F309086
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 201 | 136 | 194 | 452 |
Family's Representative Sequence
| Representative Sequence | 3300049824|Ga0501045_0028797|Ga0501045_0028797_2372_3919 |
| Length | 515 |
| Sequence | MTRNSVLVVDDDPDLLKLLALRLGAAGYTVQSAESGEKALAALAVSRPDVVVTDLKMGGMDGLALFEAIQKTAPTLPVIILTAHGTIPDAVDATRRGVFGFLPKPFEGRELLAQVEQALKLSSPAVARGEDEDWRAELVTASPQMESLLAQAKLVAQSDASVLIHGASGTGKELVARAIHRASRRRSAPFVAVNCAAIPEALLESELFGHRKGAFTGATYDHKGLFQAADGGTVFLDEIGDMPAPLQAKLLRALQEREVRPVGAAQSVPVDVRIISATHRNLEERVAAGEFREDLYYRLNVVSLTIPPLSQRPEDIVPLAKHFLAATARRYAKDVRAFAPEALEMLLGAPWPGNVRQLANVVEQTVALATSPVVPAALVATALKSEPSGLTPLDEAKRTFERDYLIRILRITSGNVTQAARLAQRNRTEFYKLLDRHQLRHRCSRGRRPSAALRADEDAVRRRAAGIRCSVAGGRQPCEAHDACHRRTPYAAHPSNDSLTLCRHPARFQCDSPSS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2765235838 | Herbaspirillum robiniae AA6 | Isolate | Unclassified |
| 2 | 2808606386 | Herbaspirillum sp. SJZ099 | Isolate | Rhizosphere |
| 3 | 2808606415 | Herbaspirillum sp. SJZ130 | Isolate | Rhizosphere |
| 4 | 2808606419 | Herbaspirillum sp. SJZ106 | Isolate | Rhizosphere |
| 5 | 2839094727 | Herbaspirillum robiniae HZ10 | Isolate | Nodule |
| 6 | 2852618963 | Herbaspirillum sp. SJZ102 | Isolate | Rhizosphere |
| 7 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 8 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 9 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 10 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 12 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 25 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 26 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 30 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 31 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 33 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 34 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 35 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 36 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 37 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 38 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 39 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 40 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 41 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 42 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 44 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 45 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 46 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 47 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 63 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 89 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 92 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 93 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 94 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 95 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 96 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 97 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 98 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 99 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 100 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 101 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 102 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 103 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 104 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 105 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 106 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 107 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 108 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 109 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 110 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 111 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 112 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 113 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 114 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 118 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 119 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 130 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 134 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 136 | 639633007 | Azoarcus olearius BH72 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.02 |
