F310049

General Info

Members Datasets Scaffolds Average Seq Length
202 157 404 457

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10124061|Ga0307513_101240612
Length 488
Sequence MGAEDDRTGDVVDRATGGATGGEADEEPTIRIDGRTDGHGGRAARRDEAVRAAVDQGLLGPDTPIVGLLDVTGIRESAAALRAAFDAVTAPGTPVLHAFAVKATPLVPVLRLLHEEGVGAEVASPGELALARAAGVPPSRTVLDSPAKTPAELREALALGIAVNADNPQELDRIDGLMRSATSRSPLGIRVNPQVGGGSIGATSTATATSKFGVALRDEGAREWVVRAYAERPWLTRLHAHTGSQGIPLSLLAQGVAETYALAEEINRRVGRPQIDTLDIGGGLPVNFGSDTETPTYAQYARLLGEAVPGLFSGRYGLVTEFGRSLLAKHGTVVARVEYAKSAGGRPVAVTHAGVQVATRTVYAPGSWPLRISAYDGKGRPKTGAPVVQDVAGPACFAGDLLAEARALPLLEQGDYAAALDTGAYYFAHHYAYNSLARPGIYGFTQDGSGGGASFATVRRPQSLDEIVAESGGAHADALTTRRAPGRG

Samples

Sample ID Description Type Environment
1 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
4 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
5 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
6 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
7 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
8 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
9 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
10 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
11 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
12 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
13 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
14 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
15 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
16 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
17 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
18 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
19 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
20 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
21 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
22 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
23 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
24 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
25 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
26 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
27 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
28 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
29 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
30 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
31 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
32 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
33 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
34 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
35 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
36 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
37 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
38 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
39 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
40 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
41 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
42 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
43 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
44 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
45 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
46 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
47 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
48 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
49 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
50 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
51 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
52 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
53 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
54 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
55 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
56 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
57 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
58 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
59 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
60 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
61 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
62 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
65 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
66 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
67 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
68 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
