F311905
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 203 | 146 | 179 | 273 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2824696289|2824698302 |
| Length | 297 |
| Sequence | APTRRSAMTVNSTDPAAPASPGERLRPQARFPVTLEGQPALVTGANSGIGRAVALGLAAAGADVVVNYVVDPVSAEEVVHEIEARGRKAIAIKADVSNEDDVRSMFARAIDHFGTLHIVVNNAGLQRDAPLHEMTIDQWNKVIGVNLTGQFLCAREAVREFKRRGIVGDISAAAGKLVCMSSVHQEIPWAGHANYAASKGGVMQMMRSIAQEVAPIGIRVNGIAPGAIRTPINQRAWETREAYESLMTLVPYKRIGEPDDIAQAVAWLVSDAADYVTGATLFIDGGMTLFPGFASGG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2507262055 | Bradyrhizobium sp. WSM1417 | Isolate | Nodule |
| 2 | 2513237139 | Bradyrhizobium ottawaense USDA 4 | Isolate | Nodule |
| 3 | 2515154123 | Trinickia symbiotica JPY347 | Isolate | Nodule |
| 4 | 2791355196 | Bradyrhizobium sp. Y36 | Isolate | Nodule |
| 5 | 2811994880 | Cellulomonas sp. SLBN-39 | Isolate | Unclassified |
| 6 | 2824696289 | Bradyrhizobium sp. HAMBI 2127 | Isolate | Unclassified |
| 7 | 2842038055 | Bradyrhizobium centrosematis SEMIA 424 | Isolate | Nodule |
| 8 | 2842045827 | Bradyrhizobium centrosematis SEMIA 431 | Isolate | Nodule |
| 9 | 2842324504 | Paraburkholderia fungorum SEMIA 4007 | Isolate | Nodule |
| 10 | 2842348783 | Paraburkholderia fungorum SEMIA 4013 | Isolate | Nodule |
| 11 | 2842454564 | Paraburkholderia fungorum SEMIA 4056 | Isolate | Nodule |
| 12 | 2874645413 | Bradyrhizobium canariense UBMA122 | Isolate | Nodule |
| 13 | 2881665667 | Bradyrhizobium vignae LMG 28791 | Isolate | Unclassified |
| 14 | 2922361189 | Bradyrhizobium australiense WSM 1791 | Isolate | Nodule |
| 15 | 2935769743 | Bradyrhizobium sp. LB12.1 | Isolate | Nodule |
| 16 | 2935785616 | Bradyrhizobium sp. LB5.2 | Isolate | Nodule |
| 17 | 2935793552 | Bradyrhizobium sp. LB8.2 | Isolate | Nodule |
| 18 | 2935975950 | Bradyrhizobium sp. GM2.2 | Isolate | Nodule |
| 19 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 20 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 29 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 30 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 31 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 32 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 34 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 35 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 36 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 37 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 39 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 40 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300021320 | Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 | Metagenome | Nodule |
| 57 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 58 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027296 | Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) | Metagenome | Nodule |
| 82 | 3300027357 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 83 | 3300027361 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 84 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 86 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 87 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 88 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 89 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 90 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 91 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 92 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 93 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 94 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 95 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 96 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 97 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 98 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 99 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 100 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 101 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 102 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 103 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 104 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 105 