F311016
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 203 | 131 | 406 | 314 |
Family's Representative Sequence
| Representative Sequence | 3300005618|Ga0068864_100084186|Ga0068864_1000841862 |
| Length | 368 |
| Sequence | MITPLRGGEISIPDLATTDPDYFTRAQVGATRDVLALVPATILLEGRDRLIRMPLAIQADDVRAAAERIRPLARKTPVLTSAGFDTEAGTRVFFKCENLQRGGAFKIRGASNLVLSLARELLCRGVVAYSSGNHAQATAIAAKYVGVPSTIVMPEDAPQSKMEATRAHGARIITYNRFKDSREAIAQSILKETGATLVPPFDHPMIMAGQGTAAMELLDETGPLDALITPVGGGGLLAGCATIAKAQHPGIRVFGAEPESANDTFLSMLAGERISVHPDTIADGLRAPKPGELTFPVMQQLVERILLVSEDEIRAAVKFVLLRLKILMEPSGAVPVAAVLFRKLPPGIQSVGVIISGGNVDFADLAKM |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 17 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 18 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 19 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 21 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 34 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 35 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 50 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 51 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 52 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 53 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 54 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 55 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 56 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 57 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 58 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 59 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 60 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 61 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 62 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 63 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 64 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 65 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 66 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 67 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 68 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 69 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 70 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 71 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 72 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 73 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 74 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 75 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 76 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 77 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 113 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 114 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 115 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 116 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 118 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 119 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 120 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 2643221559 | Lysobacter sp. Root559 | Isolate | Unclassified |
