F311908

General Info

Members Datasets Scaffolds Average Seq Length
203 155 406 234

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2867302475|2867305789
Length 260
Sequence DVGTDGRAGAATDSRDAGWDGTAAGGRSRATAAPATDVVVRVEGVSRTFGRGEHAVHAVRDVSFTAARGELLAIRGRSGAGKTTLLNLIGGLDRPDSGRVVVAGHDVTAAGERELLDLRRGTVSFVFQTFGLVPILSAAENVGVPLRLARVPAAEREERVAMLLELVGLGGHAAQRPYELSGGQQQRVAVARALANEPALLIADEPTGQLDSETGRSIMNLLRAVVHARGTTILVATHDPALIELADRTLTLRDGRLSDA

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
43 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
44 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
45 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
53 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
54 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
58 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
59 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
63 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
70 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
74 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
75 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
76 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
79 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
103 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
104 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
105 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
106 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
110 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
111 2501939600 Micromonospora sp. L5 Isolate Unclassified
112 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
113 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
114 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
115 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
116 2808606394 Promicromonospora sp. C35 Isolate Unclassified
117 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
118 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
119 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
120 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
121 2855683550 Micromonospora sp. RP3T Isolate Unclassified
122 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
123 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
124 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
125 2858868258 Micromonospora sp. MH33 Isolate Unclassified
126 2858882152 Micromonospora noduli MED15 Isolate Nodule
127 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
128 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
129 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
130 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
131 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
132 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
133 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
134 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
135 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
136 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
137 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
138 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
139 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
140 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
141 2902582711 Micromonospora sp. AP08 Isolate Unclassified
142 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
143 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
144 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
145 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
146 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
147 649633069 Micromonospora sp. L5 Isolate Unclassified
148 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
149 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
150 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
151 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
