F312438

General Info

Members Datasets Scaffolds Average Seq Length
204 158 408 466

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10030112|Ga0111539_100301126
Length 508
Sequence MTVVSASPSAANPAAADRSRWAALALVCIAQLMIVLDVAIVNVALPSIQDDLGFSQGQLTWVVNAFLVTFGSLLLLTGRIGDLVGRRRVFLGGLVVFTVASVLCGVAPSGGALIAARALQGVGAAAQASVILAIIVTEFPETAERARAMSAYVFVSVAGGSLGLLAGGLLTQALSWHWIFFVNLPIGMATFVLGRMLIRADRGLGLSHGIDWLGSALVTASLASAIYAIVEATNHGWVSRPVLGMGLVAAVLMAAFIALEARIQNPIMPLRILRVRGLVDASLVRAVLVMGMYSTFFLGALYLEHVRRYSALETGAAFLPWTLTVAVLSQGITARLVARFGPLPVLTAGMGGAVAGLLLFATIGPGTAFFPTIFVACFVIGLGVGIAFMPLMTLAMANVPPEDAGLGSGITNLAHQIGGAIGLALLGTLAANHTQALLAADHGRTDALVGGYQFAFVIGAAIIGAGTVLAYALLRPRAPRPELRLASVPAADGAAHPTTTFDTEDQAA

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
97 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
98 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
99 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
100 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
101 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
102 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
153 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.45
Nodule 0
Rhizoplane 6.86
Rhizosphere 83.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10030112 3300009094 Bacteria 6601
2 Ga0070658_10042852 3300005327 Bacteria 3656
3 Ga0070683_100001645 3300005329 Bacteria 17312
4 Ga0070683_100008455 3300005329 Bacteria 8744
5 Ga0070683_100038126 3300005329 Bacteria 4402
6 Ga0070680_100003069 3300005336 Bacteria 12391
7 Ga0070682_100094474 3300005337 Bacteria 1962
8 Ga0068868_100015873 3300005338 Bacteria 5580
9 Ga0070661_100011513 3300005344 Bacteria 6161
10 Ga0070668_100031940 3300005347 Bacteria 4007
11 Ga0070675_100013141 3300005354 Bacteria 6506
12 Ga0070674_100000423 3300005356 Bacteria 21337
13 Ga0070659_100013949 3300005366 Bacteria 5997
14 Ga0070659_100035904 3300005366 Bacteria 3862
15 Ga0070703_10014966 3300005406 Bacteria 2215
16 Ga0070714_100056366 3300005435 Bacteria 3361
17 Ga0070710_10023088 3300005437 Bacteria 3263
18 Ga0070711_100037031 3300005439 Bacteria 3272
19 Ga0070663_100002644 3300005455 Bacteria 10138
20 Ga0070663_100102897 3300005455 Bacteria 2134
21 Ga0070662_100018225 3300005457 Bacteria 4746
22 Ga0070698_100242980 3300005471 Bacteria 1733
23 Ga0070679_100009281 3300005530 Bacteria 9299
24 Ga0070684_100005809 3300005535 Bacteria 9491
25 Ga0070684_100041193 3300005535 Bacteria 3981
26 Ga0070684_100095969 3300005535 Bacteria 2642
27 Ga0070665_100049306 3300005548 Bacteria 4225
28 Ga0070664_100088808 3300005564 Bacteria 2673
29 Ga0068856_100012458 3300005614 Bacteria 8232
30 Ga0070702_100083820 3300005615 Bacteria 1916
31 Ga0068852_100003282 3300005616 Bacteria 11293
32 Ga0068864_100002162 3300005618 Bacteria 16232
33 Ga0068861_100006367 3300005719 Bacteria 8039