| 124 | 2643221573 | Lysobacter sp. Root604 | Isolate | Unclassified |
| 125 | 2643221586 | Lysobacter sp. Root667 | Isolate | Unclassified |
| 126 | 2643221612 | Lysobacter sp. Root76 | Isolate | Unclassified |
| 127 | 2643221720 | Lysobacter sp. Root916 | Isolate | Unclassified |
| 128 | 2643221727 | Lysobacter sp. Root96 | Isolate | Unclassified |
| 129 | 2643221728 | Lysobacter sp. Root983 | Isolate | Unclassified |
| 130 | 2841864319 | Rhizobium leguminosarum SEMIA 4052 | Isolate | Nodule |
| 131 | 8005626139 | Rhizobium phaseoli Y18 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.57 |
| Metatranscriptomes | 0 |
| Isolates | 4.43 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.48 |
| Nodule | 0.99 |
| Rhizoplane | 4.43 |
| Rhizosphere | 87.19 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 8.37 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0068864_100084186 | 3300005618 | Bacteria | 2794 |
| 2 | JGI25151J46595_10008569 | 3300003187 | Bacteria | 4903 |
| 3 | Ga0055531_10020686 | 3300003794 | Bacteria | 2590 |
| 4 | Ga0070683_100000026 | 3300005329 | Bacteria | 172308 |
| 5 | Ga0070683_100024331 | 3300005329 | Bacteria | 5423 |
| 6 | Ga0070680_100281104 | 3300005336 | Unclassified | 1410 |
| 7 | Ga0070671_100040198 | 3300005355 | Bacteria | 3884 |
| 8 | Ga0070671_100134000 | 3300005355 | Bacteria | 2088 |
| 9 | Ga0070714_100077939 | 3300005435 | Unclassified | 2879 |
| 10 | Ga0070714_100099867 | 3300005435 | Unclassified | 2555 |
| 11 | Ga0070708_100004463 | 3300005445 | Bacteria | 11006 |
| 12 | Ga0070708_100212518 | 3300005445 | Unclassified | 1813 |
| 13 | Ga0070681_10008429 | 3300005458 | Bacteria | 10098 |
| 14 | Ga0070699_100078248 | 3300005518 | Bacteria | 2880 |
| 15 | Ga0070679_100165375 | 3300005530 | Unclassified | 2186 |
| 16 | Ga0070684_100000012 | 3300005535 | Bacteria | 167850 |
| 17 | Ga0070697_100140738 | 3300005536 | Bacteria | 2029 |
| 18 | Ga0070695_100155857 | 3300005545 | Bacteria | 1598 |
| 19 | Ga0070696_100005119 | 3300005546 | Bacteria | 8760 |
| 20 | Ga0068855_100204863 | 3300005563 | Bacteria | 2220 |
| 21 | Ga0068852_100185275 | 3300005616 | Bacteria | 1960 |
| 22 | Ga0068863_100019528 | 3300005841 | Bacteria | 6483 |
| 23 | Ga0070717_10149500 | 3300006028 | Bacteria | 2020 |
| 24 | Ga0075435_100322089 | 3300007076 | Bacteria | 1323 |
| 25 | Ga0105240_10092997 | 3300009093 | Bacteria | 3681 |
| 26 | Ga0105240_10100851 | 3300009093 | Bacteria | 3513 |
| 27 | Ga0105245_10480120 | 3300009098 | Bacteria | 1256 |
| 28 | Ga0114129_10110445 | 3300009147 | Bacteria | 3795 |
| 29 | Ga0105243_10531691 | 3300009148 | Bacteria | 1120 |
| 30 | Ga0105248_10353757 | 3300009177 | Bacteria | 1654 |
| 31 | Ga0105248_10359767 | 3300009177 | Unclassified | 1638 |
| 32 | Ga0105248_10442155 | 3300009177 | Bacteria | 1465 |
| 33 | Ga0105239_10758543 | 3300010375 | Unclassified | 1111 |
| 34 | Ga0157369_10013754 | 3300013105 | Bacteria | 9148 |
| 35 | Ga0157369_10269786 | 3300013105 | Bacteria | 1773 |
| 36 | Ga0157374_10273527 | 3300013296 | Unclassified | 1666 |