152 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
153 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
154 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
155 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.34
Metatranscriptomes 0
Isolates 22.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.48
Nodule 2.96
Rhizoplane 5.42
Rhizosphere 71.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10004847 3300003203 Bacteria 6254
2 Ga0070683_100162932 3300005329 Bacteria 2116
3 Ga0070667_100118622 3300005367 Bacteria 2300
4 Ga0070709_10000569 3300005434 Bacteria 21582
5 Ga0070714_100215197 3300005435 Bacteria 1763
6 Ga0070714_100354505 3300005435 Bacteria 1378
7 Ga0070713_100015411 3300005436 Bacteria 5713
8 Ga0070713_100019691 3300005436 Bacteria 5160
9 Ga0070713_100338567 3300005436 Bacteria 1393
10 Ga0070710_10000721 3300005437 Bacteria 15781
11 Ga0070711_100019766 3300005439 Bacteria 4327
12 Ga0070706_100018781 3300005467 Bacteria 6375
13 Ga0070698_100046718 3300005471 Bacteria 4427
14 Ga0070684_100235590 3300005535 Bacteria 1672
15 Ga0068856_100306837 3300005614 Bacteria 1605
16 Ga0068852_100136766 3300005616 Bacteria 2263
17 Ga0081539_10000143 3300005985 Bacteria 165345
18 Ga0070717_10097065 3300006028 Bacteria 2497
19 Ga0070717_10158660 3300006028 Bacteria 1961
20 Ga0070717_10172592 3300006028 Bacteria 1881
21 Ga0070716_100000311 3300006173 Bacteria 19573
22 Ga0070712_100125885 3300006175 Bacteria 1935
23 Ga0070712_100535120 3300006175 Bacteria 986
24 Ga0075428_100002221 3300006844 Bacteria 21037
25 Ga0075428_100111898 3300006844 Bacteria 2974
26 Ga0075428_100547456 3300006844 Bacteria 1237
27 Ga0075430_100002614 3300006846 Bacteria 15040
28 Ga0075430_100005903 3300006846 Bacteria 10339
29 Ga0075430_100305508 3300006846 Bacteria 1316
30 Ga0075431_100009930 3300006847 Bacteria 9561
31 Ga0075431_100093598 3300006847 Bacteria 3101
32 Ga0075429_100002657 3300006880 Bacteria 15040
33 Ga0075429_100009673 3300006880 Bacteria 8360
34 Ga0075429_100112203 3300006880 Bacteria 2383
35 Ga0075429_100137742 3300006880 Bacteria 2136
36 Ga0075429_100361509 3300006880 Bacteria 1271
37 Ga0068865_100169632 3300006881 Bacteria 1672
38 Ga0114129_10000107 3300009147 Bacteria 82144
39 Ga0114129_10010950 3300009147 Bacteria 12919
40 Ga0114129_10133675 3300009147 Bacteria 3406
41 Ga0114129_10150654 3300009147 Bacteria 3183
42 Ga0114129_10212604 3300009147 Bacteria 2614
43 Ga0114129_10239868 3300009147 Bacteria 2437
44 Ga0157369_10027116 3300013105 Bacteria 6351
45 Ga0157375_11126058 3300013308 Bacteria 919
46 Ga0157380_10663107 3300014326 Bacteria 1043
47 Ga0157380_10750461 3300014326 Bacteria 987
48 Ga0163161_10058231 3300017792 Bacteria 2808
49 Ga0207692_10004939 3300025898 Bacteria 5305
50 Ga0207699_10000241 3300025906 Bacteria 30714
51 Ga0207684_10006166 3300025910 Bacteria 10962
52 Ga0207693_10005330 3300025915 Bacteria 10742
53 Ga0207693_10335786 3300025915 Bacteria 1183
54 Ga0207663_10013945 3300025916 Bacteria 4385
55 Ga0207700_10007727 3300025928 Bacteria 6605
56 Ga0207700_10252041 3300025928 Bacteria 1508
57 Ga0207700_10299191 3300025928 Bacteria 1389
58 Ga0207664_10006052 3300025929 Bacteria 8286
59 Ga0207664_10104194 3300025929 Bacteria 2348
60 Ga0207704_10682338 3300025938 Bacteria 849
61 Ga0207665_10000765 3300025939 Bacteria 21660
62 Ga0207661_10158912 3300025944 Bacteria 1960
63 Ga0207679_10157590 3300025945 Bacteria 1855
64 Ga0207658_10077800 3300025986 Bacteria 2532
65 Ga0207674_10273681 3300026116 Bacteria 1636
66 Ga0207698_10101130 3300026142 Bacteria 2390
67 Ga0307515_10146751 3300028794 Bacteria 2493
68 Ga0307516_10031613 3300031730 Bacteria 5337
69 Ga0307405_10006248 3300031731 Bacteria 5842
70 Ga0307413_10109647 3300031824 Bacteria 1845
71 Ga0307413_10456791 3300031824 Bacteria 1015
72 Ga0307406_10062751 3300031901 Bacteria 2405
73 Ga0307406_10075766 3300031901 Bacteria 2220
74 Ga0307407_10006772 3300031903 Bacteria 5131
75 Ga0307409_100011453 3300031995 Bacteria 5594
