F310006

General Info

Members Datasets Scaffolds Average Seq Length
202 105 404 456

Family's Representative Sequence

Representative Sequence 3300028558|Ga0265326_10004108|Ga0265326_100041084
Length 541
Sequence VTEKPTLLIVDDEKPTRDGLRAALEDRYDVYVAEDARAAMELLERENFDVLLTDFRLPNEDGMKLIARAKSLARPPICILMTAYGSEELAVDAMKRGADDYIAKGRLQIDELEMRIARALRRQNLEVENVSLRQQLDSRFGLDSLTGESSAMREIFEVVQQVAPTRASVLLTGESGTGKELVAKAIHQLSPRARQPFVTVHCAALAPTLLESELFGHEKGAFTGAHERRIGRFEQAQGGTLFLDEIGEIDAAIQVKLLRFLGERTFERVGSNKTLTADVRLIAATNKNLEEQVKAGEFRDDLFFRLRVVEIHLPPLRERAGDIPLLAQKFLREYAAENGKPVNEFTADALEWLANYSWPGNVRELRTAIEHAVVLCRGEKISARDLPPPVRAGGQAGPPAPAPAQNDLTVREAEKQLIIRALKETGGNRTLAAKKNRHEPANVSSQVASVPSGRILIYAPVGTDSETDSHAGGRRGVPVSAVPGVEPGHRRIGVSLRPAGISEPGHPGGNGCGAAGAEPCGRQGLHHVVYPSVQPLPGAKS

