F310563

General Info

Members Datasets Scaffolds Average Seq Length
202 142 404 571

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2831426010|2831427126
Length 668
Sequence PPSPIASRKPSKVEGIKENSNFLREPVATEILQDTTHFSENAVQLLKFHGSYQQDNRDNRAKGQEKDYQFMLRTKNPGGLVPPQLYLALDKLADEYGNHTLRATTRQGFQLHGILKKNLKAAIASIVNNLGSTLGACGDVNRNVMAPPVPWKNRPEYQYAWEYAQNVADLLSPQTGAYYEIWLDGEKAISAEESPEVKAARQSDGNGTLINNSEEPIYGTYYMPRKFKVCVTVPGDNSIDLYSQDLTLVVITNKKGKLEGFNVFAGGGLGRTHNKEETFARLADPIGYVAKDDVYDIVKAIVATQRDYGDRSDRRHSRLKYLLHDWGVEKFRAKVEEYFGKSIAPFKPLPEFKYQDFLGWHEQGDGKLFLGISIDNGRVKDEGSFQLKTALKEIVEQFNLPIRLTPHQNLIFCEIAPEDKPTIQEILDRRGIICDPSQIAPLERLSMACPALPTCGLAITESERAIPGILERITTVLDKIGLQNEEFVVRMTGCPNGCARPYMAELGFVGSAPESYQLWLGGSPNQTRLAQPYMERLHHNDLETQLEPIFVYFKQSRKPEESFGDFCDRIGFDAIREFAANYETQTVASLEITDDSDGLVETMADSRTVESDGQEVAIANTTIATYKTRRRVSLQHEIYNKLKDAAASQGKPMTELVNEALEAYLNNL