76 Ga0307409_100049181 3300031995 Bacteria 3213
77 Ga0307409_100187325 3300031995 Bacteria 1838
78 Ga0307416_100005282 3300032002 Bacteria 7911
79 Ga0307411_10504757 3300032005 Bacteria 1023
80 Ga0307415_100000022 3300032126 Bacteria 65606
81 Ga0307415_100114868 3300032126 Bacteria 2005
82 Ga0307507_10012884 3300033179 Bacteria 10255
83 Ga0373935_0296835 3300035692 Bacteria 1141
84 Ga0373925_0127643 3300037068 Bacteria 1980
85 Ga0395900_0155111 3300037418 Bacteria 2339
86 Ga0395901_0031444 3300038443 Bacteria 5474
87 Ga0436363_1467643 3300039450 Bacteria 2401
88 Ga0439447_033737 3300041407 Bacteria 1275
89 Ga0439457_060744 3300042014 Bacteria 855
90 Ga0466961_0043007 3300044693 Bacteria 2894
91 Ga0466963_0331010 3300044694 Bacteria 1072
92 Ga0466968_0122574 3300044735 Bacteria 1177
93 Ga0466970_0232880 3300044765 Bacteria 1030
94 Ga0466957_0239276 3300044842 Bacteria 1204
95 Ga0466959_0006254 3300045049 Bacteria 8227
96 Ga0466967_0212363 3300045976 Bacteria 1836
97 Ga0495627_025261 3300046453 Bacteria 1928
98 Ga0495603_0264953 3300046455 Bacteria 989
99 Ga0495606_0000321 3300046507 Bacteria 82490
100 Ga0495652_0286759 3300046529 Bacteria 1203
101 Ga0495645_0050279 3300046543 Bacteria 3035
102 Ga0495668_0004325 3300046616 Bacteria 10151
103 Ga0495625_0101109 3300046660 Bacteria 1980
104 Ga0495636_0214271 3300047318 Bacteria 882
105 Ga0495672_0010998 3300047320 Bacteria 6411
106 Ga0495683_0136516 3300047323 Bacteria 1152
107 Ga0496104_0065027 3300048907 Bacteria 3460
108 Ga0496104_0070863 3300048907 Bacteria 3315
109 Ga0496108_0041878 3300048911 Bacteria 3824
110 Ga0496108_0803442 3300048911 Bacteria 811
111 Ga0496109_0037961 3300048912 Bacteria 4353
112 Ga0496109_0041565 3300048912 Bacteria 4164
113 Ga0496110_0008116 3300048913 Bacteria 8434
114 Ga0496110_0112140 3300048913 Bacteria 2452
115 Ga0496111_0083825 3300048914 Bacteria 2329
116 Ga0496114_0017125 3300048917 Bacteria 5844
117 Ga0496114_0155474 3300048917 Bacteria 1985
118 Ga0496118_0188748 3300048921 Bacteria 1235
119 Ga0496126_0053902 3300048929 Bacteria 3646
120 Ga0501033_0314189 3300049570 Bacteria 1101
121 Ga0501034_0492962 3300049571 Bacteria 1139
122 Ga0501038_0141596 3300049574 Bacteria 1967
123 Ga0501042_0000159 3300049578 Bacteria 30697
124 Ga0501043_0336987 3300049579 Bacteria 1148
125 Ga0501046_0353026 3300049580 Bacteria 1067
126 Ga0501047_0195492 3300049581 Bacteria 1885
127 Ga0501070_0009125 3300049586 Bacteria 8388
128 Ga0501071_0000541 3300049587 Bacteria 19410
129 Ga0501071_0203197 3300049587 Bacteria 1489
130 Ga0501071_0423052 3300049587 Bacteria 1018
131 Ga0501075_0095517 3300049591 Bacteria 2256
132 Ga0501076_0098279 3300049592 Bacteria 2358
133 Ga0501083_0000055 3300049744 Bacteria 82183
134 Ga0501083_0006661 3300049744 Bacteria 8196
135 Ga0501045_0131475 3300049824 Bacteria 1860
136 nmdc:mga05p37_1317463_c1 3300050507 Bacteria 735
137 nmdc:mga05p37_19446_c1 3300050507 Bacteria 8216
138 nmdc:mga05p37_217330_c1 3300050507 Bacteria 2308
139 nmdc:mga05p37_5931_c1 3300050507 Bacteria 14373
140 nmdc:mga05p37_900332_c1 3300050507 Bacteria 954
141 nmdc:mga09592_188845_c1 3300050508 Bacteria 1783
142 nmdc:mga09592_20921_c1 3300050508 Bacteria 5388
143 nmdc:mga09592_289300_c1 3300050508 Bacteria 1421
144 nmdc:mga09592_610_c2 3300050508 Bacteria 22005
145 nmdc:mga0qj67_16025_c1 3300050509 Bacteria 5677
146 nmdc:mga0qj67_233_c1 3300050509 Bacteria 31383
147 nmdc:mga06r32_904_c2 3300050510 Bacteria 14409
148 nmdc:mga06r32_94479_c1 3300050510 Bacteria 2926
149 nmdc:mga0rr50_743543_c1 3300050513 Bacteria 837
150 nmdc:mga08x19_262129_c1 3300050514 Bacteria 1195
151 Ga0495619_0177439 3300053085 Bacteria 1474
152 Ga0500568_0000049 3300053139 Bacteria 116515
153 Ga0500568_0055662 3300053139 Bacteria 1543
154 Ga0500573_0008331 3300053140 Bacteria 5708
155 Ga0501084_0178106 3300054114 Bacteria 1795
156 Ga0501082_0341319 3300060353 Bacteria 1305
157 Ga0466962_0047335 3300061719 Bacteria 2055
