2469
187 Ga0501227_049618 3300049665 Unclassified 1056
188 Ga0501233_046028 3300049668 Bacteria 1042
189 Ga0501235_003722 3300049669 Unclassified 3293
190 Ga0501249_037555 3300049679 Unclassified 1093
191 Ga0501221_010791 3300049704 Bacteria 1630
192 Ga0501225_0003477 3300049705 Unclassified 4758
193 Ga0501225_0031411 3300049705 Bacteria 1461
194 Ga0501234_001655 3300049707 Unclassified 3493
195 Ga0501265_007155 3300049762 Bacteria 1309
196 Ga0501268_000870 3300049765 Unclassified 3523
197 Ga0501035_0038257 3300049822 Bacteria 4344
198 nmdc:mga09592_320585_c1 3300050508 Bacteria 1342
199 nmdc:mga0qj67_364976_c1 3300050509 Bacteria 1167
200 nmdc:mga0qj67_45436_c1 3300050509 Bacteria 3466
201 nmdc:mga06r32_118278_c1 3300050510 Bacteria 2612
202 nmdc:mga06r32_31887_c1 3300050510 Bacteria 4953
203 nmdc:mga0rr50_211930_c1 3300050513 Unclassified 1596
204 Ga0590071_020906 3300059421 Bacteria 1542
205 Ga0157375_10054681
206 Ga0065712_10132593
207 Ga0070658_10265379
208 Ga0070658_10440756
209 Ga0070683_100081214
210 Ga0070690_100006605
211 Ga0070670_100040821
212 Ga0068869_100075374
213 Ga0070680_100006855
214 Ga0070682_100008390
215 Ga0070660_100035133
216 Ga0070660_100081352
217 Ga0070661_100011077
218 Ga0070692_10010379
219 Ga0070675_100215010
220 Ga0070671_100319682
221 Ga0070671_100371514
222 Ga0070673_100100877
223 Ga0070659_100008880
224 Ga0070667_100463173
225 Ga0070709_10114914
226 Ga0070709_10483228
227 Ga0070714_100011423
228 Ga0070714_100293722
229 Ga0070714_100424671
230 Ga0070713_100000015
231 Ga0070713_100496017
232 Ga0070710_10065644
233 Ga0070701_10139265
234 Ga0070711_100348578
235 Ga0070662_100101969
236 Ga0070681_10007422
237 Ga0070681_10109567
238 Ga0070681_10169429
239 Ga0070679_100000341
240 Ga0070679_100012013
241 Ga0070679_100101160
242 Ga0070684_100039017
243 Ga0070684_100515150
244 Ga0068853_100226963
245 Ga0070695_100486734
246 Ga0070696_100646388
247 Ga0070693_100358005
248 Ga0068854_100248503
249 Ga0068856_100022046
250 Ga0070702_100082121
251 Ga0070702_100358369
252 Ga0068852_100123200
253 Ga0068852_100537443
254 Ga0068859_100034377
255 Ga0068864_100003821
256 Ga0068864_100508259
257 Ga0068870_10261706
258 Ga0068863_100017664
259 Ga0068858_100097815
260 Ga0068860_100845946
261 Ga0081455_10265393
262 Ga0070717_10017937
263 Ga0070716_100282357
264 Ga0097621_100168326
265 Ga0068871_100020596
266 Ga0075430_100001760
267 Ga0075430_100029511
268 Ga0075430_100104747
269 Ga0075431_100029191
270 Ga0075431_100069798
271 Ga0097620_100034377
272 Ga0105245_10056955
273 Ga0105245_10893875
274 Ga0105241_10044801
275 Ga0105248_10371910
276 Ga0105248_10570003
277 Ga0105238_10541362
278 Ga0105239_10020431
279 Ga0105246_10102932
280 Ga0157371_10005621
281 Ga0157371_10017609
282 Ga0157369_10302099
283 Ga0157369_10324412
284 Ga0157374_10016605
285 Ga0157374_10237684
286 Ga0157372_10023760
287 Ga0157372_10041286
288 Ga0157372_10059360
289 Ga0157372_10121252
290 Ga0157372_10138983
291 Ga0157372_10456447
292 Ga0157372_10937170
293 Ga0157375_10387992
294 Ga0163163_10187770
295 Ga0157377_10074431
296 Ga0157376_10083896
297 Ga0213876_10003660
298 Ga0207680_10425523
299 Ga0207647_10154803
300 Ga0207699_10036533
301 Ga0207699_10536455
302 Ga0207705_10112170
303 Ga0207705_10310529
304 Ga0207705_10326248
305 Ga0207705_10352137
306 Ga0207654_10038985
307 Ga0207707_10130111
308 Ga0207707_10342795
309 Ga0207695_10148282
310 Ga0207693_10036305
311 Ga0207663_10286850
312 Ga0207660_10007286
313 Ga0207657_10056653
314 Ga0207657_10095905
315 Ga0207649_10059251
316 Ga0207652_10003915
317 Ga0207652_10028243
318 Ga0207650_10325706
319 Ga0207659_10114055
320 Ga0207687_10141754
321 Ga0207700_10076355
322 Ga0207664_10070237
323 Ga0207664_10129583
324 Ga0207690_10248070
325 Ga0207704_10291239
326 Ga0207711_10132034
327 Ga0207711_10620198
328 Ga0207689_10004689
329 Ga0207661_10099258
330 Ga0207661_10516149
331 Ga0207679_10037179
332 Ga0207658_10353823
333 Ga0207703_10507871
334 Ga0207639_10199113
335 Ga0207702_10475417
336 Ga0207702_10620600
337 Ga0207641_10016269
338 Ga0207676_10299552
339 Ga0207674_10001901
340 Ga0207698_10221213
341 Ga0207698_10461928
342 Ga0209998_10003005
343 Ga0268264_10022532
344 Ga0307408_100106467
345 Ga0307405_10330233
346 Ga0307405_10578899
347 Ga0307413_10113309
348 Ga0307413_10190551
349 Ga0307410_10113471
350 Ga0307406_10206469
351 Ga0307407_10102645
352 Ga0307407_10134628
353 Ga0307407_10529150
354 Ga0307412_10090788
355 Ga0307412_10200279
356 Ga0307409_100034780
357 Ga0307409_100231561
358 Ga0307409_100266063
359 Ga0307409_100347909
360 Ga0307416_100078578
361 Ga0307416_100254967
362 Ga0307416_100774819
363 Ga0307414_10111728
364 Ga0307414_10116838
365 Ga0307414_10536344
366 Ga0307414_10765443
367 Ga0307415_100162123
368 Ga0395899_0093598
369 Ga0395898_0169012
370 Ga0395905_0020268
371 Ga0436364_0503076
372 Ga0395901_0010639
373 Ga0395901_1024613
374 Ga0436365_1369701
375 Ga0466963_0093433
376 Ga0466959_0052619
377 Ga0451576_0715783
378 Ga0466958_0056013
379 Ga0466967_0138423
380 Ga0466967_0185392
381 Ga0466967_0664303
382 Ga0495598_0115287
383 Ga0495588_0138095
384 Ga0495672_0005729
385 Ga0501033_0455342
386 Ga0501036_0039272
387 Ga0501038_0054220
388 Ga0501067_0160021
389 Ga0501208_011048
390 Ga0501217_006616
391 Ga0501227_049618
392 Ga0501233_046028
393 Ga0501235_003722
394 Ga0501249_037555
395 Ga0501221_010791
396 Ga0501225_0003477
397 Ga0501225_0031411
398 Ga0501234_001655
399 Ga0501265_007155
400 Ga0501268_000870
401 Ga0501035_0038257
402 nmdc:mga09592_320585_c1
403 nmdc:mga0qj67_364976_c1
404 nmdc:mga0qj67_45436_c1
405 nmdc:mga06r32_118278_c1
406 nmdc:mga06r32_31887_c1
407 nmdc:mga0rr50_211930_c1
408 Ga0590071_020906