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
62 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
63 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
64 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
65 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
70 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
71 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
76 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
77 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
98 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
99 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
115 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
116 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
117 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
118 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
122 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
128 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
129 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
130 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
132 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
134 2831426010 Nostoc sp. 106C Isolate Unclassified
135 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
136 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
137 2849660919 Nostoc sp. T09 Isolate Unclassified
138 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
139 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
140 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
141 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
142 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.54
Metatranscriptomes 0
Isolates 4.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.42
Rhizosphere 80.2
Stem 0
Stem Tuber 0
Unclassified 1.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10120995 3300003323 Bacteria 6740
2 Ga0070680_100043558 3300005336 Bacteria 3646
3 Ga0070711_100035643 3300005439 Bacteria 3328
4 Ga0070705_100029709 3300005440 Bacteria 3010
5 Ga0070694_100003432 3300005444 Bacteria 9491
6 Ga0070708_100001513 3300005445 Bacteria 17748
7 Ga0070708_100003286 3300005445 Bacteria 12628
8 Ga0070681_10047353 3300005458 Bacteria 4298
9 Ga0070706_100003349 3300005467 Bacteria 15807
10 Ga0070706_100005464 3300005467 Bacteria 12106
11 Ga0070706_100027613 3300005467 Bacteria 5222
12 Ga0070706_100105964 3300005467 Bacteria 2616
13 Ga0070707_100002295 3300005468 Bacteria 18275
14 Ga0070707_100014004 3300005468 Bacteria 7515
15 Ga0070698_100002902 3300005471 Bacteria 18872
16 Ga0070698_100010681 3300005471 Bacteria 9783
17 Ga0070698_100017307 3300005471 Bacteria 7595
18 Ga0070699_100009612 3300005518 Bacteria 8376
19 Ga0070699_100029188 3300005518 Bacteria 4756
20 Ga0070697_100061233 3300005536 Bacteria 3070
21 Ga0070686_100001502 3300005544 Bacteria 13110
22 Ga0070696_100016003 3300005546 Bacteria 5044
23 Ga0070704_100004181 3300005549 Bacteria 8334
24 Ga0068855_100105957 3300005563 Bacteria 3232
25 Ga0068854_100015318 3300005578 Bacteria 5076
26 Ga0068864_100038158 3300005618 Bacteria 4101
27 Ga0068863_100023125 3300005841 Bacteria 5940
28 Ga0068858_100008080 3300005842 Bacteria 10132
29 Ga0070717_10031209 3300006028 Bacteria 4285
30 Ga0070717_10055669 3300006028 Bacteria 3264
31 Ga0070717_10065639 3300006028 Bacteria 3017
32 Ga0097621_100011202 3300006237 Bacteria 6603
33 Ga0068871_100034475 3300006358 Bacteria 4016
34 Ga0075433_10128148 3300006852 Bacteria 2254
35 Ga0075436_100014809 3300006914 Bacteria 5344
36 Ga0075436_100049292 3300006914 Bacteria 2906
37 Ga0075435_100101060 3300007076 Bacteria 2389
38 Ga0075435_100102647 3300007076 Bacteria 2371
39 Ga0105240_10039025 3300009093 Bacteria 6084
40 Ga0111539_10170652 3300009094 Bacteria 2542
41 Ga0105245_10131489 3300009098 Bacteria 2348
42 Ga0114129_10044456 3300009147 Bacteria 6248
43 Ga0114129_10050003 3300009147 Bacteria 5873
44 Ga0114129_10387894 3300009147 Bacteria 1843
45 Ga0105248_10255845 3300009177 Bacteria 1971