| 37 | Ga0157372_10125382 | 3300013307 | Bacteria | 2952 |
| 38 | Ga0157375_10094702 | 3300013308 | Bacteria | 3055 |
| 39 | Ga0163163_10002777 | 3300014325 | Bacteria | 14787 |
| 40 | Ga0163163_10128246 | 3300014325 | Bacteria | 2576 |
| 41 | Ga0163163_10131144 | 3300014325 | Bacteria | 2547 |
| 42 | Ga0157376_10122788 | 3300014969 | Bacteria | 2305 |
| 43 | Ga0157376_10191674 | 3300014969 | Unclassified | 1875 |
| 44 | Ga0157376_10318752 | 3300014969 | Bacteria | 1477 |
| 45 | Ga0213872_10000246 | 3300021361 | Bacteria | 47879 |
| 46 | Ga0213875_10025694 | 3300021388 | Bacteria | 2804 |
| 47 | Ga0209025_1000881 | 3300025294 | Bacteria | 46981 |
| 48 | Ga0207707_10065532 | 3300025912 | Bacteria | 3164 |
| 49 | Ga0207695_10315452 | 3300025913 | Bacteria | 1453 |
| 50 | Ga0207671_10020010 | 3300025914 | Bacteria | 5105 |
| 51 | Ga0207663_10178541 | 3300025916 | Bacteria | 1514 |
| 52 | Ga0207660_10008034 | 3300025917 | Bacteria | 6823 |
| 53 | Ga0207660_10108412 | 3300025917 | Bacteria | 2086 |
| 54 | Ga0207700_10014078 | 3300025928 | Bacteria | 5229 |
| 55 | Ga0207664_10108624 | 3300025929 | Unclassified | 2304 |
| 56 | Ga0207644_10041722 | 3300025931 | Bacteria | 3248 |
| 57 | Ga0207711_10100311 | 3300025941 | Bacteria | 2561 |
| 58 | Ga0207711_10240747 | 3300025941 | Unclassified | 1659 |
| 59 | Ga0207711_10396383 | 3300025941 | Bacteria | 1282 |
| 60 | Ga0207661_10000003 | 3300025944 | Bacteria | 611941 |
| 61 | Ga0207667_10051334 | 3300025949 | Bacteria | 4349 |
| 62 | Ga0207641_10040161 | 3300026088 | Bacteria | 3916 |
| 63 | Ga0207683_10095369 | 3300026121 | Bacteria | 2652 |
| 64 | Ga0207683_10388509 | 3300026121 | Bacteria | 1283 |
| 65 | Ga0265323_10003689 | 3300028653 | Bacteria | 6704 |
| 66 | Ga0265316_10002881 | 3300031344 | Bacteria | 17603 |
| 67 | Ga0265316_10033821 | 3300031344 | Bacteria | 4159 |
| 68 | Ga0265316_10223853 | 3300031344 | Bacteria | 1387 |
| 69 | Ga0265316_10273418 | 3300031344 | Bacteria | 1236 |
| 70 | Ga0307414_10135341 | 3300032004 | Bacteria | 1920 |
| 71 | Ga0373926_0003690 | 3300035083 | Bacteria | 4979 |
| 72 | Ga0373944_0025978 | 3300035089 | Bacteria | 1727 |
| 73 | Ga0373923_0044130 | 3300035111 | Unclassified | 1847 |
| 74 | Ga0373945_0014696 | 3300035116 | Bacteria | 2627 |
| 75 | Ga0373943_0002297 | 3300035170 | Bacteria | 8685 |
| 76 | Ga0373943_0046024 | 3300035170 | Bacteria | 2128 |
| 77 | Ga0373946_0004214 | 3300035171 | Bacteria | 5129 |
| 78 | Ga0316574_0235966 | 3300035398 | Bacteria | 1170 |
| 79 | Ga0373935_0021212 | 3300035692 | Bacteria | 3976 |
| 80 | Ga0373935_0093335 | 3300035692 | Bacteria | 1973 |
| 81 | Ga0373927_0009515 | 3300035695 | Bacteria | 6516 |
| 82 | Ga0373947_0001874 | 3300035725 | Bacteria | 12830 |
| 83 | Ga0373947_0005241 | 3300035725 | Bacteria | 7577 |
| 84 | Ga0373937_0018242 | 3300036401 | Bacteria | 6263 |
| 85 | Ga0373937_0086126 | 3300036401 | Bacteria | 2908 |
| 86 | Ga0373937_0234090 | 3300036401 | Bacteria | 1730 |
| 87 | Ga0373925_0000905 | 3300037068 | Bacteria | 27102 |
| 88 | Ga0373925_0001868 | 3300037068 | Bacteria | 17520 |
