F312232

General Info

Members Datasets Scaffolds Average Seq Length
204 125 408 329

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100085474|Ga0070698_1000854744
Length 397
Sequence MDLDLVFLGTSASMPTALRAPAAFLVRRGGERLLFDCAEGTQRQLQRSSVGLPDLEEIFLTHLHADHVLGLPGMLKTFALRGRDEVGLTVYGPKGVRDLFGKLKPFLGRLPYPLTIVELAPKDTLERGEYVIETFPVDHGVSALGYALVEHERPGRFDVAAADALGVPAGRERGILQAGDAVTLADGSVVTSDEVLGPARPGRKLVITGDTAPAPSVVQAAHGADLLVHEATFAEEEKERARETLHATATEAAEVARLAEVRLLALTHVSTRYFGAELARQARAIFPETVVPRDFDVVDVPFPERGAPQLLKGAGRPPRKLAYDPGVMSRMVQIATAGDVTEAEELQELLRNAGIDAELEAADSADGLMVMVPETTLEAAQDAIEALSEPDDLIAEP

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
55 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
62 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
63 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
64 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
65 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
66 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
67 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
68 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
69 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
70 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
71 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
79 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
82 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
89 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
95 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
121 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
122 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
123 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
124 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.29
Rhizosphere 89.71
Stem 0
Stem Tuber 0
Unclassified 7.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100085474 3300005471 Bacteria 3142
2 Ga0070658_10009482 3300005327 Archaea 7822
3 Ga0070683_100056747 3300005329 Bacteria 3637
4 Ga0070680_100054526 3300005336 Bacteria 3265
5 Ga0070660_100030204 3300005339 Bacteria 4064
6 Ga0070660_100120572 3300005339 Bacteria 2093
7 Ga0070714_100106903 3300005435 Bacteria 2472
8 Ga0070714_100111114 3300005435 Unclassified 2427
9 Ga0070711_100070548 3300005439 Unclassified 2460
10 Ga0070711_100138949 3300005439 Bacteria 1819
11 Ga0070711_100302635 3300005439 Unclassified 1272
12 Ga0070700_100063798 3300005441 Bacteria 2331
13 Ga0070681_10019235 3300005458 Bacteria 6833
14 Ga0070681_10049353 3300005458 Bacteria 4203
15 Ga0070707_100060437 3300005468 Bacteria 3634
16 Ga0070698_100103894 3300005471 Bacteria 2811
17 Ga0070699_100074268 3300005518 Bacteria 2958
18 Ga0070679_100037063 3300005530 Bacteria 4841
19 Ga0070679_100064501 3300005530 Bacteria 3651
20 Ga0070679_100070288 3300005530 Bacteria 3493
21 Ga0070679_100140570 3300005530 Archaea 2394
22 Ga0070684_100039151 3300005535 Bacteria 4077
23 Ga0070704_100074250 3300005549 Bacteria 2480
24 Ga0068855_100286379 3300005563 Bacteria 1828
25 Ga0081539_10022691 3300005985 Bacteria 4140
26 Ga0070717_10127568 3300006028 Bacteria 2185
27 Ga0070717_10410381 3300006028 Unclassified 1217
28 Ga0097621_100082606 3300006237 Bacteria 2676
29 Ga0075428_100010932 3300006844 Bacteria 10097
