F309667

General Info

Members Datasets Scaffolds Average Seq Length
202 134 402 479

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10006187|Ga0081539_1000618710
Length 514
Sequence MEDRLEPSRSTGRSAPGHALVEGVAVDTRHWIGGRRVASAAGFGDVSPVDEQVIAEVSAGGPAEVDAAVGAARTAFPAWAALPVAERAAVLRRVADGIEARVEDLARVETRDNGSLLRSHRRSVMPRVAANFRFFADFAEKELGHPDLEVRGHRERVTYDPAGVVAVITPWNAPLMLATWRIGPALATGDTVVLKPPEWAPLTASLLADVTDEAGLPPGVLNVVQGTGPGAGAPLAAHPGVDRIAFTGSVPTAGRIAAAAAPNVVPLSFELGGKSPLLVFADADLDLAVDLVVEQFDNAGQVCLAAVRVLVQEDVADELLRRVVERAGRLRQGDPRDPATDVGPLVGRAHFERVSGFVERALRDGARPVLGGGPNRELGGLHFAPTILRDAPPGSEILTEEVFGPVLTVQTFAGEAQAVAMANDTAYGLAATVVTGDRARAERVSGRLRAGTVWVNCFFVRDLAAPFGGSGRSGIGREGGAWSFDFYCDVKNSVFAPAGWTGDDPTTGEAGRHG

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
66 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
67 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
70 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
71 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
74 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
86 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
87 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
106 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
116 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
117 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
123 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
124 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 2558860280 Kutzneria sp. 744 Isolate Unclassified
127 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
128 2687453737 Frankia sp. BMG5.36 Isolate Nodule
129 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
130 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
131 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
132 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
133 2891562705 Microbispora tritici MT50 Isolate Unclassified
134 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.05
Metatranscriptomes 0.5
Isolates 4.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.46
Nodule 0.5
Rhizoplane 2.97
Rhizosphere 85.64
Stem 0
Stem Tuber 0
Unclassified 1.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10006187 3300005985 Bacteria 11631
2 SwRhRL2b_contig_3113853 2162886007 Bacteria 3760
3 JGI25406J46586_10002971 3300003203 Bacteria 8004
4 JGI25406J46586_10018989 3300003203 Bacteria 2812
5 Ga0065704_10002812 3300005289 Bacteria 5182
6 Ga0065707_10000715 3300005295 Bacteria 12740
7 Ga0065707_10084149 3300005295 Bacteria 7616
8 Ga0070689_100058443 3300005340 Bacteria 2995
9 Ga0070674_100032616 3300005356 Bacteria 3460
10 Ga0070708_100005852 3300005445 Bacteria 9766
11 Ga0070681_10116398 3300005458 Bacteria 2610
12 Ga0070707_100004651 3300005468 Bacteria 12847
13 Ga0070707_100059601 3300005468 Bacteria 3661
14 Ga0070707_100099244 3300005468 Unclassified 2821
15 Ga0070699_100008428 3300005518 Bacteria 8931
16 Ga0070699_100014827 3300005518 Bacteria 6701
17 Ga0070699_100127184 3300005518 Bacteria 2244