| 89 | Ga0373925_0375148 | 3300037068 | Unclassified | 1158 |
| 90 | Ga0436364_0414813 | 3300037853 | Bacteria | 101115 |
| 91 | Ga0436364_0664491 | 3300037853 | Bacteria | 5504 |
| 92 | Ga0395901_0201009 | 3300038443 | Bacteria | 2089 |
| 93 | Ga0436365_0049533 | 3300039437 | Unclassified | 2552 |
| 94 | Ga0436365_0433233 | 3300039437 | Unclassified | 4441 |
| 95 | Ga0436361_0972882 | 3300039447 | Bacteria | 108107 |
| 96 | Ga0439436_0048349 | 3300041404 | Bacteria | 1206 |
| 97 | Ga0439439_0005435 | 3300041406 | Bacteria | 2909 |
| 98 | Ga0439445_0010743 | 3300042004 | Bacteria | 2173 |
| 99 | Ga0439462_0003864 | 3300042015 | Bacteria | 3615 |
| 100 | Ga0466963_0020269 | 3300044694 | Bacteria | 4181 |
| 101 | Ga0466963_0098672 | 3300044694 | Bacteria | 1997 |
| 102 | Ga0466957_0035005 | 3300044842 | Bacteria | 3013 |
| 103 | Ga0451576_0116609 | 3300045051 | Bacteria | 2780 |
| 104 | Ga0466958_0010134 | 3300045836 | Bacteria | 5269 |
| 105 | Ga0466958_0013654 | 3300045836 | Bacteria | 4629 |
| 106 | Ga0466967_0465810 | 3300045976 | Unclassified | 1237 |
| 107 | Ga0495592_0001094 | 3300046454 | Bacteria | 18822 |
| 108 | Ga0495629_0000349 | 3300046459 | Bacteria | 39311 |
| 109 | Ga0495629_0127338 | 3300046459 | Bacteria | 1774 |
| 110 | Ga0495641_0001534 | 3300046461 | Bacteria | 19606 |
| 111 | Ga0495651_0015287 | 3300046462 | Bacteria | 5934 |
| 112 | Ga0495653_0020462 | 3300046463 | Bacteria | 5365 |
| 113 | Ga0495580_0007983 | 3300046472 | Bacteria | 8459 |
| 114 | Ga0495580_0017359 | 3300046472 | Bacteria | 5384 |
| 115 | Ga0495580_0046078 | 3300046472 | Bacteria | 3096 |
| 116 | Ga0495580_0172668 | 3300046472 | Bacteria | 1494 |
| 117 | Ga0495582_0000391 | 3300046473 | Bacteria | 23825 |
| 118 | Ga0495582_0277948 | 3300046473 | Bacteria | 961 |
| 119 | Ga0495639_0000300 | 3300046475 | Bacteria | 24087 |
| 120 | Ga0495662_0000893 | 3300046476 | Bacteria | 14572 |
| 121 | Ga0495662_0021093 | 3300046476 | Bacteria | 3151 |
| 122 | Ga0495662_0021181 | 3300046476 | Bacteria | 3144 |
| 123 | Ga0495664_0037359 | 3300046477 | Bacteria | 2866 |
| 124 | Ga0495664_0066125 | 3300046477 | Bacteria | 2156 |
| 125 | Ga0495608_0119789 | 3300046511 | Bacteria | 1688 |
| 126 | Ga0495608_0143864 | 3300046511 | Bacteria | 1521 |
| 127 | Ga0495618_0081088 | 3300046514 | Bacteria | 2071 |
| 128 | Ga0495666_0033194 | 3300046526 | Bacteria | 2523 |
| 129 | Ga0495652_0163316 | 3300046529 | Bacteria | 1726 |
| 130 | Ga0495665_0020332 | 3300046531 | Bacteria | 3566 |
| 131 | Ga0495640_0010942 | 3300046533 | Bacteria | 6991 |
| 132 | Ga0495640_0064000 | 3300046533 | Bacteria | 2488 |
| 133 | Ga0495640_0068692 | 3300046533 | Bacteria | 2384 |
| 134 | Ga0495587_0025750 | 3300046536 | Bacteria | 3594 |
| 135 | Ga0495587_0218116 | 3300046536 | Bacteria | 1076 |
| 136 | Ga0495645_0030963 | 3300046543 | Bacteria | 3897 |
| 137 | Ga0495645_0054120 | 3300046543 | Bacteria | 2916 |
| 138 | Ga0495645_0133146 | 3300046543 | Bacteria | 1740 |
| 139 | Ga0495645_0223197 | 3300046543 | Bacteria | 1266 |