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 106 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 107 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 108 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 109 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 110 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 111 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 112 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 113 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 114 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 115 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 116 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 117 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 118 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 119 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 120 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 121 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 122 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 123 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 124 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 125 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 126 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 127 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 136 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 138 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 141 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 142 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 143 | 8016603502 | Bradyrhizobium sp. LB7.2 | Isolate | Nodule |
| 144 | 8016613128 | Bradyrhizobium sp. LB7.1 | Isolate | Nodule |
| 145 | 8016622563 | Bradyrhizobium sp. LB13.1 | Isolate | Nodule |
| 146 | 8019668869 | Bradyrhizobium sp. GM2.4 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.68 |
| Metatranscriptomes | 0.49 |
| Isolates | 11.82 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.94 |
| Nodule | 12.32 |
| Rhizoplane | 0 |
| Rhizosphere | 80.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.45 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055539_1002216 | 3300003752 | Bacteria | 3088 |
| 2 | Ga0070670_100018540 | 3300005331 | Bacteria | 5970 |
| 3 | Ga0070680_100068125 | 3300005336 | Bacteria | 2921 |
| 4 | Ga0070680_100314536 | 3300005336 | Bacteria | 1329 |
| 5 | Ga0070682_100029445 | 3300005337 | Bacteria | 3306 |
| 6 | Ga0070663_100004678 | 3300005455 | Bacteria | 8070 |
| 7 | Ga0070681_10002738 | 3300005458 | Bacteria | 16241 |
| 8 | Ga0070681_10030464 | 3300005458 | Bacteria | 5413 |
| 9 | Ga0070681_10482336 | 3300005458 | Bacteria | 1153 |
| 10 | Ga0070706_100245800 | 3300005467 | Bacteria | 1671 |
| 11 | Ga0070707_100023394 | 3300005468 | Bacteria | 5846 |
| 12 | Ga0070707_100204727 | 3300005468 | Bacteria | 1924 |
| 13 | Ga0070707_100584620 | 3300005468 | Bacteria | 1079 |
| 14 | Ga0070698_100247302 | 3300005471 | Bacteria | 1716 |
| 15 | Ga0070679_100066754 | 3300005530 | Bacteria | 3586 |
| 16 | Ga0070679_100400021 | 3300005530 | Bacteria | 1319 |
| 17 | Ga0070679_100437557 | 3300005530 | Bacteria | 1253 |
| 18 | Ga0070684_100126149 | 3300005535 | Bacteria | 2306 |
| 19 | Ga0070697_100037118 | 3300005536 | Bacteria | 3936 |
| 20 | Ga0070697_100078922 | 3300005536 | Bacteria | 2710 |
| 21 | Ga0068853_100041388 | 3300005539 | Bacteria | 3936 |
| 22 | Ga0070693_100100648 | 3300005547 | Bacteria | 1760 |
| 23 | Ga0068855_100005260 | 3300005563 | Bacteria | 15798 |
| 24 | Ga0068855_100022248 | 3300005563 | Bacteria | 7597 |
| 25 | Ga0068856_100072660 | 3300005614 | Bacteria | 3405 |
| 26 | Ga0068856_100106005 | 3300005614 | Bacteria | 2805 |
| 27 | Ga0068856_100340668 | 3300005614 | Bacteria | 1517 |
| 28 | Ga0068852_100196512 | 3300005616 | Bacteria | 1906 |
| 29 | Ga0075366_10119879 | 3300006195 | Bacteria | 1585 |
| 30 | Ga0097621_100170934 | 3300006237 | Bacteria | 1873 |
| 31 | Ga0068871_100038905 | 3300006358 | Bacteria | 3803 |
| 32 | Ga0075434_100382171 | 3300006871 | Bacteria | 1429 |
| 33 | Ga0075435_100175111 | 3300007076 | Bacteria | 1811 |
| 34 | Ga0105240_10003169 | 3300009093 | Bacteria | 25859 |