69 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
70 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
71 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
72 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
73 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
77 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
78 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
79 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
80 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
81 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
82 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
83 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
84 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
85 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
86 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
107 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
108 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
109 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
110 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
111 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
112 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
113 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
114 2643221647 Streptomyces sp. Root369 Isolate Unclassified
115 2643221670 Streptomyces sp. Root431 Isolate Unclassified
116 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
117 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
118 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
119 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
120 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
121 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
122 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
123 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
124 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
125 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
126 2867428634 Streptomyces sp. RP5T Isolate Unclassified
127 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
128 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
129 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
130 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
131 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
132 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
133 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
134 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
135 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
136 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
137 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
138 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
139 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
140 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
141 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
142 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
143 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
144 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
145 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
146 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
147 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
148 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
149 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
150 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
151 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
152 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
153 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
154 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
155 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
156 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
157 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.74
Metatranscriptomes 0
Isolates 24.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.47
Nodule 0.5
Rhizoplane 0.5
Rhizosphere 79.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307513_10124061 3300031456 Bacteria 2543
2 rootH2_10061521 3300003320 Bacteria 3245
3 Ga0075363_100003703 3300006048 Bacteria 6572
4 Ga0075363_100019164 3300006048 Bacteria 3418
5 Ga0075367_10001107 3300006178 Bacteria 11160
6 Ga0075370_10053839 3300006353 Bacteria 2284
7 Ga0157369_10117971 3300013105 Bacteria 2817