| 140 | Ga0495667_0018197 | 3300046559 | Bacteria | 4747 |
| 141 | Ga0495667_0020940 | 3300046559 | Bacteria | 4412 |
| 142 | Ga0495667_0031210 | 3300046559 | Bacteria | 3577 |
| 143 | Ga0495667_0236027 | 3300046559 | Bacteria | 1165 |
| 144 | Ga0495634_0030073 | 3300046642 | Bacteria | 3754 |
| 145 | Ga0495634_0077009 | 3300046642 | Bacteria | 2188 |
| 146 | Ga0495635_0011339 | 3300046663 | Bacteria | 6252 |
| 147 | Ga0495635_0041006 | 3300046663 | Bacteria | 3199 |
| 148 | Ga0495599_0029361 | 3300046678 | Bacteria | 3447 |
| 149 | Ga0495599_0092686 | 3300046678 | Bacteria | 1885 |
| 150 | Ga0495623_0026042 | 3300046679 | Bacteria | 3767 |
| 151 | Ga0495623_0062998 | 3300046679 | Bacteria | 2323 |
| 152 | Ga0495623_0190292 | 3300046679 | Bacteria | 1186 |
| 153 | Ga0495613_0003775 | 3300046689 | Bacteria | 11352 |
| 154 | Ga0495613_0242948 | 3300046689 | Bacteria | 1258 |
| 155 | Ga0495624_0005751 | 3300046690 | Bacteria | 8888 |
| 156 | Ga0495600_0075723 | 3300046809 | Bacteria | 2197 |
| 157 | Ga0495581_0002441 | 3300047315 | Bacteria | 10506 |
| 158 | Ga0495604_0044831 | 3300047317 | Bacteria | 3453 |
| 159 | Ga0495604_0053777 | 3300047317 | Bacteria | 3110 |
| 160 | Ga0495604_0253292 | 3300047317 | Bacteria | 1199 |
| 161 | Ga0495674_0023584 | 3300047319 | Bacteria | 5669 |
| 162 | Ga0495674_0026975 | 3300047319 | Bacteria | 5253 |
| 163 | Ga0495674_0037518 | 3300047319 | Bacteria | 4355 |
| 164 | Ga0495674_0067589 | 3300047319 | Bacteria | 3096 |
| 165 | Ga0495674_0069890 | 3300047319 | Bacteria | 3035 |
| 166 | Ga0495674_0108091 | 3300047319 | Bacteria | 2360 |
| 167 | Ga0495674_0215998 | 3300047319 | Bacteria | 1587 |
| 168 | Ga0495680_0063242 | 3300047322 | Bacteria | 2842 |
| 169 | Ga0495680_0093441 | 3300047322 | Bacteria | 2251 |
| 170 | Ga0495675_0161367 | 3300047444 | Bacteria | 1380 |
| 171 | Ga0495684_0002840 | 3300047471 | Bacteria | 13643 |
| 172 | Ga0495684_0008469 | 3300047471 | Bacteria | 7962 |
| 173 | Ga0495684_0015321 | 3300047471 | Bacteria | 5903 |
| 174 | Ga0495684_0027277 | 3300047471 | Bacteria | 4385 |
| 175 | Ga0495684_0258549 | 3300047471 | Bacteria | 1264 |
| 176 | Ga0495593_0030858 | 3300047673 | Bacteria | 2930 |
| 177 | Ga0495602_0102506 | 3300048088 | Bacteria | 2345 |
| 178 | Ga0495602_0162062 | 3300048088 | Bacteria | 1745 |
| 179 | Ga0495602_0178654 | 3300048088 | Bacteria | 1640 |
| 180 | Ga0495602_0202336 | 3300048088 | Bacteria | 1514 |
| 181 | Ga0496101_0043605 | 3300048904 | Bacteria | 3206 |
| 182 | Ga0496104_0042956 | 3300048907 | Bacteria | 4244 |
| 183 | Ga0496105_0007992 | 3300048908 | Bacteria | 8223 |
| 184 | Ga0496107_0214151 | 3300048910 | Bacteria | 1433 |
| 185 | Ga0496108_0049863 | 3300048911 | Bacteria | 3502 |
| 186 | Ga0496109_0018076 | 3300048912 | Bacteria | 6190 |
| 187 | Ga0496110_0098604 | 3300048913 | Bacteria | 2619 |
| 188 | Ga0496111_0034047 | 3300048914 | Bacteria | 3636 |
| 189 | Ga0496115_0244307 | 3300048918 | Unclassified | 1479 |
| 190 | nmdc:mga05p37_113438_c1 | 3300050507 | Bacteria | 3332 |
| 191 | nmdc:mga05p37_237259_c1 | 3300050507 | Bacteria | 2194 |