30 Ga0075430_100001805 3300006846 Bacteria 17508
31 Ga0105240_10019590 3300009093 Bacteria 9037
32 Ga0105245_10129749 3300009098 Bacteria 2364
33 Ga0114129_10428008 3300009147 Unclassified 1740
34 Ga0105243_10194559 3300009148 Bacteria 1774
35 Ga0105242_10125333 3300009176 Bacteria 2210
36 Ga0157371_10139294 3300013102 Bacteria 1728
37 Ga0157370_10025150 3300013104 Bacteria 5893
38 Ga0157370_10428607 3300013104 Bacteria 1216
39 Ga0157369_10006814 3300013105 Bacteria 13177
40 Ga0157369_10016604 3300013105 Bacteria 8277
41 Ga0157369_10136114 3300013105 Bacteria 2601
42 Ga0157369_10371478 3300013105 Bacteria 1484
43 Ga0157369_10402953 3300013105 Bacteria 1419
44 Ga0157369_10628371 3300013105 Archaea 1108
45 Ga0157374_10460992 3300013296 Unclassified 1273
46 Ga0157372_10098644 3300013307 Bacteria 3333
47 Ga0157372_10553155 3300013307 Bacteria 1341
48 Ga0206353_10082814 3300020082 Unclassified 2149
49 Ga0207705_10159551 3300025909 Bacteria 1694
50 Ga0207707_10064555 3300025912 Bacteria 3187
51 Ga0207707_10193396 3300025912 Bacteria 1774
52 Ga0207707_10205668 3300025912 Bacteria 1716
53 Ga0207660_10046060 3300025917 Bacteria 3076
54 Ga0207657_10021691 3300025919 Bacteria 6037
55 Ga0207657_10024610 3300025919 Bacteria 5570
56 Ga0207657_10110219 3300025919 Bacteria 2274
57 Ga0207652_10032198 3300025921 Bacteria 4405
58 Ga0207652_10033399 3300025921 Bacteria 4332
59 Ga0207652_10171983 3300025921 Bacteria 1944
60 Ga0207652_10334556 3300025921 Bacteria 1367
61 Ga0207646_10000502 3300025922 Bacteria 52324
62 Ga0207646_10073373 3300025922 Bacteria 3057
63 Ga0207646_10194301 3300025922 Bacteria 1833
64 Ga0207700_10058384 3300025928 Bacteria 2914
65 Ga0207664_10000789 3300025929 Bacteria 21390
66 Ga0207664_10033946 3300025929 Bacteria 3926
67 Ga0207690_10246732 3300025932 Bacteria 1377
68 Ga0207709_10326119 3300025935 Unclassified 1151
69 Ga0207665_10005937 3300025939 Bacteria 8125
70 Ga0207691_10098456 3300025940 Bacteria 2612
71 Ga0207661_10055087 3300025944 Bacteria 3188
72 Ga0207661_10127634 3300025944 Bacteria 2174
73 Ga0207661_10252614 3300025944 Bacteria 1568
74 Ga0207679_10204445 3300025945 Unclassified 1652
75 Ga0207708_10065087 3300026075 Bacteria 2786
76 Ga0207698_10066000 3300026142 Bacteria 2846
77 Ga0265319_1004321 3300028563 Bacteria 7062
78 Ga0265338_10005902 3300028800 Bacteria 15784
79 Ga0265339_10006175 3300031249 Bacteria 7893
80 Ga0265327_10036954 3300031251 Bacteria 2679
81 Ga0265316_10013688 3300031344 Bacteria 7195
82 Ga0307416_100012167 3300032002 Bacteria 5780
83 Ga0373924_0088086 3300035410 Bacteria 1326
84 Ga0373933_0068549 3300035724 Bacteria 2155
85 Ga0373933_0069224 3300035724 Bacteria 2145
86 Ga0373937_0016053 3300036401 Bacteria 6642
87 Ga0395899_0057859 3300037312 Bacteria 2860
88 Ga0395898_0071190 3300037466 Bacteria 3360
89 Ga0395898_0081955 3300037466 Bacteria 3110
90 Ga0395905_0065321 3300037471 Bacteria 3406
91 Ga0395905_0572158 3300037471 Bacteria 1031
92 Ga0395901_0007472 3300038443 Bacteria 11034
93 Ga0395901_0017122 3300038443 Bacteria 7389
94 Ga0395901_0023336 3300038443 Bacteria 6340
95 Ga0395901_0114142 3300038443 Unclassified 2837
96 Ga0395901_0264708 3300038443 Bacteria 1789
97 Ga0395901_0324242 3300038443 Bacteria 1593