34 Ga0081538_10001019 3300005981 Bacteria 29895
35 Ga0081538_10009410 3300005981 Bacteria 8163
36 Ga0081538_10011686 3300005981 Bacteria 7096
37 Ga0081539_10001782 3300005985 Bacteria 34184
38 Ga0075365_10007212 3300006038 Bacteria 6209
39 Ga0075368_10028708 3300006042 Bacteria 2150
40 Ga0070712_100066829 3300006175 Bacteria 2557
41 Ga0075434_100064479 3300006871 Bacteria 3647
42 Ga0099794_10000150 3300007265 Bacteria 25690
43 Ga0105240_10017453 3300009093 Bacteria 9672
44 Ga0111539_10035509 3300009094 Bacteria 6034
45 Ga0105245_10003357 3300009098 Bacteria 14354
46 Ga0105245_10005872 3300009098 Bacteria 10783
47 Ga0105237_10044794 3300009545 Bacteria 4454
48 Ga0105238_10024074 3300009551 Bacteria 6208
49 Ga0105249_10040156 3300009553 Bacteria 4249
50 Ga0105239_10008901 3300010375 Bacteria 11361
51 Ga0105239_10218474 3300010375 Bacteria 2137
52 Ga0157370_10056341 3300013104 Bacteria 3741
53 Ga0157369_10158858 3300013105 Bacteria 2387
54 Ga0157374_10037768 3300013296 Bacteria 4435
55 Ga0163162_10088973 3300013306 Bacteria 3168
56 Ga0157372_10032969 3300013307 Bacteria 5686
57 Ga0163163_10014778 3300014325 Bacteria 7185
58 Ga0157377_10000530 3300014745 Bacteria 16191
59 Ga0213875_10000080 3300021388 Bacteria 114342
60 Ga0213875_10051992 3300021388 Bacteria 1919
61 Ga0207692_10006228 3300025898 Bacteria 4833
62 Ga0207692_10009573 3300025898 Bacteria 4053
63 Ga0207688_10006476 3300025901 Bacteria 6373
64 Ga0207707_10008910 3300025912 Bacteria 8713
65 Ga0207693_10013408 3300025915 Bacteria 6608
66 Ga0207693_10021671 3300025915 Bacteria 5108
67 Ga0207652_10032365 3300025921 Bacteria 4395
68 Ga0207646_10099224 3300025922 Bacteria 2610
69 Ga0207659_10109295 3300025926 Bacteria 2099
70 Ga0207687_10043127 3300025927 Bacteria 3107
71 Ga0207664_10048030 3300025929 Bacteria 3355
72 Ga0207706_10015157 3300025933 Bacteria 6976
73 Ga0207706_10180342 3300025933 Bacteria 1855
74 Ga0207709_10088144 3300025935 Bacteria 2019
75 Ga0207669_10033808 3300025937 Bacteria 2890
76 Ga0207691_10126211 3300025940 Bacteria 2264
77 Ga0207661_10008000 3300025944 Bacteria 7539
78 Ga0207712_10014661 3300025961 Bacteria 5047
79 Ga0207678_10004636 3300026067 Bacteria 12349
80 Ga0207708_10000328 3300026075 Bacteria 37335
81 Ga0207702_10079364 3300026078 Bacteria 2845
82 Ga0207648_10123159 3300026089 Bacteria 2280
83 Ga0207676_10014004 3300026095 Bacteria 5758
84 Ga0207674_10198853 3300026116 Bacteria 1954
85 Ga0207675_100017998 3300026118 Bacteria 6591
86 Ga0207675_100029658 3300026118 Bacteria 5094
87 Ga0207683_10017550 3300026121 Bacteria 6101
88 Ga0207698_10026886 3300026142 Bacteria 4076
89 Ga0209588_1000072 3300027671 Bacteria 34358
90 Ga0268266_10188875 3300028379 Bacteria 1880
91 Ga0265336_10030486 3300028666 Bacteria 1679
92 Ga0265338_10044091 3300028800 Bacteria 4124
93 Ga0307405_10040247 3300031731 Bacteria 2830