| 35 | Ga0105240_10214466 | 3300009093 | Bacteria | 2247 |
| 36 | Ga0111539_10495952 | 3300009094 | Bacteria | 1422 |
| 37 | Ga0105241_10023129 | 3300009174 | Bacteria | 4606 |
| 38 | Ga0105237_10025192 | 3300009545 | Bacteria | 6085 |
| 39 | Ga0105237_10759633 | 3300009545 | Bacteria | 976 |
| 40 | Ga0105238_10212654 | 3300009551 | Bacteria | 1910 |
| 41 | Ga0105238_10327947 | 3300009551 | Bacteria | 1517 |
| 42 | Ga0105249_10125667 | 3300009553 | Bacteria | 2442 |
| 43 | Ga0105239_10441869 | 3300010375 | Bacteria | 1475 |
| 44 | Ga0157370_10034004 | 3300013104 | Plasmid | 4967 |
| 45 | Ga0157370_10037898 | 3300013104 | Bacteria | 4667 |
| 46 | Ga0157370_10070467 | 3300013104 | Bacteria | 3300 |
| 47 | Ga0157369_10006685 | 3300013105 | Bacteria | 13314 |
| 48 | Ga0157374_10067911 | 3300013296 | Bacteria | 3353 |
| 49 | Ga0163162_10000260 | 3300013306 | Bacteria | 48090 |
| 50 | Ga0163162_10000415 | 3300013306 | Bacteria | 39169 |
| 51 | Ga0157372_10045918 | 3300013307 | Bacteria | 4847 |
| 52 | Ga0157372_10206815 | 3300013307 | Bacteria | 2274 |
| 53 | Ga0157372_10289133 | 3300013307 | Unclassified | 1906 |
| 54 | Ga0157375_10636111 | 3300013308 | Bacteria | 1224 |
| 55 | Ga0157376_10005957 | 3300014969 | Bacteria | 8565 |
| 56 | Ga0157376_10194570 | 3300014969 | Bacteria | 1862 |
| 57 | Ga0163161_10009536 | 3300017792 | Bacteria | 6713 |
| 58 | Ga0214544_1005903 | 3300021320 | Bacteria | 23182 |
| 59 | Ga0224712_10107409 | 3300022467 | Bacteria | 1193 |
| 60 | Ga0209563_101704 | 3300025230 | Bacteria | 5556 |
| 61 | Ga0209677_100807 | 3300025253 | Bacteria | 15674 |
| 62 | Ga0209677_101717 | 3300025253 | Bacteria | 9111 |
| 63 | Ga0209758_1000631 | 3300025297 | Bacteria | 53996 |
| 64 | Ga0209758_1001287 | 3300025297 | Bacteria | 30893 |
| 65 | Ga0207680_10012223 | 3300025903 | Bacteria | 4368 |
| 66 | Ga0207705_10144101 | 3300025909 | Bacteria | 1781 |
| 67 | Ga0207684_10086413 | 3300025910 | Bacteria | 2671 |
| 68 | Ga0207654_10057442 | 3300025911 | Bacteria | 2261 |
| 69 | Ga0207707_10000134 | 3300025912 | Bacteria | 77031 |
| 70 | Ga0207707_10033574 | 3300025912 | Bacteria | 4491 |
| 71 | Ga0207695_10032292 | 3300025913 | Bacteria | 5731 |
| 72 | Ga0207671_10070273 | 3300025914 | Bacteria | 2610 |
| 73 | Ga0207693_10027177 | 3300025915 | Bacteria | 4524 |
| 74 | Ga0207663_10082321 | 3300025916 | Bacteria | 2111 |
| 75 | Ga0207660_10267418 | 3300025917 | Bacteria | 1354 |
| 76 | Ga0207657_10368733 | 3300025919 | Bacteria | 1131 |
| 77 | Ga0207652_10004279 | 3300025921 | Bacteria | 11648 |
| 78 | Ga0207652_10066878 | 3300025921 | Bacteria | 3115 |
| 79 | Ga0207652_10202951 | 3300025921 | Bacteria | 1784 |
| 80 | Ga0207646_10018134 | 3300025922 | Bacteria | 6570 |
| 81 | Ga0207650_10004839 | 3300025925 | Bacteria | 9201 |
| 82 | Ga0207650_10043794 | 3300025925 | Unclassified | 3287 |
| 83 | Ga0207670_10000002 | 3300025936 | Bacteria | 783058 |
| 84 | Ga0207667_10057021 | 3300025949 | Bacteria | 4102 |
| 85 | Ga0207667_10131767 | 3300025949 | Unclassified | 2575 |
| 86 | Ga0207639_10036154 | 3300026041 | Bacteria | 3658 |
| 87 | Ga0207678_10011547 | 3300026067 | Bacteria | 7759 |
| 88 | Ga0207678_10060692 | 3300026067 | Bacteria | 3252 |
| 89 | Ga0207678_10294249 | 3300026067 | Bacteria | 1395 |
| 90 | Ga0207702_10031969 | 3300026078 | Bacteria | 4389 |
| 91 | Ga0207702_10273252 | 3300026078 | Bacteria | 1595 |
| 92 | Ga0207641_10043313 | 3300026088 | Bacteria | 3780 |
| 93 | Ga0209389_1000413 | 3300027296 | Bacteria | 25381 |
| 94 | Ga0209589_1013487 | 3300027357 | Bacteria | 10643 |
| 95 | Ga0209489_100597 | 3300027361 | Bacteria | 69726 |
| 96 | Ga0268264_10790812 | 3300028381 | Bacteria | 947 |
| 97 | Ga0265334_10048582 | 3300028573 | Bacteria | 1634 |
| 98 | Ga0265318_10000085 | 3300028577 | Bacteria | 84720 |
| 99 | Ga0265338_10019508 | 3300028800 | Bacteria | 7188 |
| 100 | Ga0265330_10002861 | 3300031235 | Bacteria | 9230 |
| 101 | Ga0265332_10002067 | 3300031238 | Bacteria | 10489 |
| 102 | Ga0265328_10002348 | 3300031239 | Bacteria | 8527 |
| 103 | Ga0265320_10000025 | 3300031240 | Bacteria | 168565 |
| 104 | Ga0265329_10008826 | 3300031242 | Bacteria | 3800 |