98 Ga0436360_1202685 3300039438 Bacteria 4165
99 Ga0436360_1360389 3300039438 Unclassified 1270
100 Ga0466969_0028170 3300044656 Bacteria 2872
101 Ga0466969_0034002 3300044656 Bacteria 2584
102 Ga0466965_0026287 3300044683 Bacteria 2822
103 Ga0466966_0004033 3300044684 Bacteria 9698
104 Ga0466961_0002714 3300044693 Bacteria 11004
105 Ga0466963_0006982 3300044694 Bacteria 6720
106 Ga0466963_0008542 3300044694 Bacteria 6148
107 Ga0466963_0026715 3300044694 Bacteria 3693
108 Ga0466963_0138848 3300044694 Bacteria 1683
109 Ga0466964_0004480 3300044706 Bacteria 5160
110 Ga0466964_0049295 3300044706 Bacteria 1724
111 Ga0466971_0001870 3300044719 Bacteria 8943
112 Ga0466968_0004874 3300044735 Bacteria 5022
113 Ga0466968_0006248 3300044735 Bacteria 4483
114 Ga0466957_0009680 3300044842 Bacteria 5503
115 Ga0466957_0022254 3300044842 Bacteria 3738
116 Ga0466957_0073905 3300044842 Bacteria 2114
117 Ga0466957_0102379 3300044842 Bacteria 1806
118 Ga0466960_0077660 3300044901 Bacteria 1666
119 Ga0466960_0095081 3300044901 Bacteria 1525
120 Ga0466959_0006028 3300045049 Bacteria 8368
121 Ga0466959_0035187 3300045049 Bacteria 3706
122 Ga0466959_0059715 3300045049 Bacteria 2776
123 Ga0466958_0020069 3300045836 Bacteria 3895
124 Ga0466958_0027550 3300045836 Bacteria 3363
125 Ga0466967_0003478 3300045976 Bacteria 10284
126 Ga0466967_0008612 3300045976 Bacteria 7497
127 Ga0466967_0009864 3300045976 Bacteria 7121
128 Ga0466967_0014509 3300045976 Bacteria 6140
129 Ga0466967_0031216 3300045976 Bacteria 4482
130 Ga0466967_0043581 3300045976 Bacteria 3886
131 Ga0466967_0045571 3300045976 Bacteria 3811
132 Ga0466967_0077713 3300045976 Bacteria 2988
133 Ga0466967_0160444 3300045976 Bacteria 2110
134 Ga0466967_0176333 3300045976 Bacteria 2013
135 Ga0466967_0225492 3300045976 Bacteria 1782
136 Ga0466967_0416426 3300045976 Bacteria 1309
137 Ga0495592_0093712 3300046454 Bacteria 2150
138 Ga0495651_0012027 3300046462 Bacteria 6661
139 Ga0495653_0129389 3300046463 Bacteria 1789
140 Ga0495664_0030024 3300046477 Bacteria 3183
141 Ga0495608_0045230 3300046511 Bacteria 2935
142 Ga0495628_0004790 3300046516 Bacteria 11916
143 Ga0495644_0031498 3300046523 Bacteria 2004
144 Ga0495644_0066742 3300046523 Unclassified 1352
145 Ga0495652_0029275 3300046529 Bacteria 4839
146 Ga0495652_0135417 3300046529 Unclassified 1944
147 Ga0495652_0180787 3300046529 Bacteria 1619
148 Ga0495586_0107566 3300046535 Bacteria 1551
149 Ga0495587_0069988 3300046536 Bacteria 2042
150 Ga0495667_0062620 3300046559 Bacteria 2437
151 Ga0495634_0036753 3300046642 Bacteria 3348
152 Ga0495635_0112181 3300046663 Bacteria 1862
153 Ga0495599_0009602 3300046678 Bacteria 5919
154 Ga0495623_0045462 3300046679 Bacteria 2789
155 Ga0495658_0029687 3300046683 Bacteria 2963
156 Ga0495600_0071080 3300046809 Bacteria 2274
157 Ga0495604_0086594 3300047317 Bacteria 2335
158 Ga0495604_0176639 3300047317 Bacteria 1497
159 Ga0495680_0012714 3300047322 Bacteria 7390
160 Ga0495684_0082158 3300047471 Bacteria 2445
161 Ga0495602_0032377 3300048088 Bacteria 4922
162 Ga0496100_0017841 3300048903 Bacteria 4197
163 Ga0496100_0054275 3300048903 Bacteria 2613
164 Ga0496101_0127120 3300048904 Unclassified 1932
165 Ga0496103_0005252 3300048906 Bacteria 7776
166 Ga0496104_0104452 3300048907 Bacteria 2714