| Metatranscriptomes | 1.49 |
| Isolates | 3.48 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.47 |
| Nodule | 0.5 |
| Rhizoplane | 0.5 |
| Rhizosphere | 81.09 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.44 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055538_1000049 | 3300003751 | Bacteria | 131357 |
| 2 | Ga0055540_1003336 | 3300003792 | Bacteria | 7810 |
| 3 | Ga0055531_10002040 | 3300003794 | Bacteria | 13949 |
| 4 | Ga0070690_100001529 | 3300005330 | Bacteria | 12123 |
| 5 | Ga0068869_100007630 | 3300005334 | Bacteria | 6926 |
| 6 | Ga0068869_100034864 | 3300005334 | Bacteria | 3563 |
| 7 | Ga0068869_100149837 | 3300005334 | Bacteria | 1808 |
| 8 | Ga0070689_100005814 | 3300005340 | Bacteria | 8465 |
| 9 | Ga0070691_10021938 | 3300005341 | Bacteria | 2959 |
| 10 | Ga0070687_100017705 | 3300005343 | Bacteria | 3283 |
| 11 | Ga0070692_10005806 | 3300005345 | Bacteria | 5306 |
| 12 | Ga0070674_100012666 | 3300005356 | Bacteria | 5185 |
| 13 | Ga0070701_10053208 | 3300005438 | Bacteria | 2106 |
| 14 | Ga0070700_100004169 | 3300005441 | Bacteria | 7536 |
| 15 | Ga0070694_100037364 | 3300005444 | Bacteria | 3221 |
| 16 | Ga0070678_100035717 | 3300005456 | Bacteria | 3473 |
| 17 | Ga0070678_100092263 | 3300005456 | Bacteria | 2326 |
| 18 | Ga0070681_10129243 | 3300005458 | Bacteria | 2458 |
| 19 | Ga0068867_100006638 | 3300005459 | Bacteria | 8181 |
| 20 | Ga0070698_100025218 | 3300005471 | Bacteria | 6194 |
| 21 | Ga0068853_100006756 | 3300005539 | Bacteria | 9140 |
| 22 | Ga0070686_100009485 | 3300005544 | Bacteria | 5472 |
| 23 | Ga0070686_100069522 | 3300005544 | Bacteria | 2300 |
| 24 | Ga0070695_100081682 | 3300005545 | Bacteria | 2139 |
| 25 | Ga0070665_100030557 | 3300005548 | Bacteria | 5419 |
| 26 | Ga0070704_100019149 | 3300005549 | Bacteria | 4394 |
| 27 | Ga0070704_100025156 | 3300005549 | Bacteria | 3916 |
| 28 | Ga0068855_100115090 | 3300005563 | Bacteria | 3083 |
| 29 | Ga0068857_100074163 | 3300005577 | Bacteria | 3032 |
| 30 | Ga0068857_100111761 | 3300005577 | Bacteria | 2456 |
| 31 | Ga0070702_100006975 | 3300005615 | Bacteria | 5382 |
| 32 | Ga0068859_100014664 | 3300005617 | Bacteria | 7876 |
| 33 | Ga0068859_100138170 | 3300005617 | Bacteria | 2510 |
| 34 | Ga0068866_10002287 | 3300005718 | Bacteria | 7931 |
| 35 | Ga0068866_10067743 | 3300005718 | Bacteria | 1875 |
| 36 | Ga0068861_100007736 | 3300005719 | Bacteria | 7382 |
| 37 | Ga0068863_100052008 | 3300005841 | Bacteria | 3882 |
| 38 | Ga0068858_100001522 | 3300005842 | Bacteria | 23817 |
| 39 | Ga0068858_100011647 | 3300005842 | Bacteria | 8295 |
| 40 | Ga0068858_100022117 | 3300005842 | Bacteria | 5938 |
| 41 | Ga0068860_100093135 | 3300005843 | Bacteria | 2871 |
| 42 | Ga0068862_100009805 | 3300005844 | Bacteria | 7915 |
| 43 | Ga0075363_100089613 | 3300006048 | Bacteria | 1691 |
| 44 | Ga0075367_10006046 | 3300006178 | Bacteria | 6080 |
| 45 | Ga0075366_10003057 | 3300006195 | Bacteria | 8735 |
| 46 | Ga0097621_100002530 | 3300006237 | Bacteria | 12525 |
| 47 | Ga0068871_100016625 | 3300006358 | Bacteria | 5549 |
| 48 | Ga0075428_100207399 | 3300006844 | Bacteria | 2118 |
| 49 | Ga0075433_10052118 | 3300006852 | Bacteria | 3565 |
| 50 | Ga0068865_100005871 | 3300006881 | Bacteria | 7469 |
| 51 | Ga0097620_100014664 | 3300006931 | Bacteria | 7876 |
| 52 | Ga0097620_100138172 | 3300006931 | Bacteria | 2510 |
| 53 | Ga0105240_10125629 | 3300009093 | Bacteria | 3083 |
| 54 | Ga0105245_10015310 | 3300009098 | Bacteria | 6684 |
| 55 | Ga0105245_10016102 | 3300009098 | Bacteria | 6515 |
| 56 | Ga0105245_10034882 | 3300009098 | Bacteria | 4463 |
| 57 | Ga0105245_10076196 | 3300009098 | Bacteria | 3055 |
| 58 | Ga0105245_10147061 | 3300009098 | Bacteria | 2224 |
| 59 | Ga0105243_10009800 | 3300009148 | Bacteria | 7292 |
| 60 | Ga0105242_10003852 | 3300009176 | Bacteria | 11668 |