94 Ga0307413_10040006 3300031824 Bacteria 2732
95 Ga0307410_10047749 3300031852 Bacteria 2863
96 Ga0307406_10032372 3300031901 Bacteria 3192
97 Ga0307407_10095226 3300031903 Bacteria 1835
98 Ga0307409_100031751 3300031995 Bacteria 3817
99 Ga0307416_100001212 3300032002 Bacteria 13896
100 Ga0307416_100018552 3300032002 Bacteria 4905
101 Ga0307415_100129172 3300032126 Bacteria 1909
102 Ga0373933_0043273 3300035724 Bacteria 2664
103 Ga0373937_0025151 3300036401 Bacteria 5375
104 Ga0395899_0030849 3300037312 Bacteria 4030
105 Ga0395900_0005343 3300037418 Bacteria 13461
106 Ga0395900_0173233 3300037418 Bacteria 2196
107 Ga0395898_0002030 3300037466 Bacteria 25361
108 Ga0395898_0086387 3300037466 Bacteria 3023
109 Ga0395898_0136459 3300037466 Bacteria 2349
110 Ga0395898_0232332 3300037466 Bacteria 1759
111 Ga0395905_0004865 3300037471 Bacteria 13844
112 Ga0436364_0178957 3300037853 Bacteria 4939
113 Ga0436364_0262041 3300037853 Bacteria 1899
114 Ga0436364_0262598 3300037853 Bacteria 3395
115 Ga0436364_0301793 3300037853 Bacteria 56095
116 Ga0436364_1058842 3300037853 Bacteria 6867
117 Ga0436364_1253852 3300037853 Bacteria 2427
118 Ga0395901_0001909 3300038443 Bacteria 21480
119 Ga0436365_0280497 3300039437 Bacteria 2888
120 Ga0436365_0451556 3300039437 Bacteria 3207
121 Ga0436360_0362969 3300039438 Bacteria 1836
122 Ga0436363_0058245 3300039450 Bacteria 47090
123 Ga0436363_0673452 3300039450 Bacteria 2556
124 Ga0436363_0934777 3300039450 Bacteria 2580
125 Ga0439464_0009704 3300042439 Bacteria 2536
126 Ga0466965_0090854 3300044683 Bacteria 1553
127 Ga0466961_0040172 3300044693 Bacteria 2999
128 Ga0466961_0071303 3300044693 Bacteria 2205
129 Ga0466961_0076464 3300044693 Bacteria 2122
130 Ga0466963_0007496 3300044694 Bacteria 6510
131 Ga0466963_0045673 3300044694 Bacteria 2885
132 Ga0466963_0066755 3300044694 Bacteria 2413
133 Ga0466971_0033869 3300044719 Bacteria 2288
134 Ga0466970_0004050 3300044765 Bacteria 7195
135 Ga0466957_0000995 3300044842 Bacteria 14563
136 Ga0466959_0003438 3300045049 Bacteria 10358
137 Ga0466958_0000438 3300045836 Bacteria 17203
138 Ga0466958_0000797 3300045836 Bacteria 13889
139 Ga0466958_0013065 3300045836 Bacteria 4719
140 Ga0466958_0050794 3300045836 Bacteria 2510
141 Ga0466958_0087285 3300045836 Bacteria 1926
142 Ga0466967_0008816 3300045976 Bacteria 7433
143 Ga0466967_0011808 3300045976 Bacteria 6642
144 Ga0466967_0025177 3300045976 Bacteria 4904
145 Ga0466967_0049067 3300045976 Bacteria 3690
146 Ga0466967_0072604 3300045976 Bacteria 3085
147 Ga0495592_0056502 3300046454 Bacteria 2900
148 Ga0495629_0133882 3300046459 Bacteria 1726
149 Ga0495651_0000718 3300046462 Bacteria 25711
150 Ga0495651_0051937 3300046462 Bacteria 3159
151 Ga0495653_0018138 3300046463 Bacteria 5721
152 Ga0495608_0011597 3300046511 Bacteria 6133
153 Ga0495652_0001147 3300046529 Bacteria 29821