167 Ga0496105_0016087 3300048908 Bacteria 5966
168 Ga0496105_0296668 3300048908 Bacteria 1300
169 Ga0496106_0022161 3300048909 Bacteria 4717
170 Ga0496107_0059682 3300048910 Bacteria 2760
171 Ga0496109_0235248 3300048912 Bacteria 1724
172 Ga0496110_0061900 3300048913 Bacteria 3304
173 Ga0496110_0084393 3300048913 Bacteria 2835
174 Ga0496111_0025491 3300048914 Bacteria 4172
175 Ga0496112_0022196 3300048915 Bacteria 6049
176 Ga0496112_0092928 3300048915 Bacteria 2986
177 Ga0496112_0221095 3300048915 Bacteria 1850
178 Ga0496112_0457540 3300048915 Bacteria 1214
179 Ga0496114_0103198 3300048917 Unclassified 2437
180 Ga0496114_0140448 3300048917 Bacteria 2091
181 Ga0496115_0000719 3300048918 Bacteria 24524
182 Ga0496115_0002151 3300048918 Bacteria 14090
183 Ga0501031_0002786 3300049568 Bacteria 11145
184 Ga0501034_0009074 3300049571 Bacteria 10444
185 Ga0501047_0064413 3300049581 Bacteria 3535
186 Ga0501067_0013069 3300049583 Bacteria 4595
187 Ga0501067_0041660 3300049583 Bacteria 2550
188 Ga0501067_0048811 3300049583 Bacteria 2347
189 Ga0501073_0088486 3300049589 Bacteria 2153
190 Ga0501074_0064352 3300049590 Bacteria 2640
191 Ga0501079_0023324 3300049741 Bacteria 4749
192 Ga0501080_0000535 3300049742 Bacteria 29918
193 Ga0501080_0136569 3300049742 Bacteria 2269
194 Ga0501083_0002636 3300049744 Bacteria 12354
195 nmdc:mga05p37_19675_c1 3300050507 Bacteria 8168
196 nmdc:mga09592_28161_c1 3300050508 Bacteria 4667
197 nmdc:mga0n895_29995_c1 3300050512 Bacteria 5193
198 Ga0495601_0015514 3300053077 Bacteria 4604
199 Ga0495612_0034335 3300053078 Bacteria 2054
200 Ga0495612_0039946 3300053078 Bacteria 1910
201 Ga0495595_0080692 3300053084 Unclassified 1549
202 Ga0495619_0021703 3300053085 Bacteria 4102
203 Ga0466962_0008372 3300061719 Bacteria 4956
204 Ga0466962_0015111 3300061719 Bacteria 3722
205 Ga0070698_100085474
206 Ga0070658_10009482
207 Ga0070683_100056747
208 Ga0070680_100054526
209 Ga0070660_100030204
210 Ga0070660_100120572
211 Ga0070714_100106903
212 Ga0070714_100111114
213 Ga0070711_100070548
214 Ga0070711_100138949
215 Ga0070711_100302635
216 Ga0070700_100063798
217 Ga0070681_10019235
218 Ga0070681_10049353
219 Ga0070707_100060437
220 Ga0070698_100103894
221 Ga0070699_100074268
222 Ga0070679_100037063
223 Ga0070679_100064501
224 Ga0070679_100070288
225 Ga0070679_100140570
226 Ga0070684_100039151
227 Ga0070704_100074250
228 Ga0068855_100286379
229 Ga0081539_10022691
230 Ga0070717_10127568
231 Ga0070717_10410381
232 Ga0097621_100082606
233 Ga0075428_100010932
234 Ga0075430_100001805
235 Ga0105240_10019590
236 Ga0105245_10129749
237 Ga0114129_10428008
238 Ga0105243_10194559
239 Ga0105242_10125333
240 Ga0157371_10139294
241 Ga0157370_10025150
242 Ga0157370_10428607
243 Ga0157369_10006814
244 Ga0157369_10016604
245 Ga0157369_10136114
246 Ga0157369_10371478
247 Ga0157369_10402953
248 Ga0157369_10628371
249 Ga0157374_10460992
250 Ga0157372_10098644
251 Ga0157372_10553155
252 Ga0206353_10082814
253 Ga0207705_10159551
254 Ga0207707_10064555
255 Ga0207707_10193396
256 Ga0207707_10205668
257 Ga0207660_10046060
258 Ga0207657_10021691
259 Ga0207657_10024610
260 Ga0207657_10110219
261 Ga0207652_10032198
262 Ga0207652_10033399
263 Ga0207652_10171983