8 Ga0182008_10001741 3300014497 Bacteria 14299
9 Ga0182007_10003984 3300015262 Bacteria 6816
10 Ga0183367_1005 3300015688 Bacteria 652063
11 Ga0207647_10049988 3300025904 Bacteria 2591
12 Ga0307515_10000054 3300028794 Bacteria 265489
13 Ga0307515_10073542 3300028794 Bacteria 4591
14 Ga0307511_10000340 3300030521 Bacteria 49829
15 Ga0307511_10058155 3300030521 Bacteria 2993
16 Ga0307511_10068638 3300030521 Bacteria 2616
17 Ga0307512_10001307 3300030522 Bacteria 35725
18 Ga0307512_10020198 3300030522 Bacteria 6039
19 Ga0307509_10007150 3300031507 Bacteria 14707
20 Ga0307508_10010584 3300031616 Bacteria 8437
21 Ga0307508_10016580 3300031616 Bacteria 6706
22 Ga0307508_10175697 3300031616 Bacteria 1745
23 Ga0307514_10009711 3300031649 Bacteria 8072
24 Ga0307507_10068185 3300033179 Bacteria 3248
25 Ga0307510_10011791 3300033180 Bacteria 10369
26 Ga0307510_10042412 3300033180 Bacteria 4959
27 Ga0395898_0001909 3300037466 Bacteria 26549
28 Ga0395898_0003242 3300037466 Bacteria 18283
29 Ga0395901_0033136 3300038443 Bacteria 5331
30 Ga0439436_0001426 3300041404 Bacteria 6917
31 Ga0451837_1643070 3300041494 Bacteria 4458
32 Ga0439442_003889 3300042002 Bacteria 2961
33 Ga0439448_0004517 3300042005 Bacteria 3930
34 Ga0439449_0010270 3300042007 Bacteria 3537
35 Ga0439462_0003460 3300042015 Bacteria 3788
36 Ga0450903_001137 3300042138 Bacteria 5031
37 Ga0466969_0009195 3300044656 Bacteria 5240
38 Ga0466972_0001698 3300044658 Bacteria 10777
39 Ga0466972_0007889 3300044658 Bacteria 5336
40 Ga0466966_0015860 3300044684 Bacteria 4979
41 Ga0466961_0006213 3300044693 Bacteria 7587
42 Ga0466961_0170832 3300044693 Bacteria 1352
43 Ga0466963_0041150 3300044694 Bacteria 3030
44 Ga0466968_0015996 3300044735 Bacteria 2981
45 Ga0466960_0034038 3300044901 Bacteria 2371
46 Ga0466967_0028382 3300045976 Bacteria 4671
47 Ga0466967_0194953 3300045976 Bacteria 1916
48 Ga0495627_003956 3300046453 Bacteria 6329
49 Ga0495592_0002872 3300046454 Bacteria 12254
50 Ga0495603_0117898 3300046455 Bacteria 1547
51 Ga0495629_0004918 3300046459 Bacteria 10030
52 Ga0495629_0013785 3300046459 Bacteria 5832
53 Ga0495629_0110080 3300046459 Bacteria 1920
54 Ga0495651_0009523 3300046462 Bacteria 7461
55 Ga0495582_0036061 3300046473 Bacteria 2720
56 Ga0495662_0002157 3300046476 Bacteria 9881
57 Ga0495662_0060053 3300046476 Bacteria 1836
58 Ga0495664_0002565 3300046477 Bacteria 9768
59 Ga0495594_0006301 3300046499 Bacteria 6104
60 Ga0495583_0060346 3300046506 Bacteria 1696
61 Ga0495616_0050384 3300046513 Bacteria 2082
62 Ga0495618_0034015 3300046514 Bacteria 3195
63 Ga0495628_0066420 3300046516 Bacteria 2820
64 Ga0495630_0017913 3300046517 Bacteria 5196
65 Ga0495630_0055314 3300046517 Bacteria 2974
66 Ga0495631_0012783 3300046518 Bacteria 4091
67 Ga0495643_0001651 3300046522 Bacteria 19621
68 Ga0495644_0025261 3300046523 Bacteria 2256
69 Ga0495648_0115442 3300046524 Bacteria 1452
70 Ga0495652_0053134 3300046529 Bacteria 3454
71 Ga0495640_0099929 3300046533 Bacteria 1905
72 Ga0495586_0047192 3300046535 Bacteria 2324
73 Ga0495587_0002435 3300046536 Bacteria 12421
74 Ga0495609_0052956 3300046538 Bacteria 1805
75 Ga0495645_0002875 3300046543 Bacteria 11693
76 Ga0495622_0090106 3300046557 Bacteria 1409
77 Ga0495668_0008301 3300046616 Bacteria 6504
78 Ga0495668_0053745 3300046616 Bacteria 2226
79 Ga0495634_0016034 3300046642 Bacteria 5366
80 Ga0495625_0004312 3300046660 Bacteria 13511
81 Ga0495657_0090852 3300046675 Bacteria 1959
82 Ga0495657_0125892 3300046675 Bacteria 1609
83 Ga0495646_0000234 3300046680 Bacteria 27621
84 Ga0495658_0026605 3300046683 Bacteria 3102
85 Ga0495613_0001765 3300046689 Bacteria 16461
86 Ga0495613_0056047 3300046689 Bacteria 2894
87 Ga0495613_0097296 3300046689 Bacteria 2127
88 Ga0495613_0119128 3300046689 Bacteria 1896
89 Ga0495671_0004616 3300046692 Bacteria 8184
90 Ga0495649_0042576 3300046694 Bacteria 2480
91 Ga0495600_0008286 3300046809 Bacteria 6380
92 Ga0495581_0006237 3300047315 Bacteria 6913
93 Ga0495581_0073295 3300047315 Bacteria 1981
94 Ga0495604_0116163 3300047317 Bacteria 1943
95 Ga0495636_0004722 3300047318 Bacteria 5344
96 Ga0495674_0135995 3300047319 Bacteria 2068
97 Ga0495676_0013163 3300047321 Bacteria 7441
98 Ga0495680_0027234 3300047322 Bacteria 4698
99 Ga0495687_001933 3300047443 Bacteria 17749
100 Ga0495687_004372 3300047443 Bacteria 9606
101 Ga0495687_027164 3300047443 Bacteria 2681