| 105 | Ga0265339_10048902 | 3300031249 | Bacteria | 2317 |
| 106 | Ga0265331_10000063 | 3300031250 | Bacteria | 166922 |
| 107 | Ga0265316_10001339 | 3300031344 | Bacteria | 26511 |
| 108 | Ga0265316_10002592 | 3300031344 | Bacteria | 18663 |
| 109 | Ga0265313_10000085 | 3300031595 | Bacteria | 91819 |
| 110 | Ga0265314_10000002 | 3300031711 | Bacteria | 2092193 |
| 111 | Ga0265314_10000057 | 3300031711 | Bacteria | 167860 |
| 112 | Ga0265314_10141171 | 3300031711 | Bacteria | 1489 |
| 113 | Ga0265342_10010186 | 3300031712 | Bacteria | 6546 |
| 114 | Ga0316576_10015671 | 3300031727 | Bacteria | 5094 |
| 115 | Ga0316576_10037208 | 3300031727 | Bacteria | 3483 |
| 116 | Ga0316578_10034276 | 3300031728 | Bacteria | 2915 |
| 117 | Ga0307416_100098357 | 3300032002 | Bacteria | 2538 |
| 118 | Ga0316574_0017329 | 3300035398 | Bacteria | 4216 |
| 119 | Ga0316574_0033892 | 3300035398 | Bacteria | 3110 |
| 120 | Ga0373935_0038680 | 3300035692 | Bacteria | 2988 |
| 121 | Ga0373927_0023070 | 3300035695 | Bacteria | 4075 |
| 122 | Ga0373947_0013624 | 3300035725 | Bacteria | 4657 |
| 123 | Ga0373925_0000519 | 3300037068 | Bacteria | 38411 |
| 124 | Ga0373925_0269557 | 3300037068 | Bacteria | 1369 |
| 125 | Ga0395899_0053220 | 3300037312 | Bacteria | 2998 |
| 126 | Ga0395899_0138345 | 3300037312 | Bacteria | 1734 |
| 127 | Ga0395900_0001080 | 3300037418 | Bacteria | 34679 |
| 128 | Ga0395900_0003684 | 3300037418 | Bacteria | 16474 |
| 129 | Ga0395900_0065622 | 3300037418 | Bacteria | 3729 |
| 130 | Ga0395900_0155254 | 3300037418 | Bacteria | 2338 |
| 131 | Ga0395900_0552380 | 3300037418 | Bacteria | 1096 |
| 132 | Ga0395898_0001591 | 3300037466 | Bacteria | 30979 |
| 133 | Ga0395898_0008903 | 3300037466 | Bacteria | 10574 |
| 134 | Ga0395898_0035372 | 3300037466 | Bacteria | 4967 |
| 135 | Ga0395905_0044841 | 3300037471 | Bacteria | 4148 |
| 136 | Ga0395905_0344406 | 3300037471 | Bacteria | 1382 |
| 137 | Ga0436364_0815342 | 3300037853 | Bacteria | 2837 |
| 138 | Ga0395901_0041231 | 3300038443 | Bacteria | 4783 |
| 139 | Ga0395901_0046078 | 3300038443 | Bacteria | 4528 |
| 140 | Ga0395901_0084916 | 3300038443 | Bacteria | 3309 |
| 141 | Ga0395901_0096370 | 3300038443 | Bacteria | 3100 |
| 142 | Ga0395901_0305122 | 3300038443 | Bacteria | 1650 |
| 143 | Ga0400485_07927 | 3300038735 | Bacteria | 6321 |
| 144 | Ga0400486_07549 | 3300038742 | Bacteria | 6338 |
| 145 | Ga0400487_29566 | 3300039110 | Bacteria | 4169 |
| 146 | Ga0466969_0011895 | 3300044656 | Bacteria | 4601 |
| 147 | Ga0466972_0023338 | 3300044658 | Bacteria | 3077 |
| 148 | Ga0466966_0018534 | 3300044684 | Bacteria | 4590 |
| 149 | Ga0466966_0046472 | 3300044684 | Bacteria | 2771 |
| 150 | Ga0466961_0001084 | 3300044693 | Bacteria | 16778 |
| 151 | Ga0466961_0026062 | 3300044693 | Bacteria | 3759 |
| 152 | Ga0466963_0056756 | 3300044694 | Bacteria | 2606 |
| 153 | Ga0466964_0026738 | 3300044706 | Bacteria | 2261 |
| 154 | Ga0466964_0118408 | 3300044706 | Bacteria | 1190 |
| 155 | Ga0466964_0178362 | 3300044706 | Bacteria | 1006 |
| 156 | Ga0466971_0010218 | 3300044719 | Bacteria | 4101 |
| 157 | Ga0466970_0082106 | 3300044765 | Bacteria | 1743 |
| 158 | Ga0466957_0091866 | 3300044842 | Bacteria | 1903 |
| 159 | Ga0466957_0136931 | 3300044842 | Bacteria | 1575 |
| 160 | Ga0466957_0164343 | 3300044842 | Bacteria | 1443 |
| 161 | Ga0466960_0025673 | 3300044901 | Bacteria | 2668 |
| 162 | Ga0466959_0018129 | 3300045049 | Bacteria | 5165 |
| 163 | Ga0495638_0023558 | 3300046460 | Bacteria | 4025 |
| 164 | Ga0495582_0046137 | 3300046473 | Bacteria | 2400 |
| 165 | Ga0495662_0081822 | 3300046476 | Bacteria | 1571 |
| 166 | Ga0495664_0007033 | 3300046477 | Bacteria | 6232 |
| 167 | Ga0495611_0014611 | 3300046648 | Bacteria | 3357 |
| 168 | Ga0495599_0025538 | 3300046678 | Bacteria | 3699 |
| 169 | Ga0501034_0233236 | 3300049571 | Bacteria | 1789 |
| 170 | Ga0501041_0187890 | 3300049577 | Bacteria | 1294 |
| 171 | Ga0501081_0216336 | 3300049743 | Unclassified | 1393 |
| 172 | Ga0501044_0059461 | 3300049823 | Bacteria | 3915 |
| 173 | Ga0501044_0265409 | 3300049823 | Bacteria | 1654 |