158 2867305789 2867302475 Bacteria 7087181
159 2501940854 2501939600 Bacteria 6907073
160 2623587433 2622736626 Bacteria 7181580
161 2739609713 2739367654 Bacteria 6049412
162 2760625165 2758568621 Bacteria 5967089
163 2772643872 2772190715 Bacteria 6959372
164 2809030031 2808606394 Bacteria 6248540
165 2831936957 2831935698 Bacteria 5963223
166 2837270061 2837268691 Bacteria 7850704
167 2855672863 2855670206 Bacteria 7120389
168 2855677318 2855676851 Bacteria 7063653
169 2855688133 2855683550 Bacteria 7134265
170 2856861306 2856858025 Bacteria 7255264
171 2857295340 2857288857 Bacteria 7189066
172 2858855495 2858848962 Bacteria 6963058
173 2858869582 2858868258 Bacteria 7683772
174 2858885412 2858882152 Bacteria 7230291
175 2858892264 2858888857 Bacteria 7060307
176 2858902103 2858895516 Bacteria 7378898
177 2858904005 2858902515 Bacteria 7086037
178 2867315421 2867312974 Bacteria 7058875
179 2867325549 2867319477 Bacteria 7069771
180 2867507269 2867507094 Bacteria 6506033
181 2869048788 2869048445 Bacteria 6875584
182 2869063178 2869061728 Bacteria 7112407
183 2869072389 2869068681 Bacteria 7205615
184 2880492793 2880489317 Bacteria 7096270
185 2880499520 2880495981 Bacteria 7340502
186 2887484621 2887478801 Bacteria 8972725
187 2891398467 2891395885 Bacteria 9251614
188 2891555618 2891554331 Bacteria 8812224
189 2902587769 2902582711 Bacteria 6187705
190 2929221485 2929219909 Bacteria 6984360
191 2929228117 2929226422 Bacteria 7248583
192 2935410650 2935409751 Bacteria 4179611
193 2996226822 2996221748 Bacteria 6799777
194 3003005396 3002998708 Bacteria 11715108
195 649812060 649633069 Bacteria 6962533
196 8003831165 8003830390 Bacteria 6541657
197 8003860244 8003856774 Bacteria 7675274
198 8003874970 8003870546 Bacteria 7396674
199 8054706018 8054704163 Bacteria 7247792
200 8054732163 8054727385 Bacteria 7558670
201 8054740967 8054734606 Bacteria 6947278
202 8055414762 8055412473 Bacteria 6257500
203 8056580580 8056579771 Bacteria 5840325
204 JGI25406J46586_10004847
205 Ga0070683_100162932
206 Ga0070667_100118622
207 Ga0070709_10000569
208 Ga0070714_100215197
209 Ga0070714_100354505
210 Ga0070713_100015411
211 Ga0070713_100019691
212 Ga0070713_100338567
213 Ga0070710_10000721
214 Ga0070711_100019766
215 Ga0070706_100018781
216 Ga0070698_100046718
217 Ga0070684_100235590
218 Ga0068856_100306837
219 Ga0068852_100136766
220 Ga0081539_10000143
221 Ga0070717_10097065
222 Ga0070717_10158660
223 Ga0070717_10172592
224 Ga0070716_100000311
225 Ga0070712_100125885
226 Ga0070712_100535120
227 Ga0075428_100002221
228 Ga0075428_100111898
229 Ga0075428_100547456
230 Ga0075430_100002614
231 Ga0075430_100005903
232 Ga0075430_100305508
233 Ga0075431_100009930
234 Ga0075431_100093598
235 Ga0075429_100002657
236 Ga0075429_100009673
237 Ga0075429_100112203
238 Ga0075429_100137742
239 Ga0075429_100361509
240 Ga0068865_100169632
241 Ga0114129_10000107
242 Ga0114129_10010950
243 Ga0114129_10133675
244 Ga0114129_10150654
245 Ga0114129_10212604
246 Ga0114129_10239868
247 Ga0157369_10027116
248 Ga0157375_11126058
249 Ga0157380_10663107
250 Ga0157380_10750461
251 Ga0163161_10058231
252 Ga0207692_10004939
253 Ga0207699_10000241
254 Ga0207684_10006166
255 Ga0207693_10005330
256 Ga0207693_10335786
257 Ga0207663_10013945
258 Ga0207700_10007727
259 Ga0207700_10252041
260 Ga0207700_10299191
261 Ga0207664_10006052
262 Ga0207664_10104194
263 Ga0207704_10682338
264 Ga0207665_10000765
265 Ga0207661_10158912
266 Ga0207679_10157590
267 Ga0207658_10077800
268 Ga0207674_10273681
269 Ga0207698_10101130
270 Ga0307515_10146751
271 Ga0307516_10031613
272 Ga0307405_10006248
273 Ga0307413_10109647
274 Ga0307413_10456791
275 Ga0307406_10062751
276 Ga0307406_10075766
277 Ga0307407_10006772
278 Ga0307409_100011453
279 Ga0307409_100049181
280 Ga0307409_100187325
281 Ga0307416_100005282
282 Ga0307411_10504757
283 Ga0307415_100000022
284 Ga0307415_100114868
285 Ga0307507_10012884
286 Ga0373935_0296835
287 Ga0373925_0127643
