F309806

General Info

Members Datasets Scaffolds Average Seq Length
202 123 201 327

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10144340|Ga0105248_101443403
Length 372
Sequence LFDRPDILRGDQACLYPSEELAHHGERNVNGEAMGCKVSKMKLDYGNAVSDVLTSVVNSLQFKGKVFCFSKFTAPWAIKMQRKEFAYFHFIQSGNAWIEIEDTGARANVSSGDFVILPHGLPHILADSSEANAVNVEQLLVCRDVLTLKHGGGGPETTTVCGAFTFENQTGNPILPLLPDLIHVPHEKSERGTWLESTLKLLAYEAQFPKEGSGSIIGHVTGIIFVQAVREWIATQAQGQGGWLGALRDKQIGAALSLIHQKPSVPWTIARLASEVGMSRSPFATKFSALVGEPPLAYLTKWRMNLAAAQLRNDQLSIREIAELVGYESQASFTNAFKRTFSLSPREYKEKHKPVISPSVTQSASAGVTFTN

Samples

Sample ID Description Type Environment
1 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
87 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
109 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
110 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
111 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
112 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
113 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
118 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
119 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
120 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
121 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
122 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.5
Metatranscriptomes 0
Isolates 0.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.95
Nodule 0
Rhizoplane 4.95
Rhizosphere 88.12
Stem 0
Stem Tuber 0
Unclassified 1.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1013591 3300001977 Bacteria 1182
2 JGI25406J46586_10004509 3300003203 Bacteria 6481
3 JGI25407J50210_10004095 3300003373 Bacteria 3540
4 JGI25407J50210_10009627 3300003373 Bacteria 2451
5 JGI25407J50210_10010381 3300003373 Bacteria 2369
6 Ga0070683_100083839 3300005329 Bacteria 2986
7 Ga0068869_100106158 3300005334 Bacteria 2131
8 Ga0068868_100089333 3300005338 Bacteria 2480
9 Ga0070671_100052802 3300005355 Bacteria 3379
10 Ga0070659_100449224 3300005366 Bacteria 1093
11 Ga0070705_100010928 3300005440 Bacteria 4561
12 Ga0070705_100226234 3300005440 Unclassified 1298
13 Ga0070700_100001294 3300005441 Bacteria 12434
14 Ga0070663_100135007 3300005455 Bacteria 1878
15 Ga0070678_100086019 3300005456 Bacteria 2397
16 Ga0068867_100083765 3300005459 Bacteria 2408
17 Ga0070685_10020126 3300005466 Bacteria 3610
18 Ga0070706_100008033 3300005467 Bacteria 9845
19 Ga0070707_100201807 3300005468 Bacteria 1938
20 Ga0070699_100360442 3300005518 Bacteria 1311
21 Ga0068855_100022668 3300005563 Bacteria 7524
22 Ga0070664_100138592 3300005564 Bacteria 2141
23 Ga0068856_100006146 3300005614 Bacteria 11781
24 Ga0068852_100153375 3300005616 Bacteria 2144
25 Ga0068863_100103323 3300005841 Bacteria 2710
26 Ga0081538_10000559 3300005981 Bacteria 41262
27 Ga0081538_10001042 3300005981 Bacteria 29561