264 Ga0207652_10334556
265 Ga0207646_10000502
266 Ga0207646_10073373
267 Ga0207646_10194301
268 Ga0207700_10058384
269 Ga0207664_10000789
270 Ga0207664_10033946
271 Ga0207690_10246732
272 Ga0207709_10326119
273 Ga0207665_10005937
274 Ga0207691_10098456
275 Ga0207661_10055087
276 Ga0207661_10127634
277 Ga0207661_10252614
278 Ga0207679_10204445
279 Ga0207708_10065087
280 Ga0207698_10066000
281 Ga0265319_1004321
282 Ga0265338_10005902
283 Ga0265339_10006175
284 Ga0265327_10036954
285 Ga0265316_10013688
286 Ga0307416_100012167
287 Ga0373924_0088086
288 Ga0373933_0068549
289 Ga0373933_0069224
290 Ga0373937_0016053
291 Ga0395899_0057859
292 Ga0395898_0071190
293 Ga0395898_0081955
294 Ga0395905_0065321
295 Ga0395905_0572158
296 Ga0395901_0007472
297 Ga0395901_0017122
298 Ga0395901_0023336
299 Ga0395901_0114142
300 Ga0395901_0264708
301 Ga0395901_0324242
302 Ga0436360_1202685
303 Ga0436360_1360389
304 Ga0466969_0028170
305 Ga0466969_0034002
306 Ga0466965_0026287
307 Ga0466966_0004033
308 Ga0466961_0002714
309 Ga0466963_0006982
310 Ga0466963_0008542
311 Ga0466963_0026715
312 Ga0466963_0138848
313 Ga0466964_0004480
314 Ga0466964_0049295
315 Ga0466971_0001870
316 Ga0466968_0004874
317 Ga0466968_0006248
318 Ga0466957_0009680
319 Ga0466957_0022254
320 Ga0466957_0073905
321 Ga0466957_0102379
322 Ga0466960_0077660
323 Ga0466960_0095081
324 Ga0466959_0006028
325 Ga0466959_0035187
326 Ga0466959_0059715
327 Ga0466958_0020069
328 Ga0466958_0027550
329 Ga0466967_0003478
330 Ga0466967_0008612
331 Ga0466967_0009864
332 Ga0466967_0014509
333 Ga0466967_0031216
334 Ga0466967_0043581
335 Ga0466967_0045571
336 Ga0466967_0077713
337 Ga0466967_0160444
338 Ga0466967_0176333
339 Ga0466967_0225492
340 Ga0466967_0416426
341 Ga0495592_0093712
342 Ga0495651_0012027
343 Ga0495653_0129389
344 Ga0495664_0030024
345 Ga0495608_0045230
346 Ga0495628_0004790
347 Ga0495644_0031498
348 Ga0495644_0066742
349 Ga0495652_0029275
350 Ga0495652_0135417
351 Ga0495652_0180787
352 Ga0495586_0107566
353 Ga0495587_0069988
354 Ga0495667_0062620
355 Ga0495634_0036753
356 Ga0495635_0112181
357 Ga0495599_0009602
358 Ga0495623_0045462
359 Ga0495658_0029687
360 Ga0495600_0071080
361 Ga0495604_0086594
362 Ga0495604_0176639
363 Ga0495680_0012714
364 Ga0495684_0082158
365 Ga0495602_0032377
366 Ga0496100_0017841
367 Ga0496100_0054275
368 Ga0496101_0127120
369 Ga0496103_0005252
370 Ga0496104_0104452
371 Ga0496105_0016087
372 Ga0496105_0296668
373 Ga0496106_0022161
374 Ga0496107_0059682
375 Ga0496109_0235248
376 Ga0496110_0061900
377 Ga0496110_0084393
378 Ga0496111_0025491
379 Ga0496112_0022196
380 Ga0496112_0092928
381 Ga0496112_0221095
382 Ga0496112_0457540
383 Ga0496114_0103198
384 Ga0496114_0140448
385 Ga0496115_0000719
386 Ga0496115_0002151
387 Ga0501031_0002786
388 Ga0501034_0009074
389 Ga0501047_0064413
390 Ga0501067_0013069
391 Ga0501067_0041660
392 Ga0501067_0048811
393 Ga0501073_0088486
394 Ga0501074_0064352
395 Ga0501079_0023324
396 Ga0501080_0000535
397 Ga0501080_0136569
398 Ga0501083_0002636
399 nmdc:mga05p37_19675_c1
400 nmdc:mga09592_28161_c1
401 nmdc:mga0n895_29995_c1
402 Ga0495601_0015514
403 Ga0495612_0034335
404 Ga0495612_0039946
405 Ga0495595_0080692
406 Ga0495619_0021703
407 Ga0466962_0008372
408 Ga0466962_0015111