| 174 | nmdc:mga08y16_335586_c1 | 3300050511 | Bacteria | 1554 |
| 175 | nmdc:mga0n895_178632_c1 | 3300050512 | Bacteria | 2154 |
| 176 | nmdc:mga0rr50_10986_c1 | 3300050513 | Bacteria | 5774 |
| 177 | Ga0500622_0000712 | 3300053156 | Bacteria | 29089 |
| 178 | Ga0466962_0031316 | 3300061719 | Bacteria | 2547 |
| 179 | Ga0530510_0159373 | 3300061734 | Bacteria | 1669 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013307 | Ga0157372_10289133 | Ga0157372_102891332 | 238 |
| 2 | 3300005336 | Ga0070680_100314536 | Ga0070680_1003145361 | 239 |
| 3 | 3300005458 | Ga0070681_10030464 | Ga0070681_100304642 | 239 |
| 4 | 3300005530 | Ga0070679_100400021 | Ga0070679_1004000211 | 239 |
| 5 | 3300005536 | Ga0070697_100078922 | Ga0070697_1000789222 | 239 |
| 6 | 3300013296 | Ga0157374_10067911 | Ga0157374_100679112 | 239 |
| 7 | 3300025912 | Ga0207707_10033574 | Ga0207707_100335741 | 239 |
| 8 | 3300025917 | Ga0207660_10267418 | Ga0207660_102674182 | 239 |
| 9 | 3300038735 | Ga0400485_07927 | Ga0400485_07927_5279_5998 | 239 |
| 10 | 3300038742 | Ga0400486_07549 | Ga0400486_07549_5289_6008 | 239 |
| 11 | 3300039110 | Ga0400487_29566 | Ga0400487_29566_311_1030 | 239 |
| 12 | 3300044693 | Ga0466961_0001084 | Ga0466961_0001084_12292_13062 | 240 |
| 13 | 3300013104 | Ga0157370_10034004 | Ga0157370_100340042 | 243 |
| 14 | 3300025949 | Ga0207667_10131767 | Ga0207667_101317672 | 243 |
| 15 | iso_pu_bacteria | 2811994880 | 2812362740 | 243 |
| 16 | 3300013306 | Ga0163162_10000260 | Ga0163162_1000026027 | 244 |
| 17 | 3300037418 | Ga0395900_0155254 | Ga0395900_0155254_933_1688 | 244 |
| 18 | 3300005467 | Ga0070706_100245800 | Ga0070706_1002458002 | 245 |
| 19 | 3300005468 | Ga0070707_100023394 | Ga0070707_1000233943 | 245 |
| 20 | 3300006871 | Ga0075434_100382171 | Ga0075434_1003821712 | 245 |
| 21 | 3300007076 | Ga0075435_100175111 | Ga0075435_1001751112 | 245 |
| 22 | 3300009094 | Ga0111539_10495952 | Ga0111539_104959522 | 245 |
| 23 | 3300009553 | Ga0105249_10125667 | Ga0105249_101256672 | 245 |
| 24 | 3300025915 | Ga0207693_10027177 | Ga0207693_100271774 | 245 |
| 25 | 3300025916 | Ga0207663_10082321 | Ga0207663_100823212 | 245 |
| 26 | 3300025922 | Ga0207646_10018134 | Ga0207646_100181343 | 245 |
| 27 | 3300026088 | Ga0207641_10043313 | Ga0207641_100433132 | 245 |
| 28 | 3300028381 | Ga0268264_10790812 | Ga0268264_107908122 | 245 |
| 29 | 3300050511 | nmdc:mga08y16_335586_c1 | nmdc:mga08y16_335586_c1_286_1023 | 245 |
| 30 | 3300050512 | nmdc:mga0n895_178632_c1 | nmdc:mga0n895_178632_c1_1356_2123 | 245 |
| 31 | 3300050513 | nmdc:mga0rr50_10986_c1 | nmdc:mga0rr50_10986_c1_4709_5476 | 245 |
| 32 | 3300025921 | Ga0207652_10066878 | Ga0207652_100668782 | 246 |
| 33 | 3300027296 | Ga0209389_1000413 | Ga0209389_100041322 | 247 |
| 34 | 3300027357 | Ga0209589_1013487 | Ga0209589_101348710 | 247 |
| 35 | 3300027361 | Ga0209489_100597 | Ga0209489_10059777 | 247 |
| 36 | 3300005536 | Ga0070697_100037118 | Ga0070697_1000371183 | 248 |
| 37 | 3300005331 | Ga0070670_100018540 | Ga0070670_1000185403 | 249 |
| 38 | 3300025925 | Ga0207650_10043794 | Ga0207650_100437941 | 249 |
| 39 | 3300044693 | Ga0466961_0026062 | Ga0466961_0026062_2046_2918 | 249 |
| 40 | 3300049823 | Ga0501044_0265409 | Ga0501044_0265409_104_967 | 249 |
| 41 | 3300005458 | Ga0070681_10482336 | Ga0070681_104823361 | 250 |
| 42 | 3300005614 | Ga0068856_100340668 | Ga0068856_1003406681 | 250 |
| 43 | 3300005616 | Ga0068852_100196512 | Ga0068852_1001965122 | 250 |
| 44 | 3300025919 | Ga0207657_10368733 | Ga0207657_103687332 | 250 |
| 45 | 3300026078 | Ga0207702_10273252 | Ga0207702_102732521 | 250 |
| 46 | 3300037312 | Ga0395899_0053220 | Ga0395899_0053220_1810_2814 | 250 |
| 47 | 3300037418 | Ga0395900_0065622 | Ga0395900_0065622_817_1821 | 250 |
| 48 | 3300037466 | Ga0395898_0035372 | Ga0395898_0035372_1821_2744 | 250 |
| 49 | 3300038443 | Ga0395901_0041231 | Ga0395901_0041231_1900_2904 | 250 |
| 50 | 3300038443 | Ga0395901_0096370 | Ga0395901_0096370_1555_2478 | 250 |
| 51 | 3300021320 | Ga0214544_1005903 | Ga0214544_10059034 | 251 |
| 52 | 3300037312 | Ga0395899_0138345 | Ga0395899_0138345_66_941 | 251 |