| 192 | Ga0495612_0077263 | 3300053078 | Bacteria | 1395 |
| 193 | Ga0495619_0002665 | 3300053085 | Bacteria | 11674 |
| 194 | Ga0495619_0036950 | 3300053085 | Bacteria | 3181 |
| 195 | 2643817890 | 2643221559 | Bacteria | 4424915 |
| 196 | 2643880055 | 2643221573 | Bacteria | 4784121 |
| 197 | 2643937548 | 2643221586 | Bacteria | 4446529 |
| 198 | 2644078462 | 2643221612 | Bacteria | 4361984 |
| 199 | 2644662393 | 2643221720 | Bacteria | 4694283 |
| 200 | 2644693239 | 2643221727 | Bacteria | 4415595 |
| 201 | 2644698715 | 2643221728 | Bacteria | 4797149 |
| 202 | 2841866445 | 2841864319 | Bacteria | 6742987 |
| 203 | 8005629706 | 8005626139 | Bacteria | 6534237 |
| 204 | Ga0068864_100084186 | |||
| 205 | JGI25151J46595_10008569 | |||
| 206 | Ga0055531_10020686 | |||
| 207 | Ga0070683_100000026 | |||
| 208 | Ga0070683_100024331 | |||
| 209 | Ga0070680_100281104 | |||
| 210 | Ga0070671_100040198 | |||
| 211 | Ga0070671_100134000 | |||
| 212 | Ga0070714_100077939 | |||
| 213 | Ga0070714_100099867 | |||
| 214 | Ga0070708_100004463 | |||
| 215 | Ga0070708_100212518 | |||
| 216 | Ga0070681_10008429 | |||
| 217 | Ga0070699_100078248 | |||
| 218 | Ga0070679_100165375 | |||
| 219 | Ga0070684_100000012 | |||
| 220 | Ga0070697_100140738 | |||
| 221 | Ga0070695_100155857 | |||
| 222 | Ga0070696_100005119 | |||
| 223 | Ga0068855_100204863 | |||
| 224 | Ga0068852_100185275 | |||
| 225 | Ga0068863_100019528 | |||
| 226 | Ga0070717_10149500 | |||
| 227 | Ga0075435_100322089 | |||
| 228 | Ga0105240_10092997 | |||
| 229 | Ga0105240_10100851 | |||
| 230 | Ga0105245_10480120 | |||
| 231 | Ga0114129_10110445 | |||
| 232 | Ga0105243_10531691 | |||
| 233 | Ga0105248_10353757 | |||
| 234 | Ga0105248_10359767 | |||
| 235 | Ga0105248_10442155 | |||
| 236 | Ga0105239_10758543 | |||
| 237 | Ga0157369_10013754 | |||
| 238 | Ga0157369_10269786 | |||
| 239 | Ga0157374_10273527 | |||
| 240 | Ga0157372_10125382 | |||
| 241 | Ga0157375_10094702 | |||
| 242 | Ga0163163_10002777 | |||
| 243 | Ga0163163_10128246 | |||
| 244 | Ga0163163_10131144 | |||
| 245 | Ga0157376_10122788 | |||
| 246 | Ga0157376_10191674 | |||
| 247 | Ga0157376_10318752 | |||
| 248 | Ga0213872_10000246 | |||
| 249 | Ga0213875_10025694 | |||
| 250 | Ga0209025_1000881 | |||
| 251 | Ga0207707_10065532 | |||
| 252 | Ga0207695_10315452 | |||
| 253 | Ga0207671_10020010 | |||
| 254 | Ga0207663_10178541 | |||
| 255 | Ga0207660_10008034 | |||
| 256 | Ga0207660_10108412 | |||
| 257 | Ga0207700_10014078 | |||
| 258 | Ga0207664_10108624 | |||
| 259 | Ga0207644_10041722 | |||
| 260 | Ga0207711_10100311 | |||
| 261 | Ga0207711_10240747 | |||
| 262 | Ga0207711_10396383 | |||
| 263 | Ga0207661_10000003 | |||
| 264 | Ga0207667_10051334 | |||
| 265 | Ga0207641_10040161 | |||
| 266 | Ga0207683_10095369 | |||
| 267 | Ga0207683_10388509 | |||
| 268 | Ga0265323_10003689 | |||
| 269 | Ga0265316_10002881 | |||
| 270 | Ga0265316_10033821 | |||
| 271 | Ga0265316_10223853 | |||
| 272 | Ga0265316_10273418 | |||
| 273 | Ga0307414_10135341 | |||
| 274 | Ga0373926_0003690 | |||