18 Ga0070697_100147786 3300005536 Bacteria 1979
19 Ga0070696_100010007 3300005546 Bacteria 6343
20 Ga0070704_100053177 3300005549 Bacteria 2861
21 Ga0068859_100130373 3300005617 Bacteria 2585
22 Ga0068862_100031944 3300005844 Bacteria 4448
23 Ga0081540_1007040 3300005983 Bacteria 8086
24 Ga0081539_10001241 3300005985 Bacteria 45361
25 Ga0081539_10001466 3300005985 Bacteria 40007
26 Ga0081539_10017161 3300005985 Bacteria 5101
27 Ga0081539_10030035 3300005985 Bacteria 3383
28 Ga0070717_10000009 3300006028 Bacteria 297183
29 Ga0070717_10010361 3300006028 Bacteria 7034
30 Ga0075365_10000417 3300006038 Bacteria 15685
31 Ga0075368_10000795 3300006042 Bacteria 9693
32 Ga0075363_100000220 3300006048 Bacteria 15874
33 Ga0075367_10005864 3300006178 Bacteria 6155
34 Ga0075428_100026088 3300006844 Bacteria 6470
35 Ga0075428_100032585 3300006844 Bacteria 5756
36 Ga0075430_100065763 3300006846 Bacteria 3045
37 Ga0075431_100019927 3300006847 Bacteria 6849
38 Ga0075431_100044888 3300006847 Unclassified 4557
39 Ga0075433_10006015 3300006852 Bacteria 9560
40 Ga0075434_100214197 3300006871 Bacteria 1946
41 Ga0075429_100007994 3300006880 Bacteria 9186
42 Ga0075429_100039303 3300006880 Bacteria 4118
43 Ga0075429_100254714 3300006880 Bacteria 1537
44 Ga0097620_100130374 3300006931 Bacteria 2585
45 Ga0111539_10214302 3300009094 Bacteria 2243
46 Ga0114129_10020283 3300009147 Bacteria 9459
47 Ga0114129_10027689 3300009147 Bacteria 8024
48 Ga0114129_10028474 3300009147 Bacteria 7916
49 Ga0114129_10119776 3300009147 Bacteria 3625
50 Ga0114129_10133547 3300009147 Unclassified 3407
51 Ga0114129_10190693 3300009147 Bacteria 2783
52 Ga0105243_10069748 3300009148 Bacteria 2836
53 Ga0105243_10120519 3300009148 Bacteria 2211
54 Ga0105246_10050129 3300011119 Bacteria 2863
55 Ga0157369_10009205 3300013105 Bacteria 11301
56 Ga0157372_10017120 3300013307 Bacteria 7780
57 Ga0157375_10046645 3300013308 Bacteria 4227
58 Ga0157375_10178758 3300013308 Bacteria 2273
59 Ga0206353_11626406 3300020082 Bacteria 5103
60 Ga0213875_10032842 3300021388 Bacteria 2451
61 Ga0207684_10208105 3300025910 Bacteria 1687
62 Ga0207646_10023560 3300025922 Bacteria 5652
63 Ga0207646_10117547 3300025922 Bacteria 2388
64 Ga0207646_10247830 3300025922 Bacteria 1609
65 Ga0207690_10122824 3300025932 Bacteria 1889
66 Ga0207709_10060097 3300025935 Bacteria 2368
67 Ga0207665_10068087 3300025939 Bacteria 2425
68 Ga0207708_10148672 3300026075 Bacteria 1842
69 Ga0207698_10205655 3300026142 Bacteria 1767
70 Ga0209813_10001348 3300027866 Bacteria 5504
71 Ga0265340_10028233 3300031247 Bacteria 2824
72 Ga0265340_10031497 3300031247 Bacteria 2651
73 Ga0265331_10040713 3300031250 Bacteria 2260
74 Ga0265316_10005374 3300031344 Bacteria 12463
75 Ga0265313_10005930 3300031595 Bacteria 8842
76 Ga0265313_10008452 3300031595 Bacteria 6831
77 Ga0265313_10011125 3300031595 Bacteria 5612
78 Ga0316575_10000489 3300031665 Bacteria 11492
79 Ga0265314_10120114 3300031711 Bacteria 1656
80 Ga0316576_10006130 3300031727 Bacteria 7447