28 Ga0081538_10003169 3300005981 Bacteria 15643
29 Ga0081538_10008913 3300005981 Bacteria 8433
30 Ga0081538_10012861 3300005981 Bacteria 6675
31 Ga0081538_10038983 3300005981 Unclassified 3054
32 Ga0081539_10001771 3300005985 Bacteria 34417
33 Ga0070712_100003723 3300006175 Bacteria 9389
34 Ga0075367_10043092 3300006178 Bacteria 2643
35 Ga0075367_10049003 3300006178 Bacteria 2489
36 Ga0075428_100060043 3300006844 Bacteria 4163
37 Ga0075428_100093098 3300006844 Bacteria 3285
38 Ga0075428_100189441 3300006844 Bacteria 2225
39 Ga0075430_100006226 3300006846 Bacteria 10066
40 Ga0075430_100139027 3300006846 Unclassified 2022
41 Ga0075431_100009050 3300006847 Bacteria 9985
42 Ga0075431_100012288 3300006847 Bacteria 8640
43 Ga0075431_100020805 3300006847 Bacteria 6705
44 Ga0075431_100034006 3300006847 Bacteria 5253
45 Ga0075431_100044785 3300006847 Bacteria 4562
46 Ga0075431_100100868 3300006847 Bacteria 2978
47 Ga0075431_100186258 3300006847 Bacteria 2128
48 Ga0075431_100286714 3300006847 Bacteria 1666
49 Ga0075433_10000222 3300006852 Bacteria 32444
50 Ga0075433_10102474 3300006852 Bacteria 2535
51 Ga0075433_10225032 3300006852 Bacteria 1666
52 Ga0075433_10378645 3300006852 Bacteria 1249
53 Ga0075434_100044600 3300006871 Bacteria 4398
54 Ga0075434_100083400 3300006871 Bacteria 3194
55 Ga0075434_100109602 3300006871 Bacteria 2771
56 Ga0075434_100138649 3300006871 Bacteria 2452
57 Ga0075434_100195039 3300006871 Bacteria 2045
58 Ga0075434_100264272 3300006871 Bacteria 1740
59 Ga0075434_100281715 3300006871 Bacteria 1682
60 Ga0075434_100298454 3300006871 Bacteria 1631
61 Ga0075429_100153422 3300006880 Bacteria 2017
62 Ga0068865_100030268 3300006881 Bacteria 3600
63 Ga0075436_100053059 3300006914 Bacteria 2798
64 Ga0075436_100097632 3300006914 Bacteria 2044
65 Ga0075436_100245442 3300006914 Bacteria 1274
66 Ga0075435_100011533 3300007076 Bacteria 6508
67 Ga0075435_100057587 3300007076 Bacteria 3144
68 Ga0075435_100110462 3300007076 Unclassified 2286
69 Ga0111539_10023054 3300009094 Bacteria 7645
70 Ga0111539_10053612 3300009094 Bacteria 4801
71 Ga0105245_10004883 3300009098 Bacteria 11796
72 Ga0105245_10063330 3300009098 Unclassified 3339
73 Ga0114129_10009684 3300009147 Bacteria 13748
74 Ga0114129_10051600 3300009147 Bacteria 5774
75 Ga0114129_10061780 3300009147 Bacteria 5236
76 Ga0114129_10071338 3300009147 Bacteria 4844
77 Ga0114129_10392942 3300009147 Bacteria 1829
78 Ga0105243_10016042 3300009148 Bacteria 5667
79 Ga0105243_10208252 3300009148 Bacteria 1720
80 Ga0105241_10065090 3300009174 Bacteria 2816
81 Ga0105241_10134047 3300009174 Bacteria 2009
82 Ga0105248_10144340 3300009177 Unclassified 2686
83 Ga0105238_10154744 3300009551 Bacteria 2268
84 Ga0105249_10046392 3300009553 Bacteria 3954
85 Ga0105239_10074716 3300010375 Bacteria 3726
86 Ga0105239_10105356 3300010375 Bacteria 3123