46 Ga0105238_10114238 3300009551 Bacteria 2680
47 Ga0157370_10012294 3300013104 Bacteria 8885
48 Ga0157370_10016070 3300013104 Bacteria 7585
49 Ga0157370_10068306 3300013104 Bacteria 3359
50 Ga0157369_10084390 3300013105 Bacteria 3395
51 Ga0157369_10119199 3300013105 Unclassified 2801
52 Ga0157372_10054820 3300013307 Bacteria 4449
53 Ga0157372_10106245 3300013307 Bacteria 3211
54 Ga0163163_10063334 3300014325 Bacteria 3666
55 Ga0182008_10011171 3300014497 Bacteria 4789
56 Ga0157379_10046642 3300014968 Bacteria 3866
57 Ga0213874_10005672 3300021377 Bacteria 2919
58 Ga0213874_10006188 3300021377 Bacteria 2824
59 Ga0213874_10014271 3300021377 Bacteria 2074
60 Ga0213875_10000498 3300021388 Bacteria 32954
61 Ga0213875_10018791 3300021388 Bacteria 3328
62 Ga0207684_10001742 3300025910 Bacteria 23018
63 Ga0207684_10003060 3300025910 Bacteria 16578
64 Ga0207684_10004830 3300025910 Bacteria 12611
65 Ga0207684_10008030 3300025910 Bacteria 9425
66 Ga0207684_10062973 3300025910 Bacteria 3149
67 Ga0207707_10009305 3300025912 Bacteria 8520
68 Ga0207695_10072036 3300025913 Bacteria 3528
69 Ga0207693_10000958 3300025915 Bacteria 25894
70 Ga0207693_10027051 3300025915 Bacteria 4536
71 Ga0207646_10000431 3300025922 Bacteria 55919
72 Ga0207646_10003391 3300025922 Bacteria 18002
73 Ga0207646_10013454 3300025922 Bacteria 7826
74 Ga0207667_10104592 3300025949 Bacteria 2920
75 Ga0207641_10028167 3300026088 Bacteria 4641
76 Ga0207641_10054773 3300026088 Bacteria 3386
77 Ga0265319_1000013 3300028563 Bacteria 180699
78 Ga0265338_10005472 3300028800 Bacteria 16573
79 Ga0265338_10007602 3300028800 Bacteria 13385
80 Ga0265338_10012506 3300028800 Bacteria 9672
81 Ga0265338_10014352 3300028800 Bacteria 8820
82 Ga0265338_10018486 3300028800 Bacteria 7460
83 Ga0265338_10030876 3300028800 Bacteria 5265
84 Ga0265320_10005529 3300031240 Bacteria 8105
85 Ga0265320_10005622 3300031240 Bacteria 8010
86 Ga0265339_10027746 3300031249 Bacteria 3225
87 Ga0265327_10000450 3300031251 Bacteria 74345
88 Ga0265327_10001053 3300031251 Bacteria 38592
89 Ga0265327_10005621 3300031251 Bacteria 10383
90 Ga0265316_10012735 3300031344 Bacteria 7517
91 Ga0265316_10071251 3300031344 Bacteria 2680
92 Ga0265313_10003080 3300031595 Bacteria 13828
93 Ga0265314_10017832 3300031711 Bacteria 5561
94 Ga0265342_10011019 3300031712 Bacteria 6208
95 Ga0307413_10010710 3300031824 Bacteria 4466
96 Ga0307413_10023730 3300031824 Bacteria 3329
97 Ga0307409_100162148 3300031995 Bacteria 1957
98 Ga0307416_100050780 3300032002 Bacteria 3308
99 Ga0307411_10020438 3300032005 Bacteria 3851
100 Ga0373954_0002003 3300035118 Bacteria 8465
101 Ga0373956_0000211 3300035119 Bacteria 22792
102 Ga0373961_0007619 3300035241 Bacteria 2622
103 Ga0373931_0073532 3300035691 Bacteria 1871
104 Ga0373933_0006313 3300035724 Bacteria 6453
105 Ga0373937_0036487 3300036401 Bacteria 4479
106 Ga0395905_0021635 3300037471 Bacteria 6083
107 Ga0436364_0178729 3300037853 Bacteria 19908
108 Ga0436364_0438153 3300037853 Bacteria 2632
109 Ga0436364_0590665 3300037853 Bacteria 2158
110 Ga0436364_0726974 3300037853 Bacteria 13796
111 Ga0242420_000594 3300038996 Bacteria 4213
112 Ga0436360_0574963 3300039438 Bacteria 2410
113 Ga0436361_0178149 3300039447 Bacteria 24741
114 Ga0436363_0371934 3300039450 Bacteria 8534
115 Ga0436363_0637807 3300039450 Unclassified 3489
116 Ga0436363_1286997 3300039450 Bacteria 5225
117 Ga0436363_1369733 3300039450 Bacteria 10272
118 Ga0436362_0579324 3300039453 Bacteria 7494
119 Ga0436362_1021225 3300039453 Bacteria 6874
120 Ga0451577_0060807 3300042876 Bacteria 3368
121 Ga0466969_0000277 3300044656 Bacteria 28084
122 Ga0466972_0012582 3300044658 Bacteria 4251
123 Ga0466965_0002773 3300044683 Bacteria 7528
124 Ga0466966_0000601 3300044684 Bacteria 22785
125 Ga0466964_0000082 3300044706 Bacteria 22002
126 Ga0453684_0014099 3300044712 Bacteria 12853
127 Ga0466968_0000100 3300044735 Bacteria 25614
128 Ga0466968_0012280 3300044735 Bacteria 3349
129 Ga0466970_0000018 3300044765 Bacteria 64473