102 Ga0495675_0002538 3300047444 Bacteria 10925
103 Ga0495677_0055613 3300047445 Bacteria 1461
104 Ga0495685_047647 3300047447 Bacteria 1457
105 Ga0495681_0065848 3300047470 Bacteria 1655
106 Ga0495686_0051755 3300047472 Bacteria 2576
107 Ga0495593_0004416 3300047673 Bacteria 8357
108 Ga0495593_0030367 3300047673 Bacteria 2957
109 Ga0495602_0025678 3300048088 Bacteria 5697
110 Ga0495614_0028082 3300048089 Bacteria 2425
111 Ga0495626_0015342 3300048091 Bacteria 3926
112 Ga0496109_0005440 3300048912 Bacteria 10652
113 Ga0495678_025815 3300049459 Bacteria 2517
114 Ga0501031_0076428 3300049568 Bacteria 2181
115 Ga0501032_0019174 3300049569 Bacteria 4786
116 Ga0501032_0148517 3300049569 Bacteria 1542
117 Ga0501033_0042974 3300049570 Bacteria 3367
118 Ga0501033_0068563 3300049570 Bacteria 2607
119 Ga0501033_0139847 3300049570 Bacteria 1750
120 Ga0501033_0163648 3300049570 Bacteria 1600
121 Ga0501034_0060322 3300049571 Bacteria 3810
122 Ga0501034_0111788 3300049571 Bacteria 2722
123 Ga0501034_0291387 3300049571 Bacteria 1570
124 Ga0501036_0002521 3300049572 Bacteria 14372
125 Ga0501036_0004158 3300049572 Bacteria 11648
126 Ga0501036_0020947 3300049572 Bacteria 5491
127 Ga0501036_0092240 3300049572 Bacteria 2559
128 Ga0501038_0003367 3300049574 Bacteria 14911
129 Ga0501039_0005331 3300049575 Bacteria 9725
130 Ga0501043_0003162 3300049579 Bacteria 13628
131 Ga0501043_0019653 3300049579 Bacteria 5303
132 Ga0501046_0020959 3300049580 Bacteria 5397
133 Ga0501046_0021217 3300049580 Bacteria 5362
134 Ga0501047_0036202 3300049581 Bacteria 4769
135 Ga0501047_0036419 3300049581 Bacteria 4755
136 Ga0501047_0045824 3300049581 Bacteria 4227
137 Ga0501047_0129708 3300049581 Bacteria 2402
138 Ga0501048_0013233 3300049582 Bacteria 6122
139 Ga0501048_0038114 3300049582 Bacteria 3450
140 Ga0501070_0007258 3300049586 Bacteria 9408
141 Ga0501074_0169351 3300049590 Bacteria 1559
142 Ga0501080_0095759 3300049742 Bacteria 2756
143 Ga0501035_0001046 3300049822 Bacteria 28949
144 Ga0501035_0040090 3300049822 Bacteria 4234
145 Ga0501035_0215515 3300049822 Bacteria 1641
146 Ga0501044_0024045 3300049823 Bacteria 6472
147 Ga0501044_0039909 3300049823 Bacteria 4894
148 Ga0501044_0047321 3300049823 Bacteria 4448
149 Ga0501044_0115076 3300049823 Bacteria 2694
150 nmdc:mga03n38_3510_c2 3300050490 Bacteria 4095
151 nmdc:mga06z11_1590_c1 3300050494 Bacteria 8462
152 nmdc:mga04h51_1397_c1 3300050495 Bacteria 5577
153 Ga0466962_0025252 3300061719 Bacteria 2853
154 2547411731 2547132111 Bacteria 8013147
155 2585310391 2582581313 Bacteria 10042643
156 2585319662 2582581314 Bacteria 11452267
157 2616695413 2616644814 Bacteria 11555299
158 2643948145 2643221587 Bacteria 7586415
159 2644265288 2643221647 Bacteria 10741251
160 2644388903 2643221670 Bacteria 6497041
161 2644429618 2643221677 Bacteria 7584031
162 2785369168 2784746768 Bacteria 10036182
163 2786670305 2786546132 Bacteria 10419719
164 2804847360 2802429296 Bacteria 7227771
165 2808920304 2808606375 Bacteria 9466072
166 2812358472 2811994879 Bacteria 9313447
167 2812480808 2811994917 Bacteria 7761064
168 2852636970 2852635781 Bacteria 8251373
169 2862179651 2862178590 Bacteria 8583590
170 2862285204 2862281513 Bacteria 9621493
171 2867436979 2867428634 Bacteria 9590268
172 2877681379 2877676314 Bacteria 9512378
173 2912720366 2912715099 Bacteria 9460473
174 2912724573 2912723979 Bacteria 8557534
175 2918504249 2918501144 Bacteria 8668083
176 2935395142 2935390628 Bacteria 7043367
177 2946067406 2946064051 Bacteria 8957905
178 2947229829 2947224130 Bacteria 9938529
179 2954007822 2954002825 Bacteria 9173742
180 2954386522 2954380949 Bacteria 10050426
181 2954676651 2954673503 Bacteria 9685905
182 2954687516 2954682443 Bacteria 9862841
183 2954697335 2954691527 Bacteria 10720516
184 2954704935 2954701450 Bacteria 10834262
185 2954716503 2954711539 Bacteria 10867210
186 2954726450 2954721474 Bacteria 10456478
187 2954735359 2954731030 Bacteria 10243860
188 2954745373 2954740390 Bacteria 10229294
189 2954754216 2954749733 Bacteria 10366972
190 2954764349 2954759201 Bacteria 9358192
191 2990088662 2990088156 Bacteria 6657676
192 3006324347 3006321560 Bacteria 8247479
193 3006396500 3006393351 Bacteria 6615579
194 3006489539 3006486233 Bacteria 8157040
195 3006501245 3006493962 Bacteria 8825450
196 8008567929 8008558824 Bacteria 10610750
197 8008579106 8008574985 Bacteria 7815457