87 Ga0105246_10006434 3300011119 Bacteria 7177
88 Ga0157371_10124910 3300013102 Bacteria 1830
89 Ga0157372_10086070 3300013307 Bacteria 3566
90 Ga0157375_10170282 3300013308 Bacteria 2325
91 Ga0163163_10089386 3300014325 Bacteria 3092
92 Ga0157377_10010085 3300014745 Bacteria 4663
93 Ga0157379_10548334 3300014968 Bacteria 1076
94 Ga0209051_1011019 3300025303 Bacteria 4508
95 Ga0207692_10171535 3300025898 Bacteria 1257
96 Ga0207688_10002359 3300025901 Bacteria 10157
97 Ga0207684_10000089 3300025910 Bacteria 172593
98 Ga0207684_10002345 3300025910 Bacteria 19179
99 Ga0207693_10021028 3300025915 Bacteria 5187
100 Ga0207646_10061651 3300025922 Bacteria 3347
101 Ga0207687_10062217 3300025927 Bacteria 2639
102 Ga0207706_10006123 3300025933 Bacteria 11175
103 Ga0207686_10083087 3300025934 Bacteria 2095
104 Ga0207704_10004566 3300025938 Bacteria 6336
105 Ga0207689_10117572 3300025942 Bacteria 2186
106 Ga0207661_10083672 3300025944 Bacteria 2641
107 Ga0207667_10031935 3300025949 Bacteria 5679
108 Ga0207712_10137949 3300025961 Bacteria 1868
109 Ga0207703_10107604 3300026035 Bacteria 2374
110 Ga0207639_10004080 3300026041 Bacteria 9852
111 Ga0207639_10198945 3300026041 Bacteria 1717
112 Ga0207678_10014441 3300026067 Bacteria 6944
113 Ga0207708_10000271 3300026075 Bacteria 40456
114 Ga0207674_10022750 3300026116 Bacteria 6726
115 Ga0207675_100007862 3300026118 Bacteria 10062
116 Ga0207698_10206007 3300026142 Bacteria 1765
117 Ga0209983_1001807 3300027665 Bacteria 4755
118 Ga0268264_10159260 3300028381 Bacteria 2032
119 Ga0307412_10008642 3300031911 Bacteria 5822
120 Ga0307414_10417833 3300032004 Bacteria 1169
121 Ga0395900_0185954 3300037418 Bacteria 2109
122 Ga0395900_0221963 3300037418 Bacteria 1904
123 Ga0395900_0248805 3300037418 Bacteria 1780
124 Ga0395898_0042205 3300037466 Bacteria 4502
125 Ga0395898_0056395 3300037466 Bacteria 3829
126 Ga0395905_0340878 3300037471 Unclassified 1390
127 Ga0395901_0005843 3300038443 Bacteria 12449
128 Ga0395901_0242362 3300038443 Bacteria 1880
129 Ga0453683_0152093 3300044673 Bacteria 1462
130 Ga0495630_0169934 3300046517 Bacteria 1661
131 Ga0495631_0075088 3300046518 Bacteria 1459
132 Ga0495667_0195109 3300046559 Bacteria 1297
133 Ga0496100_0089047 3300048903 Bacteria 2102
134 Ga0496101_0128908 3300048904 Bacteria 1919
135 Ga0496102_0201218 3300048905 Bacteria 1877
136 Ga0496104_0041004 3300048907 Bacteria 4340
137 Ga0496104_0211584 3300048907 Bacteria 1850
138 Ga0496105_0026470 3300048908 Bacteria 4731
139 Ga0496109_0029111 3300048912 Bacteria 4944
140 Ga0496110_0125301 3300048913 Bacteria 2317
141 Ga0496112_0004523 3300048915 Bacteria 11811
142 Ga0496113_0198688 3300048916 Bacteria 1593
143 Ga0496124_0129747 3300048927 Bacteria 2004
144 Ga0496124_0180363 3300048927 Bacteria 1626
145 Ga0496125_0022169 3300048928 Bacteria 5902
146 Ga0501036_0083322 3300049572 Bacteria 2703