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04228

Zn_peptidase

Putative neutral zinc metallopeptidase

16

258

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6eom-assembly1.cif.gz_A structure of dpp iii from caldithrix abyssi 0.5264 59 192
1aq6-assembly1.cif.gz_B structure of l-2-haloacid dehalogenase from xanthobacter autotrophicus 0.4084 115 237
5tpr-assembly1.cif.gz_B desmethyl-4-deoxygadusol synthase from anabaena variabilis (ava_3858) with nad+ and zn2+ bound 0.3603 112 233
3izk-assembly1.cif.gz_A mm-cpn rls deltalid with atp 0.3461 48 173
3nqx-assembly1.cif.gz_A crystal structure of vibriolysin mcp-02 mature enzyme, a zinc metalloprotease from m4 family 0.3253 45 247
ID Description Score Start End Superfamily
af_P64429_1_283_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.7874 41 243 3.40.390.10
af_P9WL85_4_287_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.6997 47 240 3.40.390.10
af_P64429_1_283_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.64 41 243 3.40.390.10
af_P9WL85_4_287_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.5505 47 240 3.40.390.10
af_Q55CA5_72_237_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.4721 48 222 3.40.390.10
ID Description Score Start End GO Terms
AF-A0A838RAM0-F1-model_v4 Neutral zinc metallopeptidase 0.9367 50 244 GO:0016020
AF-A0A4R4WC55-F1-model_v4 Metalloprotease 0.9016 50 243 GO:0016020
AF-A0A4R4N634-F1-model_v4 Metalloprotease 0.9001 50 243 GO:0016020
AF-A0A4R5FHU4-F1-model_v4 Metalloprotease 0.8985 50 243 GO:0016020
AF-A0A6J4VJF2-F1-model_v4 YpfJ protein, zinc metalloprotease superfamily 0.8968 56 246 GO:0016020

Map