198 8025416796 8025413630 Bacteria 7014048
199 8025479211 8025478263 Bacteria 8209203
200 8056450772 8056447290 Bacteria 7680491
201 8056671435 8056667051 Bacteria 6953971
202 8056833630 8056829672 Bacteria 9045328
203 Ga0307513_10124061
204 rootH2_10061521
205 Ga0075363_100003703
206 Ga0075363_100019164
207 Ga0075367_10001107
208 Ga0075370_10053839
209 Ga0157369_10117971
210 Ga0182008_10001741
211 Ga0182007_10003984
212 Ga0183367_1005
213 Ga0207647_10049988
214 Ga0307515_10000054
215 Ga0307515_10073542
216 Ga0307511_10000340
217 Ga0307511_10058155
218 Ga0307511_10068638
219 Ga0307512_10001307
220 Ga0307512_10020198
221 Ga0307509_10007150
222 Ga0307508_10010584
223 Ga0307508_10016580
224 Ga0307508_10175697
225 Ga0307514_10009711
226 Ga0307507_10068185
227 Ga0307510_10011791
228 Ga0307510_10042412
229 Ga0395898_0001909
230 Ga0395898_0003242
231 Ga0395901_0033136
232 Ga0439436_0001426
233 Ga0451837_1643070
234 Ga0439442_003889
235 Ga0439448_0004517
236 Ga0439449_0010270
237 Ga0439462_0003460
238 Ga0450903_001137
239 Ga0466969_0009195
240 Ga0466972_0001698
241 Ga0466972_0007889
242 Ga0466966_0015860
243 Ga0466961_0006213
244 Ga0466961_0170832
245 Ga0466963_0041150
246 Ga0466968_0015996
247 Ga0466960_0034038
248 Ga0466967_0028382
249 Ga0466967_0194953
250 Ga0495627_003956
251 Ga0495592_0002872
252 Ga0495603_0117898
253 Ga0495629_0004918
254 Ga0495629_0013785
255 Ga0495629_0110080
256 Ga0495651_0009523
257 Ga0495582_0036061
258 Ga0495662_0002157
259 Ga0495662_0060053
260 Ga0495664_0002565
261 Ga0495594_0006301
262 Ga0495583_0060346
263 Ga0495616_0050384
264 Ga0495618_0034015
265 Ga0495628_0066420
266 Ga0495630_0017913
267 Ga0495630_0055314
268 Ga0495631_0012783
269 Ga0495643_0001651
270 Ga0495644_0025261
271 Ga0495648_0115442
272 Ga0495652_0053134
273 Ga0495640_0099929
274 Ga0495586_0047192
275 Ga0495587_0002435
276 Ga0495609_0052956
277 Ga0495645_0002875
278 Ga0495622_0090106
279 Ga0495668_0008301
280 Ga0495668_0053745
281 Ga0495634_0016034
282 Ga0495625_0004312
283 Ga0495657_0090852
284 Ga0495657_0125892
285 Ga0495646_0000234
286 Ga0495658_0026605
287 Ga0495613_0001765
288 Ga0495613_0056047
289 Ga0495613_0097296
290 Ga0495613_0119128
291 Ga0495671_0004616
292 Ga0495649_0042576
293 Ga0495600_0008286
294 Ga0495581_0006237
295 Ga0495581_0073295
296 Ga0495604_0116163
297 Ga0495636_0004722
298 Ga0495674_0135995
299 Ga0495676_0013163
300 Ga0495680_0027234
301 Ga0495687_001933
302 Ga0495687_004372
303 Ga0495687_027164
304 Ga0495675_0002538
305 Ga0495677_0055613
306 Ga0495685_047647
307 Ga0495681_0065848
308 Ga0495686_0051755
309 Ga0495593_0004416
310 Ga0495593_0030367
311 Ga0495602_0025678
312 Ga0495614_0028082
313 Ga0495626_0015342
314 Ga0496109_0005440
315 Ga0495678_025815
316 Ga0501031_0076428
317 Ga0501032_0019174
318 Ga0501032_0148517
319 Ga0501033_0042974
320 Ga0501033_0068563
321 Ga0501033_0139847
322 Ga0501033_0163648
323 Ga0501034_0060322
324 Ga0501034_0111788
325 Ga0501034_0291387
326 Ga0501036_0002521
327 Ga0501036_0004158
328 Ga0501036_0020947
329 Ga0501036_0092240
330 Ga0501038_0003367
331 Ga0501039_0005331
332 Ga0501043_0003162
333 Ga0501043_0019653
334 Ga0501046_0020959
335 Ga0501046_0021217
336 Ga0501047_0036202
337 Ga0501047_0036419
338 Ga0501047_0045824
339 Ga0501047_0129708
340 Ga0501048_0013233
341 Ga0501048_0038114
342 Ga0501070_0007258
343 Ga0501074_0169351
344 Ga0501080_0095759
345 Ga0501035_0001046
346 Ga0501035_0040090
347 Ga0501035_0215515
348 Ga0501044_0024045
349 Ga0501044_0039909
350 Ga0501044_0047321
351 Ga0501044_0115076
352 nmdc:mga03n38_3510_c2
353 nmdc:mga06z11_1590_c1
354 nmdc:mga04h51_1397_c1
355 Ga0466962_0025252
356 2547411731
357 2585310391
358 2585319662
359 2616695413
360 2643948145
361 2644265288
362 2644388903
363 2644429618
364 2785369168
365 2786670305
366 2804847360
367 2808920304
368 2812358472
369 2812480808
370 2852636970
371 2862179651
372 2862285204
373 2867436979
374 2877681379
375 2912720366
376 2912724573
377 2918504249
378 2935395142
379 2946067406
380 2947229829
381 2954007822
382 2954386522
383 2954676651
384 2954687516
385 2954697335
386 2954704935
387 2954716503
388 2954726450
389 2954735359
390 2954745373
391 2954754216
392 2954764349
393 2990088662
394 3006324347
395 3006396500
396 3006489539
397 3006501245
398 8008567929
399 8008579106
400 8025416796
401 8025479211
402 8056450772
403 8056671435
404 8056833630