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
34 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
35 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
36 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
37 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
41 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
42 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
43 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
44 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
45 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
52 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
53 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
54 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
55 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
56 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
57 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
58 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
59 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
60 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
61 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
69 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
76 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
88 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
105 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.5
Nodule 0
Rhizoplane 0.5
Rhizosphere 99.01
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10004108 3300028558 Bacteria 4695
2 Ga0070690_100003170 3300005330 Bacteria 8961
3 Ga0070690_100151178 3300005330 Bacteria 1584
4 Ga0070689_100001428 3300005340 Bacteria 15221
5 Ga0070688_100018669 3300005365 Bacteria 4006
6 Ga0070714_100010179 3300005435 Bacteria 7424
7 Ga0070701_10002352 3300005438 Bacteria 7259
8 Ga0070711_100008330 3300005439 Bacteria 6347
9 Ga0070694_100001128 3300005444 Bacteria 15318
10 Ga0070685_10106515 3300005466 Bacteria 1720
11 Ga0070686_100004228 3300005544 Bacteria 7906
12 Ga0070704_100096900 3300005549 Bacteria 2212
13 Ga0068855_100094875 3300005563 Bacteria 3439
14 Ga0068855_100165897 3300005563 Bacteria 2504
15 Ga0068855_100299081 3300005563 Bacteria 1783
16 Ga0068857_100003704 3300005577 Bacteria 12823
17 Ga0068857_100061337 3300005577 Bacteria 3341
18 Ga0068856_100000391 3300005614 Bacteria 47954
19 Ga0070702_100069699 3300005615 Bacteria 2073
20 Ga0068859_100156000 3300005617 Bacteria 2360
21 Ga0070712_100117480 3300006175 Bacteria 1996
22 Ga0097621_100048083 3300006237 Bacteria 3459
23 Ga0097620_100155992 3300006931 Bacteria 2360
24 Ga0105240_10005659 3300009093 Bacteria 18545
25 Ga0105240_10018041 3300009093 Bacteria 9491
26 Ga0105240_10207530 3300009093 Bacteria 2292
27 Ga0105240_10334659 3300009093 Bacteria 1721
28 Ga0111539_10133117 3300009094 Bacteria 2911
29 Ga0105248_10126458 3300009177 Bacteria 2883
30 Ga0105238_10005767 3300009551 Bacteria 12253
31 Ga0105238_10042812 3300009551 Bacteria 4583
32 Ga0157375_10000017 3300013308 Bacteria 286152
33 Ga0163163_10000018 3300014325 Bacteria 199503
34 Ga0163163_10019905 3300014325 Bacteria 6312
35 Ga0163163_10231287 3300014325 Bacteria 1898
36 Ga0207695_10029761 3300025913 Bacteria 6025
37 Ga0207695_10195123 3300025913 Bacteria 1941
38 Ga0207652_10136565 3300025921 Bacteria 2190
39 Ga0207694_10003752 3300025924 Bacteria 12041
40 Ga0207694_10080102 3300025924 Bacteria 2563
41 Ga0207670_10020429 3300025936 Bacteria 4069
42 Ga0207670_10108510 3300025936 Bacteria 1996
43 Ga0207711_10149254 3300025941 Bacteria 2108
44 Ga0207667_10048057 3300025949 Bacteria 4513
45 Ga0207667_10138442 3300025949 Bacteria 2506
46 Ga0207702_10015545 3300026078 Bacteria 6299
47 Ga0265337_1000017 3300028556 Bacteria 76887
48 Ga0265337_1000299 3300028556 Bacteria 26474
49 Ga0265337_1005377 3300028556 Bacteria 5093
50 Ga0265337_1007708 3300028556 Bacteria 3997
51 Ga0265326_10005195 3300028558 Bacteria 4104
52 Ga0265319_1000007 3300028563 Bacteria 217194