| 61 | Ga0105242_10007510 | 3300009176 | Bacteria | 8387 |
| 62 | Ga0105242_10008690 | 3300009176 | Bacteria | 7794 |
| 63 | Ga0105248_10001255 | 3300009177 | Bacteria | 28351 |
| 64 | Ga0105248_10048375 | 3300009177 | Bacteria | 4770 |
| 65 | Ga0105237_10023136 | 3300009545 | Bacteria | 6371 |
| 66 | Ga0105237_10036159 | 3300009545 | Bacteria | 4996 |
| 67 | Ga0105237_10308191 | 3300009545 | Bacteria | 1586 |
| 68 | Ga0105238_10087913 | 3300009551 | Bacteria | 3094 |
| 69 | Ga0105249_10022011 | 3300009553 | Bacteria | 5708 |
| 70 | Ga0105239_10032553 | 3300010375 | Bacteria | 5729 |
| 71 | Ga0157378_10003568 | 3300013297 | Bacteria | 13775 |
| 72 | Ga0157378_10016112 | 3300013297 | Bacteria | 6545 |
| 73 | Ga0163162_10035927 | 3300013306 | Bacteria | 4937 |
| 74 | Ga0163162_10088156 | 3300013306 | Bacteria | 3183 |
| 75 | Ga0157375_10037573 | 3300013308 | Bacteria | 4641 |
| 76 | Ga0157379_10013430 | 3300014968 | Bacteria | 7173 |
| 77 | Ga0157376_10007458 | 3300014969 | Bacteria | 7810 |
| 78 | Ga0209673_1019790 | 3300025273 | Bacteria | 2405 |
| 79 | Ga0209051_1000114 | 3300025303 | Bacteria | 152303 |
| 80 | Ga0209257_1000015 | 3300025304 | Bacteria | 908141 |
| 81 | Ga0207642_10009628 | 3300025899 | Bacteria | 3370 |
| 82 | Ga0207642_10012211 | 3300025899 | Bacteria | 3094 |
| 83 | Ga0207662_10027288 | 3300025918 | Bacteria | 3295 |
| 84 | Ga0207694_10023555 | 3300025924 | Bacteria | 4674 |
| 85 | Ga0207650_10056404 | 3300025925 | Bacteria | 2919 |
| 86 | Ga0207659_10030078 | 3300025926 | Bacteria | 3707 |
| 87 | Ga0207687_10008031 | 3300025927 | Bacteria | 6907 |
| 88 | Ga0207687_10033969 | 3300025927 | Bacteria | 3462 |
| 89 | Ga0207687_10049454 | 3300025927 | Bacteria | 2923 |
| 90 | Ga0207686_10004322 | 3300025934 | Bacteria | 7614 |
| 91 | Ga0207686_10024895 | 3300025934 | Bacteria | 3474 |
| 92 | Ga0207709_10015675 | 3300025935 | Bacteria | 4205 |
| 93 | Ga0207709_10072957 | 3300025935 | Bacteria | 2185 |
| 94 | Ga0207670_10059073 | 3300025936 | Bacteria | 2607 |
| 95 | Ga0207669_10011062 | 3300025937 | Bacteria | 4375 |
| 96 | Ga0207669_10089330 | 3300025937 | Bacteria | 2001 |
| 97 | Ga0207704_10003314 | 3300025938 | Bacteria | 7311 |
| 98 | Ga0207711_10024009 | 3300025941 | Bacteria | 5103 |
| 99 | Ga0207689_10002776 | 3300025942 | Bacteria | 16192 |
| 100 | Ga0207689_10022252 | 3300025942 | Bacteria | 5329 |
| 101 | Ga0207689_10171959 | 3300025942 | Bacteria | 1786 |
| 102 | Ga0207667_10060304 | 3300025949 | Bacteria | 3971 |
| 103 | Ga0207677_10068068 | 3300026023 | Bacteria | 2497 |
| 104 | Ga0207703_10048919 | 3300026035 | Bacteria | 3416 |
| 105 | Ga0207703_10111087 | 3300026035 | Bacteria | 2339 |
| 106 | Ga0207639_10066311 | 3300026041 | Bacteria | 2805 |
| 107 | Ga0207708_10003392 | 3300026075 | Bacteria | 11737 |
| 108 | Ga0207702_10044392 | 3300026078 | Bacteria | 3736 |
| 109 | Ga0207648_10006279 | 3300026089 | Bacteria | 11825 |
| 110 | Ga0207648_10085807 | 3300026089 | Bacteria | 2746 |
| 111 | Ga0207648_10191277 | 3300026089 | Bacteria | 1814 |
| 112 | Ga0207674_10012548 | 3300026116 | Bacteria | 9466 |
| 113 | Ga0207674_10016266 | 3300026116 | Bacteria | 8148 |
| 114 | Ga0207675_100008406 | 3300026118 | Bacteria | 9728 |
| 115 | Ga0207675_100060989 | 3300026118 | Bacteria | 3521 |
| 116 | Ga0207683_10126599 | 3300026121 | Bacteria | 2296 |
| 117 | Ga0207428_10013645 | 3300027907 | Bacteria | 7087 |
| 118 | Ga0268266_10032457 | 3300028379 | Bacteria | 4436 |
| 119 | Ga0268265_10018772 | 3300028380 | Bacteria | 4797 |
| 120 | Ga0316575_10001539 | 3300031665 | Bacteria | 7466 |
| 121 | Ga0316576_10034947 | 3300031727 | Bacteria | 3585 |
| 122 | Ga0316576_10101751 | 3300031727 | Bacteria | 2148 |
| 123 | Ga0316576_10126074 | 3300031727 | Bacteria | 1924 |
| 124 | Ga0316577_10050120 | 3300031733 | Bacteria | 2330 |
| 125 | Ga0307416_100098958 | 3300032002 | Bacteria | 2531 |
| 126 | Ga0316585_10001149 | 3300032137 | Bacteria | 6893 |
| 127 | Ga0316593_10000514 | 3300032168 | Bacteria | 7160 |
| 128 | Ga0316593_10019325 | 3300032168 | Bacteria | 2104 |
| 129 | Ga0316593_10031904 | 3300032168 | Bacteria | 1718 |