130 Ga0466957_0018389 3300044842 Bacteria 4104
131 Ga0466960_0010403 3300044901 Bacteria 3863
132 Ga0466959_0002771 3300045049 Bacteria 11289
133 Ga0451576_0015794 3300045051 Bacteria 8353
134 Ga0466958_0018068 3300045836 Bacteria 4087
135 Ga0495629_0055827 3300046459 Bacteria 2762
136 Ga0495618_0000803 3300046514 Bacteria 21907
137 Ga0495630_0039026 3300046517 Bacteria 3551
138 Ga0495630_0078959 3300046517 Bacteria 2482
139 Ga0495634_0000960 3300046642 Bacteria 27269
140 Ga0495635_0050884 3300046663 Bacteria 2855
141 Ga0495613_0003461 3300046689 Bacteria 11805
142 Ga0496102_0020164 3300048905 Bacteria 5887
143 Ga0496102_0053327 3300048905 Bacteria 3686
144 Ga0496104_0063151 3300048907 Bacteria 3512
145 Ga0496104_0113825 3300048907 Bacteria 2594
146 Ga0496105_0019392 3300048908 Bacteria 5486
147 Ga0496106_0008984 3300048909 Bacteria 7383
148 Ga0496108_0004196 3300048911 Bacteria 11606
149 Ga0496108_0015596 3300048911 Bacteria 6199
150 Ga0496109_0018052 3300048912 Bacteria 6193
151 Ga0496110_0014871 3300048913 Bacteria 6467
152 Ga0496110_0015973 3300048913 Bacteria 6260
153 Ga0496111_0008008 3300048914 Bacteria 6971
154 Ga0496111_0074630 3300048914 Bacteria 2470
155 Ga0496112_0054374 3300048915 Bacteria 3933
156 Ga0496113_0005901 3300048916 Bacteria 7691
157 Ga0496114_0005410 3300048917 Bacteria 9987
158 Ga0496115_0000600 3300048918 Bacteria 27598
159 Ga0501031_0050663 3300049568 Bacteria 2705
160 Ga0501033_0044801 3300049570 Bacteria 3293
161 Ga0501037_0003568 3300049573 Bacteria 11285
162 Ga0501037_0033937 3300049573 Bacteria 3768
163 Ga0501038_0147321 3300049574 Bacteria 1921
164 Ga0501040_0011954 3300049576 Bacteria 5681
165 Ga0501041_0008368 3300049577 Bacteria 6083
166 Ga0501042_0014530 3300049578 Bacteria 5376
167 Ga0501046_0028719 3300049580 Bacteria 4528
168 Ga0501067_0009464 3300049583 Bacteria 5399
169 Ga0501068_0055449 3300049584 Bacteria 2401
170 Ga0501068_0074598 3300049584 Bacteria 2074
171 Ga0501071_0011348 3300049587 Bacteria 6001
172 Ga0501072_0029689 3300049588 Bacteria 4272
173 Ga0501072_0030163 3300049588 Bacteria 4239
174 Ga0501074_0059797 3300049590 Bacteria 2745
175 Ga0501074_0115575 3300049590 Bacteria 1920
176 Ga0501075_0072571 3300049591 Bacteria 2602
177 Ga0501075_0112918 3300049591 Bacteria 2066
178 Ga0501076_0059715 3300049592 Bacteria 3033
179 Ga0501077_0001429 3300049593 Bacteria 14339
180 Ga0501077_0014445 3300049593 Bacteria 4963
181 Ga0501079_0033772 3300049741 Bacteria 3936
182 Ga0501044_0002726 3300049823 Bacteria 20096
183 Ga0501045_0096874 3300049824 Bacteria 2183
184 nmdc:mga05p37_101863_c1 3300050507 Bacteria 3536
185 nmdc:mga06r32_33862_c1 3300050510 Unclassified 4814
186 nmdc:mga0rr50_91052_c1 3300050513 Bacteria 2374
187 nmdc:mga08x19_29505_c1 3300050514 Bacteria 3440
188 Ga0495601_0007213 3300053077 Bacteria 6520
189 Ga0495619_0007069 3300053085 Bacteria 7103
190 Ga0501084_0055951 3300054114 Bacteria 3300
191 Ga0590071_001077 3300059421 Bacteria 7389
192 Ga0501082_0028446 3300060353 Bacteria 4815
193 Ga0501082_0044109 3300060353 Bacteria 3847
194 2831427126 2831426010 Bacteria 8662725
195 2617913953 2617270889 Bacteria 9064343
196 2848701009 2848694841 Bacteria 9205737
197 2849667208 2849660919 Bacteria 8251853
198 2886629207 2886627955 Bacteria 7618130
199 2913851911 2913844669 Bacteria 8381711
200 2913914063 2913912277 Bacteria 9037797
201 2913940389 2913939268 Bacteria 8559644
202 642600101 642555144 Bacteria 9059191
203 rootH1_10120995
204 Ga0070680_100043558
205 Ga0070711_100035643
206 Ga0070705_100029709
207 Ga0070694_100003432
208 Ga0070708_100001513
209 Ga0070708_100003286
210 Ga0070681_10047353
211 Ga0070706_100003349
212 Ga0070706_100005464
213 Ga0070706_100027613
214 Ga0070706_100105964
215 Ga0070707_100002295
216 Ga0070707_100014004
217 Ga0070698_100002902
218 Ga0070698_100010681
219 Ga0070698_100017307
220 Ga0070699_100009612
221 Ga0070699_100029188
222 Ga0070697_100061233
223 Ga0070686_100001502
224 Ga0070696_100016003
225 Ga0070704_100004181