147 Ga0501040_0155701 3300049576 Bacteria 1614
148 Ga0501041_0091534 3300049577 Bacteria 1878
149 Ga0501048_0086675 3300049582 Bacteria 2209
150 Ga0501072_0073441 3300049588 Bacteria 2704
151 Ga0501076_0036445 3300049592 Bacteria 3854
152 Ga0501076_0307015 3300049592 Unclassified 1301
153 Ga0501079_0230884 3300049741 Bacteria 1445
154 Ga0501080_0249341 3300049742 Bacteria 1619
155 Ga0501035_0140312 3300049822 Bacteria 2102
156 Ga0501045_0202249 3300049824 Bacteria 1480
157 nmdc:mga00v17_138999_c1 3300050491 Bacteria 1556
158 nmdc:mga00v17_37692_c1 3300050491 Bacteria 2888
159 nmdc:mga0k408_63992_c1 3300050493 Bacteria 2140
160 nmdc:mga06z11_65060_c1 3300050494 Bacteria 1913
161 nmdc:mga05p37_141157_c1 3300050507 Bacteria 2952
162 nmdc:mga05p37_189453_c1 3300050507 Bacteria 2498
163 nmdc:mga05p37_385491_c1 3300050507 Unclassified 1641
164 nmdc:mga05p37_753_c1 3300050507 Bacteria 35939
165 nmdc:mga09592_169972_c1 3300050508 Bacteria 1885
166 nmdc:mga0qj67_182770_c1 3300050509 Bacteria 1703
167 nmdc:mga0qj67_6464_c1 3300050509 Bacteria 8613
168 nmdc:mga0qj67_75356_c1 3300050509 Bacteria 2697
169 nmdc:mga06r32_149605_c1 3300050510 Bacteria 2313
170 nmdc:mga06r32_1928_c1 3300050510 Bacteria 18488
171 nmdc:mga06r32_305262_c1 3300050510 Bacteria 1577
172 nmdc:mga06r32_46507_c1 3300050510 Bacteria 4141
173 nmdc:mga06r32_7264_c1 3300050510 Bacteria 9979
174 nmdc:mga08y16_299071_c1 3300050511 Unclassified 1659
175 nmdc:mga08y16_43090_c1 3300050511 Bacteria 4728
176 nmdc:mga0n895_102755_c1 3300050512 Bacteria 2869
177 nmdc:mga0n895_138114_c1 3300050512 Bacteria 2464
178 nmdc:mga0n895_18220_c1 3300050512 Bacteria 6492
179 nmdc:mga0n895_224259_c1 3300050512 Bacteria 1908
180 nmdc:mga0n895_62121_c1 3300050512 Bacteria 3691
181 nmdc:mga0rr50_131978_c1 3300050513 Bacteria 2001
182 nmdc:mga0rr50_135552_c1 3300050513 Unclassified 1976
183 nmdc:mga0rr50_162528_c1 3300050513 Unclassified 1813
184 nmdc:mga0rr50_164662_c1 3300050513 Bacteria 1802
185 nmdc:mga0rr50_347017_c1 3300050513 Bacteria 1248
186 nmdc:mga0rr50_40676_c1 3300050513 Bacteria 3382
187 nmdc:mga08x19_19785_c1 3300050514 Bacteria 4137
188 nmdc:mga08x19_54137_c1 3300050514 Bacteria 2582
189 nmdc:mga0a205_10800_c1 3300050515 Bacteria 8401
190 nmdc:mga0a205_114199_c1 3300050515 Bacteria 2599
191 nmdc:mga0a205_119318_c1 3300050515 Bacteria 2537
192 nmdc:mga0a205_205470_c1 3300050515 Bacteria 1859
193 nmdc:mga0a205_229829_c1 3300050515 Unclassified 1738
194 nmdc:mga0a205_256085_c1 3300050515 Unclassified 1629
195 nmdc:mga0a205_311544_c1 3300050515 Bacteria 1446
196 Ga0500566_0071205 3300053094 Bacteria 1951
197 Ga0500645_015469 3300053730 Bacteria 2416
198 Ga0500599_001992 3300053736 Bacteria 2414
199 Ga0501084_0253937 3300054114 Bacteria 1484
200 Ga0530510_0073473 3300061734 Unclassified 2482
201 Ga0530510_0279116 3300061734 Bacteria 1248