| 130 | Ga0316574_0001547 | 3300035398 | Bacteria | 10978 |
| 131 | Ga0316574_0002809 | 3300035398 | Bacteria | 8832 |
| 132 | Ga0316574_0004216 | 3300035398 | Bacteria | 7499 |
| 133 | Ga0316574_0018252 | 3300035398 | Bacteria | 4120 |
| 134 | Ga0316574_0237037 | 3300035398 | Bacteria | 1167 |
| 135 | Ga0373935_0042239 | 3300035692 | Bacteria | 2866 |
| 136 | Ga0373937_0033522 | 3300036401 | Bacteria | 4665 |
| 137 | Ga0316582_0003682 | 3300036647 | Bacteria | 7575 |
| 138 | Ga0316582_0005763 | 3300036647 | Bacteria | 6425 |
| 139 | Ga0316582_0139449 | 3300036647 | Bacteria | 1634 |
| 140 | Ga0316582_0142767 | 3300036647 | Bacteria | 1615 |
| 141 | Ga0316584_0000470 | 3300036712 | Bacteria | 21100 |
| 142 | Ga0316584_0025231 | 3300036712 | Bacteria | 4358 |
| 143 | Ga0395905_0041504 | 3300037471 | Bacteria | 4317 |
| 144 | Ga0395905_0062920 | 3300037471 | Bacteria | 3471 |
| 145 | Ga0400484_06734 | 3300038725 | Bacteria | 3799 |
| 146 | Ga0400484_07887 | 3300038725 | Bacteria | 19209 |
| 147 | Ga0400484_23896 | 3300038725 | Bacteria | 1224 |
| 148 | Ga0400484_35294 | 3300038725 | Bacteria | 6132 |
| 149 | Ga0400490_12391 | 3300038726 | Bacteria | 12576 |
| 150 | Ga0400490_16789 | 3300038726 | Bacteria | 9654 |
| 151 | Ga0400490_35055 | 3300038726 | Bacteria | 6587 |
| 152 | Ga0400491_22562 | 3300038727 | Bacteria | 7539 |
| 153 | Ga0400491_24764 | 3300038727 | Bacteria | 4078 |
| 154 | Ga0400485_19059 | 3300038735 | Bacteria | 16507 |
| 155 | Ga0400488_00024 | 3300038741 | Bacteria | 4094 |
| 156 | Ga0400488_30478 | 3300038741 | Bacteria | 4636 |
| 157 | Ga0400488_34208 | 3300038741 | Bacteria | 12154 |
| 158 | Ga0400488_50369 | 3300038741 | Bacteria | 9111 |
| 159 | Ga0400486_12410 | 3300038742 | Bacteria | 19729 |
| 160 | Ga0400483_123728 | 3300039062 | Bacteria | 11220 |
| 161 | Ga0400483_151080 | 3300039062 | Bacteria | 14062 |
| 162 | Ga0400487_01118 | 3300039110 | Bacteria | 27006 |
| 163 | Ga0400487_13806 | 3300039110 | Bacteria | 11628 |
| 164 | Ga0400487_34028 | 3300039110 | Bacteria | 26819 |
| 165 | Ga0400487_47709 | 3300039110 | Bacteria | 29468 |
| 166 | Ga0400487_54159 | 3300039110 | Bacteria | 19664 |
| 167 | Ga0451577_0121406 | 3300042876 | Bacteria | 2341 |
| 168 | Ga0453684_0016029 | 3300044712 | Bacteria | 11766 |
| 169 | Ga0451576_0011894 | 3300045051 | Bacteria | 9842 |
| 170 | Ga0495582_0101423 | 3300046473 | Bacteria | 1612 |
| 171 | Ga0495621_0016412 | 3300046539 | Bacteria | 2377 |
| 172 | Ga0495656_0072596 | 3300046615 | Bacteria | 1532 |
| 173 | Ga0496102_0190256 | 3300048905 | Bacteria | 1934 |
| 174 | Ga0496116_0066253 | 3300048919 | Bacteria | 2312 |
| 175 | Ga0501033_0038555 | 3300049570 | Bacteria | 3572 |
| 176 | Ga0501039_0008666 | 3300049575 | Bacteria | 7748 |
| 177 | Ga0501041_0002567 | 3300049577 | Bacteria | 10350 |
| 178 | Ga0501048_0008525 | 3300049582 | Bacteria | 7750 |
| 179 | Ga0501075_0001026 | 3300049591 | Bacteria | 17906 |
| 180 | Ga0501075_0028934 | 3300049591 | Bacteria | 4094 |
| 181 | Ga0501076_0000098 | 3300049592 | Bacteria | 47158 |
| 182 | Ga0501076_0058572 | 3300049592 | Bacteria | 3062 |
| 183 | Ga0501079_0010818 | 3300049741 | Bacteria | 6949 |
| 184 | Ga0501080_0001504 | 3300049742 | Bacteria | 19672 |
| 185 | Ga0501081_0007806 | 3300049743 | Bacteria | 6936 |
| 186 | Ga0501045_0003259 | 3300049824 | Bacteria | 11087 |
| 187 | Ga0501045_0028797 | 3300049824 | Bacteria | 4009 |
| 188 | nmdc:mga0k408_101684_c1 | 3300050493 | Bacteria | 1695 |
| 189 | nmdc:mga06r32_10930_c1 | 3300050510 | Bacteria | 8174 |
| 190 | nmdc:mga08y16_1101_c1 | 3300050511 | Bacteria | 26621 |
| 191 | nmdc:mga0a205_18225_c2 | 3300050515 | Bacteria | 3569 |
| 192 | Ga0500618_003836 | 3300053125 | Bacteria | 5013 |
| 193 | Ga0501082_0021308 | 3300060353 | Bacteria | 5591 |
| 194 | Ga0530510_0001520 | 3300061734 | Bacteria | 15616 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300035398 | Ga0316574_0237037 | Ga0316574_0237037_19_1152 | 372 |
| 2 | 3300038725 | Ga0400484_23896 | Ga0400484_23896_31_1206 | 386 |
| 3 | 3300036647 | Ga0316582_0142767 | Ga0316582_0142767_139_1500 | 419 |