81 Ga0316576_10014610 3300031727 Bacteria 5247
82 Ga0316576_10028397 3300031727 Bacteria 3943
83 Ga0316578_10001436 3300031728 Bacteria 9662
84 Ga0316578_10023227 3300031728 Bacteria 3469
85 Ga0307516_10076064 3300031730 Bacteria 3210
86 Ga0307413_10109547 3300031824 Bacteria 1846
87 Ga0307412_10046961 3300031911 Bacteria 2833
88 Ga0307416_100265642 3300032002 Bacteria 1681
89 Ga0373942_0001203 3300035207 Bacteria 6824
90 Ga0316574_0000528 3300035398 Bacteria 15671
91 Ga0316574_0009085 3300035398 Bacteria 5555
92 Ga0316574_0009641 3300035398 Bacteria 5419
93 Ga0316574_0022196 3300035398 Bacteria 3778
94 Ga0316582_0006170 3300036647 Bacteria 6260
95 Ga0316584_0003257 3300036712 Bacteria 10504
96 Ga0316584_0010303 3300036712 Bacteria 6530
97 Ga0395900_0136506 3300037418 Bacteria 2513
98 Ga0395900_0208161 3300037418 Bacteria 1976
99 Ga0395905_0124966 3300037471 Bacteria 2419
100 Ga0436363_1711700 3300039450 Bacteria 1399
101 Ga0451853_2885194 3300041512 Bacteria 1962
102 Ga0439442_011003 3300042002 Bacteria 1838
103 Ga0466972_0007483 3300044658 Bacteria 5486
104 Ga0466972_0076147 3300044658 Bacteria 1598
105 Ga0466977_0001549 3300044666 Bacteria 9615
106 Ga0453683_0047329 3300044673 Bacteria 2696
107 Ga0466965_0002364 3300044683 Bacteria 7990
108 Ga0466963_0072770 3300044694 Bacteria 2316
109 Ga0466968_0034149 3300044735 Bacteria 2121
110 Ga0466970_0017238 3300044765 Bacteria 3730
111 Ga0466957_0008334 3300044842 Bacteria 5893
112 Ga0466960_0001190 3300044901 Bacteria 9378
113 Ga0451576_0070307 3300045051 Bacteria 3643
114 Ga0466967_0205066 3300045976 Bacteria 1868
115 Ga0495638_0015402 3300046460 Bacteria 5136
116 Ga0495616_0047169 3300046513 Bacteria 2171
117 Ga0496106_0018964 3300048909 Bacteria 5097
118 Ga0496108_0000340 3300048911 Bacteria 39341
119 Ga0496108_0163761 3300048911 Bacteria 1923
120 Ga0496111_0166118 3300048914 Bacteria 1639
121 Ga0496112_0139597 3300048915 Bacteria 2393
122 Ga0496113_0004804 3300048916 Bacteria 8354
123 Ga0496123_0030473 3300048926 Bacteria 3947
124 Ga0501298_001902 3300049521 Bacteria 3110
125 Ga0501031_0004102 3300049568 Bacteria 9409
126 Ga0501031_0025267 3300049568 Bacteria 3875
127 Ga0501032_0014622 3300049569 Bacteria 5560
128 Ga0501033_0003559 3300049570 Bacteria 12737
129 Ga0501033_0147385 3300049570 Bacteria 1699
130 Ga0501034_0040449 3300049571 Bacteria 4719
131 Ga0501034_0072026 3300049571 Bacteria 3465
132 Ga0501036_0011690 3300049572 Bacteria 7275
133 Ga0501036_0045987 3300049572 Bacteria 3696
134 Ga0501037_0007602 3300049573 Bacteria 7935
135 Ga0501037_0007870 3300049573 Bacteria 7808
136 Ga0501038_0000606 3300049574 Bacteria 31851
137 Ga0501038_0021957 3300049574 Bacteria 5724
138 Ga0501039_0027488 3300049575 Bacteria 4375
139 Ga0501039_0034462 3300049575 Bacteria 3906
140 Ga0501040_0002728 3300049576 Bacteria 11377
141 Ga0501040_0081894 3300049576 Bacteria 2237
142 Ga0501041_0080467 3300049577 Bacteria 2006
143 Ga0501043_0043231 3300049579 Bacteria 3542
144 Ga0501046_0002372 3300049580 Bacteria 17708