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050509 nmdc:mga0qj67_182770_c1 nmdc:mga0qj67_182770_c1_875_1657 252
2 3300027665 Ga0209983_1001807 Ga0209983_10018073 281
3 3300005467 Ga0070706_100008033 Ga0070706_1000080331 282
4 3300005518 Ga0070699_100360442 Ga0070699_1003604421 282
5 3300025910 Ga0207684_10002345 Ga0207684_1000234522 282
6 3300050513 nmdc:mga0rr50_347017_c1 nmdc:mga0rr50_347017_c1_329_1189 284
7 3300007076 Ga0075435_100057587 Ga0075435_1000575872 289
8 3300050513 nmdc:mga0rr50_135552_c1 nmdc:mga0rr50_135552_c1_345_1364 289
9 3300050515 nmdc:mga0a205_256085_c1 nmdc:mga0a205_256085_c1_491_1510 289
10 3300014968 Ga0157379_10548334 Ga0157379_105483341 295
11 3300038443 Ga0395901_0242362 Ga0395901_0242362_668_1597 295
12 3300006847 Ga0075431_100286714 Ga0075431_1002867141 297
13 3300006871 Ga0075434_100083400 Ga0075434_1000834003 297
14 3300037418 Ga0395900_0221963 Ga0395900_0221963_898_1803 297
15 3300037466 Ga0395898_0042205 Ga0395898_0042205_3504_4409 297
16 3300006914 Ga0075436_100097632 Ga0075436_1000976322 299
17 3300050513 nmdc:mga0rr50_131978_c1 nmdc:mga0rr50_131978_c1_876_1931 299
18 3300050514 nmdc:mga08x19_54137_c1 nmdc:mga08x19_54137_c1_480_1463 299
19 3300050515 nmdc:mga0a205_119318_c1 nmdc:mga0a205_119318_c1_774_1829 299
20 3300009147 Ga0114129_10071338 Ga0114129_100713382 300
21 3300005981 Ga0081538_10001042 Ga0081538_1000104233 304
22 3300006178 Ga0075367_10043092 Ga0075367_100430922 304
23 3300009551 Ga0105238_10154744 Ga0105238_101547442 304
24 3300010375 Ga0105239_10074716 Ga0105239_100747165 304
25 3300026041 Ga0207639_10198945 Ga0207639_101989452 304
26 3300048927 Ga0496124_0129747 Ga0496124_0129747_269_1225 304
27 3300048928 Ga0496125_0022169 Ga0496125_0022169_730_1686 304
28 3300049572 Ga0501036_0083322 Ga0501036_0083322_88_1110 304
29 3300049576 Ga0501040_0155701 Ga0501040_0155701_359_1381 304
30 3300049582 Ga0501048_0086675 Ga0501048_0086675_119_1141 304
31 3300049592 Ga0501076_0036445 Ga0501076_0036445_2345_3367 304
32 3300049822 Ga0501035_0140312 Ga0501035_0140312_243_1265 304
33 3300049824 Ga0501045_0202249 Ga0501045_0202249_141_1163 304
34 3300050493 nmdc:mga0k408_63992_c1 nmdc:mga0k408_63992_c1_1132_2088 304
35 3300050494 nmdc:mga06z11_65060_c1 nmdc:mga06z11_65060_c1_848_1804 304
36 3300053730 Ga0500645_015469 Ga0500645_015469_987_1943 304
37 3300006846 Ga0075430_100006226 Ga0075430_1000062269 305
38 3300006847 Ga0075431_100034006 Ga0075431_1000340066 305
39 3300006880 Ga0075429_100153422 Ga0075429_1001534222 305
40 3300037466 Ga0395898_0056395 Ga0395898_0056395_2091_3011 305
41 3300038443 Ga0395901_0005843 Ga0395901_0005843_3395_4315 305
42 3300050507 nmdc:mga05p37_189453_c1 nmdc:mga05p37_189453_c1_338_1321 305
43 3300050508 nmdc:mga09592_169972_c1 nmdc:mga09592_169972_c1_199_1182 305
44 3300050509 nmdc:mga0qj67_6464_c1 nmdc:mga0qj67_6464_c1_2835_3818 305
45 3300050510 nmdc:mga06r32_46507_c1 nmdc:mga06r32_46507_c1_2144_3127 305
46 3300031911 Ga0307412_10008642 Ga0307412_100086424 306
47 3300003373 JGI25407J50210_10009627 JGI25407J50210_100096272 307
48 3300005981 Ga0081538_10008913 Ga0081538_100089139 307
49 3300032004 Ga0307414_10417833 Ga0307414_104178332 307
50 3300025910 Ga0207684_10000089 Ga0207684_10000089118 309
51 3300037418 Ga0395900_0248805 Ga0395900_0248805_401_1372 309
52 3300005440 Ga0070705_100226234 Ga0070705_1002262342 310
53 3300005468 Ga0070707_100201807 Ga0070707_1002018072 310
54 3300006847 Ga0075431_100100868 Ga0075431_1001008683 310
55 3300006871 Ga0075434_100281715 Ga0075434_1002817152 310
56 3300009174 Ga0105241_10134047 Ga0105241_101340471 310