| 4 | 3300025925 | Ga0207650_10056404 | Ga0207650_100564042 | 421 |
| 5 | 3300005577 | Ga0068857_100074163 | Ga0068857_1000741631 | 425 |
| 6 | 3300025926 | Ga0207659_10030078 | Ga0207659_100300783 | 425 |
| 7 | 3300025937 | Ga0207669_10089330 | Ga0207669_100893301 | 425 |
| 8 | 3300026116 | Ga0207674_10012548 | Ga0207674_100125486 | 425 |
| 9 | 3300032002 | Ga0307416_100098958 | Ga0307416_1000989582 | 428 |
| 10 | 3300025899 | Ga0207642_10012211 | Ga0207642_100122112 | 430 |
| 11 | 3300039110 | Ga0400487_34028 | Ga0400487_34028_24493_25854 | 433 |
| 12 | 3300009098 | Ga0105245_10034882 | Ga0105245_100348822 | 437 |
| 13 | 3300009545 | Ga0105237_10308191 | Ga0105237_103081911 | 437 |
| 14 | 3300025942 | Ga0207689_10171959 | Ga0207689_101719591 | 437 |
| 15 | 3300026118 | Ga0207675_100060989 | Ga0207675_1000609892 | 437 |
| 16 | 3300005842 | Ga0068858_100001522 | Ga0068858_10000152215 | 438 |
| 17 | 3300009098 | Ga0105245_10147061 | Ga0105245_101470612 | 438 |
| 18 | 3300009176 | Ga0105242_10003852 | Ga0105242_100038528 | 438 |
| 19 | 3300009177 | Ga0105248_10048375 | Ga0105248_100483754 | 438 |
| 20 | 3300009551 | Ga0105238_10087913 | Ga0105238_100879132 | 438 |
| 21 | 3300013306 | Ga0163162_10035927 | Ga0163162_100359272 | 438 |
| 22 | 3300014968 | Ga0157379_10013430 | Ga0157379_100134302 | 438 |
| 23 | 3300025924 | Ga0207694_10023555 | Ga0207694_100235555 | 438 |
| 24 | 3300025934 | Ga0207686_10024895 | Ga0207686_100248952 | 438 |
| 25 | 3300025935 | Ga0207709_10072957 | Ga0207709_100729572 | 438 |
| 26 | 3300026035 | Ga0207703_10111087 | Ga0207703_101110871 | 438 |
| 27 | 3300038726 | Ga0400490_16789 | Ga0400490_16789_4508_5839 | 438 |
| 28 | 3300038741 | Ga0400488_00024 | Ga0400488_00024_326_1657 | 438 |
| 29 | 3300005334 | Ga0068869_100149837 | Ga0068869_1001498372 | 439 |
| 30 | 3300025942 | Ga0207689_10022252 | Ga0207689_100222522 | 439 |
| 31 | 3300042876 | Ga0451577_0121406 | Ga0451577_0121406_245_1582 | 439 |
| 32 | 3300005563 | Ga0068855_100115090 | Ga0068855_1001150902 | 440 |
| 33 | 3300025949 | Ga0207667_10060304 | Ga0207667_100603043 | 440 |
| 34 | 3300027907 | Ga0207428_10013645 | Ga0207428_100136453 | 441 |
| 35 | 3300038726 | Ga0400490_12391 | Ga0400490_12391_11056_12408 | 441 |
| 36 | 3300038735 | Ga0400485_19059 | Ga0400485_19059_5348_6700 | 441 |
| 37 | 3300038741 | Ga0400488_30478 | Ga0400488_30478_1131_2483 | 441 |
| 38 | 3300038741 | Ga0400488_50369 | Ga0400488_50369_1805_3157 | 441 |
| 39 | 3300038742 | Ga0400486_12410 | Ga0400486_12410_8551_9903 | 441 |
| 40 | 3300039062 | Ga0400483_123728 | Ga0400483_123728_6950_8302 | 441 |
| 41 | 3300039062 | Ga0400483_151080 | Ga0400483_151080_5956_7308 | 441 |
| 42 | 3300039110 | Ga0400487_01118 | Ga0400487_01118_5276_6628 | 441 |
| 43 | 3300039110 | Ga0400487_47709 | Ga0400487_47709_1243_2595 | 441 |
| 44 | 3300039110 | Ga0400487_54159 | Ga0400487_54159_9797_11149 | 441 |
| 45 | 3300050511 | nmdc:mga08y16_1101_c1 | nmdc:mga08y16_1101_c1_8573_9916 | 441 |
| 46 | 3300005330 | Ga0070690_100001529 | Ga0070690_1000015295 | 442 |
| 47 | 3300005334 | Ga0068869_100007630 | Ga0068869_1000076305 | 442 |
| 48 | 3300005340 | Ga0070689_100005814 | Ga0070689_1000058145 | 442 |
| 49 | 3300005341 | Ga0070691_10021938 | Ga0070691_100219381 | 442 |
| 50 | 3300005343 | Ga0070687_100017705 | Ga0070687_1000177052 | 442 |
| 51 | 3300005345 | Ga0070692_10005806 | Ga0070692_100058062 | 442 |
| 52 | 3300005438 | Ga0070701_10053208 | Ga0070701_100532081 | 442 |
| 53 | 3300005441 | Ga0070700_100004169 | Ga0070700_1000041695 | 442 |
| 54 | 3300005456 | Ga0070678_100035717 | Ga0070678_1000357174 | 442 |
| 55 | 3300005459 | Ga0068867_100006638 | Ga0068867_1000066383 | 442 |
| 56 | 3300005544 | Ga0070686_100009485 | Ga0070686_1000094855 | 442 |
| 57 | 3300005544 | Ga0070686_100069522 | Ga0070686_1000695222 | 442 |
| 58 | 3300005549 | Ga0070704_100019149 | Ga0070704_1000191493 | 442 |
| 59 | 3300005615 | Ga0070702_100006975 | Ga0070702_1000069753 | 442 |
| 60 | 3300005617 | Ga0068859_100014664 | Ga0068859_1000146645 | 442 |