145 Ga0501046_0033769 3300049580 Bacteria 4131
146 Ga0501046_0136776 3300049580 Bacteria 1855
147 Ga0501047_0007475 3300049581 Bacteria 10283
148 Ga0501047_0052311 3300049581 Bacteria 3947
149 Ga0501047_0142022 3300049581 Bacteria 2279
150 Ga0501048_0005994 3300049582 Bacteria 9258
151 Ga0501048_0010402 3300049582 Bacteria 6947
152 Ga0501069_0039832 3300049585 Bacteria 2596
153 Ga0501070_0011671 3300049586 Bacteria 7419
154 Ga0501070_0052557 3300049586 Bacteria 3382
155 Ga0501070_0076688 3300049586 Bacteria 2767
156 Ga0501072_0026526 3300049588 Bacteria 4517
157 Ga0501072_0052371 3300049588 Bacteria 3214
158 Ga0501072_0101966 3300049588 Bacteria 2281
159 Ga0501073_0042524 3300049589 Bacteria 3207
160 Ga0501073_0193152 3300049589 Bacteria 1409
161 Ga0501074_0030406 3300049590 Bacteria 3914
162 Ga0501075_0058680 3300049591 Bacteria 2898
163 Ga0501076_0006230 3300049592 Bacteria 8639
164 Ga0501076_0047405 3300049592 Bacteria 3397
165 Ga0501076_0102315 3300049592 Bacteria 2309
166 Ga0501079_0024467 3300049741 Bacteria 4634
167 Ga0501080_0030740 3300049742 Bacteria 5004
168 Ga0501080_0040870 3300049742 Bacteria 4324
169 Ga0501081_0005722 3300049743 Bacteria 8045
170 Ga0501035_0002875 3300049822 Bacteria 16606
171 Ga0501035_0038692 3300049822 Bacteria 4318
172 Ga0501035_0076907 3300049822 Bacteria 2950
173 Ga0501044_0022107 3300049823 Bacteria 6782
174 Ga0501045_0002683 3300049824 Bacteria 12142
175 nmdc:mga03n38_687_c1 3300050490 Bacteria 8824
176 nmdc:mga06z11_6361_c1 3300050494 Bacteria 4799
177 nmdc:mga04h51_1241_c1 3300050495 Bacteria 5901
178 nmdc:mga05p37_17549_c1 3300050507 Bacteria 8641
179 nmdc:mga05p37_253590_c1 3300050507 Bacteria 2109
180 nmdc:mga05p37_311506_c1 3300050507 Bacteria 1866
181 nmdc:mga05p37_47926_c1 3300050507 Bacteria 5255
182 nmdc:mga05p37_69653_c1 3300050507 Unclassified 4327
183 nmdc:mga05p37_90111_c1 3300050507 Bacteria 3780
184 nmdc:mga09592_173693_c1 3300050508 Bacteria 1864
185 nmdc:mga09592_250994_c1 3300050508 Bacteria 1534
186 nmdc:mga09592_47622_c1 3300050508 Bacteria 3613
187 nmdc:mga0qj67_169065_c1 3300050509 Bacteria 1775
188 nmdc:mga08y16_261743_c1 3300050511 Bacteria 1786
189 nmdc:mga0a205_5077_c1 3300050515 Bacteria 11835
190 Ga0500573_0003333 3300053140 Bacteria 8296
191 Ga0501084_0129368 3300054114 Bacteria 2125
192 Ga0501082_0015405 3300060353 Bacteria 6580
193 2559425570 2558860280 Bacteria 11429938
194 2644634163 2643221715 Bacteria 6671032
195 2689955891 2687453737 Bacteria 11203906
196 2784470988 2784132109 Bacteria 3141763
197 2856748669 2856741275 Bacteria 8096094
198 2873320380 2873314349 Bacteria 8512634
199 2891561557 2891554331 Bacteria 8812224
200 2891567725 2891562705 Bacteria 8039471
201 2902811309 2902810491 Bacteria 6794147
202 Ga0081539_10006187
203 SwRhRL2b_contig_3113853
204 JGI25406J46586_10002971
205 JGI25406J46586_10018989
206 Ga0065704_10002812
207 Ga0065707_10000715
208 Ga0065707_10084149
209 Ga0070689_100058443
210 Ga0070674_100032616
211 Ga0070708_100005852