57 3300025922 Ga0207646_10061651 Ga0207646_100616514 310
58 3300050515 nmdc:mga0a205_229829_c1 nmdc:mga0a205_229829_c1_716_1672 310
59 3300005981 Ga0081538_10038983 Ga0081538_100389834 311
60 3300006844 Ga0075428_100093098 Ga0075428_1000930982 311
61 3300006847 Ga0075431_100012288 Ga0075431_1000122883 311
62 3300006847 Ga0075431_100186258 Ga0075431_1001862583 311
63 3300009098 Ga0105245_10063330 Ga0105245_100633303 311
64 3300009147 Ga0114129_10061780 Ga0114129_100617802 311
65 3300009148 Ga0105243_10016042 Ga0105243_100160425 311
66 3300013102 Ga0157371_10124910 Ga0157371_101249102 311
67 3300014325 Ga0163163_10089386 Ga0163163_100893862 311
68 3300025927 Ga0207687_10062217 Ga0207687_100622171 311
69 3300025933 Ga0207706_10006123 Ga0207706_100061236 311
70 3300025934 Ga0207686_10083087 Ga0207686_100830872 311
71 3300026118 Ga0207675_100007862 Ga0207675_1000078624 311
72 3300037471 Ga0395905_0340878 Ga0395905_0340878_292_1245 311
73 3300044673 Ga0453683_0152093 Ga0453683_0152093_132_1103 311
74 3300050507 nmdc:mga05p37_385491_c1 nmdc:mga05p37_385491_c1_325_1281 311
75 3300050510 nmdc:mga06r32_1928_c1 nmdc:mga06r32_1928_c1_16562_17518 311
76 3300050512 nmdc:mga0n895_18220_c1 nmdc:mga0n895_18220_c1_3501_4454 311
77 3300053736 Ga0500599_001992 Ga0500599_001992_1159_2094 311
78 3300006178 Ga0075367_10049003 Ga0075367_100490032 312
79 3300005563 Ga0068855_100022668 Ga0068855_1000226683 313
80 3300025303 Ga0209051_1011019 Ga0209051_10110192 313
81 3300025949 Ga0207667_10031935 Ga0207667_100319351 313
82 3300026041 Ga0207639_10004080 Ga0207639_100040809 313
83 3300026116 Ga0207674_10022750 Ga0207674_100227505 313
84 3300048927 Ga0496124_0180363 Ga0496124_0180363_401_1381 313
85 3300050491 nmdc:mga00v17_37692_c1 nmdc:mga00v17_37692_c1_1026_1991 313
86 3300050510 nmdc:mga06r32_305262_c1 nmdc:mga06r32_305262_c1_77_1075 313
87 3300050513 nmdc:mga0rr50_162528_c1 nmdc:mga0rr50_162528_c1_677_1690 313
88 3300006847 Ga0075431_100044785 Ga0075431_1000447857 314
89 3300006852 Ga0075433_10225032 Ga0075433_102250322 314
90 3300006871 Ga0075434_100195039 Ga0075434_1001950391 314
91 3300007076 Ga0075435_100011533 Ga0075435_1000115332 314
92 3300009094 Ga0111539_10053612 Ga0111539_100536126 314
93 3300050511 nmdc:mga08y16_299071_c1 nmdc:mga08y16_299071_c1_43_1080 314
94 3300050513 nmdc:mga0rr50_164662_c1 nmdc:mga0rr50_164662_c1_25_984 314
95 3300050515 nmdc:mga0a205_205470_c1 nmdc:mga0a205_205470_c1_118_1077 314
96 3300005459 Ga0068867_100083765 Ga0068867_1000837651 316
97 3300006852 Ga0075433_10000222 Ga0075433_100002225 316
98 3300006871 Ga0075434_100109602 Ga0075434_1001096022 316
99 3300006914 Ga0075436_100053059 Ga0075436_1000530594 316
100 3300007076 Ga0075435_100110462 Ga0075435_1001104621 316
101 3300050507 nmdc:mga05p37_753_c1 nmdc:mga05p37_753_c1_31589_32605 316
102 3300050512 nmdc:mga0n895_62121_c1 nmdc:mga0n895_62121_c1_1183_2199 316
103 3300050513 nmdc:mga0rr50_40676_c1 nmdc:mga0rr50_40676_c1_649_1665 316
104 3300050514 nmdc:mga08x19_19785_c1 nmdc:mga08x19_19785_c1_953_1969 316
105 3300050515 nmdc:mga0a205_10800_c1 nmdc:mga0a205_10800_c1_2490_3506 316
106 3300028381 Ga0268264_10159260 Ga0268264_101592602 317
107 iso_pu_bacteria 2738543034 2739366805 317
108 3300006871 Ga0075434_100264272 Ga0075434_1002642721 318
109 3300053094 Ga0500566_0071205 Ga0500566_0071205_463_1467 318
110 3300050491 nmdc:mga00v17_138999_c1 nmdc:mga00v17_138999_c1_287_1246 319
111 3300003203 JGI25406J46586_10004509 JGI25406J46586_100045094 320
112 3300005985 Ga0081539_10001771 Ga0081539_100017714 320