288 Ga0395900_0155111
289 Ga0395901_0031444
290 Ga0436363_1467643
291 Ga0439447_033737
292 Ga0439457_060744
293 Ga0466961_0043007
294 Ga0466963_0331010
295 Ga0466968_0122574
296 Ga0466970_0232880
297 Ga0466957_0239276
298 Ga0466959_0006254
299 Ga0466967_0212363
300 Ga0495627_025261
301 Ga0495603_0264953
302 Ga0495606_0000321
303 Ga0495652_0286759
304 Ga0495645_0050279
305 Ga0495668_0004325
306 Ga0495625_0101109
307 Ga0495636_0214271
308 Ga0495672_0010998
309 Ga0495683_0136516
310 Ga0496104_0065027
311 Ga0496104_0070863
312 Ga0496108_0041878
313 Ga0496108_0803442
314 Ga0496109_0037961
315 Ga0496109_0041565
316 Ga0496110_0008116
317 Ga0496110_0112140
318 Ga0496111_0083825
319 Ga0496114_0017125
320 Ga0496114_0155474
321 Ga0496118_0188748
322 Ga0496126_0053902
323 Ga0501033_0314189
324 Ga0501034_0492962
325 Ga0501038_0141596
326 Ga0501042_0000159
327 Ga0501043_0336987
328 Ga0501046_0353026
329 Ga0501047_0195492
330 Ga0501070_0009125
331 Ga0501071_0000541
332 Ga0501071_0203197
333 Ga0501071_0423052
334 Ga0501075_0095517
335 Ga0501076_0098279
336 Ga0501083_0000055
337 Ga0501083_0006661
338 Ga0501045_0131475
339 nmdc:mga05p37_1317463_c1
340 nmdc:mga05p37_19446_c1
341 nmdc:mga05p37_217330_c1
342 nmdc:mga05p37_5931_c1
343 nmdc:mga05p37_900332_c1
344 nmdc:mga09592_188845_c1
345 nmdc:mga09592_20921_c1
346 nmdc:mga09592_289300_c1
347 nmdc:mga09592_610_c2
348 nmdc:mga0qj67_16025_c1
349 nmdc:mga0qj67_233_c1
350 nmdc:mga06r32_904_c2
351 nmdc:mga06r32_94479_c1
352 nmdc:mga0rr50_743543_c1
353 nmdc:mga08x19_262129_c1
354 Ga0495619_0177439
355 Ga0500568_0000049
356 Ga0500568_0055662
357 Ga0500573_0008331
358 Ga0501084_0178106
359 Ga0501082_0341319
360 Ga0466962_0047335
361 2867305789
362 2501940854
363 2623587433
364 2739609713
365 2760625165
366 2772643872
367 2809030031
368 2831936957
369 2837270061
370 2855672863
371 2855677318
372 2855688133
373 2856861306
374 2857295340
375 2858855495
376 2858869582
377 2858885412
378 2858892264
379 2858902103
380 2858904005
381 2867315421
382 2867325549
383 2867507269
384 2869048788
385 2869063178
386 2869072389
387 2880492793
388 2880499520
389 2887484621
390 2891398467
391 2891555618
392 2902587769
393 2929221485
394 2929228117
395 2935410650
396 2996226822
397 3003005396
398 649812060
399 8003831165
400 8003860244
401 8003874970
402 8054706018
403 8054732163
404 8054740967
405 8055414762
406 8056580580

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

59

208

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9768 2 220
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9631 2 222
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9614 1 224
7w7a-assembly2.cif.gz_E heme exporter in complex with mn-containing protoporphyrin ix, mn-anomalous data 0.9587 1 219
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9582 2 221
ID Description Score Start End Superfamily
af_Q2FUZ1_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.981 1 221 3.40.50.300
af_A4I4M8_123_401_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9762 27 221 3.40.50.300
af_P14175_33_289_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9737 21 222 3.40.50.300
af_Q4DP20_46_317_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9726 2 222 3.40.50.300
af_Q2G0D8_1_227_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9698 2 222 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7V9TM51-F1-model_v4 ABC transporter ATP-binding protein 0.9884 21 222 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A6L7MD24-F1-model_v4 ABC transporter ATP-binding protein 0.9869 2 224 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A3C1D688-F1-model_v4 ABC transporter 0.9855 2 193 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A538RLX8-F1-model_v4 ABC transporter ATP-binding protein 0.9842 2 222 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A7V5D996-F1-model_v4 ABC transporter ATP-binding protein 0.9828 2 222 GO:0005524
GO:0005886
GO:0016887
GO:0022857

Map