| 53 | 3300049823 | Ga0501044_0059461 | Ga0501044_0059461_2875_3855 | 251 |
| 54 | 3300017792 | Ga0163161_10009536 | Ga0163161_100095363 | 252 |
| 55 | 3300025297 | Ga0209758_1000631 | Ga0209758_100063122 | 252 |
| 56 | 3300046460 | Ga0495638_0023558 | Ga0495638_0023558_1000_1809 | 252 |
| 57 | 3300037418 | Ga0395900_0001080 | Ga0395900_0001080_3586_4458 | 253 |
| 58 | 3300037471 | Ga0395905_0344406 | Ga0395905_0344406_28_900 | 253 |
| 59 | 3300038443 | Ga0395901_0046078 | Ga0395901_0046078_39_911 | 253 |
| 60 | 3300061734 | Ga0530510_0159373 | Ga0530510_0159373_273_1079 | 253 |
| 61 | 3300031727 | Ga0316576_10037208 | Ga0316576_100372083 | 254 |
| 62 | 3300031728 | Ga0316578_10034276 | Ga0316578_100342763 | 254 |
| 63 | 3300035398 | Ga0316574_0017329 | Ga0316574_0017329_764_1579 | 254 |
| 64 | 3300049577 | Ga0501041_0187890 | Ga0501041_0187890_61_867 | 254 |
| 65 | 3300022467 | Ga0224712_10107409 | Ga0224712_101074091 | 256 |
| 66 | 3300025903 | Ga0207680_10012223 | Ga0207680_100122233 | 256 |
| 67 | 3300025925 | Ga0207650_10004839 | Ga0207650_100048396 | 256 |
| 68 | 3300013308 | Ga0157375_10636111 | Ga0157375_106361112 | 257 |
| 69 | 3300037418 | Ga0395900_0552380 | Ga0395900_0552380_167_940 | 257 |
| 70 | 3300046648 | Ga0495611_0014611 | Ga0495611_0014611_1296_2108 | 257 |
| 71 | 3300053156 | Ga0500622_0000712 | Ga0500622_0000712_21819_22631 | 257 |
| 72 | 3300044842 | Ga0466957_0164343 | Ga0466957_0164343_290_1102 | 258 |
| 73 | 3300049743 | Ga0501081_0216336 | Ga0501081_0216336_65_871 | 259 |
| 74 | 3300025914 | Ga0207671_10070273 | Ga0207671_100702731 | 264 |
| 75 | 3300037471 | Ga0395905_0044841 | Ga0395905_0044841_3207_4001 | 264 |
| 76 | 3300044684 | Ga0466966_0018534 | Ga0466966_0018534_912_1706 | 264 |
| 77 | 3300044842 | Ga0466957_0136931 | Ga0466957_0136931_626_1420 | 264 |
| 78 | 3300009545 | Ga0105237_10025192 | Ga0105237_100251924 | 265 |
| 79 | 3300037418 | Ga0395900_0003684 | Ga0395900_0003684_1629_2426 | 265 |
| 80 | 3300037466 | Ga0395898_0001591 | Ga0395898_0001591_15270_16067 | 265 |
| 81 | 3300038443 | Ga0395901_0084916 | Ga0395901_0084916_2472_3269 | 265 |
| 82 | iso_pu_bacteria | 2515154123 | 2515686960 | 265 |
| 83 | iso_pu_bacteria | 2842324504 | 2842331961 | 265 |
| 84 | iso_pu_bacteria | 2842348783 | 2842353807 | 265 |
| 85 | 3300006358 | Ga0068871_100038905 | Ga0068871_1000389054 | 267 |
| 86 | 3300013306 | Ga0163162_10000415 | Ga0163162_100004153 | 267 |
| 87 | 3300014969 | Ga0157376_10005957 | Ga0157376_100059575 | 267 |
| 88 | 3300014969 | Ga0157376_10194570 | Ga0157376_101945702 | 267 |
| 89 | 3300044656 | Ga0466969_0011895 | Ga0466969_0011895_3226_4038 | 268 |
| 90 | 3300044684 | Ga0466966_0046472 | Ga0466966_0046472_1655_2467 | 268 |
| 91 | 3300026067 | Ga0207678_10294249 | Ga0207678_102942492 | 270 |
| 92 | 3300049571 | Ga0501034_0233236 | Ga0501034_0233236_389_1330 | 271 |
| 93 | 3300035692 | Ga0373935_0038680 | Ga0373935_0038680_1532_2350 | 272 |
| 94 | 3300035695 | Ga0373927_0023070 | Ga0373927_0023070_101_919 | 272 |
| 95 | 3300035725 | Ga0373947_0013624 | Ga0373947_0013624_1346_2164 | 272 |
| 96 | 3300037068 | Ga0373925_0000519 | Ga0373925_0000519_6349_7167 | 272 |
| 97 | 3300044706 | Ga0466964_0178362 | Ga0466964_0178362_10_828 | 272 |
| 98 | 3300046476 | Ga0495662_0081822 | Ga0495662_0081822_304_1122 | 272 |
| 99 | 3300006195 | Ga0075366_10119879 | Ga0075366_101198792 | 275 |
| 100 | 3300046473 | Ga0495582_0046137 | Ga0495582_0046137_870_1727 | 276 |
| 101 | 3300032002 | Ga0307416_100098357 | Ga0307416_1000983572 | 277 |
| 102 | 3300005468 | Ga0070707_100204727 | Ga0070707_1002047272 | 278 |
| 103 | 3300025910 | Ga0207684_10086413 | Ga0207684_100864132 | 278 |
| 104 | 3300005547 | Ga0070693_100100648 | Ga0070693_1001006482 | 279 |
| 105 | 3300025936 | Ga0207670_10000002 | Ga0207670_10000002432 | 279 |
| 106 | 3300028573 | Ga0265334_10048582 | Ga0265334_100485822 | 279 |
| 107 | 3300028577 | Ga0265318_10000085 | Ga0265318_1000008512 | 279 |
| 108 | 3300031235 | Ga0265330_10002861 | Ga0265330_100028616 | 279 |
| 109 | 3300031238 | Ga0265332_10002067 | Ga0265332_100020678 | 279 |
| 110 | 3300031239 | Ga0265328_10002348 | Ga0265328_100023487 | 279 |