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

31

188

0.86

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

145

269

0.85

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

17

189

0.81

PF13691

Lactamase_B_4

tRNase Z endonuclease

10

70

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cbn-assembly1.cif.gz_A-2 crystal structure of zipd from escherichia coli 0.8425 3 290
2fk6-assembly1.cif.gz_A-2 crystal structure of rnase z/trna(thr) complex 0.8407 4 292
4gcw-assembly1.cif.gz_A crystal structure of rnase z in complex with precursor trna(thr) 0.8295 4 293
2cbn-assembly1.cif.gz_A-2 crystal structure of zipd from escherichia coli 0.794 3 290
1y44-assembly1.cif.gz_A crystal structure of rnase z 0.7933 4 293
ID Description Score Start End Superfamily
af_P0A8V0_1_305_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.886 4 290 3.60.15.10
af_P0A8V0_1_305_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8339 4 290 3.60.15.10
af_Q2FY67_1_306_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8332 4 290 3.60.15.10
af_Q58897_3_311_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8318 3 287 3.60.15.10
af_D3ZB91_3_360_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8059 4 292 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A7W0UMD4-F1-model_v4 Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z) 0.9309 2 306 GO:0008270
GO:0042781
AF-A0A7W0SZ07-F1-model_v4 Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z) 0.9295 2 306 GO:0008270
GO:0042781
AF-A0A7J4P748-F1-model_v4 deleted 0.9281 35 292
AF-A0A538LK30-F1-model_v4 Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z) 0.9239 1 312 GO:0008270
GO:0042781
AF-A0A538M9Y7-F1-model_v4 Ribonuclease Z 0.9194 141 304 GO:0042781

Map