113 3300061734 Ga0530510_0073473 Ga0530510_0073473_64_1176 320
114 3300006871 Ga0075434_100298454 Ga0075434_1002984541 322
115 3300046518 Ga0495631_0075088 Ga0495631_0075088_248_1237 322
116 3300049592 Ga0501076_0307015 Ga0501076_0307015_188_1159 322
117 3300049741 Ga0501079_0230884 Ga0501079_0230884_303_1274 322
118 3300049742 Ga0501080_0249341 Ga0501080_0249341_561_1532 322
119 3300050512 nmdc:mga0n895_102755_c1 nmdc:mga0n895_102755_c1_640_1671 322
120 3300054114 Ga0501084_0253937 Ga0501084_0253937_416_1387 322
121 3300061734 Ga0530510_0279116 Ga0530510_0279116_178_1149 322
122 3300006844 Ga0075428_100060043 Ga0075428_1000600431 323
123 3300006846 Ga0075430_100139027 Ga0075430_1001390272 323
124 3300006847 Ga0075431_100009050 Ga0075431_10000905013 323
125 3300006852 Ga0075433_10102474 Ga0075433_101024743 323
126 3300009147 Ga0114129_10009684 Ga0114129_100096846 323
127 3300009147 Ga0114129_10392942 Ga0114129_103929421 323
128 3300025938 Ga0207704_10004566 Ga0207704_100045665 323
129 3300050507 nmdc:mga05p37_141157_c1 nmdc:mga05p37_141157_c1_1505_2560 323
130 3300050509 nmdc:mga0qj67_75356_c1 nmdc:mga0qj67_75356_c1_659_1708 323
131 3300050510 nmdc:mga06r32_7264_c1 nmdc:mga06r32_7264_c1_8681_9730 323
132 3300050515 nmdc:mga0a205_311544_c1 nmdc:mga0a205_311544_c1_214_1257 323
133 3300005981 Ga0081538_10000559 Ga0081538_1000055940 325
134 3300006852 Ga0075433_10378645 Ga0075433_103786451 325
135 3300003373 JGI25407J50210_10004095 JGI25407J50210_100040952 326
136 3300005466 Ga0070685_10020126 Ga0070685_100201263 326
137 3300005981 Ga0081538_10012861 Ga0081538_100128617 326
138 3300009098 Ga0105245_10004883 Ga0105245_100048839 326
139 3300009148 Ga0105243_10208252 Ga0105243_102082522 326
140 3300009174 Ga0105241_10065090 Ga0105241_100650902 326
141 3300009553 Ga0105249_10046392 Ga0105249_100463925 326
142 3300010375 Ga0105239_10105356 Ga0105239_101053562 326
143 3300011119 Ga0105246_10006434 Ga0105246_100064342 326
144 3300013307 Ga0157372_10086070 Ga0157372_100860704 326
145 3300013308 Ga0157375_10170282 Ga0157375_101702823 326
146 3300014745 Ga0157377_10010085 Ga0157377_100100851 326
147 3300025898 Ga0207692_10171535 Ga0207692_101715352 326
148 3300037418 Ga0395900_0185954 Ga0395900_0185954_557_1552 326
149 3300048903 Ga0496100_0089047 Ga0496100_0089047_317_1297 326
150 3300048904 Ga0496101_0128908 Ga0496101_0128908_50_1030 326
151 3300048905 Ga0496102_0201218 Ga0496102_0201218_448_1428 326
152 3300048907 Ga0496104_0211584 Ga0496104_0211584_23_1003 326
153 3300048908 Ga0496105_0026470 Ga0496105_0026470_3519_4499 326
154 3300048912 Ga0496109_0029111 Ga0496109_0029111_2645_3625 326
155 3300048913 Ga0496110_0125301 Ga0496110_0125301_846_1826 326
156 3300048915 Ga0496112_0004523 Ga0496112_0004523_10573_11553 326
157 3300048916 Ga0496113_0198688 Ga0496113_0198688_440_1420 326
158 3300049577 Ga0501041_0091534 Ga0501041_0091534_680_1702 326
159 3300049588 Ga0501072_0073441 Ga0501072_0073441_1210_2196 326
160 3300050512 nmdc:mga0n895_138114_c1 nmdc:mga0n895_138114_c1_152_1132 326
161 3300005981 Ga0081538_10003169 Ga0081538_100031695 329
162 3300006847 Ga0075431_100020805 Ga0075431_1000208055 332
163 3300050515 nmdc:mga0a205_114199_c1 nmdc:mga0a205_114199_c1_365_1369 332
164 3300048907 Ga0496104_0041004 Ga0496104_0041004_1795_2823 335
165 3300009177 Ga0105248_10144340 Ga0105248_101443403 336
166 3300005366 Ga0070659_100449224 Ga0070659_1004492241 337
167 3300005564 Ga0070664_100138592 Ga0070664_1001385923 337
168 3300005616 Ga0068852_100153375 Ga0068852_1001533751 337
169 3300005841 Ga0068863_100103323 Ga0068863_1001033232 337