| 61 | 3300005718 | Ga0068866_10002287 | Ga0068866_100022877 | 442 |
| 62 | 3300005719 | Ga0068861_100007736 | Ga0068861_1000077361 | 442 |
| 63 | 3300005842 | Ga0068858_100011647 | Ga0068858_1000116475 | 442 |
| 64 | 3300005844 | Ga0068862_100009805 | Ga0068862_1000098055 | 442 |
| 65 | 3300006237 | Ga0097621_100002530 | Ga0097621_1000025305 | 442 |
| 66 | 3300006358 | Ga0068871_100016625 | Ga0068871_1000166255 | 442 |
| 67 | 3300006881 | Ga0068865_100005871 | Ga0068865_1000058712 | 442 |
| 68 | 3300006931 | Ga0097620_100014664 | Ga0097620_1000146645 | 442 |
| 69 | 3300009148 | Ga0105243_10009800 | Ga0105243_100098005 | 442 |
| 70 | 3300009176 | Ga0105242_10008690 | Ga0105242_100086906 | 442 |
| 71 | 3300009553 | Ga0105249_10022011 | Ga0105249_100220115 | 442 |
| 72 | 3300013297 | Ga0157378_10003568 | Ga0157378_100035687 | 442 |
| 73 | 3300025899 | Ga0207642_10009628 | Ga0207642_100096282 | 442 |
| 74 | 3300025918 | Ga0207662_10027288 | Ga0207662_100272884 | 442 |
| 75 | 3300025927 | Ga0207687_10008031 | Ga0207687_100080317 | 442 |
| 76 | 3300025934 | Ga0207686_10004322 | Ga0207686_100043225 | 442 |
| 77 | 3300025935 | Ga0207709_10015675 | Ga0207709_100156755 | 442 |
| 78 | 3300025936 | Ga0207670_10059073 | Ga0207670_100590733 | 442 |
| 79 | 3300025942 | Ga0207689_10002776 | Ga0207689_100027769 | 442 |
| 80 | 3300026023 | Ga0207677_10068068 | Ga0207677_100680682 | 442 |
| 81 | 3300026075 | Ga0207708_10003392 | Ga0207708_1000339210 | 442 |
| 82 | 3300026089 | Ga0207648_10006279 | Ga0207648_100062795 | 442 |
| 83 | 3300026118 | Ga0207675_100008406 | Ga0207675_1000084067 | 442 |
| 84 | 3300028380 | Ga0268265_10018772 | Ga0268265_100187724 | 442 |
| 85 | 3300038727 | Ga0400491_24764 | Ga0400491_24764_275_1630 | 442 |
| 86 | 3300035398 | Ga0316574_0001547 | Ga0316574_0001547_4441_5790 | 443 |
| 87 | 3300035398 | Ga0316574_0018252 | Ga0316574_0018252_2213_3559 | 443 |
| 88 | 3300036647 | Ga0316582_0003682 | Ga0316582_0003682_2257_3603 | 443 |
| 89 | 3300036712 | Ga0316584_0025231 | Ga0316584_0025231_2122_3468 | 443 |
| 90 | 3300038725 | Ga0400484_06734 | Ga0400484_06734_2365_3723 | 443 |
| 91 | 3300048905 | Ga0496102_0190256 | Ga0496102_0190256_344_1693 | 443 |
| 92 | 3300009098 | Ga0105245_10015310 | Ga0105245_100153105 | 444 |
| 93 | 3300009177 | Ga0105248_10001255 | Ga0105248_1000125520 | 444 |
| 94 | 3300013306 | Ga0163162_10088156 | Ga0163162_100881563 | 444 |
| 95 | 3300014969 | Ga0157376_10007458 | Ga0157376_100074583 | 444 |
| 96 | 3300037471 | Ga0395905_0062920 | Ga0395905_0062920_1736_3094 | 444 |
| 97 | 3300038725 | Ga0400484_07887 | Ga0400484_07887_11887_13248 | 444 |
| 98 | 3300038725 | Ga0400484_35294 | Ga0400484_35294_1360_2721 | 444 |
| 99 | 3300038726 | Ga0400490_35055 | Ga0400490_35055_4205_5566 | 444 |
| 100 | 3300038727 | Ga0400491_22562 | Ga0400491_22562_2906_4267 | 444 |
| 101 | 3300038741 | Ga0400488_34208 | Ga0400488_34208_10610_11971 | 444 |
| 102 | 3300046473 | Ga0495582_0101423 | Ga0495582_0101423_131_1492 | 444 |
| 103 | 3300037471 | Ga0395905_0041504 | Ga0395905_0041504_456_1817 | 445 |
| 104 | 3300046539 | Ga0495621_0016412 | Ga0495621_0016412_507_1871 | 445 |
| 105 | 3300009093 | Ga0105240_10125629 | Ga0105240_101256292 | 446 |
| 106 | 3300009545 | Ga0105237_10023136 | Ga0105237_100231364 | 446 |
| 107 | 3300039110 | Ga0400487_13806 | Ga0400487_13806_3231_4601 | 446 |
| 108 | 3300006195 | Ga0075366_10003057 | Ga0075366_100030574 | 447 |
| 109 | 3300031727 | Ga0316576_10101751 | Ga0316576_101017512 | 447 |
| 110 | 3300031727 | Ga0316576_10126074 | Ga0316576_101260742 | 447 |
| 111 | 3300032137 | Ga0316585_10001149 | Ga0316585_100011496 | 447 |
| 112 | 3300032168 | Ga0316593_10000514 | Ga0316593_100005144 | 447 |
| 113 | 3300035398 | Ga0316574_0004216 | Ga0316574_0004216_5275_6645 | 447 |
| 114 | 3300036647 | Ga0316582_0005763 | Ga0316582_0005763_2787_4157 | 447 |
| 115 | 3300036647 | Ga0316582_0139449 | Ga0316582_0139449_208_1578 | 447 |
| 116 | 3300005334 | Ga0068869_100034864 | Ga0068869_1000348643 | 448 |
| 117 | 3300005444 | Ga0070694_100037364 | Ga0070694_1000373642 | 448 |