53 Ga0265319_1001905 3300028563 Bacteria 11852
54 Ga0265319_1004745 3300028563 Bacteria 6659
55 Ga0265334_10010618 3300028573 Bacteria 3888
56 Ga0265334_10019995 3300028573 Bacteria 2746
57 Ga0265323_10002551 3300028653 Bacteria 8291
58 Ga0265323_10002941 3300028653 Bacteria 7617
59 Ga0265336_10004781 3300028666 Bacteria 5078
60 Ga0265336_10014033 3300028666 Bacteria 2661
61 Ga0265338_10000105 3300028800 Bacteria 156108
62 Ga0265338_10000135 3300028800 Bacteria 135743
63 Ga0265338_10000330 3300028800 Bacteria 86006
64 Ga0265338_10000395 3300028800 Bacteria 78200
65 Ga0265338_10000431 3300028800 Bacteria 75210
66 Ga0265338_10000945 3300028800 Bacteria 48867
67 Ga0265338_10001734 3300028800 Bacteria 34498
68 Ga0265338_10002454 3300028800 Bacteria 27760
69 Ga0265338_10004717 3300028800 Bacteria 18247
70 Ga0265338_10005285 3300028800 Bacteria 16903
71 Ga0265338_10005458 3300028800 Bacteria 16591
72 Ga0265338_10006737 3300028800 Bacteria 14511
73 Ga0265338_10010592 3300028800 Bacteria 10784
74 Ga0265338_10017177 3300028800 Bacteria 7816
75 Ga0265338_10021436 3300028800 Bacteria 6737
76 Ga0265338_10036997 3300028800 Bacteria 4656
77 Ga0265338_10040618 3300028800 Bacteria 4367
78 Ga0265338_10045455 3300028800 Bacteria 4037
79 Ga0265338_10051224 3300028800 Bacteria 3720
80 Ga0265338_10065668 3300028800 Bacteria 3145
81 Ga0265324_10000064 3300029957 Bacteria 91244
82 Ga0265324_10000247 3300029957 Bacteria 40078
83 Ga0265324_10009434 3300029957 Bacteria 3811
84 Ga0265324_10016468 3300029957 Bacteria 2698
85 Ga0265324_10031689 3300029957 Bacteria 1850
86 Ga0265332_10032570 3300031238 Bacteria 2271
87 Ga0265320_10000340 3300031240 Bacteria 38089
88 Ga0265320_10001146 3300031240 Bacteria 19499
89 Ga0265320_10013802 3300031240 Bacteria 4630
90 Ga0265320_10035485 3300031240 Bacteria 2527
91 Ga0265325_10017005 3300031241 Bacteria 4052
92 Ga0265340_10001303 3300031247 Bacteria 14291
93 Ga0265340_10014367 3300031247 Bacteria 4138
94 Ga0265339_10006038 3300031249 Bacteria 7997
95 Ga0265339_10033901 3300031249 Bacteria 2872
96 Ga0265327_10000981 3300031251 Bacteria 40636
97 Ga0265327_10006796 3300031251 Bacteria 9024
98 Ga0265327_10018037 3300031251 Bacteria 4391
99 Ga0265327_10030715 3300031251 Bacteria 3032
100 Ga0265327_10060095 3300031251 Bacteria 1944
101 Ga0265316_10007786 3300031344 Bacteria 10032
102 Ga0265316_10022839 3300031344 Bacteria 5264
103 Ga0265316_10048517 3300031344 Bacteria 3351
104 Ga0265316_10054815 3300031344 Bacteria 3120
105 Ga0265316_10067487 3300031344 Bacteria 2766
106 Ga0265316_10203639 3300031344 Bacteria 1466
107 Ga0265313_10034966 3300031595 Bacteria 2534
108 Ga0265314_10000241 3300031711 Bacteria 80581
109 Ga0265314_10065773 3300031711 Bacteria 2447
110 Ga0265342_10044967 3300031712 Bacteria 2660
111 Ga0265342_10076951 3300031712 Bacteria 1933
112 Ga0316576_10121442 3300031727 Bacteria 1962
113 Ga0316577_10053911 3300031733 Bacteria 2245
114 Ga0373938_0005303 3300034957 Bacteria 2189
115 Ga0373928_0000376 3300035084 Bacteria 8953
116 Ga0373929_0000665 3300035085 Bacteria 6615
117 Ga0373944_0000149 3300035089 Bacteria 13721
118 Ga0373951_0002189 3300035091 Bacteria 4971
119 Ga0373932_0000001 3300035112 Bacteria 1459067
120 Ga0373962_0000165 3300035242 Bacteria 14068
121 Ga0373931_0000008 3300035691 Bacteria 362269
122 Ga0373931_0034406 3300035691 Bacteria 2630
123 Ga0373927_0009764 3300035695 Bacteria 6435
124 Ga0373927_0011382 3300035695 Bacteria 5925
125 Ga0373927_0051812 3300035695 Bacteria 2654
126 Ga0373947_0018524 3300035725 Bacteria 4008
127 Ga0373937_0002350 3300036401 Bacteria 15772
128 Ga0373925_0000158 3300037068 Bacteria 72961
129 Ga0373925_0009994 3300037068 Bacteria 6890
130 Ga0373925_0050477 3300037068 Bacteria 3102
131 Ga0451577_0000910 3300042876 Bacteria 43577
132 Ga0451577_0009483 3300042876 Bacteria 9367
133 Ga0451577_0014539 3300042876 Bacteria 7334
134 Ga0453684_0001863 3300044712 Bacteria 54972