| 111 | 3300031240 | Ga0265320_10000025 | Ga0265320_10000025129 | 279 |
| 112 | 3300031242 | Ga0265329_10008826 | Ga0265329_100088262 | 279 |
| 113 | 3300031249 | Ga0265339_10048902 | Ga0265339_100489023 | 279 |
| 114 | 3300031250 | Ga0265331_10000063 | Ga0265331_10000063128 | 279 |
| 115 | 3300031344 | Ga0265316_10001339 | Ga0265316_1000133922 | 279 |
| 116 | 3300031344 | Ga0265316_10002592 | Ga0265316_1000259210 | 279 |
| 117 | 3300031595 | Ga0265313_10000085 | Ga0265313_1000008566 | 279 |
| 118 | 3300031711 | Ga0265314_10000002 | Ga0265314_10000002237 | 279 |
| 119 | 3300031711 | Ga0265314_10000057 | Ga0265314_1000005711 | 279 |
| 120 | 3300031712 | Ga0265342_10010186 | Ga0265342_100101862 | 279 |
| 121 | 3300037068 | Ga0373925_0269557 | Ga0373925_0269557_74_934 | 279 |
| 122 | 3300031727 | Ga0316576_10015671 | Ga0316576_100156713 | 281 |
| 123 | 3300035398 | Ga0316574_0033892 | Ga0316574_0033892_1959_2804 | 281 |
| 124 | 3300005468 | Ga0070707_100584620 | Ga0070707_1005846201 | 283 |
| 125 | 3300005471 | Ga0070698_100247302 | Ga0070698_1002473022 | 283 |
| 126 | 3300028800 | Ga0265338_10019508 | Ga0265338_100195083 | 283 |
| 127 | 3300031711 | Ga0265314_10141171 | Ga0265314_101411711 | 283 |
| 128 | 3300005336 | Ga0070680_100068125 | Ga0070680_1000681253 | 284 |
| 129 | 3300005337 | Ga0070682_100029445 | Ga0070682_1000294453 | 284 |
| 130 | 3300009093 | Ga0105240_10214466 | Ga0105240_102144661 | 284 |
| 131 | 3300013307 | Ga0157372_10206815 | Ga0157372_102068153 | 284 |
| 132 | iso_pu_bacteria | 2922361189 | 2922362715 | 284 |
| 133 | iso_pu_bacteria | 2507262055 | 2507510385 | 286 |
| 134 | iso_pu_bacteria | 2513237139 | 2513877005 | 286 |
| 135 | iso_pu_bacteria | 2791355196 | 2793065104 | 286 |
| 136 | iso_pu_bacteria | 2842038055 | 2842038515 | 286 |
| 137 | iso_pu_bacteria | 2842045827 | 2842048540 | 286 |
| 138 | iso_pu_bacteria | 2842454564 | 2842459970 | 286 |
| 139 | iso_pu_bacteria | 2874645413 | 2874646029 | 286 |
| 140 | iso_pu_bacteria | 2881665667 | 2881670036 | 286 |
| 141 | iso_pu_bacteria | 2935769743 | 2935775975 | 286 |
| 142 | iso_pu_bacteria | 2935785616 | 2935788635 | 286 |
| 143 | iso_pu_bacteria | 2935785616 | 2935791621 | 286 |
| 144 | iso_pu_bacteria | 2935793552 | 2935795739 | 286 |
| 145 | iso_pu_bacteria | 2935793552 | 2935799933 | 286 |
| 146 | iso_pu_bacteria | 2935975950 | 2935984035 | 286 |
| 147 | iso_pu_bacteria | 8016603502 | 8016608164 | 286 |
| 148 | iso_pu_bacteria | 8016613128 | 8016616713 | 286 |
| 149 | iso_pu_bacteria | 8016622563 | 8016629837 | 286 |
| 150 | iso_pu_bacteria | 8019668869 | 8019675943 | 286 |
| 151 | 3300025253 | Ga0209677_101717 | Ga0209677_1017176 | 288 |
| 152 | 3300025297 | Ga0209758_1001287 | Ga0209758_100128717 | 289 |
| 153 | 3300037466 | Ga0395898_0008903 | Ga0395898_0008903_3596_4465 | 289 |
| 154 | 3300038443 | Ga0395901_0305122 | Ga0395901_0305122_507_1376 | 289 |
| 155 | 3300003752 | Ga0055539_1002216 | Ga0055539_10022163 | 290 |
| 156 | 3300005455 | Ga0070663_100004678 | Ga0070663_1000046785 | 290 |
| 157 | 3300005458 | Ga0070681_10002738 | Ga0070681_100027384 | 290 |
| 158 | 3300005530 | Ga0070679_100066754 | Ga0070679_1000667544 | 290 |
| 159 | 3300005530 | Ga0070679_100437557 | Ga0070679_1004375572 | 290 |
| 160 | 3300005535 | Ga0070684_100126149 | Ga0070684_1001261492 | 290 |
| 161 | 3300005539 | Ga0068853_100041388 | Ga0068853_1000413883 | 290 |
| 162 | 3300005563 | Ga0068855_100005260 | Ga0068855_1000052603 | 290 |
| 163 | 3300005563 | Ga0068855_100022248 | Ga0068855_1000222487 | 290 |
| 164 | 3300005614 | Ga0068856_100072660 | Ga0068856_1000726603 | 290 |
| 165 | 3300005614 | Ga0068856_100106005 | Ga0068856_1001060053 | 290 |
| 166 | 3300006237 | Ga0097621_100170934 | Ga0097621_1001709342 | 290 |
| 167 | 3300009093 | Ga0105240_10003169 | Ga0105240_100031697 | 290 |
| 168 | 3300009174 | Ga0105241_10023129 | Ga0105241_100231293 | 290 |
| 169 | 3300009545 | Ga0105237_10759633 | Ga0105237_107596331 | 290 |
| 170 | 3300009551 | Ga0105238_10212654 | Ga0105238_102126541 | 290 |
| 171 | 3300009551 | Ga0105238_10327947 | Ga0105238_103279472 | 290 |