| 118 | 3300005456 | Ga0070678_100092263 | Ga0070678_1000922632 | 448 |
| 119 | 3300005548 | Ga0070665_100030557 | Ga0070665_1000305574 | 448 |
| 120 | 3300005617 | Ga0068859_100138170 | Ga0068859_1001381702 | 448 |
| 121 | 3300005718 | Ga0068866_10067743 | Ga0068866_100677431 | 448 |
| 122 | 3300005841 | Ga0068863_100052008 | Ga0068863_1000520082 | 448 |
| 123 | 3300005842 | Ga0068858_100022117 | Ga0068858_1000221175 | 448 |
| 124 | 3300005843 | Ga0068860_100093135 | Ga0068860_1000931352 | 448 |
| 125 | 3300006931 | Ga0097620_100138172 | Ga0097620_1001381722 | 448 |
| 126 | 3300025927 | Ga0207687_10049454 | Ga0207687_100494542 | 448 |
| 127 | 3300025938 | Ga0207704_10003314 | Ga0207704_100033149 | 448 |
| 128 | 3300025941 | Ga0207711_10024009 | Ga0207711_100240092 | 448 |
| 129 | 3300026035 | Ga0207703_10048919 | Ga0207703_100489191 | 448 |
| 130 | 3300026089 | Ga0207648_10191277 | Ga0207648_101912771 | 448 |
| 131 | 3300026121 | Ga0207683_10126599 | Ga0207683_101265992 | 448 |
| 132 | 3300028379 | Ga0268266_10032457 | Ga0268266_100324572 | 448 |
| 133 | 3300031727 | Ga0316576_10034947 | Ga0316576_100349472 | 448 |
| 134 | 3300031733 | Ga0316577_10050120 | Ga0316577_100501202 | 448 |
| 135 | 3300032168 | Ga0316593_10019325 | Ga0316593_100193252 | 448 |
| 136 | 3300032168 | Ga0316593_10031904 | Ga0316593_100319042 | 448 |
| 137 | 3300036712 | Ga0316584_0000470 | Ga0316584_0000470_9093_10478 | 448 |
| 138 | 3300049570 | Ga0501033_0038555 | Ga0501033_0038555_1373_2740 | 448 |
| 139 | 3300049575 | Ga0501039_0008666 | Ga0501039_0008666_1425_2792 | 448 |
| 140 | 3300049577 | Ga0501041_0002567 | Ga0501041_0002567_6679_8046 | 448 |
| 141 | 3300049582 | Ga0501048_0008525 | Ga0501048_0008525_2412_3779 | 448 |
| 142 | 3300049591 | Ga0501075_0001026 | Ga0501075_0001026_14359_15726 | 448 |
| 143 | 3300049591 | Ga0501075_0028934 | Ga0501075_0028934_1166_2533 | 448 |
| 144 | 3300049592 | Ga0501076_0000098 | Ga0501076_0000098_44759_46126 | 448 |
| 145 | 3300049592 | Ga0501076_0058572 | Ga0501076_0058572_1188_2555 | 448 |
| 146 | 3300049741 | Ga0501079_0010818 | Ga0501079_0010818_107_1474 | 448 |
| 147 | 3300049742 | Ga0501080_0001504 | Ga0501080_0001504_16622_17989 | 448 |
| 148 | 3300049743 | Ga0501081_0007806 | Ga0501081_0007806_494_1861 | 448 |
| 149 | 3300049824 | Ga0501045_0003259 | Ga0501045_0003259_4439_5806 | 448 |
| 150 | 3300060353 | Ga0501082_0021308 | Ga0501082_0021308_2715_4082 | 448 |
| 151 | 3300061734 | Ga0530510_0001520 | Ga0530510_0001520_7917_9284 | 448 |
| 152 | 3300005356 | Ga0070674_100012666 | Ga0070674_1000126665 | 449 |
| 153 | 3300005458 | Ga0070681_10129243 | Ga0070681_101292432 | 449 |
| 154 | 3300005539 | Ga0068853_100006756 | Ga0068853_10000675610 | 449 |
| 155 | 3300005545 | Ga0070695_100081682 | Ga0070695_1000816822 | 449 |
| 156 | 3300005577 | Ga0068857_100111761 | Ga0068857_1001117613 | 449 |
| 157 | 3300006048 | Ga0075363_100089613 | Ga0075363_1000896131 | 449 |
| 158 | 3300009098 | Ga0105245_10076196 | Ga0105245_100761962 | 449 |
| 159 | 3300009545 | Ga0105237_10036159 | Ga0105237_100361595 | 449 |
| 160 | 3300010375 | Ga0105239_10032553 | Ga0105239_100325532 | 449 |
| 161 | 3300013297 | Ga0157378_10016112 | Ga0157378_100161125 | 449 |
| 162 | 3300013308 | Ga0157375_10037573 | Ga0157375_100375734 | 449 |
| 163 | 3300025937 | Ga0207669_10011062 | Ga0207669_100110624 | 449 |
| 164 | 3300026041 | Ga0207639_10066311 | Ga0207639_100663112 | 449 |
| 165 | 3300026078 | Ga0207702_10044392 | Ga0207702_100443923 | 449 |
| 166 | 3300026089 | Ga0207648_10085807 | Ga0207648_100858072 | 449 |
| 167 | 3300026116 | Ga0207674_10016266 | Ga0207674_100162663 | 449 |
| 168 | 3300036401 | Ga0373937_0033522 | Ga0373937_0033522_98_1465 | 449 |
| 169 | 3300044712 | Ga0453684_0016029 | Ga0453684_0016029_1320_2693 | 449 |
| 170 | 3300045051 | Ga0451576_0011894 | Ga0451576_0011894_6808_8193 | 449 |
| 171 | 3300050493 | nmdc:mga0k408_101684_c1 | nmdc:mga0k408_101684_c1_209_1564 | 449 |
| 172 | 3300003792 | Ga0055540_1003336 | Ga0055540_10033365 | 450 |
| 173 | 3300003794 | Ga0055531_10002040 | Ga0055531_100020406 | 450 |