226 Ga0068855_100105957
227 Ga0068854_100015318
228 Ga0068864_100038158
229 Ga0068863_100023125
230 Ga0068858_100008080
231 Ga0070717_10031209
232 Ga0070717_10055669
233 Ga0070717_10065639
234 Ga0097621_100011202
235 Ga0068871_100034475
236 Ga0075433_10128148
237 Ga0075436_100014809
238 Ga0075436_100049292
239 Ga0075435_100101060
240 Ga0075435_100102647
241 Ga0105240_10039025
242 Ga0111539_10170652
243 Ga0105245_10131489
244 Ga0114129_10044456
245 Ga0114129_10050003
246 Ga0114129_10387894
247 Ga0105248_10255845
248 Ga0105238_10114238
249 Ga0157370_10012294
250 Ga0157370_10016070
251 Ga0157370_10068306
252 Ga0157369_10084390
253 Ga0157369_10119199
254 Ga0157372_10054820
255 Ga0157372_10106245
256 Ga0163163_10063334
257 Ga0182008_10011171
258 Ga0157379_10046642
259 Ga0213874_10005672
260 Ga0213874_10006188
261 Ga0213874_10014271
262 Ga0213875_10000498
263 Ga0213875_10018791
264 Ga0207684_10001742
265 Ga0207684_10003060
266 Ga0207684_10004830
267 Ga0207684_10008030
268 Ga0207684_10062973
269 Ga0207707_10009305
270 Ga0207695_10072036
271 Ga0207693_10000958
272 Ga0207693_10027051
273 Ga0207646_10000431
274 Ga0207646_10003391
275 Ga0207646_10013454
276 Ga0207667_10104592
277 Ga0207641_10028167
278 Ga0207641_10054773
279 Ga0265319_1000013
280 Ga0265338_10005472
281 Ga0265338_10007602
282 Ga0265338_10012506
283 Ga0265338_10014352
284 Ga0265338_10018486
285 Ga0265338_10030876
286 Ga0265320_10005529
287 Ga0265320_10005622
288 Ga0265339_10027746
289 Ga0265327_10000450
290 Ga0265327_10001053
291 Ga0265327_10005621
292 Ga0265316_10012735
293 Ga0265316_10071251
294 Ga0265313_10003080
295 Ga0265314_10017832
296 Ga0265342_10011019
297 Ga0307413_10010710
298 Ga0307413_10023730
299 Ga0307409_100162148
300 Ga0307416_100050780
301 Ga0307411_10020438
302 Ga0373954_0002003
303 Ga0373956_0000211
304 Ga0373961_0007619
305 Ga0373931_0073532
306 Ga0373933_0006313
307 Ga0373937_0036487
308 Ga0395905_0021635
309 Ga0436364_0178729
310 Ga0436364_0438153
311 Ga0436364_0590665
312 Ga0436364_0726974
313 Ga0242420_000594
314 Ga0436360_0574963
315 Ga0436361_0178149
316 Ga0436363_0371934
317 Ga0436363_0637807
318 Ga0436363_1286997
319 Ga0436363_1369733
320 Ga0436362_0579324
321 Ga0436362_1021225
322 Ga0451577_0060807
323 Ga0466969_0000277
324 Ga0466972_0012582
325 Ga0466965_0002773
326 Ga0466966_0000601
327 Ga0466964_0000082
328 Ga0453684_0014099
329 Ga0466968_0000100
330 Ga0466968_0012280
331 Ga0466970_0000018
332 Ga0466957_0018389
333 Ga0466960_0010403
334 Ga0466959_0002771
335 Ga0451576_0015794
336 Ga0466958_0018068
337 Ga0495629_0055827
338 Ga0495618_0000803
339 Ga0495630_0039026
340 Ga0495630_0078959
341 Ga0495634_0000960
342 Ga0495635_0050884
343 Ga0495613_0003461
344 Ga0496102_0020164
345 Ga0496102_0053327
346 Ga0496104_0063151
347 Ga0496104_0113825
348 Ga0496105_0019392
349 Ga0496106_0008984
350 Ga0496108_0004196
351 Ga0496108_0015596
352 Ga0496109_0018052
353 Ga0496110_0014871
354 Ga0496110_0015973
355 Ga0496111_0008008
356 Ga0496111_0074630
357 Ga0496112_0054374
358 Ga0496113_0005901
359 Ga0496114_0005410
360 Ga0496115_0000600
361 Ga0501031_0050663
362 Ga0501033_0044801
363 Ga0501037_0003568
364 Ga0501037_0033937
365 Ga0501038_0147321
366 Ga0501040_0011954
367 Ga0501041_0008368
368 Ga0501042_0014530
369 Ga0501046_0028719
370 Ga0501067_0009464
371 Ga0501068_0055449
372 Ga0501068_0074598
373 Ga0501071_0011348
374 Ga0501072_0029689
375 Ga0501072_0030163
376 Ga0501074_0059797
377 Ga0501074_0115575
378 Ga0501075_0072571
379 Ga0501075_0112918
380 Ga0501076_0059715
381 Ga0501077_0001429
382 Ga0501077_0014445
383 Ga0501079_0033772
384 Ga0501044_0002726
385 Ga0501045_0096874
386 nmdc:mga05p37_101863_c1
387 nmdc:mga06r32_33862_c1
388 nmdc:mga0rr50_91052_c1
389 nmdc:mga08x19_29505_c1
390 Ga0495601_0007213
391 Ga0495619_0007069
392 Ga0501084_0055951
393 Ga0590071_001077
394 Ga0501082_0028446
395 Ga0501082_0044109
396 2831427126
397 2617913953
398 2848701009
399 2849667208
400 2886629207
401 2913851911
402 2913914063
403 2913940389
404 642600101