| 275 | Ga0373944_0025978 | |||
| 276 | Ga0373923_0044130 | |||
| 277 | Ga0373945_0014696 | |||
| 278 | Ga0373943_0002297 | |||
| 279 | Ga0373943_0046024 | |||
| 280 | Ga0373946_0004214 | |||
| 281 | Ga0316574_0235966 | |||
| 282 | Ga0373935_0021212 | |||
| 283 | Ga0373935_0093335 | |||
| 284 | Ga0373927_0009515 | |||
| 285 | Ga0373947_0001874 | |||
| 286 | Ga0373947_0005241 | |||
| 287 | Ga0373937_0018242 | |||
| 288 | Ga0373937_0086126 | |||
| 289 | Ga0373937_0234090 | |||
| 290 | Ga0373925_0000905 | |||
| 291 | Ga0373925_0001868 | |||
| 292 | Ga0373925_0375148 | |||
| 293 | Ga0436364_0414813 | |||
| 294 | Ga0436364_0664491 | |||
| 295 | Ga0395901_0201009 | |||
| 296 | Ga0436365_0049533 | |||
| 297 | Ga0436365_0433233 | |||
| 298 | Ga0436361_0972882 | |||
| 299 | Ga0439436_0048349 | |||
| 300 | Ga0439439_0005435 | |||
| 301 | Ga0439445_0010743 | |||
| 302 | Ga0439462_0003864 | |||
| 303 | Ga0466963_0020269 | |||
| 304 | Ga0466963_0098672 | |||
| 305 | Ga0466957_0035005 | |||
| 306 | Ga0451576_0116609 | |||
| 307 | Ga0466958_0010134 | |||
| 308 | Ga0466958_0013654 | |||
| 309 | Ga0466967_0465810 | |||
| 310 | Ga0495592_0001094 | |||
| 311 | Ga0495629_0000349 | |||
| 312 | Ga0495629_0127338 | |||
| 313 | Ga0495641_0001534 | |||
| 314 | Ga0495651_0015287 | |||
| 315 | Ga0495653_0020462 | |||
| 316 | Ga0495580_0007983 | |||
| 317 | Ga0495580_0017359 | |||
| 318 | Ga0495580_0046078 | |||
| 319 | Ga0495580_0172668 | |||
| 320 | Ga0495582_0000391 | |||
| 321 | Ga0495582_0277948 | |||
| 322 | Ga0495639_0000300 | |||
| 323 | Ga0495662_0000893 | |||
| 324 | Ga0495662_0021093 | |||
| 325 | Ga0495662_0021181 | |||
| 326 | Ga0495664_0037359 | |||
| 327 | Ga0495664_0066125 | |||
| 328 | Ga0495608_0119789 | |||
| 329 | Ga0495608_0143864 | |||
| 330 | Ga0495618_0081088 | |||
| 331 | Ga0495666_0033194 | |||
| 332 | Ga0495652_0163316 | |||
| 333 | Ga0495665_0020332 | |||
| 334 | Ga0495640_0010942 | |||
| 335 | Ga0495640_0064000 | |||
| 336 | Ga0495640_0068692 | |||
| 337 | Ga0495587_0025750 | |||
| 338 | Ga0495587_0218116 | |||
| 339 | Ga0495645_0030963 | |||
| 340 | Ga0495645_0054120 | |||
| 341 | Ga0495645_0133146 | |||
| 342 | Ga0495645_0223197 | |||
| 343 | Ga0495667_0018197 | |||
| 344 | Ga0495667_0020940 | |||
| 345 | Ga0495667_0031210 | |||
| 346 | Ga0495667_0236027 | |||
| 347 | Ga0495634_0030073 | |||
| 348 | Ga0495634_0077009 | |||
| 349 | Ga0495635_0011339 | |||
| 350 | Ga0495635_0041006 | |||
| 351 | Ga0495599_0029361 | |||
| 352 | Ga0495599_0092686 | |||
| 353 | Ga0495623_0026042 | |||
| 354 | Ga0495623_0062998 | |||
| 355 | Ga0495623_0190292 | |||
| 356 | Ga0495613_0003775 | |||
| 357 | Ga0495613_0242948 | |||
| 358 | Ga0495624_0005751 | |||
| 359 | Ga0495600_0075723 | |||
| 360 | Ga0495581_0002441 | |||
| 361 | Ga0495604_0044831 | |||
| 362 | Ga0495604_0053777 | |||
| 363 | Ga0495604_0253292 | |||
| 364 | Ga0495674_0023584 | |||
| 365 | Ga0495674_0026975 | |||
| 366 | Ga0495674_0037518 | |||
| 367 | Ga0495674_0067589 | |||
| 368 | Ga0495674_0069890 | |||
| 369 | Ga0495674_0108091 | |||
| 370 | Ga0495674_0215998 | |||