| 174 | 3300006844 | Ga0075428_100207399 | Ga0075428_1002073992 | 450 |
| 175 | 3300006852 | Ga0075433_10052118 | Ga0075433_100521182 | 450 |
| 176 | 3300025273 | Ga0209673_1019790 | Ga0209673_10197902 | 450 |
| 177 | 3300025303 | Ga0209051_1000114 | Ga0209051_100011481 | 450 |
| 178 | 3300025304 | Ga0209257_1000015 | Ga0209257_1000015708 | 450 |
| 179 | 3300048919 | Ga0496116_0066253 | Ga0496116_0066253_103_1455 | 450 |
| 180 | 3300050515 | nmdc:mga0a205_18225_c2 | nmdc:mga0a205_18225_c2_1006_2415 | 450 |
| 181 | 3300031665 | Ga0316575_10001539 | Ga0316575_100015393 | 452 |
| 182 | 3300035398 | Ga0316574_0002809 | Ga0316574_0002809_2139_3539 | 452 |
| 183 | iso_pu_bacteria | 639633007 | 639787926 | 452 |
| 184 | iso_pu_bacteria | 2765235838 | 2765571923 | 453 |
| 185 | iso_pu_bacteria | 2808606386 | 2808984667 | 453 |
| 186 | iso_pu_bacteria | 2808606415 | 2809132165 | 453 |
| 187 | iso_pu_bacteria | 2808606419 | 2809151697 | 453 |
| 188 | iso_pu_bacteria | 2839094727 | 2839095478 | 453 |
| 189 | iso_pu_bacteria | 2852618963 | 2852623051 | 453 |
| 190 | 3300005471 | Ga0070698_100025218 | Ga0070698_1000252182 | 454 |
| 191 | 3300005549 | Ga0070704_100025156 | Ga0070704_1000251565 | 454 |
| 192 | 3300009098 | Ga0105245_10016102 | Ga0105245_100161024 | 454 |
| 193 | 3300009176 | Ga0105242_10007510 | Ga0105242_100075109 | 454 |
| 194 | 3300025927 | Ga0207687_10033969 | Ga0207687_100339694 | 454 |
| 195 | 3300050510 | nmdc:mga06r32_10930_c1 | nmdc:mga06r32_10930_c1_3237_4634 | 454 |
| 196 | 3300049824 | Ga0501045_0028797 | Ga0501045_0028797_2372_3919 | 456 |
| 197 | 3300053125 | Ga0500618_003836 | Ga0500618_003836_967_2352 | 456 |
| 198 | 3300006178 | Ga0075367_10006046 | Ga0075367_100060466 | 457 |
| 199 | 3300035692 | Ga0373935_0042239 | Ga0373935_0042239_1275_2681 | 457 |
| 200 | 3300003751 | Ga0055538_1000049 | Ga0055538_10000492 | 460 |
| 201 | 3300046615 | Ga0495656_0072596 | Ga0495656_0072596_67_1479 | 460 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4bs1-assembly1.cif.gz_A-1 | mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition | 0.9702 | 312 | 380 |
| 5ep2-assembly1.cif.gz_A | quorum-sensing signal integrator luxo - catalytic domain in complex with azau inhibitor | 0.9696 | 138 | 378 |
| 6ifh-assembly1.cif.gz_A | unphosphorylated spo0f from paenisporosarcina sp. tg-14 | 0.9632 | 5 | 120 |
| 3jte-assembly1.cif.gz_A | crystal structure of response regulator receiver domain protein from clostridium thermocellum | 0.9599 | 5 | 120 |
| 4d6x-assembly1.cif.gz_A | crystal structure of the receiver domain of ntrx from brucella abortus | 0.9596 | 7 | 123 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0AFU4_307_384_1.10.8.60 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 0.9856 | 310 | 384 | 1.10.8.60 |
| af_Q06065_316_382_1.10.8.60 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 0.9825 | 310 | 374 | 1.10.8.60 |
| 1ny5B03 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 0.9791 | 312 | 380 | 1.10.8.60 |
| 5m7nA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9707 | 138 | 305 | 3.40.50.300 |
| af_P14375_1_129_3.40.50.2300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator | 0.969 | 5 | 121 | 3.40.50.2300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A485A0E4-F1-model_v4 | Transcriptional regulatory protein CreB | 0.968 | 5 | 81 |
GO:0000156
GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
| AF-A0A535PGL8-F1-model_v4 | Response regulator transcription factor | 0.9534 | 5 | 120 |
GO:0000156
GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
| AF-A0A4Q3UW49-F1-model_v4 | Response regulator transcription factor | 0.9477 | 5 | 83 |
GO:0000156
GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
| AF-A0A7V2LKS5-F1-model_v4 | Response regulator transcription factor | 0.9475 | 3 | 120 |
GO:0000156
GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
| AF-A0A0U5C9D4-F1-model_v4 | Response regulator PleD | 0.9474 | 1 | 120 |
GO:0000160
GO:0005886 GO:0043709 GO:0052621 GO:1902201 |
Predicted Structure (AlphaFold2)
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