212 Ga0070681_10116398
213 Ga0070707_100004651
214 Ga0070707_100059601
215 Ga0070707_100099244
216 Ga0070699_100008428
217 Ga0070699_100014827
218 Ga0070699_100127184
219 Ga0070697_100147786
220 Ga0070696_100010007
221 Ga0070704_100053177
222 Ga0068859_100130373
223 Ga0068862_100031944
224 Ga0081540_1007040
225 Ga0081539_10001241
226 Ga0081539_10001466
227 Ga0081539_10017161
228 Ga0081539_10030035
229 Ga0070717_10000009
230 Ga0070717_10010361
231 Ga0075365_10000417
232 Ga0075368_10000795
233 Ga0075363_100000220
234 Ga0075367_10005864
235 Ga0075428_100026088
236 Ga0075428_100032585
237 Ga0075430_100065763
238 Ga0075431_100019927
239 Ga0075431_100044888
240 Ga0075433_10006015
241 Ga0075434_100214197
242 Ga0075429_100007994
243 Ga0075429_100039303
244 Ga0075429_100254714
245 Ga0097620_100130374
246 Ga0111539_10214302
247 Ga0114129_10020283
248 Ga0114129_10027689
249 Ga0114129_10028474
250 Ga0114129_10119776
251 Ga0114129_10133547
252 Ga0114129_10190693
253 Ga0105243_10069748
254 Ga0105243_10120519
255 Ga0105246_10050129
256 Ga0157369_10009205
257 Ga0157372_10017120
258 Ga0157375_10046645
259 Ga0157375_10178758
260 Ga0206353_11626406
261 Ga0213875_10032842
262 Ga0207684_10208105
263 Ga0207646_10023560
264 Ga0207646_10117547
265 Ga0207646_10247830
266 Ga0207690_10122824
267 Ga0207709_10060097
268 Ga0207665_10068087
269 Ga0207708_10148672
270 Ga0207698_10205655
271 Ga0209813_10001348
272 Ga0265340_10028233
273 Ga0265340_10031497
274 Ga0265331_10040713
275 Ga0265316_10005374
276 Ga0265313_10005930
277 Ga0265313_10008452
278 Ga0265313_10011125
279 Ga0316575_10000489
280 Ga0265314_10120114
281 Ga0316576_10006130
282 Ga0316576_10014610
283 Ga0316576_10028397
284 Ga0316578_10001436
285 Ga0316578_10023227
286 Ga0307516_10076064
287 Ga0307413_10109547
288 Ga0307412_10046961
289 Ga0307416_100265642
290 Ga0373942_0001203
291 Ga0316574_0000528
292 Ga0316574_0009085
293 Ga0316574_0009641
294 Ga0316574_0022196
295 Ga0316582_0006170
296 Ga0316584_0003257
297 Ga0316584_0010303
298 Ga0395900_0136506
299 Ga0395900_0208161
300 Ga0395905_0124966
301 Ga0436363_1711700
302 Ga0451853_2885194
303 Ga0439442_011003
304 Ga0466972_0007483
305 Ga0466972_0076147
306 Ga0466977_0001549
307 Ga0453683_0047329
308 Ga0466965_0002364
309 Ga0466963_0072770
310 Ga0466968_0034149
311 Ga0466970_0017238
312 Ga0466957_0008334
313 Ga0466960_0001190
314 Ga0451576_0070307
315 Ga0466967_0205066
316 Ga0495638_0015402
317 Ga0495616_0047169
318 Ga0496106_0018964
319 Ga0496108_0000340
320 Ga0496108_0163761
321 Ga0496111_0166118
322 Ga0496112_0139597
323 Ga0496113_0004804
324 Ga0496123_0030473
325 Ga0501298_001902
326 Ga0501031_0004102
327 Ga0501031_0025267
328 Ga0501032_0014622
329 Ga0501033_0003559
330 Ga0501033_0147385
331 Ga0501034_0040449
332 Ga0501034_0072026
333 Ga0501036_0011690
334 Ga0501036_0045987
335 Ga0501037_0007602
336 Ga0501037_0007870
337 Ga0501038_0000606
338 Ga0501038_0021957
339 Ga0501039_0027488
340 Ga0501039_0034462
341 Ga0501040_0002728
342 Ga0501040_0081894
343 Ga0501041_0080467