| 172 | 3300010375 | Ga0105239_10441869 | Ga0105239_104418692 | 290 |
| 173 | 3300013104 | Ga0157370_10037898 | Ga0157370_100378983 | 290 |
| 174 | 3300013104 | Ga0157370_10070467 | Ga0157370_100704672 | 290 |
| 175 | 3300013105 | Ga0157369_10006685 | Ga0157369_1000668516 | 290 |
| 176 | 3300013307 | Ga0157372_10045918 | Ga0157372_100459182 | 290 |
| 177 | 3300025230 | Ga0209563_101704 | Ga0209563_1017045 | 290 |
| 178 | 3300025253 | Ga0209677_100807 | Ga0209677_10080710 | 290 |
| 179 | 3300025909 | Ga0207705_10144101 | Ga0207705_101441012 | 290 |
| 180 | 3300025911 | Ga0207654_10057442 | Ga0207654_100574423 | 290 |
| 181 | 3300025912 | Ga0207707_10000134 | Ga0207707_1000013457 | 290 |
| 182 | 3300025913 | Ga0207695_10032292 | Ga0207695_100322924 | 290 |
| 183 | 3300025921 | Ga0207652_10004279 | Ga0207652_100042794 | 290 |
| 184 | 3300025921 | Ga0207652_10202951 | Ga0207652_102029512 | 290 |
| 185 | 3300025949 | Ga0207667_10057021 | Ga0207667_100570215 | 290 |
| 186 | 3300026041 | Ga0207639_10036154 | Ga0207639_100361543 | 290 |
| 187 | 3300026067 | Ga0207678_10011547 | Ga0207678_100115475 | 290 |
| 188 | 3300026067 | Ga0207678_10060692 | Ga0207678_100606921 | 290 |
| 189 | 3300026078 | Ga0207702_10031969 | Ga0207702_100319693 | 290 |
| 190 | 3300037853 | Ga0436364_0815342 | Ga0436364_0815342_1631_2518 | 290 |
| 191 | 3300044658 | Ga0466972_0023338 | Ga0466972_0023338_117_989 | 290 |
| 192 | 3300044694 | Ga0466963_0056756 | Ga0466963_0056756_373_1260 | 290 |
| 193 | 3300044706 | Ga0466964_0026738 | Ga0466964_0026738_1162_2034 | 290 |
| 194 | 3300044706 | Ga0466964_0118408 | Ga0466964_0118408_55_927 | 290 |
| 195 | 3300044719 | Ga0466971_0010218 | Ga0466971_0010218_2127_2999 | 290 |
| 196 | 3300044765 | Ga0466970_0082106 | Ga0466970_0082106_416_1288 | 290 |
| 197 | 3300044842 | Ga0466957_0091866 | Ga0466957_0091866_897_1769 | 290 |
| 198 | 3300044901 | Ga0466960_0025673 | Ga0466960_0025673_210_1082 | 290 |
| 199 | 3300045049 | Ga0466959_0018129 | Ga0466959_0018129_3858_4730 | 290 |
| 200 | 3300046477 | Ga0495664_0007033 | Ga0495664_0007033_4922_5794 | 290 |
| 201 | 3300046678 | Ga0495599_0025538 | Ga0495599_0025538_691_1563 | 290 |
| 202 | 3300061719 | Ga0466962_0031316 | Ga0466962_0031316_1378_2250 | 290 |
| 203 | iso_pu_bacteria | 2824696289 | 2824698302 | 290 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4rzh-assembly1.cif.gz_B | crystal structure of fabg from synechocystis sp. pcc 6803 | 0.9848 | 31 | 280 |
| 4jro-assembly1.cif.gz_B | crystal structure of 3-oxoacyl-[acyl-carrier protein]reductase (fabg)from listeria monocytogenes in complex with nadp+ | 0.9819 | 27 | 280 |
| 4ijk-assembly1.cif.gz_B | crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from helicobacter pylori 26695 | 0.9773 | 31 | 280 |
| 8jfa-assembly2.cif.gz_F-2 | crystal structure of 3-oxoacyl-acp reductase fabg in complex with nadph from helicobacter pylori | 0.9769 | 30 | 280 |
| 8jfa-assembly1.cif.gz_C | crystal structure of 3-oxoacyl-acp reductase fabg in complex with nadph from helicobacter pylori | 0.9767 | 30 | 280 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_B7FAC8_69_312_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9753 | 31 | 280 | 3.40.50.720 |
| 6ixmB00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9752 | 28 | 283 | 3.40.50.720 |
| 4ni5A00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.974 | 28 | 283 | 3.40.50.720 |
| 4hsyA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.973 | 28 | 282 | 3.40.50.720 |
| 4urfA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9695 | 27 | 283 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A074LKV4-F1-model_v4 | Oxidoreductase | 0.9884 | 28 | 109 |
GO:0016614
|
| AF-A0A7I8MRR1-F1-model_v4 | Glucose 1-dehydrogenase (EC) (EC 1.1.1.47) | 0.986 | 103 | 290 |
GO:0047936
|
| AF-A0A562VFE8-F1-model_v4 | Short subunit dehydrogenase | 0.9851 | 28 | 151 |
|
| AF-A0A2V8XGZ2-F1-model_v4 | Oxidoreductase | 0.9841 | 28 | 148 |
|
| AF-A0A415DW66-F1-model_v4 | SDR family NAD(P)-dependent oxidoreductase | 0.9825 | 27 | 280 |
GO:0008202
GO:0016616 |
Predicted Structure (AlphaFold2)
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