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02784

Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

73

328

0.91

PF00278

Orn_DAP_Arg_deC

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

33

423

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p3e-assembly1.cif.gz_A crystal structure of aq1208 from aquifex aeolicus 0.8906 36 437
6n2f-assembly1.cif.gz_B meso-diaminopimelate decarboxylase from arabidopsis thaliana (isoform 2) 0.8859 33 438
3vab-assembly1.cif.gz_B crystal structure of diaminopimelate decarboxylase from brucella melitensis bound to plp 0.8845 37 435
2plk-assembly1.cif.gz_B crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from vibrio vulnificus 0.8823 35 408
2yxx-assembly1.cif.gz_A crystal structure analysis of diaminopimelate decarboxylate (lysa) 0.8796 20 435
ID Description Score Start End Superfamily
af_Q75JL7_37_281_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9028 44 281 3.20.20.10
1twiC01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.8964 289 435 2.40.37.10
af_Q75JL7_282_429_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.8922 285 434 2.40.37.10
af_Q75JL7_282_429_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.8755 285 434 2.40.37.10
af_Q75JL7_37_281_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8746 44 281 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A4Q4DJE2-F1-model_v4 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.9797 12 444 GO:0008836
GO:0009089
AF-A0A7W2E035-F1-model_v4 Diaminopimelate decarboxylase 0.979 6 446 GO:0008836
GO:0009089
AF-A0A0C1XBN2-F1-model_v4 deleted 0.9782 19 445
AF-A0A1S2K6S1-F1-model_v4 Diaminopimelate decarboxylase 0.9766 12 445 GO:0008836
GO:0009089
AF-A0A7H8N6V5-F1-model_v4 Diaminopimelate decarboxylase 0.9763 6 449 GO:0008836
GO:0009089

Map