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01077

NIR_SIR

Nitrite and sulphite reductase 4Fe-4S domain

162

343

0.95

PF03460

NIR_SIR_ferr

Nitrite/Sulfite reductase ferredoxin-like half domain

361

430

0.95

PF03460

NIR_SIR_ferr

Nitrite/Sulfite reductase ferredoxin-like half domain

62

128

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gep-assembly1.cif.gz_A sulfite reductase hemoprotein, oxidized, siroheme feiii [4fe-4s] +2,sulfite complex 0.9324 75 554
4g39-assembly1.cif.gz_A mutational analysis of sulfite reductase hemoprotein reveals the mechanism for coordinated electron and proton transfer 0.9319 73 554
7gep-assembly1.cif.gz_A sulfite reductase hemoprotein in complex with a partially oxidized sulfide species 0.9305 75 554
6c3m-assembly1.cif.gz_A wild type structure of sirhp 0.9279 73 554
6c3z-assembly1.cif.gz_A t477a sirhp 0.9279 74 554
ID Description Score Start End Superfamily
af_P47169_904_971_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.9903 65 129 3.90.480.10
af_Q60EA3_125_197_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.9855 73 141 3.90.480.10
af_Q9LZ66_121_190_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.9844 67 128 3.90.480.10
af_P17846_72_140_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.9821 73 128 3.90.480.10
af_Q10675_25_86_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.9662 74 131 3.90.480.10
ID Description Score Start End GO Terms
AF-A0A3B8XFV6-F1-model_v4 NADPH-dependent assimilatory sulfite reductase hemoprotein subunit 0.983 5 150 GO:0000103
GO:0009337
GO:0016002
GO:0020037
GO:0050311
GO:0051536
AF-A0A7W1TIC9-F1-model_v4 NADPH-dependent assimilatory sulfite reductase hemoprotein subunit 0.9808 1 552 GO:0000103
GO:0009337
GO:0016002
GO:0020037
GO:0046872
GO:0050311
GO:0051539
AF-A0A838J230-F1-model_v4 NADPH-dependent assimilatory sulfite reductase hemoprotein subunit 0.9752 3 144 GO:0000103
GO:0009337
GO:0016002
GO:0020037
GO:0050311
GO:0051536
AF-A0A2H3KPZ2-F1-model_v4 Precorrin-2 dehydrogenase 0.9745 77 554 GO:0000103
GO:0009337
GO:0016002
GO:0020037
GO:0046872
GO:0050311
GO:0051539
AF-Q8VWI4-F1-model_v4 Sulfite reductase 0.9722 472 552 GO:0000103
GO:0009337
GO:0009570
GO:0016002
GO:0020037
GO:0046872
GO:0050311
GO:0051539

Map