154 Ga0495640_0026637 3300046533 Bacteria 4175
155 Ga0495587_0015938 3300046536 Bacteria 4679
156 Ga0495645_0017698 3300046543 Bacteria 5109
157 Ga0495667_0037356 3300046559 Bacteria 3237
158 Ga0495634_0011781 3300046642 Bacteria 6358
159 Ga0495623_0016663 3300046679 Bacteria 4747
160 Ga0495600_0018295 3300046809 Bacteria 4462
161 Ga0495604_0002270 3300047317 Bacteria 15392
162 Ga0495680_0018486 3300047322 Bacteria 5914
163 Ga0495684_0018062 3300047471 Bacteria 5435
164 Ga0495593_0067429 3300047673 Bacteria 1863
165 Ga0495602_0069513 3300048088 Bacteria 3018
166 Ga0496101_0059959 3300048904 Bacteria 2759
167 Ga0496102_0019188 3300048905 Bacteria 6020
168 Ga0496104_0039139 3300048907 Bacteria 4438
169 Ga0496105_0115851 3300048908 Bacteria 2210
170 Ga0496106_0084574 3300048909 Bacteria 2441
171 Ga0496109_0009292 3300048912 Bacteria 8377
172 Ga0496110_0005854 3300048913 Bacteria 9666
173 Ga0496110_0039326 3300048913 Bacteria 4118
174 Ga0496110_0158398 3300048913 Bacteria 2052
175 Ga0496111_0015371 3300048914 Bacteria 5251
176 Ga0496112_0020977 3300048915 Bacteria 6204
177 Ga0496112_0098610 3300048915 Bacteria 2892
178 Ga0496113_0016633 3300048916 Bacteria 5084
179 Ga0496115_0102361 3300048918 Bacteria 2349
180 Ga0496121_0000832 3300048924 Bacteria 56038
181 Ga0501036_0061115 3300049572 Bacteria 3191
182 Ga0501038_0120052 3300049574 Bacteria 2169
183 Ga0501039_0005661 3300049575 Bacteria 9462
184 Ga0501042_0006752 3300049578 Bacteria 7480
185 Ga0501071_0005064 3300049587 Bacteria 8432
186 Ga0501072_0087579 3300049588 Bacteria 2471
187 Ga0501075_0160733 3300049591 Bacteria 1714
188 Ga0501076_0008311 3300049592 Bacteria 7606
189 Ga0501076_0054784 3300049592 Bacteria 3161
190 Ga0501077_0093320 3300049593 Bacteria 1908
191 Ga0501079_0037033 3300049741 Bacteria 3758
192 Ga0501080_0163935 3300049742 Bacteria 2052
193 Ga0501081_0167530 3300049743 Bacteria 1585
194 Ga0501045_0139443 3300049824 Bacteria 1803
195 nmdc:mga0yw44_106995_c1 3300050492 Bacteria 1788
196 nmdc:mga0rr50_109986_c1 3300050513 Bacteria 2179
197 nmdc:mga0a205_28466_c1 3300050515 Bacteria 5343
198 Ga0495595_0008671 3300053084 Bacteria 4183
199 Ga0495619_0017629 3300053085 Bacteria 4523
200 Ga0500556_0000400 3300053104 Bacteria 31735
201 Ga0500616_0000930 3300053153 Bacteria 32033
202 Ga0501084_0014421 3300054114 Bacteria 6550
203 Ga0501082_0027909 3300060353 Bacteria 4861
204 Ga0466962_0045154 3300061719 Bacteria 2106
205 Ga0111539_10030112
206 Ga0070658_10042852
207 Ga0070683_100001645
208 Ga0070683_100008455
209 Ga0070683_100038126
210 Ga0070680_100003069
211 Ga0070682_100094474
212 Ga0068868_100015873
213 Ga0070661_100011513
214 Ga0070668_100031940
215 Ga0070675_100013141
216 Ga0070674_100000423
217 Ga0070659_100013949
218 Ga0070659_100035904
219 Ga0070703_10014966
220 Ga0070714_100056366
221 Ga0070710_10023088