135 Ga0453684_0002669 3300044712 Bacteria 42512
136 Ga0453684_0037008 3300044712 Bacteria 6708
137 Ga0453684_0155478 3300044712 Bacteria 2712
138 Ga0453684_0172876 3300044712 Bacteria 2544
139 Ga0453684_0313873 3300044712 Bacteria 1778
140 Ga0451576_0044791 3300045051 Bacteria 4661
141 Ga0451576_0062316 3300045051 Bacteria 3888
142 Ga0451576_0082350 3300045051 Bacteria 3347
143 Ga0451576_0130752 3300045051 Bacteria 2617
144 Ga0495629_0031475 3300046459 Bacteria 3757
145 Ga0495641_0035544 3300046461 Bacteria 2347
146 Ga0495639_0047481 3300046475 Bacteria 1945
147 Ga0495664_0005625 3300046477 Bacteria 6892
148 Ga0495594_0118341 3300046499 Bacteria 1496
149 Ga0495618_0000831 3300046514 Bacteria 21479
150 Ga0495618_0000893 3300046514 Bacteria 20537
151 Ga0495628_0000139 3300046516 Bacteria 62212
152 Ga0495630_0000135 3300046517 Bacteria 58009
153 Ga0495630_0012432 3300046517 Bacteria 6181
154 Ga0495630_0012668 3300046517 Bacteria 6129
155 Ga0495630_0024313 3300046517 Bacteria 4480
156 Ga0495666_0004427 3300046526 Bacteria 7099
157 Ga0495652_0062344 3300046529 Bacteria 3144
158 Ga0495652_0192647 3300046529 Bacteria 1554
159 Ga0495640_0004889 3300046533 Bacteria 10667
160 Ga0495640_0030672 3300046533 Bacteria 3847
161 Ga0495586_0000033 3300046535 Bacteria 89808
162 Ga0495586_0000302 3300046535 Bacteria 31351
163 Ga0495586_0001252 3300046535 Bacteria 14248
164 Ga0495586_0007961 3300046535 Bacteria 5651
165 Ga0495586_0008828 3300046535 Bacteria 5368
166 Ga0495587_0114534 3300046536 Bacteria 1547
167 Ga0495645_0002637 3300046543 Bacteria 12195
168 Ga0495645_0065862 3300046543 Bacteria 2621
169 Ga0495622_0042158 3300046557 Bacteria 2122
170 Ga0495634_0001690 3300046642 Bacteria 19227
171 Ga0495635_0047448 3300046663 Bacteria 2962
172 Ga0495599_0032258 3300046678 Bacteria 3289
173 Ga0495658_0051235 3300046683 Bacteria 2338
174 Ga0495658_0085929 3300046683 Bacteria 1855
175 Ga0495613_0003132 3300046689 Bacteria 12388
176 Ga0495613_0075990 3300046689 Bacteria 2445
177 Ga0495624_0061446 3300046690 Bacteria 2354
178 Ga0495581_0015615 3300047315 Bacteria 4407
179 Ga0495674_0006026 3300047319 Bacteria 11648
180 Ga0495674_0023344 3300047319 Bacteria 5702
181 Ga0495676_0005720 3300047321 Bacteria 11401
182 Ga0495676_0133682 3300047321 Bacteria 1787
183 Ga0495684_0152014 3300047471 Bacteria 1730
184 Ga0496115_0005903 3300048918 Bacteria 8926
185 Ga0501031_0000113 3300049568 Bacteria 43219
186 Ga0501032_0001671 3300049569 Bacteria 17620
187 Ga0501032_0038529 3300049569 Bacteria 3255
188 Ga0501033_0007112 3300049570 Bacteria 8735
189 Ga0501033_0019450 3300049570 Bacteria 5136
190 Ga0501033_0041448 3300049570 Bacteria 3435
191 Ga0501034_0084495 3300049571 Bacteria 3176
192 Ga0501043_0035044 3300049579 Bacteria 3947
193 Ga0501047_0182147 3300049581 Bacteria 1967
194 Ga0501080_0056315 3300049742 Bacteria 3662
195 Ga0501035_0003627 3300049822 Bacteria 14724
196 Ga0501035_0078614 3300049822 Bacteria 2914
197 Ga0501044_0000792 3300049823 Bacteria 38210
198 Ga0501044_0011974 3300049823 Bacteria 9400
199 nmdc:mga09592_30814_c1 3300050508 Bacteria 4465
200 nmdc:mga08y16_138479_c1 3300050511 Bacteria 2530
201 Ga0495601_0022947 3300053077 Bacteria 3835
202 Ga0500650_0009936 3300053098 Bacteria 3842
203 Ga0265326_10004108
204 Ga0070690_100003170
205 Ga0070690_100151178
206 Ga0070689_100001428
207 Ga0070688_100018669
208 Ga0070714_100010179
209 Ga0070701_10002352
210 Ga0070711_100008330
211 Ga0070694_100001128
212 Ga0070685_10106515
213 Ga0070686_100004228
214 Ga0070704_100096900
215 Ga0068855_100094875
216 Ga0068855_100165897
217 Ga0068855_100299081
218 Ga0068857_100003704
219 Ga0068857_100061337
220 Ga0068856_100000391
221 Ga0070702_100069699
222 Ga0068859_100156000
223 Ga0070712_100117480
224 Ga0097621_100048083
225 Ga0097620_100155992
226 Ga0105240_10005659
227 Ga0105240_10018041
228 Ga0105240_10207530
229 Ga0105240_10334659
230 Ga0111539_10133117
231 Ga0105248_10126458