170 3300006175 Ga0070712_100003723 Ga0070712_1000037232 337
171 3300006871 Ga0075434_100138649 Ga0075434_1001386491 337
172 3300006881 Ga0068865_100030268 Ga0068865_1000302684 337
173 3300025915 Ga0207693_10021028 Ga0207693_100210285 337
174 3300025942 Ga0207689_10117572 Ga0207689_101175721 337
175 3300025944 Ga0207661_10083672 Ga0207661_100836723 337
176 3300025961 Ga0207712_10137949 Ga0207712_101379492 337
177 3300026075 Ga0207708_10000271 Ga0207708_100002711 337
178 3300026142 Ga0207698_10206007 Ga0207698_102060072 337
179 3300050510 nmdc:mga06r32_149605_c1 nmdc:mga06r32_149605_c1_139_1161 338
180 3300050511 nmdc:mga08y16_43090_c1 nmdc:mga08y16_43090_c1_2363_3385 338
181 3300050512 nmdc:mga0n895_224259_c1 nmdc:mga0n895_224259_c1_127_1149 338
182 3300003373 JGI25407J50210_10010381 JGI25407J50210_100103812 344
183 3300046517 Ga0495630_0169934 Ga0495630_0169934_196_1233 344
184 3300046559 Ga0495667_0195109 Ga0495667_0195109_212_1249 344
185 3300001977 JGI24746J21847_1013591 JGI24746J21847_10135911 345
186 3300005329 Ga0070683_100083839 Ga0070683_1000838391 345
187 3300005334 Ga0068869_100106158 Ga0068869_1001061581 345
188 3300005338 Ga0068868_100089333 Ga0068868_1000893331 345
189 3300005355 Ga0070671_100052802 Ga0070671_1000528022 345
190 3300005440 Ga0070705_100010928 Ga0070705_1000109283 345
191 3300005441 Ga0070700_100001294 Ga0070700_1000012941 345
192 3300005455 Ga0070663_100135007 Ga0070663_1001350072 345
193 3300005456 Ga0070678_100086019 Ga0070678_1000860193 345
194 3300005614 Ga0068856_100006146 Ga0068856_10000614611 345
195 3300006844 Ga0075428_100189441 Ga0075428_1001894412 345
196 3300006871 Ga0075434_100044600 Ga0075434_1000446005 345
197 3300006914 Ga0075436_100245442 Ga0075436_1002454422 345
198 3300009094 Ga0111539_10023054 Ga0111539_100230544 345
199 3300009147 Ga0114129_10051600 Ga0114129_100516005 345
200 3300025901 Ga0207688_10002359 Ga0207688_100023596 345
201 3300026035 Ga0207703_10107604 Ga0207703_101076042 345
202 3300026067 Ga0207678_10014441 Ga0207678_100144416 345

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

272

351

0.98

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

311

348

0.95

PF12852

Cupin_6

Cupin

51

234

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.9293 230 332
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9074 232 338
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9028 236 330
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.9014 227 337
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8983 236 320
ID Description Score Start End Superfamily
1xs9A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9512 287 331 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.946 233 335 1.10.10.60
af_P31449_179_288_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9418 230 334 1.10.10.60
af_P0A9E0_176_235_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9259 230 285 1.10.10.60
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9235 284 331 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7X0Q335-F1-model_v4 deleted 0.9502 232 334
AF-A0A318ABT8-F1-model_v4 deleted 0.9419 230 337
AF-A0A847B1N9-F1-model_v4 AraC family transcriptional regulator 0.9413 232 333 GO:0003700
GO:0043565
AF-A0A239B962-F1-model_v4 Transcriptional regulator, AraC family 0.9397 232 337 GO:0003700
GO:0043565
AF-A0A484XH48-F1-model_v4 AraC family transcriptional regulator 0.9395 232 333 GO:0003700
GO:0043565

Feature Viewer

pLDDT pTM Quality
85.85 0.8 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map