344 Ga0501043_0043231
345 Ga0501046_0002372
346 Ga0501046_0033769
347 Ga0501046_0136776
348 Ga0501047_0007475
349 Ga0501047_0052311
350 Ga0501047_0142022
351 Ga0501048_0005994
352 Ga0501048_0010402
353 Ga0501069_0039832
354 Ga0501070_0011671
355 Ga0501070_0052557
356 Ga0501070_0076688
357 Ga0501072_0026526
358 Ga0501072_0052371
359 Ga0501072_0101966
360 Ga0501073_0042524
361 Ga0501073_0193152
362 Ga0501074_0030406
363 Ga0501075_0058680
364 Ga0501076_0006230
365 Ga0501076_0047405
366 Ga0501076_0102315
367 Ga0501079_0024467
368 Ga0501080_0030740
369 Ga0501080_0040870
370 Ga0501081_0005722
371 Ga0501035_0002875
372 Ga0501035_0038692
373 Ga0501035_0076907
374 Ga0501044_0022107
375 Ga0501045_0002683
376 nmdc:mga03n38_687_c1
377 nmdc:mga06z11_6361_c1
378 nmdc:mga04h51_1241_c1
379 nmdc:mga05p37_17549_c1
380 nmdc:mga05p37_253590_c1
381 nmdc:mga05p37_311506_c1
382 nmdc:mga05p37_47926_c1
383 nmdc:mga05p37_69653_c1
384 nmdc:mga05p37_90111_c1
385 nmdc:mga09592_173693_c1
386 nmdc:mga09592_250994_c1
387 nmdc:mga09592_47622_c1
388 nmdc:mga0qj67_169065_c1
389 nmdc:mga08y16_261743_c1
390 nmdc:mga0a205_5077_c1
391 Ga0500573_0003333
392 Ga0501084_0129368
393 Ga0501082_0015405
394 2559425570
395 2644634163
396 2689955891
397 2784470988
398 2856748669
399 2873320380
400 2891561557
401 2891567725
402 2902811309

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

36

493

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qf6-assembly1.cif.gz_C structure of aldehyde dehydrogenase from bacillus cereus, e194s mutant 0.9778 1 478
5gtk-assembly1.cif.gz_A nad+ complex structure of aldehyde dehydrogenase from bacillus cereus 0.9774 1 478
4qet-assembly1.cif.gz_C structure of aldehyde dehydrogenase from bacillus cereus, g224d mutant 0.9768 1 478
4o6r-assembly1.cif.gz_D crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia 0.9753 3 478
4go4-assembly4.cif.gz_G crystal structure of pnpe in complex with nicotinamide adenine dinucleotide 0.9751 1 478
ID Description Score Start End Superfamily
af_P40047_292_478_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.987 254 442 3.40.309.10
3iwkA02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9867 253 443 3.40.309.10
af_Q2FWD6_250_434_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9835 255 437 3.40.309.10
af_A0A0R0K6H9_274_501_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9823 255 475 3.40.309.10
af_P40047_292_478_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9818 254 442 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A7J9FZ24-F1-model_v4 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) 0.9898 294 427 GO:0019145
GO:0110095
AF-A0A7X4LP17-F1-model_v4 Aldehyde dehydrogenase family protein 0.9853 1 479 GO:0016620
AF-A0A560RUU8-F1-model_v4 Phenylacetaldehyde dehydrogenase 0.985 136 475 GO:0016620
AF-A0A024GZ07-F1-model_v4 Aldehyde dehydrogenase family protein 0.9837 4 478 GO:0016620
AF-A0A5K1HJQ9-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9833 142 256 GO:0016491

Map