232 Ga0105238_10005767
233 Ga0105238_10042812
234 Ga0157375_10000017
235 Ga0163163_10000018
236 Ga0163163_10019905
237 Ga0163163_10231287
238 Ga0207695_10029761
239 Ga0207695_10195123
240 Ga0207652_10136565
241 Ga0207694_10003752
242 Ga0207694_10080102
243 Ga0207670_10020429
244 Ga0207670_10108510
245 Ga0207711_10149254
246 Ga0207667_10048057
247 Ga0207667_10138442
248 Ga0207702_10015545
249 Ga0265337_1000017
250 Ga0265337_1000299
251 Ga0265337_1005377
252 Ga0265337_1007708
253 Ga0265326_10005195
254 Ga0265319_1000007
255 Ga0265319_1001905
256 Ga0265319_1004745
257 Ga0265334_10010618
258 Ga0265334_10019995
259 Ga0265323_10002551
260 Ga0265323_10002941
261 Ga0265336_10004781
262 Ga0265336_10014033
263 Ga0265338_10000105
264 Ga0265338_10000135
265 Ga0265338_10000330
266 Ga0265338_10000395
267 Ga0265338_10000431
268 Ga0265338_10000945
269 Ga0265338_10001734
270 Ga0265338_10002454
271 Ga0265338_10004717
272 Ga0265338_10005285
273 Ga0265338_10005458
274 Ga0265338_10006737
275 Ga0265338_10010592
276 Ga0265338_10017177
277 Ga0265338_10021436
278 Ga0265338_10036997
279 Ga0265338_10040618
280 Ga0265338_10045455
281 Ga0265338_10051224
282 Ga0265338_10065668
283 Ga0265324_10000064
284 Ga0265324_10000247
285 Ga0265324_10009434
286 Ga0265324_10016468
287 Ga0265324_10031689
288 Ga0265332_10032570
289 Ga0265320_10000340
290 Ga0265320_10001146
291 Ga0265320_10013802
292 Ga0265320_10035485
293 Ga0265325_10017005
294 Ga0265340_10001303
295 Ga0265340_10014367
296 Ga0265339_10006038
297 Ga0265339_10033901
298 Ga0265327_10000981
299 Ga0265327_10006796
300 Ga0265327_10018037
301 Ga0265327_10030715
302 Ga0265327_10060095
303 Ga0265316_10007786
304 Ga0265316_10022839
305 Ga0265316_10048517
306 Ga0265316_10054815
307 Ga0265316_10067487
308 Ga0265316_10203639
309 Ga0265313_10034966
310 Ga0265314_10000241
311 Ga0265314_10065773
312 Ga0265342_10044967
313 Ga0265342_10076951
314 Ga0316576_10121442
315 Ga0316577_10053911
316 Ga0373938_0005303
317 Ga0373928_0000376
318 Ga0373929_0000665
319 Ga0373944_0000149
320 Ga0373951_0002189
321 Ga0373932_0000001
322 Ga0373962_0000165
323 Ga0373931_0000008
324 Ga0373931_0034406
325 Ga0373927_0009764
326 Ga0373927_0011382
327 Ga0373927_0051812
328 Ga0373947_0018524
329 Ga0373937_0002350
330 Ga0373925_0000158
331 Ga0373925_0009994
332 Ga0373925_0050477
333 Ga0451577_0000910
334 Ga0451577_0009483
335 Ga0451577_0014539
336 Ga0453684_0001863
337 Ga0453684_0002669
338 Ga0453684_0037008
339 Ga0453684_0155478
340 Ga0453684_0172876
341 Ga0453684_0313873
342 Ga0451576_0044791
343 Ga0451576_0062316
344 Ga0451576_0082350
345 Ga0451576_0130752
346 Ga0495629_0031475
347 Ga0495641_0035544
348 Ga0495639_0047481
349 Ga0495664_0005625
350 Ga0495594_0118341
351 Ga0495618_0000831
352 Ga0495618_0000893
353 Ga0495628_0000139
354 Ga0495630_0000135
355 Ga0495630_0012432
356 Ga0495630_0012668
357 Ga0495630_0024313
358 Ga0495666_0004427
359 Ga0495652_0062344
360 Ga0495652_0192647
361 Ga0495640_0004889
362 Ga0495640_0030672
363 Ga0495586_0000033
364 Ga0495586_0000302
365 Ga0495586_0001252
366 Ga0495586_0007961
367 Ga0495586_0008828
368 Ga0495587_0114534
369 Ga0495645_0002637
370 Ga0495645_0065862
371 Ga0495622_0042158
372 Ga0495634_0001690
373 Ga0495635_0047448
374 Ga0495599_0032258
375 Ga0495658_0051235
376 Ga0495658_0085929
377 Ga0495613_0003132
378 Ga0495613_0075990
379 Ga0495624_0061446
380 Ga0495581_0015615
381 Ga0495674_0006026
382 Ga0495674_0023344
383 Ga0495676_0005720
384 Ga0495676_0133682
385 Ga0495684_0152014
386 Ga0496115_0005903
387 Ga0501031_0000113
388 Ga0501032_0001671
389 Ga0501032_0038529
390 Ga0501033_0007112
391 Ga0501033_0019450
392 Ga0501033_0041448
393 Ga0501034_0084495
394 Ga0501043_0035044
395 Ga0501047_0182147
396 Ga0501080_0056315
397 Ga0501035_0003627
398 Ga0501035_0078614
399 Ga0501044_0000792
400 Ga0501044_0011974
401 nmdc:mga09592_30814_c1
402 nmdc:mga08y16_138479_c1
403 Ga0495601_0022947
404 Ga0500650_0009936