| 371 | Ga0495680_0063242 | |||
| 372 | Ga0495680_0093441 | |||
| 373 | Ga0495675_0161367 | |||
| 374 | Ga0495684_0002840 | |||
| 375 | Ga0495684_0008469 | |||
| 376 | Ga0495684_0015321 | |||
| 377 | Ga0495684_0027277 | |||
| 378 | Ga0495684_0258549 | |||
| 379 | Ga0495593_0030858 | |||
| 380 | Ga0495602_0102506 | |||
| 381 | Ga0495602_0162062 | |||
| 382 | Ga0495602_0178654 | |||
| 383 | Ga0495602_0202336 | |||
| 384 | Ga0496101_0043605 | |||
| 385 | Ga0496104_0042956 | |||
| 386 | Ga0496105_0007992 | |||
| 387 | Ga0496107_0214151 | |||
| 388 | Ga0496108_0049863 | |||
| 389 | Ga0496109_0018076 | |||
| 390 | Ga0496110_0098604 | |||
| 391 | Ga0496111_0034047 | |||
| 392 | Ga0496115_0244307 | |||
| 393 | nmdc:mga05p37_113438_c1 | |||
| 394 | nmdc:mga05p37_237259_c1 | |||
| 395 | Ga0495612_0077263 | |||
| 396 | Ga0495619_0002665 | |||
| 397 | Ga0495619_0036950 | |||
| 398 | 2643817890 | |||
| 399 | 2643880055 | |||
| 400 | 2643937548 | |||
| 401 | 2644078462 | |||
| 402 | 2644662393 | |||
| 403 | 2644693239 | |||
| 404 | 2644698715 | |||
| 405 | 2841866445 | |||
| 406 | 8005629706 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2zpu-assembly1.cif.gz_A | crystal structure of modified serine racemase from s.pombe. | 0.972 | 6 | 317 |
| 5cvc-assembly1.cif.gz_A | structure of maize serine racemase | 0.9644 | 7 | 321 |
| 5cvc-assembly2.cif.gz_B-2 | structure of maize serine racemase | 0.9585 | 7 | 321 |
| 3l6b-assembly1.cif.gz_A | x-ray crystal structure of human serine racemase in complex with malonate a potent inhibitor | 0.9552 | 10 | 317 |
| 6zsp-assembly1.cif.gz_BBB | human serine racemase bound to atp and malonate. | 0.955 | 10 | 315 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5cvcC02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9681 | 58 | 151 | 3.40.50.1100 |
| 2gn1B02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9678 | 59 | 153 | 3.40.50.1100 |
| 1wtcA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9587 | 7 | 317 | 3.40.50.1100 |
| af_P36007_52_148_3.40.50.1100 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9531 | 58 | 153 | 3.40.50.1100 |
| 1ve5A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9487 | 58 | 151 | 3.40.50.1100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3C7W2L2-F1-model_v4 | Serine dehydratase | 0.9845 | 73 | 162 |
GO:0000287
GO:0003941 GO:0005524 GO:0018114 GO:0030170 GO:0030378 GO:0070179 |
| AF-A0A850LNU9-F1-model_v4 | Pyridoxal-phosphate dependent enzyme | 0.9838 | 6 | 123 |
GO:0000287
GO:0003941 GO:0005524 GO:0018114 GO:0030170 GO:0030378 GO:0070179 |
| AF-A0A2N2YUQ3-F1-model_v4 | Serine dehydratase | 0.9829 | 6 | 110 |
GO:0000287
GO:0003941 GO:0005524 GO:0018114 GO:0030170 GO:0030378 GO:0070179 |
| AF-A0A1G3QVW4-F1-model_v4 | Serine dehydratase | 0.98 | 12 | 269 |
GO:0000287
GO:0003941 GO:0005524 GO:0018114 GO:0030170 GO:0030378 GO:0070179 |
| AF-A0A7W7QHX9-F1-model_v4 | Threonine dehydratase (EC 4.3.1.19) | 0.9794 | 5 | 317 |
GO:0000287
GO:0003941 GO:0004794 GO:0005524 GO:0008721 GO:0018114 GO:0030170 GO:0030378 |