222 Ga0070711_100037031
223 Ga0070663_100002644
224 Ga0070663_100102897
225 Ga0070662_100018225
226 Ga0070698_100242980
227 Ga0070679_100009281
228 Ga0070684_100005809
229 Ga0070684_100041193
230 Ga0070684_100095969
231 Ga0070665_100049306
232 Ga0070664_100088808
233 Ga0068856_100012458
234 Ga0070702_100083820
235 Ga0068852_100003282
236 Ga0068864_100002162
237 Ga0068861_100006367
238 Ga0081538_10001019
239 Ga0081538_10009410
240 Ga0081538_10011686
241 Ga0081539_10001782
242 Ga0075365_10007212
243 Ga0075368_10028708
244 Ga0070712_100066829
245 Ga0075434_100064479
246 Ga0099794_10000150
247 Ga0105240_10017453
248 Ga0111539_10035509
249 Ga0105245_10003357
250 Ga0105245_10005872
251 Ga0105237_10044794
252 Ga0105238_10024074
253 Ga0105249_10040156
254 Ga0105239_10008901
255 Ga0105239_10218474
256 Ga0157370_10056341
257 Ga0157369_10158858
258 Ga0157374_10037768
259 Ga0163162_10088973
260 Ga0157372_10032969
261 Ga0163163_10014778
262 Ga0157377_10000530
263 Ga0213875_10000080
264 Ga0213875_10051992
265 Ga0207692_10006228
266 Ga0207692_10009573
267 Ga0207688_10006476
268 Ga0207707_10008910
269 Ga0207693_10013408
270 Ga0207693_10021671
271 Ga0207652_10032365
272 Ga0207646_10099224
273 Ga0207659_10109295
274 Ga0207687_10043127
275 Ga0207664_10048030
276 Ga0207706_10015157
277 Ga0207706_10180342
278 Ga0207709_10088144
279 Ga0207669_10033808
280 Ga0207691_10126211
281 Ga0207661_10008000
282 Ga0207712_10014661
283 Ga0207678_10004636
284 Ga0207708_10000328
285 Ga0207702_10079364
286 Ga0207648_10123159
287 Ga0207676_10014004
288 Ga0207674_10198853
289 Ga0207675_100017998
290 Ga0207675_100029658
291 Ga0207683_10017550
292 Ga0207698_10026886
293 Ga0209588_1000072
294 Ga0268266_10188875
295 Ga0265336_10030486
296 Ga0265338_10044091
297 Ga0307405_10040247
298 Ga0307413_10040006
299 Ga0307410_10047749
300 Ga0307406_10032372
301 Ga0307407_10095226
302 Ga0307409_100031751
303 Ga0307416_100001212
304 Ga0307416_100018552
305 Ga0307415_100129172
306 Ga0373933_0043273
307 Ga0373937_0025151
308 Ga0395899_0030849
309 Ga0395900_0005343
310 Ga0395900_0173233
311 Ga0395898_0002030
312 Ga0395898_0086387
313 Ga0395898_0136459
314 Ga0395898_0232332
315 Ga0395905_0004865
316 Ga0436364_0178957
317 Ga0436364_0262041
318 Ga0436364_0262598
319 Ga0436364_0301793
320 Ga0436364_1058842
321 Ga0436364_1253852
322 Ga0395901_0001909
323 Ga0436365_0280497
324 Ga0436365_0451556
325 Ga0436360_0362969
326 Ga0436363_0058245
327 Ga0436363_0673452
328 Ga0436363_0934777
329 Ga0439464_0009704
330 Ga0466965_0090854
331 Ga0466961_0040172
332 Ga0466961_0071303
333 Ga0466961_0076464
334 Ga0466963_0007496
335 Ga0466963_0045673
336 Ga0466963_0066755
337 Ga0466971_0033869
338 Ga0466970_0004050
339 Ga0466957_0000995
340 Ga0466959_0003438
341 Ga0466958_0000438
342 Ga0466958_0000797
343 Ga0466958_0013065
344 Ga0466958_0050794
345 Ga0466958_0087285