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

145

312

0.99

PF02954

HTH_8

Bacterial regulatory protein, Fis family

409

435

0.94

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

146

316

0.94

PF00072

Response_reg

Response regulator receiver domain

7

117

0.93

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

169

306

0.79

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

142

297

0.78

PF07728

AAA_5

AAA domain (dynein-related subfamily)

168

299

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l5e-assembly1.cif.gz_A-2 crystal structure of a. aeolicus ntrc1 dna binding domain 0.9829 405 448
4bs1-assembly1.cif.gz_A-1 mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition 0.9729 319 386
6jdi-assembly1.cif.gz_A central domain of fleq h287n mutant in complex with atpgs and mg 0.9542 145 390
6luf-assembly4.cif.gz_D trans-acting mutant y290a of the central aaa+ domain of the flagellar regulatory protein flrc 0.953 145 387
5ep2-assembly1.cif.gz_A quorum-sensing signal integrator luxo - catalytic domain in complex with azau inhibitor 0.9527 146 390
ID Description Score Start End Superfamily
4l5eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9868 405 448 1.10.10.60
af_Q06065_316_382_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9803 316 381 1.10.8.60
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9801 145 313 3.40.50.300
1ny5B03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9747 319 385 1.10.8.60
1ojlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9708 145 314 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A661QWG1-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9697 211 374 GO:0005524
GO:0006355
AF-A0A357EWP5-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.964 141 367 GO:0005524
GO:0006355
GO:0016887
AF-F3CKM8-F1-model_v4 Sigma-54 dependent transcriptional regulator 0.958 145 283 GO:0000160
GO:0005524
GO:0006355
GO:0016887
AF-A0A658NQ11-F1-model_v4 Response regulator 0.9552 30 104 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A4Q3XXC0-F1-model_v4 Phage shock protein operon transcriptional activator 0.955 145 380 GO:0005524
GO:0006355
GO:0016887

Map