346 Ga0466967_0008816
347 Ga0466967_0011808
348 Ga0466967_0025177
349 Ga0466967_0049067
350 Ga0466967_0072604
351 Ga0495592_0056502
352 Ga0495629_0133882
353 Ga0495651_0000718
354 Ga0495651_0051937
355 Ga0495653_0018138
356 Ga0495608_0011597
357 Ga0495652_0001147
358 Ga0495640_0026637
359 Ga0495587_0015938
360 Ga0495645_0017698
361 Ga0495667_0037356
362 Ga0495634_0011781
363 Ga0495623_0016663
364 Ga0495600_0018295
365 Ga0495604_0002270
366 Ga0495680_0018486
367 Ga0495684_0018062
368 Ga0495593_0067429
369 Ga0495602_0069513
370 Ga0496101_0059959
371 Ga0496102_0019188
372 Ga0496104_0039139
373 Ga0496105_0115851
374 Ga0496106_0084574
375 Ga0496109_0009292
376 Ga0496110_0005854
377 Ga0496110_0039326
378 Ga0496110_0158398
379 Ga0496111_0015371
380 Ga0496112_0020977
381 Ga0496112_0098610
382 Ga0496113_0016633
383 Ga0496115_0102361
384 Ga0496121_0000832
385 Ga0501036_0061115
386 Ga0501038_0120052
387 Ga0501039_0005661
388 Ga0501042_0006752
389 Ga0501071_0005064
390 Ga0501072_0087579
391 Ga0501075_0160733
392 Ga0501076_0008311
393 Ga0501076_0054784
394 Ga0501077_0093320
395 Ga0501079_0037033
396 Ga0501080_0163935
397 Ga0501081_0167530
398 Ga0501045_0139443
399 nmdc:mga0yw44_106995_c1
400 nmdc:mga0rr50_109986_c1
401 nmdc:mga0a205_28466_c1
402 Ga0495595_0008671
403 Ga0495619_0017629
404 Ga0500556_0000400
405 Ga0500616_0000930
406 Ga0501084_0014421
407 Ga0501082_0027909
408 Ga0466962_0045154

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

27

423

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.57 4 454
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.5428 4 454
8pnl-assembly2.cif.gz_C outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.5316 16 445
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.5214 16 445
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.5183 19 446
ID Description Score Start End Superfamily
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.97 22 210 1.20.1250.20
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9549 22 210 1.20.1250.20
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9504 18 192 1.20.1250.20
af_Q03263_69_259_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9494 18 196 1.20.1250.20
af_P9WG85_29_254_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9491 21 246 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A372JM89-F1-model_v4 MFS transporter 0.9931 22 125 GO:0016020
GO:0022857
AF-A0A379LT24-F1-model_v4 Probable metabolite transport protein CsbC 0.9431 16 197 GO:0005886
GO:0022857
AF-A0A2J4PSZ1-F1-model_v4 Bcr/CflA family drug resistance efflux transporter 0.9419 20 152 GO:0005886
GO:0022857
AF-A0A7Z7R0J1-F1-model_v4 Chloramphenicol resistance protein 0.9298 19 198 GO:0005886
GO:0022857
AF-A0A132T9A8-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9295 19 193 GO:0016020
GO:0022857

Map